Natural Selection, Variation, Adaptation, and Evolution: a Primer of Interrelated Concepts
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Relaxed Selection in the Wild
TREE-1109; No of Pages 10 Review Relaxed selection in the wild David C. Lahti1, Norman A. Johnson2, Beverly C. Ajie3, Sarah P. Otto4, Andrew P. Hendry5, Daniel T. Blumstein6, Richard G. Coss7, Kathleen Donohue8 and Susan A. Foster9 1 Department of Biology, University of Massachusetts, Amherst, MA 01003, USA 2 Department of Plant, Soil, and Insect Sciences, University of Massachusetts, Amherst, MA 01003, USA 3 Center for Population Biology, University of California, Davis, CA 95616, USA 4 Department of Zoology, University of British Columbia, Vancouver, BC V6T 1Z4, Canada 5 Redpath Museum and Department of Biology, McGill University, Montreal, QC H3A 2K6, Canada 6 Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA 90095, USA 7 Department of Psychology, University of California, Davis, CA 95616, USA 8 Department of Biology, Duke University, Durham, NC 02138, USA 9 Department of Biology, Clark University, Worcester, MA 01610, USA Natural populations often experience the weakening or are often less clear than typical cases of trait evolution. removal of a source of selection that had been important When an environmental change results in strong selection in the maintenance of one or more traits. Here we refer to on a trait from a known source, a prediction for trait these situations as ‘relaxed selection,’ and review recent evolution often follows directly from this fact [2]. When studies that explore the effects of such changes on traits such a strong source of selection is removed, however, no in their ecological contexts. In a few systems, such as the clear prediction emerges. Rather, the likelihood of various loss of armor in stickleback, the genetic, developmental consequences can only be understood by integrating the and ecological bases of trait evolution are being discov- remaining sources of selection and processes at all levels of ered. -
Biological Sciences 1
Biological Sciences 1 Biological Sciences Marine Biology The Marine Biology major provides students with a strong foundation in basic biological concepts such as genetics, ecology, cell biology and marine systems as well as chemistry and mathematics. The plan of study provides the opportunity to choose elective courses from a wide variety of courses offered at Auburn University. In addition, students are required to take summer courses offered at marine labs around the United States, including Dauphin Island Sea Lab and Gulf Coast Research Lab. Students are also encouraged to consider internships and undergraduate research. Marine Biology graduates are well-prepared for advanced study in any marine science area or employment with marine labs, various governmental and nongovernmental agencies involved with coastal management and conservation, and tourism. Microbial, Cellular and Molecular Biology The Microbial, Cellular and Molecular Biology major provides students with an excellent foundation in the areas of microbiology, cellular and molecular biology that emphasizes the understanding of life at the cellular and molecular level. The choice of a formal option within the major allows students to concentrate on a particular area of interest. Each option provides a wide variety of courses and opportunities for undergraduate research. Students selecting the Microbiology option will be well prepared for postgraduate work or career advancement in a number of areas including food, environmental and medical microbiology. Students selecting the Cell and Molecular Biology option would also be well prepared for postgraduate study or career advancement in any area of eukaryotic cell or molecular biology. Both options provide excellent preparation for students interested in biotechnology or professional programs in the health sciences. -
Transformations of Lamarckism Vienna Series in Theoretical Biology Gerd B
Transformations of Lamarckism Vienna Series in Theoretical Biology Gerd B. M ü ller, G ü nter P. Wagner, and Werner Callebaut, editors The Evolution of Cognition , edited by Cecilia Heyes and Ludwig Huber, 2000 Origination of Organismal Form: Beyond the Gene in Development and Evolutionary Biology , edited by Gerd B. M ü ller and Stuart A. Newman, 2003 Environment, Development, and Evolution: Toward a Synthesis , edited by Brian K. Hall, Roy D. Pearson, and Gerd B. M ü ller, 2004 Evolution of Communication Systems: A Comparative Approach , edited by D. Kimbrough Oller and Ulrike Griebel, 2004 Modularity: Understanding the Development and Evolution of Natural Complex Systems , edited by Werner Callebaut and Diego Rasskin-Gutman, 2005 Compositional Evolution: The Impact of Sex, Symbiosis, and Modularity on the Gradualist Framework of Evolution , by Richard A. Watson, 2006 Biological Emergences: Evolution by Natural Experiment , by Robert G. B. Reid, 2007 Modeling Biology: Structure, Behaviors, Evolution , edited by Manfred D. Laubichler and Gerd B. M ü ller, 2007 Evolution of Communicative Flexibility: Complexity, Creativity, and Adaptability in Human and Animal Communication , edited by Kimbrough D. Oller and Ulrike Griebel, 2008 Functions in Biological and Artifi cial Worlds: Comparative Philosophical Perspectives , edited by Ulrich Krohs and Peter Kroes, 2009 Cognitive Biology: Evolutionary and Developmental Perspectives on Mind, Brain, and Behavior , edited by Luca Tommasi, Mary A. Peterson, and Lynn Nadel, 2009 Innovation in Cultural Systems: Contributions from Evolutionary Anthropology , edited by Michael J. O ’ Brien and Stephen J. Shennan, 2010 The Major Transitions in Evolution Revisited , edited by Brett Calcott and Kim Sterelny, 2011 Transformations of Lamarckism: From Subtle Fluids to Molecular Biology , edited by Snait B. -
Plant Evolution an Introduction to the History of Life
Plant Evolution An Introduction to the History of Life KARL J. NIKLAS The University of Chicago Press Chicago and London CONTENTS Preface vii Introduction 1 1 Origins and Early Events 29 2 The Invasion of Land and Air 93 3 Population Genetics, Adaptation, and Evolution 153 4 Development and Evolution 217 5 Speciation and Microevolution 271 6 Macroevolution 325 7 The Evolution of Multicellularity 377 8 Biophysics and Evolution 431 9 Ecology and Evolution 483 Glossary 537 Index 547 v Introduction The unpredictable and the predetermined unfold together to make everything the way it is. It’s how nature creates itself, on every scale, the snowflake and the snowstorm. — TOM STOPPARD, Arcadia, Act 1, Scene 4 (1993) Much has been written about evolution from the perspective of the history and biology of animals, but significantly less has been writ- ten about the evolutionary biology of plants. Zoocentricism in the biological literature is understandable to some extent because we are after all animals and not plants and because our self- interest is not entirely egotistical, since no biologist can deny the fact that animals have played significant and important roles as the actors on the stage of evolution come and go. The nearly romantic fascination with di- nosaurs and what caused their extinction is understandable, even though we should be equally fascinated with the monarchs of the Carboniferous, the tree lycopods and calamites, and with what caused their extinction (fig. 0.1). Yet, it must be understood that plants are as fascinating as animals, and that they are just as important to the study of biology in general and to understanding evolutionary theory in particular. -
Sirenian Feeding Apparatus: Functional Morphology of Feeding Involving Perioral Bristles and Associated Structures
THE SIRENIAN FEEDING APPARATUS: FUNCTIONAL MORPHOLOGY OF FEEDING INVOLVING PERIORAL BRISTLES AND ASSOCIATED STRUCTURES By CHRISTOPHER DOUGLAS MARSHALL A DISSERTATION PRESENTED TO THE GRADUATE SCHOOL OF THE UNrVERSITY OF FLORIDA IN PARTIAL FULFILLMENT OF THE REOUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY UNIVERSITY OF FLORIDA 1997 DEDICATION to us simply as I dedicate this work to the memory of J. Rooker (known "Rooker") and to sirenian conservation. Rooker was a subject involved in the study during the 1993 sampling year at Lowry Park Zoological Gardens. Rooker died during the red tide event in May of 1996; approximately 140 other manatees also died. During his rehabilitation at Lowry Park Zoo, Rooker provided much information regarding the mechanism of manatee feeding and use of the perioral bristles. The "mortality incident" involving the red tide event in southwest Florida during the summer of 1996 should serve as a reminder that the Florida manatee population and the status of all sirenians is precarious. Although some estimates suggest that the Florida manatee population may be stable, annual mortality numbers as well as habitat degradation continue to increase. Sirenian conservation and research efforts must continue. ii ACKNOWLEDGMENTS Research involving Florida manatees required that I work with several different government agencies and private parks. The staff of the Sirenia Project, U.S. Geological Service, Biological Resources Division - Florida Caribbean Science Center has been most helpful in conducting the behavioral aspect of this research and allowed this work to occur under their permit (U.S. Fish and Wildlife Permit number PRT-791721). Numerous conversations regarding manatee biology with Dr. -
Construct a Plant Evolution Timeline
Constructing a Timeline of Plant Evolution Use this photo as a guide to creating an interactive timeline. Refer to Geologic Time Scale charts. A good resource is http://www.ucmp.berkeley.edu/help/timeform.php Use the “Plant Timeline Cards” found at the end of this document. Attach pictures with Velcro to allow for manipulation by students, and to “build” the timeline in increments. Teachers will need to find and print photos for “seed ferns” or omit that step in the timeline. Cut and paste the text below under each picture. Cyanobacteria: Also known as blue- Mosses: These have the first identifiable green algae, these are bacteria transport systems for water (xylem), and (prokaryotes – no nucleus) that can reproduce via spores, which encase sex photosynthesize. cells to prevent desiccation. They still need to live near water. First eukaryotes (cell nucleus): Scientist think that eukaryotes evolved via Hornworts: These developed the cuticle symbiosis, with one bacteria engulfing (waxy coating to prevent water loss) and another, but not digesting it. stomata (openings in the cuticle to allow Chloroplasts were originally for gas exchange.) All land plants except cyanobacteria engulfed by another liverworts have these two features. bacterium. Development of a true vascular system Anabaena: These water organisms allowed for better transport of water evolved from being unicellular to more and provided structural support for the complex, multicellular organisms. Their plant to grow taller. specialized cells help with nitrogen fixation. Club mosses: These were the first plants to have true leaves with veins. They also Stoneworts: Scientists think that developed roots as an anchoring system colonization of land occurred only once, to allow plant to grow taller. -
The Big Bloom—How Flowering Plants Changed the World
The Big Bloom—How Flowering Plants Changed the World Written by Michael Klesius Republished from the pages of National Geographic magazine -- July 2002 In the summer of 1973 sunflowers appeared in my father's vegetable garden. They seemed to sprout overnight in a few rows he had lent that year to new neighbors from California. Only six years old at the time, I was at first put off by these garish plants. Such strange and vibrant flowers seemed out of place among the respectable beans, peppers, spinach, and other vegetables we had always grown. Gradually, however, the brilliance of the sunflowers won me over. Their fiery halos relieved the green monotone that by late summer ruled the garden. I marveled at birds that clung upside down to the shaggy, gold disks, wings fluttering, looting the seeds. Sunflowers defined flowers for me that summer and changed my view of the world. Flowers have a way of doing that. They began changing the way the world looked almost as soon as they appeared on Earth about 130 million years ago, during the Cretaceous period. That's relatively recent in geologic time: If all Earth's history were compressed into an hour, flowering plants would exist for only the last 90 seconds. But once they took firm root about 100 million years ago, they swiftly diversified in an explosion of varieties that established most of the flowering plant families of the modern world. Today flowering plant species outnumber by twenty to one those of ferns and cone-bearing trees, or conifers, which had thrived for 200 million years before the first bloom appeared. -
Assessing Symbiont Extinction Risk Using Cophylogenetic Data 2 3 Jorge Doña1 and Kevin P
1 Assessing symbiont extinction risk using cophylogenetic data 2 3 Jorge Doña1 and Kevin P. Johnson1 4 5 1. Illinois Natural History Survey, Prairie Research Institute, University of Illinois at Urbana-Champaign, 6 1816 S. Oak St., Champaign, IL 61820, USA 7 8 *Corresponding authors: Jorge Doña & Kevin Johnson; e-mail: [email protected] & [email protected] 9 10 Abstract: Symbionts have a unique mode of life that has attracted the attention of ecologists and 11 evolutionary biologists for centuries. As a result of this attention, these disciplines have produced 12 a mature body of literature on host-symbiont interactions. In contrast, the discipline of symbiont 13 conservation is still in a foundational stage. Here, we aim to integrate methodologies on symbiont 14 coevolutionary biology with the perspective of conservation. We focus on host-symbiont 15 cophylogenies, because they have been widely used to study symbiont diversification history and 16 contain information on symbiont extinction. However, cophylogenetic information has never been 17 used nor adapted to the perspective of conservation. Here, we propose a new statistic, 18 “cophylogenetic extinction rate” (Ec), based on coevolutionary knowledge, that uses data from 19 event-based cophylogenetic analyses, and which could be informative to assess relative symbiont 20 extinction risks. Finally, we propose potential future research to further develop estimation of 21 symbiont extinction risk from cophylogenetic analyses and continue the integration of this existing 22 knowledge of coevolutionary biology and cophylogenetics into future symbiont conservation 23 studies and practices. 24 25 Keywords: coevolution, coextinction risk, conservation biology, cophylogenies, host-symbiont 26 interactions, parasites. -
Reaction Norms for the Study of Genotype- Environment Interaction for Growth and Indicator Traits of Sexual Precocity in Nellore Cattle
Reaction norms for the study of genotype- environment interaction for growth and indicator traits of sexual precocity in Nellore cattle M.V.A. Lemos, H.L.J. Chiaia, M.P. Berton, F.L.B. Feitosa, C. Aboujaoude, G.C. Venturini, H.N. Oliveira, L.G. Albuquerque and F. Baldi Departamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Jaboticabal, SP, Brasil Corresponding author: F. Baldi E-mail: [email protected] Genet. Mol. Res. 14 (2): 7151-7162 (2015) Received August 8, 2014 Accepted February 5, 2015 Published June 29. 2015 DOI http://dx.doi.org/10.4238/2015.June.29.9 ABSTRACT. The objective of this study was to quantify the magnitude of genotype-environment interaction (GxE) effects on age at first calving (AFC), scrotal circumference (SC), and yearling weight (YW) in Nellore cattle using reaction norms. For the study, 89,152 weight records of female and male Nellore animals obtained at yearling age were used. Genetic parameters were estimated with a single-trait random- regression model using Legendre polynomials as base functions. The heritability estimates were of low to medium magnitude for AFC (0.05 to 0.47) and of medium to high magnitude for SC (0.32 to 0.51) and YW (0.13 to 0.72), and increased as the environmental gradient became more favorable. The genetic correlation estimates ranged from 0.25 to 1.0 for AFC, from 0.71 to 1.0 for SC, and from 0.42 to 1.0 for YW. High Spearman correlation coefficients were obtained for the three traits, ranging from 0.97 to 0.99. -
Dioscorides De Materia Medica Pdf
Dioscorides de materia medica pdf Continue Herbal written in Greek Discorides in the first century This article is about the book Dioscorides. For body medical knowledge, see Materia Medica. De materia medica Cover of an early printed version of De materia medica. Lyon, 1554AuthorPediaus Dioscorides Strange plants RomeSubjectMedicinal, DrugsPublication date50-70 (50-70)Pages5 volumesTextDe materia medica in Wikisource De materia medica (Latin name for Greek work Περὶ ὕλης ἰατρικῆς, Peri hul's iatrik's, both means about medical material) is a pharmacopeia of medicinal plants and medicines that can be obtained from them. The five-volume work was written between 50 and 70 CE by Pedanius Dioscorides, a Greek physician in the Roman army. It was widely read for more than 1,500 years until it supplanted the revised herbs during the Renaissance, making it one of the longest of all natural history books. The paper describes many drugs that are known to be effective, including aconite, aloe, coloxinth, colocum, genban, opium and squirt. In all, about 600 plants are covered, along with some animals and minerals, and about 1000 medicines of them. De materia medica was distributed as illustrated manuscripts, copied by hand, in Greek, Latin and Arabic throughout the media period. From the sixteenth century, the text of the Dioscopide was translated into Italian, German, Spanish and French, and in 1655 into English. It formed the basis of herbs in these languages by such people as Leonhart Fuchs, Valery Cordus, Lobelius, Rembert Dodoens, Carolus Klusius, John Gerard and William Turner. Gradually these herbs included more and more direct observations, complementing and eventually displacing the classic text. -
"You Can't Make a Monkey out of Us": Galen and Genetics Versus Darwin
"You can't make a monkey out of us": Galen and genetics versus Darwin Diamandopoulos A. and Goudas P. Summary The views on the biological relationship between human and ape are polarized. O n e end is summarized by the axiom that "mon is the third chimpanzee", a thesis put forward in an indirect way initially by Charles Darwin in the 19 th century.The other is a very modern concept that although similar, the human and ape genomes are distinctly different. We have compared these t w o views on the subject w i t h the stance of the ancient medical w r i t e r Galen.There is a striking resemblance between current and ancient opinion on three key issues. Firstly, on the fact that man and apes are similar but not identical. Secondly, on the influence of such debates on fields much wider than biology.And finally, on the comparative usefulness of apes as a substitute for human anatomy and physiology studies. Resume Les points de vue concernant les liens biologiques existants entre etre humain et singe sont polarises selon une seule direction. A I'extreme, on pourrait resumer ce point de vue par I'axiome selon lequel « I'homme est le troisieme chimpanze ». Cette these fut indirectement soutenue par Charles Darwin, au I9eme siecle. L'autre point de vue est un concept tres moderne soutenant la similitude mais non I'identite entre les genomes de I'homme et du singe. Nous avons compare ces deux points de vue sur le sujet en mentionnant celui du medecin ecrivain Galien, dans I'Antiquite. -
Evolution Ofsenescence Under Positive Pleiotropy?
Why organisms age: Evolution ofsenescence under positive pleiotropy? Alexei A. Maklako, Locke Rowe and Urban Friberg Linköping University Post Print N.B.: When citing this work, cite the original article. Original Publication: Alexei A. Maklako, Locke Rowe and Urban Friberg, Why organisms age: Evolution ofsenescence under positive pleiotropy?, 2015, Bioessays, (37), 7, 802-807. http://dx.doi.org/10.1002/bies.201500025 Copyright: Wiley-VCH Verlag http://www.wiley-vch.de/publish/en/ Postprint available at: Linköping University Electronic Press http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-117545 1 Why organisms age: Evolution of senescence under positive pleiotropy? Alexei A. Maklakov1, Locke Rowe2 and Urban Friberg3,4 1Ageing Research Group, Department of Animal Ecology, Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden 2 Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks St., Toronto, ON, M5S 3G5, Canada 3Ageing Research Group, Department of Evolutionary Biology, Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden 4IFM Biology, AVIAN Behavioural Genomics and Physiology Group, Linköping University, Linköping, Sweden Corresponding author: Maklakov, A.A. ([email protected]) Keywords: Aging, life-history evolution, mutation accumulation, positive pleiotropy senescence 2 Abstract Two classic theories maintain that aging evolves either because of alleles whose deleterious effects are confined to late life or because of alleles with broad pleiotropic effects that increase early-life fitness at the expense of late-life fitness. However, empirical studies often reveal positive pleiotropy for fitness across age classes, and recent evidence suggests that selection on early-life fitness can decelerate aging and increase lifespan, thereby casting doubt on the current consensus.