Roger Tsien Papers
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The Pedersen Memorial Issue
springer.com Chemistry : Organic Chemistry The Pedersen Memorial Issue Foreword: Charles J. Pedersen (1904-1989), Nobel Laureate in Chemistry (1987) This issue is dedicated to the memory of the late Charles J. Pedersen in recognition of his outstanding contribution to scientific research, culminating in his discovery of crown ethers and their remarkable cation complexing properties and his receipt of the 1987 Nobel Prize in Chemistry. Charlie's origin and early years in Korea did not portend the creative work in chemistry which would characterize his later life. However, we can see in his early years the influence of his Norwegian father and Japanese mother who considered his formal education to be of utmost importance. At the age of eight, he was sent abroad to Japan for schooling, first at a convent school in Nagasaki, and two years later at a French-American preparatory school in Yokohama run by a Marianist order of Catholic priests and brothers. The latter group encouraged him to attend the order's University of Dayton in Ohio where he received a bachelors degree in Springer chemical engineering. Charlie's academic experiences, his employment with du Pont, and the Softcover reprint of the creative spark which he manifested at an early stage of his scientific career are detailed in the 1st original 1st ed. 1992, VI, paper in this issue by Herman Schroeder. Schroeder had a long-time association with Charlie at edition 406 p. du Pont as a co-worker, supervisor, and friend. His recollections provide insight into Charlie's creative mind. In addition, they make it clear that a long period of creative work preceded the accidental discovery of the first synthetic crown ether. -
What Use Is Chemistry?
2 Inspirational chemistry What use is chemistry? Index 1.1 1 sheet This activity is based on a Sunday Times article by Sir Harry Kroto, a Nobel prize winning chemist who discovered a new allotrope of carbon – buckminsterfullerene or ‘bucky balls’. The article appeared on November 28, 2004 and is reproduced overleaf as a background for teachers. The aim is to introduce students to the scope of modern chemistry and the impact that it has on their lives, even in areas that they may not think of as related to chemistry. An alternative exercise for more able students would be to research what was used before chemical scientists had produced a particular new product or material (eg silk or wool stockings before nylon, leather footballs before synthetics, grated carbolic soap before shampoo) and then to write about the difference it would make to their lives if they did not have the modern product. Students will need: ■ Plenty of old magazines and catalogues (Argos catalogues are good as virtually everything in them would not exist without modern chemistry) ■ Large sheets of sugar paper ■ Glue and scissors. It works well if students produce the poster in groups, but then do the written work by themselves. The activity could be set for homework. Inspirational chemistry 3 What use is chemistry? Some years ago I was delighted chemistry-related industries make a to receive an honorary degree £5 billion profit on a £50 billion from Exeter University turnover, the apparent government recognising my contributions to inaction over the looming disaster chemistry – especially the is scarcely credible. -
The 2016 Nobel Prize in Chemistry
Pure Appl. Chem. 2016; 88(10-11): 917–918 Editorial Hugh D. Burrows* and Richard M. Hartshorn* The 2016 Nobel Prize in Chemistry DOI 10.1515/pac-2016-2005 Keywords: Ben L. Feringa; Jean-Pierre Sauvage; J. Fraser Stoddart; Nobel Prize in Chemistry; 2016. Pure and Applied Chemistry warmly congratulates Jean-Pierre Sauvage (University of Strasbourg, France), Sir J. Fraser Stoddart (Northwestern University, Evanston, IL, USA), and Bernard (Ben) L. Feringa (Univer- sity of Groningen, the Netherlands) on their award of the 2016 Nobel Prize in Chemistry. The citation from the Royal Swedish Academy of Sciences states that the award is “for the design and synthesis of molecu- lar machines”. Their work encompasses a broad spectrum of Chemistry, from elegant synthetic studies of catenanes, rotaxanes and other formerly considered exotic molecules, through coordination chemistry, and electron transfer reactions, to molecular switches and rotors driven by light and other external sources. They have all participated actively in IUPAC endorsed meetings and conference series, including the IUPAC World Congress in Chemistry, IUPAC International Conferences on Organic Synthesis (ICOS), Physical Organic Chemistry (ICPOC), and Coordination Chemistry (ICCC), and IUPAC International Symposia on Macrocyclic Chemistry (ISMC), Organometallic Chemistry Directed Towards Organic Synthesis (OMCOS), Novel Aromatic Compounds (ISNA), Carbohydrate Chemistry (ICS), the Chemistry of Natural Products ISCNP), and Photo- chemistry. Pure Appl. Chem. publishes collections of papers based upon authoritative lectures presented at such IUPAC endorsed events, in addition to IUPAC Recommendations, and Technical Reports. We are very pleased to highlight the following publications from these three Nobel Laureates that have been published in Pure and Applied Chemistry as a result of their involvement in these conferences. -
Optical Inhibition of Larval Zebrafish Behaviour with Anion
Mohamed et al. BMC Biology (2017) 15:103 DOI 10.1186/s12915-017-0430-2 METHODOLOGY ARTICLE Open Access Optical inhibition of larval zebrafish behaviour with anion channelrhodopsins Gadisti Aisha Mohamed1, Ruey-Kuang Cheng1, Joses Ho2, Seetha Krishnan3, Farhan Mohammad4, Adam Claridge-Chang2,4 and Suresh Jesuthasan1,2,4* Abstract Background: Optical silencing of activity provides a way to test the necessity of neurons in behaviour. Two light-gated anion channels, GtACR1 and GtACR2, have recently been shown to potently inhibit activity in cultured mammalian neurons and in Drosophila. Here, we test the usefulness of these channels in larval zebrafish, using spontaneous coiling behaviour as the assay. Results: When the GtACRs were expressed in spinal neurons of embryonic zebrafish and actuated with blue or green light, spontaneous movement was inhibited. In GtACR1-expressing fish, only 3 μW/mm2 of light was sufficient to have an effect; GtACR2, which is poorly trafficked, required slightly stronger illumination. No inhibition was seen in non-expressing siblings. After light offset, the movement of GtACR-expressing fish increased, which suggested that termination of light- induced neural inhibition may lead to activation. Consistent with this, two-photon imaging of spinal neurons showed that blue light inhibited spontaneous activity in spinal neurons of GtACR1-expressing fish, and that the level of intracellular calcium increased following light offset. Conclusions: These results show that GtACR1 and GtACR2 can be used to optically inhibit neurons in larval zebrafish with high efficiency. The activity elicited at light offset needs to be taken into consideration in experimental design, although this property can provide insight into the effects of transiently stimulating a circuit. -
Imaging Thoughts - an Investigation of Neural Circuits Encoding Changes in Behavior in Zebrafish By
Imaging thoughts - an investigation of neural circuits encoding changes in behavior in zebrafish by Claire Oldfield A dissertation submitted in partial satisfaction of the requirement for the degree of Doctor of Philosophy in Neuroscience In the Graduate Division of the University of California, Berkeley Committee in charge: Professor Ehud Y. Isacoff, Chair Professor Dan E. Feldman Professor Marla Feller Professor Craig Miller Summer 2016 Abstract Imaging thoughts - an investigation of neural circuits encoding changes in behavior in zebrafish By Claire Oldfield Doctor of Philosophy in Neuroscience University of California, Berkeley Professor Ehud Isacoff, Chair Experience influences how we perceive the world, how we interact with our environment, and how we develop. In fact, almost all animals can modify their behavior as a result of experience. Psychologists have long distinguished between different forms of learning and memory, and later determined that they are encoded in distinct brain areas. Neuroscientists dating back to Santiago Ramón y Cajal suggested that learning and memory might be encoded as changes in synaptic connections between neurons, but it wasn’t until the second half of the 20th century that experimental evidence corroborated this idea. Specific firing patterns of neurons during learning results in strengthening or weakening of synapses, and morphological modifications that can lead to long lasting changes in neural circuits. The molecular mechanisms that drive these changes are remarkably conserved across vertebrates. However, understanding how synaptic plasticity is integrated at a network level remains a big challenge in neuroscience. Relatively few studies have focused on how neural circuits encode changes in behavior in a natural context. -
Chartered Status Charteredeverything You Need Tostatus Know Everything You Need to Know
Chartered Status CharteredEverything you need toStatus know Everything you need to know www.rsc.org/cchem www.rsc.org/cchem ‘The best of any profession is always chartered’ The RSC would like to thank its members (pictured top to bottom) Ben Greener, Pfizer, Elaine Baxter, Procter & Gamble, and Richard Sleeman, Mass Spec Analytical Ltd, for their participation and support . Chartered Status | 1 Contents About chartered status 3 Why become chartered? 3 What skills and experience do I need? 3 The professional attributes for a Chartered Chemist 5 Supporting you throughout the programme yThe Professional Development Programme 5 yThe Direct Programme 7 How to apply 7 Achieving Chartered Scientist status 8 Revalidation 8 The next step 8 Application form 9 2 | Chartered Status ‘Having a professionally recognised qualification will build my external credibility’ Elaine Baxter BSc PhD MRSC Procter & Gamble Elaine Baxter is a Senior Scientist at Procter & Gamble (P&G). Since joining the company, she has had roles in formulation, process and technology development in skin and shaving science. She graduated in 2001, before completing a PhD on synthetic inorganic chemistry of platinum dyes with applications in solar cells. Elaine is currently working towards Chartered Chemist status through the Professional Development Programme. Why do you want to achieve Chartered Chemist status? My role involves science communication with people such as dermatologists, academics and the media; having a professionally recognised qualification will build my external credibility with these professionals. How do you feel the programme has worked for you? Working towards achieving the attributes required for the CChem award has presented me with opportunities to share my industry knowledge and help others. -
Optogenetic Neuronal Silencing in Drosophila During Visual Processing Alex S
www.nature.com/scientificreports OPEN Optogenetic Neuronal Silencing in Drosophila during Visual Processing Alex S. Mauss , Christian Busch & Alexander Borst Optogenetic channels and ion pumps have become indispensable tools in neuroscience to manipulate Received: 26 April 2017 neuronal activity and thus to establish synaptic connectivity and behavioral causality. Inhibitory Accepted: 6 October 2017 channels are particularly advantageous to explore signal processing in neural circuits since they permit Published: xx xx xxxx the functional removal of selected neurons on a trial-by-trial basis. However, applying these tools to study the visual system poses a considerable challenge because the illumination required for their activation usually also stimulates photoreceptors substantially, precluding the simultaneous probing of visual responses. Here, we explore the utility of the recently discovered anion channelrhodopsins GtACR1 and GtACR2 for application in the visual system of Drosophila. We frst characterized their properties using a larval crawling assay. We further obtained whole-cell recordings from cells expressing GtACR1, which mediated strong and light-sensitive photocurrents. Finally, using physiological recordings and a behavioral readout, we demonstrate that GtACR1 enables the fast and reversible silencing of genetically targeted neurons within circuits engaged in visual processing. Genetically expressed optogenetic ion channels and pumps confer light sensitivity to neurons of interest, allow- ing to control their activity on demand1,2. Such techniques have become powerful means to establish neuronal connectivity as well as causal relationships between neuronal activity and behavior. Remote control of neuronal activity by light has many advantages: it is fast, reversible, easy to parameterize and applicable in intact behaving animals. However, it poses challenges for studies in visual systems, since here endogenous light-sensing cells, the photoreceptors, are also activated by light required for optogenetic control. -
A Striatal Interneuron Circuit for Continuous Target Pursuit
ARTICLE https://doi.org/10.1038/s41467-019-10716-w OPEN A striatal interneuron circuit for continuous target pursuit Namsoo Kim1, Haofang E. Li1, Ryan N. Hughes1, Glenn D.R. Watson1, David Gallegos2, Anne E. West 2, Il Hwan Kim3 & Henry H. Yin1,2 Most adaptive behaviors require precise tracking of targets in space. In pursuit behavior with a moving target, mice use distance to target to guide their own movement continuously. 1234567890():,; Here, we show that in the sensorimotor striatum, parvalbumin-positive fast-spiking inter- neurons (FSIs) can represent the distance between self and target during pursuit behavior, while striatal projection neurons (SPNs), which receive FSI projections, can represent self- velocity. FSIs are shown to regulate velocity-related SPN activity during pursuit, so that movement velocity is continuously modulated by distance to target. Moreover, bidirectional manipulation of FSI activity can selectively disrupt performance by increasing or decreasing the self-target distance. Our results reveal a key role of the FSI-SPN interneuron circuit in pursuit behavior and elucidate how this circuit implements distance to velocity transforma- tion required for the critical underlying computation. 1 Department of Psychology and Neuroscience, Duke University, Durham, NC 27708, USA. 2 Department of Neurobiology, Duke University, Durham, NC 27708, USA. 3 Department of Anatomy and Neurobiology, University of Tennessee Health and Science Center, Memphis, TN 27708, USA. Correspondence and requests for materials should be addressed to H.H.Y. (email: [email protected]) NATURE COMMUNICATIONS | (2019) 10:2715 | https://doi.org/10.1038/s41467-019-10716-w | www.nature.com/naturecommunications 1 ARTICLE NATURE COMMUNICATIONS | https://doi.org/10.1038/s41467-019-10716-w hether pursuing a prey or approaching a mate, natural pursuit performance: the worse the pursuit performance, the Wbehaviors often involve continuous tracking of targets more self-velocity lags self-target distance, as expected if distance in space. -
Pauling-Linus.Pdf
NATIONAL ACADEMY OF SCIENCES L I N U S C A R L P A U L I N G 1901—1994 A Biographical Memoir by J A C K D. D UNITZ Any opinions expressed in this memoir are those of the author(s) and do not necessarily reflect the views of the National Academy of Sciences. Biographical Memoir COPYRIGHT 1997 NATIONAL ACADEMIES PRESS WASHINGTON D.C. LINUS CARL PAULING February 28, 1901–August 19, 1994 BY JACK D. DUNITZ INUS CARL PAULING was born in Portland, Oregon, on LFebruary 28, 1901, and died at his ranch at Big Sur, California, on August 19, 1994. In 1922 he married Ava Helen Miller (died 1981), who bore him four children: Linus Carl, Peter Jeffress, Linda Helen (Kamb), and Edward Crellin. Pauling is widely considered the greatest chemist of this century. Most scientists create a niche for themselves, an area where they feel secure, but Pauling had an enormously wide range of scientific interests: quantum mechanics, crys- tallography, mineralogy, structural chemistry, anesthesia, immunology, medicine, evolution. In all these fields and especially in the border regions between them, he saw where the problems lay, and, backed by his speedy assimilation of the essential facts and by his prodigious memory, he made distinctive and decisive contributions. He is best known, perhaps, for his insights into chemical bonding, for the discovery of the principal elements of protein secondary structure, the alpha-helix and the beta-sheet, and for the first identification of a molecular disease (sickle-cell ane- mia), but there are a multitude of other important contri- This biographical memoir was prepared for publication by both The Royal Society of London and the National Academy of Sciences of the United States of America. -
Wide. Fast. Deep. Recent Advances in Multi-Photon Microscopy of in Vivo Neuronal Activity
TechSights Wide. Fast. Deep. Recent Advances in Multi- Photon Microscopy of in vivo Neuronal Activity https://doi.org/10.1523/JNEUROSCI.1527-18.2019 Cite as: J. Neurosci 2019; 10.1523/JNEUROSCI.1527-18.2019 Received: 2 March 2019 Revised: 27 September 2019 Accepted: 27 September 2019 This Early Release article has been peer-reviewed and accepted, but has not been through the composition and copyediting processes. The final version may differ slightly in style or formatting and will contain links to any extended data. Alerts: Sign up at www.jneurosci.org/alerts to receive customized email alerts when the fully formatted version of this article is published. Copyright © 2019 the authors 1 Wide. Fast. Deep. Recent Advances in Multi-Photon Microscopy of in vivo Neuronal Activity. 2 Abbreviated title: Recent Advances of in vivo Multi-Photon Microscopy 3 Jérôme Lecoq1, Natalia Orlova1, Benjamin F. Grewe2,3,4 4 1 Allen Institute for Brain Science, Seattle, USA 5 2 Institute of Neuroinformatics, UZH and ETH Zurich, Switzerland 6 3 Dept. of Electrical Engineering and Information Technology, ETH Zurich, Switzerland 7 4 Faculty of Sciences, University of Zurich, Switzerland 8 9 Corresponding author: Jérôme Lecoq, [email protected] 10 Number of pages: 24 11 Number of figures: 6 12 Number of tables: 1 13 Number of words for: 14 ● abstract: 196 15 ● introduction: 474 16 ● main text: 5066 17 Conflict of interest statement: The authors declare no competing financial interests. 18 Acknowledgments: We thank Kevin Takasaki and Peter Saggau (Allen Institute for Brain Science) for providing helpful 19 comments on the manuscript; we thank Bénédicte Rossi for providing scientific illustrations. -
The 2009 Lindau Nobel Laureate Meeting: Roger Y. Tsien, Chemistry 2008
Journal of Visualized Experiments www.jove.com Video Article The 2009 Lindau Nobel Laureate Meeting: Roger Y. Tsien, Chemistry 2008 Roger Y. Tsien1 1 URL: https://www.jove.com/video/1575 DOI: doi:10.3791/1575 Keywords: Cellular Biology, Issue 35, GFP, Green Fluorescent Protein, IFPs, jellyfish, PKA, Calmodulin Date Published: 1/13/2010 Citation: Tsien, R.Y. The 2009 Lindau Nobel Laureate Meeting: Roger Y. Tsien, Chemistry 2008. J. Vis. Exp. (35), e1575, doi:10.3791/1575 (2010). Abstract American biochemist Roger Tsien shared the 2008 Nobel Prize in Chemistry with Martin Chalfie and Osamu Shimomura for their discovery and development of the Green Fluorescent Protein (GFP). Tsien, who was born in New York in 1952 and grew up in Livingston New Jersey, began to experiment in the basement of the family home at a young age. From growing silica gardens of colorful crystallized metal salts to attempting to synthesize aspirin, these early experiments fueled what would become Tsien's lifelong interest in chemistry and colors. Tsien's first official laboratory experience was an NSF-supported summer research program in which he used infrared spectroscopy to examine how metals bind to thiocyanate, for which he was awarded a $10,000 scholarship in the Westinghouse Science Talent Search. Following graduation from Harvard in 1972, Tsien attended Cambridge University in England under a Marshall Scholarship. There he learned organic chemistry --a subject he'd hated as an undergraduate-- and looked for a way to synthesize dyes for imaging neuronal activity, generating BAPTA based optical calcium indicator dyes. Following the completion of his postdoctoral training at Cambridge in 1982, Tsien accepted a faculty position at the University of California, Berkeley. -
Optical Inhibition of Zebrafish Behavior with Anion Channelrhodopsins
bioRxiv preprint doi: https://doi.org/10.1101/158899; this version posted July 4, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Optical inhibition of zebrafish behavior with anion channelrhodopsins Gadisti Aisha Mohamed1, Ruey-Kuang Cheng1, Joses Ho2, Seetha Krishnan3, Farhan Mohammad4, Adam Claridge-Chang2, 4 and Suresh Jesuthasan1, 2 1. Lee Kong Chian School of Medicine, Nanyang Technological University, Singapore. 2. Institute of Molecular and Cell Biology, Singapore. 3. Graduate School for Integrative Sciences and Engineering, National University of Singapore. 4. Duke-NUS Medical School, Singapore Abstract In behavioral analysis, optical electrical silencing provides a way to test neu- ronal necessity. Two light-gated anion channels, GtACR1 and GtACR2, have recently been shown—in neuronal culture and in Drosophila—to inhibit neu- rons potently. Here, we test the usefulness of these channels in zebrafish. When the GtACRs were expressed in motor neurons and actuated with blue or green light, fish spontaneous movement was inhibited. In GtACR1-expressing fish, only 3 µW/mm2 of light was sufficient to have an effect; GtACR2, which is poorly trafficked, required stronger illumination. After light offset, GtACR- expressing fish movement increased; this suggested that termination of light- induced neural inhibition may lead to depolarization. Consistent with this, two-photon imaging of spinal neurons showed that intracellular calcium also increased following light offset. The activity elicited at light offset needs to be taken into consideration in experimental design, although this property may help provide insight into the effects of stimulating a circuit transiently.