Determinining the Suitable Stimuli Level Is However Not a Trivial Task
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Computational Neuroscience Meets Optogenetics: Unlocking the Brain’S Secrets
Health & Medicine ︱ Prof Simon Schultz and Dr Konstantin Nikolic Computational neuroscience meets optogenetics: Unlocking the brain’s secrets Working at the interface omposed of billions of specialised responsible for perception, action Simplified models allow researchers to study how the geometry of a neuron’s “dendritic tree” affects its ability to process information. between engineering and nerve cells (called neurons) wired and memory. But this is changing. neuroscience, Professor Simon C together in complex, intricate Schultz and Dr Konstantin webs, the brain is inherently challenging LET THERE BE LIGHT Nikolic at Imperial College to study. Neurons communicate with A powerful new tool (invented by Boyden of Neurotechnology and Director of SHEDDING LIGHT ON THE BRAIN AN INSIGHT INTO NEURONAL GAIN London are developing tools each other by transmitting electrical and and Deisseroth just a little over a decade the Imperial Centre of Excellence in Their innovative approach uses Using two biophysical models of to help us understand the chemical signals along neural circuits: ago) allows researchers to map the brain’s Neurotechnology, Dr Konstantin Nikolic, sophisticated two-photon microscopy, neurons, genetically-modified to include intricate workings of the brain. signals that vary both in space and time. connections, giving unprecedented Associate Professor in the Department optogenetics and electrophysiology two distinct light-sensitive proteins Combining a revolutionary Until now, technical limitations in the access to the workings of the brain. Its of Electrical and Electronic Engineering, to measure (and disturb) patterns of (called opsins): channelrhodopsin-2 technology – optogenetics available research methods to study the impressive resolution enables precise and Dr Sarah Jarvis are taking a unique neuronal activity in vivo (in living tissue). -
Implantable Microelectrodes on Soft Substrate with Nanostructured Active Surface for Stimulation and Recording of Brain Activities Valentina Castagnola
Implantable microelectrodes on soft substrate with nanostructured active surface for stimulation and recording of brain activities Valentina Castagnola To cite this version: Valentina Castagnola. Implantable microelectrodes on soft substrate with nanostructured active sur- face for stimulation and recording of brain activities. Micro and nanotechnologies/Microelectronics. Universite Toulouse III Paul Sabatier, 2014. English. tel-01137352 HAL Id: tel-01137352 https://hal.archives-ouvertes.fr/tel-01137352 Submitted on 31 Mar 2015 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. THÈSETHÈSE En vue de l’obtention du DOCTORAT DE L’UNIVERSITÉ DE TOULOUSE Délivré par : l’Université Toulouse 3 Paul Sabatier (UT3 Paul Sabatier) Présentée et soutenue le 18/12/2014 par : Valentina CASTAGNOLA Implantable Microelectrodes on Soft Substrate with Nanostructured Active Surface for Stimulation and Recording of Brain Activities JURY M. Frédéric MORANCHO Professeur d’Université Président de jury M. Blaise YVERT Directeur de recherche Rapporteur Mme Yael HANEIN Professeur d’Université Rapporteur M. Pascal MAILLEY Directeur de recherche Examinateur M. Christian BERGAUD Directeur de recherche Directeur de thèse Mme Emeline DESCAMPS Chargée de Recherche Directeur de thèse École doctorale et spécialité : GEET : Micro et Nanosystèmes Unité de Recherche : Laboratoire d’Analyse et d’Architecture des Systèmes (UPR 8001) Directeur(s) de Thèse : M. -
ECE 5070: Neuroengineering and Neuroprosthetics
ECE 5070: Neuroengineering and Neuroprosthetics Course Description An overview of the broad field of Neuroengineering for graduate and senior undergraduate students with engineering or neuroscience backgrounds. Focusing on neural interfaces and prostheses, this course covers from basic neurophysiology and computational neuronal models to advanced neural interfaces and prostheses currently being actively developed in the field. Transcript Abbreviation: Neur Eng & Prosth Grading Plan: Letter Grade Course Deliveries: Classroom Course Levels: Undergrad, Graduate Student Ranks: Junior, Senior, Masters, Doctoral Course Offerings: Autumn Flex Scheduled Course: Never Course Frequency: Even Years Course Length: 14 Week Credits: 3.0 Repeatable: No Time Distribution: 3.0 hr Lec Expected out-of-class hours per week: 6.0 Graded Component: Lecture Credit by Examination: No Admission Condition: No Off Campus: Never Campus Locations: Columbus Prerequisites and Co-requisites: Prereq: 3050 or BME 3703; or Neurosc 3010; or Grad standing in Engineering or Neurosc. Exclusions: Not open to students with credit for 5194.03 or Neurosc 5070. Cross-Listings: Cross-listed in Neurosc. Course Rationale: Introduce students a vibrant, interdisciplinary field which integrates engineering and neuroscience principles for treating neurological disorders. The course is required for this unit's degrees, majors, and/or minors: No The course is a GEC: No The course is an elective (for this or other units) or is a service course for other units: Yes Subject/CIP Code: 14.1001 Subsidy Level: Doctoral Course Programs Abbreviation Description CpE Computer Engineering EE Electrical Engineering Course Goals Master principles of neural interfaces. Be competent with computational neural models. Be competent with design of common neuroprostheses. -
Thenerveimpulse05.Pdf
The nerve impulse. INTRODUCTION Axons are responsible for the transmission of information between different points of the nervous system and their function is analogous to the wires that connect different points in an electric circuit. However, this analogy cannot be pushed very far. In an electrical circuit the wire maintains both ends at the same electrical potential when it is a perfect conductor or it allows the passage of an electron current when it has electrical resistance. As we will see in these lectures, the axon, as it is part of a cell, separates its internal medium from the external medium with the plasma membrane and the signal conducted along the axon is a transient potential difference1 that appears across this membrane. This potential difference, or membrane potential, is the result of ionic gradients due to ionic concentration differences across the membrane and it is modified by ionic flow that produces ionic currents perpendicular to the membrane. These ionic currents give rise in turn to longitudinal currents closing local ionic current circuits that allow the regeneration of the membrane potential changes in a different region of the axon. This process is a true propagation instead of the conduction phenomenon occurring in wires. To understand this propagation we will study the electrical properties of axons, which include a description of the electrical properties of the membrane and how this membrane works in the cylindrical geometry of the axon. Much of our understanding of the ionic mechanisms responsible for the initiation and propagation of the action potential (AP) comes from studies on the squid giant axon by A. -
Spatial Extent of Neurons: Dendrites and Axons
Spatial extent of neurons: dendrites and axons Morphological diversity of neurons Cortical pyramidal cell Purkinje cell Retinal ganglion cells Motoneurons Dendrites: spiny vs non-spiny Recording and simulating dendrites Axons - myelinated vs unmyelinated Axons - myelinated vs unmyelinated • Myelinated axons: – Long-range axonal projections (motoneurons, long-range cortico-cortical connections in white matter, etc) – Saltatory conduction; – Fast propagation (10s of m/s) • Unmyelinated axons: – Most local axonal projections – Continuous conduction – Slower propagation (a few m/s) Recording from axons Recording from axons Recording from axons - where is the spike generated? Modeling neuronal processes as electrical cables • Axial current flowing along a neuronal cable due to voltage gradient: V (x + ∆x; t) − V (x; t) = −Ilong(x; t)RL ∆x = −I (x; t) r long πa2 L where – RL: total resistance of a cable of length ∆x and radius a; – rL: specific intracellular resistivity • ∆x ! 0: πa2 @V Ilong(x; t) = − (x; t) rL @x The cable equation • Current balance in a cylinder of width ∆x and radius a • Axial currents leaving/flowing into the cylinder πa2 @V @V Ilong(x + ∆x; t) − Ilong(x; t) = − (x + ∆x; t) − (x; t) rL @x @x • Ionic current(s) flowing into/out of the cell 2πa∆xIion(x; t) • Capacitive current @V I (x; t) = 2πa∆xc cap M @t • Kirschoff law Ilong(x + ∆x; t) − Ilong(x; t) + 2πa∆xIion(x; t) + Icap(x; t) = 0 • In the ∆x ! 0 limit: @V a @2V cM = 2 − Iion @t 2rL @x Compartmental appoach Compartmental approach Modeling passive dendrites: Cable equation -
Structure and Function Relationship in Nerve Cells & Membrane Potential
Structure and Function Relationship in Nerve Cells & Membrane Potential Asist. Prof. Aslı AYKAÇ NEU Faculty of Medicine Biophysics Nervous System Cells • Glia – Not specialized for information transfer – Support neurons • Neurons (Nerve Cells) – Receive, process, and transmit information Neurons • Neuron Doctrine – The neuron is the functional unit of the nervous system • Specialized cell type – have very diverse in structure and function Neuron: Structure/Function • designed to receive, process, and transmit information – Dendrites: receive information from other neurons – Soma: “cell body,” contains necessary cellular machinery, signals integrated prior to axon hillock – Axon: transmits information to other cells (neurons, muscles, glands) • Information travels in one direction – Dendrite → soma → axon How do neurons work? • Function – Receive, process, and transmit information – Conduct unidirectional information transfer • Signals – Chemical – Electrical Membrane Potential Because of motion of positive and negative ions in the body, electric current generated by living tissues. What are these electrical signals? • receptor potentials • synaptic potentials • action potentials Why are these electrical signals important? These signals are all produced by temporary changes in the current flow into and out of cell that drives the electrical potential across the cell membrane away from its resting value. The resting membrane potential The electrical membrane potential across the membrane in the absence of signaling activity. Two type of ions channels in the membrane – Non gated channels: always open, important in maintaining the resting membrane potential – Gated channels: open/close (when the membrane is at rest, most gated channels are closed) Learning Objectives • How transient electrical signals are generated • Discuss how the nongated ion channels establish the resting potential. -
New Technologies for Human Robot Interaction and Neuroprosthetics
University of Plymouth PEARL https://pearl.plymouth.ac.uk Faculty of Science and Engineering School of Engineering, Computing and Mathematics 2017-07-01 Human-Robot Interaction and Neuroprosthetics: A review of new technologies Cangelosi, A http://hdl.handle.net/10026.1/9872 10.1109/MCE.2016.2614423 IEEE Consumer Electronics Magazine All content in PEARL is protected by copyright law. Author manuscripts are made available in accordance with publisher policies. Please cite only the published version using the details provided on the item record or document. In the absence of an open licence (e.g. Creative Commons), permissions for further reuse of content should be sought from the publisher or author. CEMAG-OA-0004-Mar-2016.R3 1 New Technologies for Human Robot Interaction and Neuroprosthetics Angelo Cangelosi, Sara Invitto Abstract—New technologies in the field of neuroprosthetics and These developments in neuroprosthetics are closely linked to robotics are leading to the development of innovative commercial the recent significant investment and progress in research on products based on user-centered, functional processes of cognitive neural networks and deep learning approaches to robotics and neuroscience and perceptron studies. The aim of this review is to autonomous systems [2][3]. Specifically, one key area of analyze this innovative path through the description of some of the development has been that of cognitive robots for human-robot latest neuroprosthetics and human-robot interaction applications, in particular the Brain Computer Interface linked to haptic interaction and assistive robotics. This concerns the design of systems, interactive robotics and autonomous systems. These robot companions for the elderly, social robots for children with issues will be addressed by analyzing developmental robotics and disabilities such as Autism Spectrum Disorders, and robot examples of neurorobotics research. -
Brain-Machine Interface: from Neurophysiology to Clinical
Neurophysiology of Brain-Machine Interface Rehabilitation Matija Milosevic, Osaka University - Graduate School of Engineering Science - Japan. Abstract— Long-lasting cortical re-organization or II. METHODS neuroplasticity depends on the ability to synchronize the descending (voluntary) commands and the successful execution Stimulation of muscles with FES was delivered using a of the task using a neuroprosthetic. This talk will discuss the constant current biphasic waveform with a 300μs pulse width neurophysiological mechanisms of brain-machine interface at 50 Hz frequency via surface electrodes. First, repetitive (BMI) controlled neuroprosthetics with the aim to provide transcranial magnetic stimulation (rTMS) intermittent theta implications for development of technologies for rehabilitation. burst protocol (iTBS) was used to induce cortical facilitation. iTBS protocol consists of pulses delivered intermittently at a I. INTRODUCTION frequency of 50 Hz and 5 Hz for a total of 200 seconds. Functional electrical stimulation (FES) neuroprosthetics Moreover, motor imagery protocol was used to display a can be used to applying short electric impulses over the virtual reality hand opening and closing sequence of muscles or the nerves to generate hand muscle contractions movements (hand flexion/extension) while subject’s hands and functional movements such as reaching and grasping. remained at rest and out of the visual field. Our work has shown that recruitment of muscles using FES goes beyond simple contractions, with evidence suggesting III. RESULTS re-organization of the spinal reflex networks and cortical- Our first results showed that motor imagery can affect level changes after the stimulating period [1,2]. However, a major challenge remains in achieving precise temporal corticospinal facilitation in a phase-dependent manner, i.e., synchronization of voluntary commands and activation of the hand flexor muscles during hand closing and extensor muscles [3]. -
The Myelin-Forming Cells of the Nervous System (Oligodendrocytes and Schwann Cells)
The Myelin-Forming Cells of the Nervous System (oligodendrocytes and Schwann cells) Oligodendrocyte Schwann Cell Oligodendrocyte function Saltatory (jumping) nerve conduction Oligodendroglia PMD PMD Saltatory (jumping) nerve conduction Investigating the Myelinogenic Potential of Individual Oligodendrocytes In Vivo Sparse Labeling of Oligodendrocytes CNPase-GFP Variegated expression under the MBP-enhancer Cerebral Cortex Corpus Callosum Cerebral Cortex Corpus Callosum Cerebral Cortex Caudate Putamen Corpus Callosum Cerebral Cortex Caudate Putamen Corpus Callosum Corpus Callosum Cerebral Cortex Caudate Putamen Corpus Callosum Ant Commissure Corpus Callosum Cerebral Cortex Caudate Putamen Piriform Cortex Corpus Callosum Ant Commissure Characterization of Oligodendrocyte Morphology Cerebral Cortex Corpus Callosum Caudate Putamen Cerebellum Brain Stem Spinal Cord Oligodendrocytes in disease: Cerebral Palsy ! CP major cause of chronic neurological morbidity and mortality in children ! CP incidence now about 3/1000 live births compared to 1/1000 in 1980 when we started intervening for ELBW ! Of all ELBW {gestation 6 mo, Wt. 0.5kg} , 10-15% develop CP ! Prematurely born children prone to white matter injury {WMI}, principle reason for the increase in incidence of CP ! ! 12 Cerebral Palsy Spectrum of white matter injury ! ! Macro Cystic Micro Cystic Gliotic Khwaja and Volpe 2009 13 Rationale for Repair/Remyelination in Multiple Sclerosis Oligodendrocyte specification oligodendrocytes specified from the pMN after MNs - a ventral source of oligodendrocytes -
Practical and Ethical Issues at the Intersection of Brain Science and Society
Emerging Neurotechnologies: Practical and Ethical Issues at the Intersection of Brain Science and Society James Giordano PhD Departments of Neurology and Biochemistry Neuroethics Studies Program, Pellegrino Center for Clinical Bioethics Georgetown University Medical Center Washington, DC, USA and EU-Human Brain Project SP-12 Uppsala University, Sweden Neuroscience… • Huge leaps using technology to study and understand how nervous systems and brains are structured and function. Allowed understanding at certain levels of causality: – Formal: Overall “workings” of biological systems – Material: Structure and functional roles of neurons, glia But not at others… – Efficient: How “grey stuff” actually makes “great stuff” – Final: For what? To what “ends”? Core Questions... What do we do with the information and capability we have? What do we do about the information and capability we don’t? Questions toward Innovation • Tools to Theory • Theory to Tools... ...to Theory AISC Approach Brain Science on the World Stage • EU Human Brain Project • US BRAIN initiative • China Brain Project • Japan Brain Project • Global NeuroS/T Economic Predictions 2025 – Asia – US/Western Europe – South America Neuroscience and Technologies (NeuroS/T) • Assessment – Biomarkers – Genetics/genomics – Imaging – Brain modeling/mapping • Interventional – Technopharmaceutics – P-Stim – Neurofeedback – Transcranial Modulation – Deep Brain Stimulation – BCI – Neuroprosthetics • Derivative – -Artificial neural networks – -AI technologies A-3: Actual Ability to Assess...Access...Affect To What Effect(s) and Ends? Neuroimaging – PET – CT – MR – fMR – DTI – MEG/qEEG Can we Scan the Brain to Depict Consciousness and/or “Read” Minds? text copyright, J. Giordano, 2014 Neurogenetics – Genotyping – Phenotyping – Proteomics – Genetic Intervention(s) Can we “Predict” or “Create” Present and Future “Selves”? text copyright, J. -
Gathering at the Nodes
RESEARCH HIGHLIGHTS GLIA Gathering at the nodes Saltatory conduction — the process by which that are found at the nodes of Ranvier, where action potentials propagate along myelinated they interact with Na+ channels. When the nerves — depends on the fact that voltage- authors either disrupted the localization of gated Na+ channels form clusters at the nodes gliomedin by using a soluble fusion protein of Ranvier, between sections of the myelin that contained the extracellular domain of sheath. New findings from Eshed et al. show neurofascin, or used RNA interference to that Schwann cells produce a protein called suppress the expression of gliomedin, the gliomedin, and that this is responsible for characteristic clustering of Na+ channels at the clustering of these channels. the nodes of Ranvier did not occur. The formation of the nodes of Ranvier is Aggregation of the domain of gliomedin specified by the myelinating cells, not the that binds neurofascin and NrCAM on the axons, and an important component of this surface of purified neurons also caused process in the peripheral nervous system the clustering of neurofascin, Na+ channels is the extension of microvilli by Schwann and other nodal proteins. These findings cells. These microvilli contact the axons at support a model in which gliomedin on the nodes, and it is here that the Schwann References and links Schwann cell microvilli binds to neurofascin ORIGINAL RESEARCH PAPER Eshed, Y. et al. Gliomedin cells express the newly discovered protein and NrCAM on axons, causing them to mediates Schwann cell–axon interaction and the molecular gliomedin. cluster at the nodes of Ranvier, and leading assembly of the nodes of Ranvier. -
New Plasmon-Polariton Model of the Saltatory Conduction
bioRxiv preprint doi: https://doi.org/10.1101/2020.01.17.910596; this version posted January 20, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Manuscript submitted to BiophysicalJournal Article New plasmon-polariton model of the saltatory conduction W. A. Jacak1,* ABSTRACT We propose a new model of the saltatory conduction in myelinated axons. This conduction of the action potential in myelinated axons does not agree with the conventional cable theory, though the latter has satisfactorily explained the electro- signaling in dendrites and in unmyelinated axons. By the development of the wave-type concept of ionic plasmon-polariton kinetics in axon cytosol we have achieved an agreement of the model with observed properties of the saltatory conduction. Some resulting consequences of the different electricity model in the white and the gray matter for nervous system organization have been also outlined. SIGNIFICANCE Most of axons in peripheral nervous system and in white matter of brain and spinal cord are myelinated with the action potential kinetics speed two orders greater than in dendrites and in unmyelinated axons. A decrease of the saltatory conduction velocity by only 10% ceases body functioning. Conventional cable theory, useful for dendrites and unmyelinated axon, does not explain the saltatory conduction (discrepancy between the speed assessed and the observed one is of one order of the magnitude). We propose a new nonlocal collective mechanism of ion density oscillations synchronized in the chain of myelinated segments of plasmon-polariton type, which is consistent with observations.