The Exciting Potential and Remaining Uncertainties of Genetic Rescue
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Genetic and Demographic Dynamics of Small Populations of Silene Latifolia
Heredity (2003) 90, 181–186 & 2003 Nature Publishing Group All rights reserved 0018-067X/03 $25.00 www.nature.com/hdy Genetic and demographic dynamics of small populations of Silene latifolia CM Richards, SN Emery and DE McCauley Department of Biological Sciences, Vanderbilt University, PO Box 1812, Station B, Nashville, TN 37235, USA Small local populations of Silene alba, a short-lived herbac- populations doubled in size between samples, while others eous plant, were sampled in 1994 and again in 1999. shrank by more than 75%. Similarly, expected heterozygosity Sampling included estimates of population size and genetic and allele number increased by more than two-fold in diversity, as measured at six polymorphic allozyme loci. individual populations and decreased by more than three- When averaged across populations, there was very little fold in others. When population-specific change in number change between samples (about three generations) in and change in measures of genetic diversity were considered population size, measures of within-population genetic together, significant positive correlations were found be- diversity such as number of alleles or expected hetero- tween the demographic and genetic variables. It is specu- zygosity, or in the apportionment of genetic diversity within lated that some populations were released from the and among populations as measured by Fst. However, demographic consequences of inbreeding depression by individual populations changed considerably, both in terms gene flow. of numbers of individuals and genetic composition. Some Heredity (2003) 90, 181–186. doi:10.1038/sj.hdy.6800214 Keywords: genetic diversity; demography; inbreeding depression; gene flow Introduction 1986; Lynch et al, 1995), the interaction of genetics and demography could also influence population persistence How genetics and demography interact to influence in common species, because it is generally accepted that population viability has been a long-standing question in even many abundant species are not uniformly distrib- conservation biology. -
Inbreeding Effects in Wild Populations
230 Review TRENDS in Ecology & Evolution Vol.17 No.5 May 2002 43 Putz, F.E. (1984) How trees avoid and shed lianas. estimate of total aboveground biomass for an neotropical forest of French Guiana: spatial and Biotropica 16, 19–23 eastern Amazonian forest. J. Trop. Ecol. temporal variability. J. Trop. Ecol. 17, 79–96 44 Appanah, S. and Putz, F.E. (1984) Climber 16, 327–335 52 Pinard, M.A. and Putz, F.E. (1996) Retaining abundance in virgin dipterocarp forest and the 48 Fichtner, K. and Schulze, E.D. (1990) Xylem water forest biomass by reducing logging damage. effect of pre-felling climber cutting on logging flow in tropical vines as measured by a steady Biotropica 28, 278–295 damage. Malay. For. 47, 335–342 state heating method. Oecologia 82, 350–361 53 Chai, F.Y.C. (1997) Above-ground biomass 45 Laurance, W.F. et al. (1997) Biomass collapse in 49 Restom, T.G. and Nepstad, D.C. (2001) estimation of a secondary forest in Sarawak. Amazonian forest fragments. Science Contribution of vines to the evapotranspiration of J. Trop. For. Sci. 9, 359–368 278, 1117–1118 a secondary forest in eastern Amazonia. Plant 54 Putz, F.E. (1983) Liana biomass and leaf area of a 46 Meinzer, F.C. et al. (1999) Partitioning of soil Soil 236, 155–163 ‘terra firme’ forest in the Rio Negro basin, water among canopy trees in a seasonally dry 50 Putz, F.E. and Windsor, D.M. (1987) Liana Venezuela. Biotropica 15, 185–189 tropical forest. Oecologia 121, 293–301 phenology on Barro Colorado Island, Panama. -
Equilibrium Theory of Island Biogeography: a Review
Equilibrium Theory of Island Biogeography: A Review Angela D. Yu Simon A. Lei Abstract—The topography, climatic pattern, location, and origin of relationship, dispersal mechanisms and their response to islands generate unique patterns of species distribution. The equi- isolation, and species turnover. Additionally, conservation librium theory of island biogeography creates a general framework of oceanic and continental (habitat) islands is examined in in which the study of taxon distribution and broad island trends relation to minimum viable populations and areas, may be conducted. Critical components of the equilibrium theory metapopulation dynamics, and continental reserve design. include the species-area relationship, island-mainland relation- Finally, adverse anthropogenic impacts on island ecosys- ship, dispersal mechanisms, and species turnover. Because of the tems are investigated, including overexploitation of re- theoretical similarities between islands and fragmented mainland sources, habitat destruction, and introduction of exotic spe- landscapes, reserve conservation efforts have attempted to apply cies and diseases (biological invasions). Throughout this the theory of island biogeography to improve continental reserve article, theories of many researchers are re-introduced and designs, and to provide insight into metapopulation dynamics and utilized in an analytical manner. The objective of this article the SLOSS debate. However, due to extensive negative anthropo- is to review previously published data, and to reveal if any genic activities, overexploitation of resources, habitat destruction, classical and emergent theories may be brought into the as well as introduction of exotic species and associated foreign study of island biogeography and its relevance to mainland diseases (biological invasions), island conservation has recently ecosystem patterns. become a pressing issue itself. -
Translocations and the 'Genetic Rescue' of Bottlenecked Populations
Translocations and the ‘genetic rescue’ of bottlenecked populations ATHESIS SUBMITTED IN PARTIAL FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY IN WILDLIFE CONSERVATION AT THE UNIVERSITY OF CANTERBURY SOL HEBER SEPTEMBER 2012 Abstract Many species around the world have passed through severe population bottlenecks due to an- thropogenic influences such as habitat loss or fragmentation, the introduction of exotic predators, pollution and excessive hunting. Severe bottlenecks are expected to lead to increased inbreed- ing depression and the loss of genetic diversity, and hence reduce the long-term viability of post- bottlenecked populations. The objective of this thesis was to examine both the consequences of severe bottlenecks and the use of translocations to ameliorate the effects of inbreeding due to bot- tlenecks. Given the predicted increase in probability of inbreeding in smaller populations, one would expect inbreeding depression to increase as the size of a population bottleneck decreases. Deter- mining the generality of such a relationship is critical to conservation efforts aimed at minimising inbreeding depression among threatened species. I therefore investigated the relationship between bottleneck size and population viability using hatching failure as a fitness measure in a sample of threatened bird species worldwide. Bottleneck size had a significant negative effect on hatch- ing failure, and this relationship held when controlling for confounding effects of phylogeny, body size, clutch size, time since bottleneck, and latitude. All species passing through bottlenecks of ∼100–150 individuals exhibited increased hatching failure. My results confirm that the negative consequences of bottlenecks on hatching success are widespread, and highlight the need for conser- vation managers to prevent severe bottlenecks. -
Central Concepts and Issues of Landscape Ecology
1 Central Concepts and Issues of Landscape Ecology JOHN A. H ••• the grand challenge is to forge a conceptual and theoretical ogy, embracing in one manner or another individual responses and population dynamics, and explaining patterns in species abundance caused by complex landscapes and patterns driven by complex dynamics" (Hanski 1999:264). 1.1 Introduction The objective of biological conservation is the long-term maintenance of popula tions or species or, more broadly, of the Earth's biodiversity. Many of the threats that elicit conservation concern result in one way or another from human land use. Population sizes may become prccariously small when suitablc habitat is lost or becomes spatially fragmented, increasing the likelihood of extinction. ChangeI'> in land cover may affect interactions between predator and prey or parasite and host populations. The spread of invasive or exotic species, disease, or distur bances such as fire may be enhanced by shifts in the distribution of natural, agri cultural, or urbanized areas. The inful'>ion of pollutants into aquatic ecosystems from terrestrial sources such as agriculture may be enhanced or reduced by the characteristics of the landscape between source and end point. Virtually all con servation issues are ultimately land-use issues. Landscape ecology deals with the causes and consequences of the spatial com position and configuration of landscape mosaics. Because changes in land use alter landscape composition and configuration, landscape ecology and biological conservation are obviously closely linked. Both landscape ecology and conserva tion biology are relatively young disciplines, however, so this conceptual mar riage has yet to be fully consurmnated. -
The Alluring Simplicity and Complex Reality of Genetic Rescue
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Publications, Agencies and Staff of the U.S. Department of Commerce U.S. Department of Commerce 9-2004 The alluring simplicity and complex reality of genetic rescue David A. Tallmon University of Alaska Southeast, [email protected] Gordon Luikart University of Montana, [email protected] Robin Waples NOAA, [email protected] Follow this and additional works at: https://digitalcommons.unl.edu/usdeptcommercepub Tallmon, David A.; Luikart, Gordon; and Waples, Robin, "The alluring simplicity and complex reality of genetic rescue" (2004). Publications, Agencies and Staff of the U.S. Department of Commerce. 480. https://digitalcommons.unl.edu/usdeptcommercepub/480 This Article is brought to you for free and open access by the U.S. Department of Commerce at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Publications, Agencies and Staff of the U.S. Department of Commerce by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Review TRENDS in Ecology and Evolution Vol.19 No.9 September 2004 The alluring simplicity and complex reality of genetic rescue David A. Tallmon1, Gordon Luikart1 and Robin S. Waples2 aLaboratoire d’Ecologie Alpine, Ge´nomique des Populations et Biodiversite´, CNRS UMR 5553, Universite´Joseph Fourier, BP 53, 38041 Grenoble, Cedex 09, France bNational Marine Fisheries Service, Northwest Fisheries Science Center, 2725 Montlake Boulevard East, Seattle, WA 98112, USA A series of important new theoretical, experimental and yet crucial role in the evolution of small natural observational studies demonstrate that just a few populations and can, under some circumstances, be an immigrants can have positive immediate impacts on effective conservation tool. -
Reviewing the Consequences of Genetic Purging on the Success of Rescue 3 Programs
bioRxiv preprint doi: https://doi.org/10.1101/2021.07.15.452459; this version posted July 15, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Authors: Noelia Pérez-Pereiraa, Armando Caballeroa and Aurora García-Doradob 2 Article title: Reviewing the consequences of genetic purging on the success of rescue 3 programs 4 5 6 a Centro de Investigación Mariña, Universidade de Vigo, Facultade de Bioloxía, 36310 Vigo, 7 Spain. 8 9 b Departamento de Genética, Fisiología y Microbiología, Universidad Complutense, Facultad 10 de Biología, 28040 Madrid, Spain. 11 12 13 Corresponding author: Aurora García-Dorado. Departamento de Genética, Fisiología y 14 Microbiología, Universidad Complutense, Facultad de Biología, 28040 Madrid, Spain. 15 Email address: [email protected] 16 17 ORCID CODES: 18 Noelia Pérez-Pereira: 0000-0002-4731-3712 19 Armando Caballero: 0000-0001-7391-6974 20 Aurora García-Dorado: 0000-0003-1253-2787 21 22 23 24 25 26 27 28 29 30 1 bioRxiv preprint doi: https://doi.org/10.1101/2021.07.15.452459; this version posted July 15, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 31 DECLARATIONS: 32 Funding: This work was funded by Agencia Estatal de Investigación (AEI) (PGC2018- 33 095810-B-I00 and PID2020-114426GB-C21), Xunta de Galicia (GRC, ED431C 2020-05) 34 and Centro singular de investigación de Galicia accreditation 2019-2022, and the European 35 Union (European Regional Development Fund - ERDF), Fondos Feder “Unha maneira de 36 facer Europa”. -
Genetic Mixing for Population Management: from Genetic Rescue to Provenancing
Received: 20 August 2020 | Revised: 10 October 2020 | Accepted: 14 October 2020 DOI: 10.1111/eva.13154 REVIEWS AND SYNTHESES Genetic mixing for population management: From genetic rescue to provenancing Ary A. Hoffmann1 | Adam D. Miller2,3 | Andrew R. Weeks1,4 1School of BioSciences, Bio21 Institute, The University of Melbourne, Parkville, Vic., Abstract Australia Animal and plant species around the world are being challenged by the deleterious 2 School of Life and Environmental Sciences, effects of inbreeding, loss of genetic diversity, and maladaptation due to widespread Centre for Integrative Ecology, Deakin University, Warrnambool, Vic., Australia habitat destruction and rapid climate change. In many cases, interventions will likely 3Deakin Genomics Centre, Deakin be needed to safeguard populations and species and to maintain functioning eco- University, Geelong, Vic., Australia systems. Strategies aimed at initiating, reinstating, or enhancing patterns of gene 4cesar Pty Ltd, Parkville, Vic., Australia flow via the deliberate movement of genotypes around the environment are gen- Correspondence erating growing interest with broad applications in conservation and environmental Ary A. Hoffmann, School of BioSciences, Bio21 Institute, The University of management. These diverse strategies go by various names ranging from genetic or Melbourne, Parkville, Vic., Australia. evolutionary rescue to provenancing and genetic resurrection. Our aim here is to Email: [email protected] provide some clarification around terminology and to how these strategies are con- nected and linked to underlying genetic processes. We draw on case studies from the literature and outline mechanisms that underlie how the various strategies aim to increase species fitness and impact the wider community. We argue that under- standing mechanisms leading to species decline and community impact is a key to successful implementation of these strategies. -
Preserving Evolutionary Potential: the Role of Genetic Rescue Jill Hamilton North Dakota State University Genetic Consequences of Rarity
Preserving evolutionary potential: the role of genetic rescue Jill Hamilton North Dakota State University Genetic consequences of rarity Genetic Demographic variation variation Inbreeding depression Population growth rate Outbreeding depression Reproductive rates Ne Evolutionary Potential? Environmental variation Fluctuations Disease Stress How might genetic rescue impact a species evolutionary potential? Natural or facilitated introduction of genetic variation from unrelated individuals with an aim to increase population fitness Environmental change Extinction threshold (Hamilton and Miller 2016, Conservation Biology) Maladaptation to changing conditions could lead to extinction Environmental change Extinction threshold Maladaptation Extinction (Hamilton and Miller 2016, Conservation Biology) Evolutionary rescue from standing genetic variation Environmental change Rescue via standing variation Extinction threshold Maladaptation Extinction (Hamilton and Miller 2016, Conservation Biology) Gene flow reduces demographic consequences of maladaptation Environmental change Introduction Rescue via gene flow * of variation Rescue via standing variation Extinction threshold Maladaptation Extinction (Hamilton and Miller 2016, Conservation Biology) One of the rarest pine species in the world, Torrey pine is restricted to one mainland and one island population Santa Rosa Island an expanding population Torrey Pines State Reserve abiotic and biotic challenges Genetics: exceptionally low levels of genetic diversity in a conifer • 59 allozyme gene -
Dynamics of Genetic Rescue in Inbred Drosophila Melanogaster Populations
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Springer - Publisher Connector Conserv Genet (2010) 11:449–462 DOI 10.1007/s10592-010-0058-z RESEARCH ARTICLE Dynamics of genetic rescue in inbred Drosophila melanogaster populations R. Bijlsma • M. D. D. Westerhof • L. P. Roekx • I. Pen Received: 11 October 2009 / Accepted: 23 December 2009 / Published online: 4 February 2010 Ó The Author(s) 2010. This article is published with open access at Springerlink.com Abstract Genetic rescue has been proposed as a man- deleterious at 25°C but lethal at 29°C. By comparing fitness agement strategy to improve the fitness of genetically eroded at 25°C (the temperature during the rescue experiment) and populations by alleviating inbreeding depression. We stud- 29°C, we show that the lethal allele reached significant ied the dynamics of genetic rescue in inbred populations of frequencies in most rescued populations, which upon Drosophila. Using balancer chromosomes, we show that the renewed inbreeding became fixed in part of the inbred lines. force of heterosis that accompanies genetic rescue is large In conclusion, in addition to the fitness increase genetic and allows even a recessive lethal to increase substantially in rescue can easily result in a substantial increase in the fre- frequency in the rescued populations, particularly at stress quency of mildly deleterious alleles carried by the immi- temperatures. This indicates that deleterious alleles present grants. This can endanger the rescued population greatly in the immigrants can increase significantly in frequency in when it undergoes recurrent inbreeding. -
The Inflated Significance of Neutral Genetic Diversity in Conservation Genetics PERSPECTIVE Jo~Ao C
PERSPECTIVE The inflated significance of neutral genetic diversity in conservation genetics PERSPECTIVE Jo~ao C. Teixeiraa,b,1 and Christian D. Hubera,1 Edited by Andrew G. Clark, Cornell University, Ithaca, NY, and approved December 30, 2020 (received for review July 22, 2020) The current rate of species extinction is rapidly approaching unprecedented highs, and life on Earth presently faces a sixth mass extinction event driven by anthropogenic activity, climate change, and ecological collapse. The field of conservation genetics aims at preserving species by using their levels of genetic diversity, usually measured as neutral genome-wide diversity, as a barometer for evaluating pop- ulation health and extinction risk. A fundamental assumption is that higher levels of genetic diversity lead to an increase in fitness and long-term survival of a species. Here, we argue against the perceived impor- tance of neutral genetic diversity for the conservation of wild populations and species. We demonstrate that no simple general relationship exists between neutral genetic diversity and the risk of species extinc- tion. Instead, a better understanding of the properties of functional genetic diversity, demographic his- tory, and ecological relationships is necessary for developing and implementing effective conservation genetic strategies. conservation genetics | adaptive potential | inbreeding depression | genetic load | species extinction Are Species with Little Genetic Diversity Moreover, low genetic diversity is related to reduced Endangered? individual life span and health, along with a depleted Climate change caused by human activity is currently capacity for population growth (9). In contrast, high responsible for widespread ecological disruption and levels of genetic diversity are often seen as key to habitat destruction, with an ensuing unprecedented promoting population survival and guaranteeing the rate of species loss known as the Anthropocene Mass adaptive potential of natural populations in the face of Extinction (1–4). -
Using Reciprocal Transplants to Assess Local Adaptation, Genetic Rescue, and Sexual Selection in Newly Established Populations
G C A T T A C G G C A T genes Article Using Reciprocal Transplants to Assess Local Adaptation, Genetic Rescue, and Sexual Selection in Newly Established Populations Jacques Labonne 1,* , Aurélie Manicki 1, Louise Chevalier 1, Marin Tétillon 1, François Guéraud 1 and Andrew P. Hendry 2,* 1 Université de Pau et des Pays de l’Adour, UMR INRAE-UPPA, Ecobiop, FR-64310 Saint-Pée sur Nivelle, France; [email protected] (A.M.); [email protected] (L.C.); [email protected] (M.T.); [email protected] (F.G.) 2 Redpath Museum and Department of Biology, McGill University, Montreal, QC H3A 0C4, Canada * Correspondence: [email protected] (J.L.); [email protected] (A.P.H.) Abstract: Small populations establishing on colonization fronts have to adapt to novel environments with limited genetic variation. The pace at which they can adapt, and the influence of genetic variation on their success, are key questions for understanding intraspecific diversity. To investigate these topics, we performed a reciprocal transplant experiment between two recently founded populations of brown trout in the sub-Antarctic Kerguelen Islands. Using individual tagging and genetic assignment methods, we tracked the fitness of local and foreign individuals, as well as the fitness of their offspring over two generations. In both populations, although not to the same extent, gene flow occurred between local and foreign gene pools. In both cases, however, we failed to detect obvious footprints of local adaptation (which should limit gene flow) and only weak support for genetic rescue (which should enhance gene flow).