Habitat Fragmentation and Wildlife Corridors
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A Metapopulation Model with Discrete Size Structure
A METAPOPULATION MODEL WITH DISCRETE SIZE STRUCTURE MAIA MARTCHEVA¤ AND HORST R. THIEME¦ Abstract. We consider a discrete size-structured metapopulation mo- del with the proportions of patches occupied by n individuals as de- pendent variables. Adults are territorial and stay on a certain patch. The juveniles may emigrate to enter a dispersers' pool from which they can settle on another patch and become adults. Absence of coloniza- tion and absence of emigration lead to extinction of the metapopulation. We de¯ne the basic reproduction number R0 of the metapopulation as a measure for its strength of persistence. The metapopulation is uniformly weakly persistent if R0 > 1. We identify subcritical bifurcation of per- sistence equilibria from the extinction equilibrium as a source of multiple persistence equilibria: it occurs, e.g., when the immigration rate (into occupied pathes) exceeds the colonization rate (of empty patches). We determine that the persistence-optimal dispersal strategy which maxi- mizes the basic reproduction number is of bang-bang type: If the number of adults on a patch is below carrying capacity all the juveniles should stay, if it is above the carrying capacity all the juveniles should leave. 1. Introduction A metapopulation is a group of populations of the same species which occupy separate areas (patches) and are connected by dispersal. Each sep- arate population in the metapopulation is referred to as a local population. Metapopulations occur naturally or by human activity as a result of habitat loss and fragmentation. An overview of the empirical evidence for the exis- tence of metapopulation dynamics can be found in [31]. -
Biogeography, Community Structure and Biological Habitat Types of Subtidal Reefs on the South Island West Coast, New Zealand
Biogeography, community structure and biological habitat types of subtidal reefs on the South Island West Coast, New Zealand SCIENCE FOR CONSERVATION 281 Biogeography, community structure and biological habitat types of subtidal reefs on the South Island West Coast, New Zealand Nick T. Shears SCIENCE FOR CONSERVATION 281 Published by Science & Technical Publishing Department of Conservation PO Box 10420, The Terrace Wellington 6143, New Zealand Cover: Shallow mixed turfing algal assemblage near Moeraki River, South Westland (2 m depth). Dominant species include Plocamium spp. (yellow-red), Echinothamnium sp. (dark brown), Lophurella hookeriana (green), and Glossophora kunthii (top right). Photo: N.T. Shears Science for Conservation is a scientific monograph series presenting research funded by New Zealand Department of Conservation (DOC). Manuscripts are internally and externally peer-reviewed; resulting publications are considered part of the formal international scientific literature. Individual copies are printed, and are also available from the departmental website in pdf form. Titles are listed in our catalogue on the website, refer www.doc.govt.nz under Publications, then Science & technical. © Copyright December 2007, New Zealand Department of Conservation ISSN 1173–2946 (hardcopy) ISSN 1177–9241 (web PDF) ISBN 978–0–478–14354–6 (hardcopy) ISBN 978–0–478–14355–3 (web PDF) This report was prepared for publication by Science & Technical Publishing; editing and layout by Lynette Clelland. Publication was approved by the Chief Scientist (Research, Development & Improvement Division), Department of Conservation, Wellington, New Zealand. In the interest of forest conservation, we support paperless electronic publishing. When printing, recycled paper is used wherever possible. CONTENTS Abstract 5 1. Introduction 6 2. -
Effective Population Size and Genetic Conservation Criteria for Bull Trout
North American Journal of Fisheries Management 21:756±764, 2001 q Copyright by the American Fisheries Society 2001 Effective Population Size and Genetic Conservation Criteria for Bull Trout B. E. RIEMAN* U.S. Department of Agriculture Forest Service, Rocky Mountain Research Station, 316 East Myrtle, Boise, Idaho 83702, USA F. W. A LLENDORF Division of Biological Sciences, University of Montana, Missoula, Montana 59812, USA Abstract.ÐEffective population size (Ne) is an important concept in the management of threatened species like bull trout Salvelinus con¯uentus. General guidelines suggest that effective population sizes of 50 or 500 are essential to minimize inbreeding effects or maintain adaptive genetic variation, respectively. Although Ne strongly depends on census population size, it also depends on demographic and life history characteristics that complicate any estimates. This is an especially dif®cult problem for species like bull trout, which have overlapping generations; biologists may monitor annual population number but lack more detailed information on demographic population structure or life history. We used a generalized, age-structured simulation model to relate Ne to adult numbers under a range of life histories and other conditions characteristic of bull trout populations. Effective population size varied strongly with the effects of the demographic and environmental variation included in our simulations. Our most realistic estimates of Ne were between about 0.5 and 1.0 times the mean number of adults spawning annually. We conclude that cautious long-term management goals for bull trout populations should include an average of at least 1,000 adults spawning each year. Where local populations are too small, managers should seek to conserve a collection of interconnected populations that is at least large enough in total to meet this minimum. -
Analysis of Habitat Fragmentation and Ecosystem Connectivity Within the Castle Parks, Alberta, Canada by Breanna Beaver Submit
Analysis of Habitat Fragmentation and Ecosystem Connectivity within The Castle Parks, Alberta, Canada by Breanna Beaver Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Science in the Environmental Science Program YOUNGSTOWN STATE UNIVERSITY December, 2017 Analysis of Habitat Fragmentation and Ecosystem Connectivity within The Castle Parks, Alberta, Canada Breanna Beaver I hereby release this thesis to the public. I understand that this thesis will be made available from the OhioLINK ETD Center and the Maag Library Circulation Desk for public access. I also authorize the University or other individuals to make copies of this thesis as needed for scholarly research. Signature: Breanna Beaver, Student Date Approvals: Dawna Cerney, Thesis Advisor Date Peter Kimosop, Committee Member Date Felicia Armstrong, Committee Member Date Clayton Whitesides, Committee Member Date Dr. Salvatore A. Sanders, Dean of Graduate Studies Date Abstract Habitat fragmentation is an important subject of research needed by park management planners, particularly for conservation management. The Castle Parks, in southwest Alberta, Canada, exhibit extensive habitat fragmentation from recreational and resource use activities. Umbrella and keystone species within The Castle Parks include grizzly bears, wolverines, cougars, and elk which are important animals used for conservation agendas to help protect the matrix of the ecosystem. This study identified and analyzed the nature of habitat fragmentation within The Castle Parks for these species, and has identified geographic areas of habitat fragmentation concern. This was accomplished using remote sensing, ArcGIS, and statistical analyses, to develop models of fragmentation for ecosystem cover type and Digital Elevation Models of slope, which acted as proxies for species habitat suitability. -
Community Ecology
Schueller 509: Lecture 12 Community ecology 1. The birds of Guam – e.g. of community interactions 2. What is a community? 3. What can we measure about whole communities? An ecology mystery story If birds on Guam are declining due to… • hunting, then bird populations will be larger on military land where hunting is strictly prohibited. • habitat loss, then the amount of land cleared should be negatively correlated with bird numbers. • competition with introduced black drongo birds, then….prediction? • ……. come up with a different hypothesis and matching prediction! $3 million/yr Why not profitable hunting instead? (Worked for the passenger pigeon: “It was the demographic nightmare of overkill and impaired reproduction. If you’re killing a species far faster than they can reproduce, the end is a mathematical certainty.” http://www.audubon.org/magazine/may-june- 2014/why-passenger-pigeon-went-extinct) Community-wide effects of loss of birds Schueller 509: Lecture 12 Community ecology 1. The birds of Guam – e.g. of community interactions 2. What is a community? 3. What can we measure about whole communities? What is an ecological community? Community Ecology • Collection of populations of different species that occupy a given area. What is a community? e.g. Microbial community of one human “YOUR SKIN HARBORS whole swarming civilizations. Your lips are a zoo teeming with well- fed creatures. In your mouth lives a microbiome so dense —that if you decided to name one organism every second (You’re Barbara, You’re Bob, You’re Brenda), you’d likely need fifty lifetimes to name them all. -
Life History Evolution in Response to Changes in Metapopulation
bioRxiv preprint doi: https://doi.org/10.1101/021683; this version posted October 9, 2015. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Life history evolution in response to changes in metapopulation 2 structure in an arthropod herbivore 3 4 Authors: De Roissart A1, Wybouw N2,3, Renault D 4, Van Leeuwen T2, 3 & Bonte D1,* 5 6 Affiliations: 7 1 Ghent University, Dep. Biology, Terrestrial Ecology Unit, K.L. Ledeganckstraat 35, B-9000 8 Ghent, Belgium 9 2 Ghent University, Dep. Crop Protection, Laboratory of Agrozoology, Coupure Links 653, B- 10 9000 Ghent, Belgium 11 3 University of Amsterdam, Institute for Biodiversity and Ecosystem Dynamics, Science Park 12 904, 1098 XH Amsterdam, the Netherlands 13 4 Université de Rennes 1, UMR 6553 ECOBIO CNRS, Avenue du Gal Leclerc 263, CS 74205, 14 35042 Rennes Cedex, France 15 16 17 *Corresponding author: Dries Bonte, Ghent University, Dep. Biology, Terrestrial Ecology 18 Unit, K.L. Ledeganckstraat 35, B-9000 Ghent, Belgium. Email: [email protected]; tel: 19 0032 9 264 52 13; fax: 0032 9 264 87 94 20 21 E-mail address of the co-authors:[email protected]; [email protected]; 22 [email protected]; [email protected]; [email protected] 23 24 Manuscript type: Standard paper 25 26 Running title: Metapopulation structure and life history evolution 27 28 Key-words: metapopulation-level selection, stochasticity, Tetranychus urticae 29 30 1 bioRxiv preprint doi: https://doi.org/10.1101/021683; this version posted October 9, 2015. -
6 Metapopulations of Butterflies
Case Studies in Ecology and Evolution DRAFT 6 Metapopulations of Butterflies Butterflies inhabit an unpredictable world. Consider the checkerspot butterfly, Melitaea cinxia, also known as the Glanville Fritillary. They depend on specific host plants for larval development. The population size is buffeted by the vagaries of weather, availability of suitable host plants, and random demographic stochasticity in the small patches. The result is that local populations often go extinct when the host plants fail, or when larvae are unable to complete development before the winter. But butterflies also have wings. Even though the checkerspots are not particularly strong flyers (they move a maximum of a couple of kilometers and most individuals remain in their natal patch), butterflies occasionally move from one patch to another. Empty patches are eventually recolonized. So, over a regional scale the total number of butterflies remains nearly constant, despite the constant turnover of local populations. Professor Ilkka Hanski and his students in Finland have been studying the patterns of extinction and recolonization of habitat patches by the checkerspot butterflies for two decades on the small island of Åland in southwestern Finland. The butterflies on Åland can be described as a “metapopulation”, or “population of populations”, connected by migration. In the original formulation by Richard Levins, he imagined a case where each population was short-lived, and the persistence of the system depended on the re-colonization of empty patches by immigrants from other nearby source populations. Thus colonizations and extinctions operate in a dynamic balance that can maintain a species in the landscape of interconnected patches indefinitely. -
Islands in the Stream 2002: Exploring Underwater Oases
Islands in the Stream 2002: Exploring Underwater Oases NOAA: Office of Ocean Exploration Mission Three: SUMMARY Discovery of New Resources with Pharmaceutical Potential (Pharmaceutical Discovery) Exploration of Vision and Bioluminescence in Deep-sea Benthos (Vision and Bioluminescence) Microscopic view of a Pachastrellidae sponge (front) and an example of benthic bioluminescence (back). August 16 - August 31, 2002 Shirley Pomponi, Co-Chief Scientist Tammy Frank, Co-Chief Scientist John Reed, Co-Chief Scientist Edie Widder, Co-Chief Scientist Pharmaceutical Discovery Vision and Bioluminescence Harbor Branch Oceanographic Institution Harbor Branch Oceanographic Institution ABSTRACT Harbor Branch Oceanographic Institution (HBOI) scientists continued their cutting-edge exploration searching for untapped sources of new drugs, examining the visual physiology of deep-sea benthos and characterizing the habitat in the South Atlantic Bight aboard the R/V Seaward Johnson from August 16-31, 2002. Over a half-dozen new species of sponges were recorded, which may provide scientists with information leading to the development of compounds used to study, treat, or diagnose human diseases. In addition, wondrous examples of bioluminescence and emission spectra were recorded, providing scientists with more data to help them understand how benthic organisms visualize their environment. New and creative Table of Contents ways to outreach and educate the public also Key Findings and Outcomes................................2 Rationale and Objectives ....................................4 -
Inbreeding Effects in Wild Populations
230 Review TRENDS in Ecology & Evolution Vol.17 No.5 May 2002 43 Putz, F.E. (1984) How trees avoid and shed lianas. estimate of total aboveground biomass for an neotropical forest of French Guiana: spatial and Biotropica 16, 19–23 eastern Amazonian forest. J. Trop. Ecol. temporal variability. J. Trop. Ecol. 17, 79–96 44 Appanah, S. and Putz, F.E. (1984) Climber 16, 327–335 52 Pinard, M.A. and Putz, F.E. (1996) Retaining abundance in virgin dipterocarp forest and the 48 Fichtner, K. and Schulze, E.D. (1990) Xylem water forest biomass by reducing logging damage. effect of pre-felling climber cutting on logging flow in tropical vines as measured by a steady Biotropica 28, 278–295 damage. Malay. For. 47, 335–342 state heating method. Oecologia 82, 350–361 53 Chai, F.Y.C. (1997) Above-ground biomass 45 Laurance, W.F. et al. (1997) Biomass collapse in 49 Restom, T.G. and Nepstad, D.C. (2001) estimation of a secondary forest in Sarawak. Amazonian forest fragments. Science Contribution of vines to the evapotranspiration of J. Trop. For. Sci. 9, 359–368 278, 1117–1118 a secondary forest in eastern Amazonia. Plant 54 Putz, F.E. (1983) Liana biomass and leaf area of a 46 Meinzer, F.C. et al. (1999) Partitioning of soil Soil 236, 155–163 ‘terra firme’ forest in the Rio Negro basin, water among canopy trees in a seasonally dry 50 Putz, F.E. and Windsor, D.M. (1987) Liana Venezuela. Biotropica 15, 185–189 tropical forest. Oecologia 121, 293–301 phenology on Barro Colorado Island, Panama. -
Interactions Between Organisms . and Environment
INTERACTIONS BETWEEN ORGANISMS . AND ENVIRONMENT 2·1 FUNCTIONAL RELATIONSHIPS An understanding of the relationships between an organism and its environment can be attained only when the environmental factors that can be experienced by the organism are considered. This is difficult because it is first necessary for the ecologist to have some knowledge of the neurological and physiological detection abilities of the organism. Sound, for example, should be measured with an instrument that responds to sound energy in the same way that the organism being studied does. Snow depths should be measured in a manner that reflects their effect on the animal. If six inches of snow has no more effect on an animal than three inches, a distinction between the two depths is meaningless. Six inches is not twice three inches in terms of its effect on the animal! Lower animals differ from man in their response to environmental stimuli. Color vision, for example, is characteristic of man, monkeys, apes, most birds, some domesticated animals, squirrels, and, undoubtedly, others. Deer and other wild ungulates probably detect only shades of grey. Until definite data are ob tained on the nature of color vision in an animal, any measurement based on color distinctions could be misleading. Infrared energy given off by any object warmer than absolute zero (-273°C) is detected by thermal receptors on some animals. Ticks are sensitive to infrared radiation, and pit vipers detect warm prey with thermal receptors located on the anterior dorsal portion of the skull. Man can detect different levels of infrared radiation with receptors on the skin, but they are not directional nor are they as sensitive as those of ticks and vipers. -
Equilibrium Theory of Island Biogeography: a Review
Equilibrium Theory of Island Biogeography: A Review Angela D. Yu Simon A. Lei Abstract—The topography, climatic pattern, location, and origin of relationship, dispersal mechanisms and their response to islands generate unique patterns of species distribution. The equi- isolation, and species turnover. Additionally, conservation librium theory of island biogeography creates a general framework of oceanic and continental (habitat) islands is examined in in which the study of taxon distribution and broad island trends relation to minimum viable populations and areas, may be conducted. Critical components of the equilibrium theory metapopulation dynamics, and continental reserve design. include the species-area relationship, island-mainland relation- Finally, adverse anthropogenic impacts on island ecosys- ship, dispersal mechanisms, and species turnover. Because of the tems are investigated, including overexploitation of re- theoretical similarities between islands and fragmented mainland sources, habitat destruction, and introduction of exotic spe- landscapes, reserve conservation efforts have attempted to apply cies and diseases (biological invasions). Throughout this the theory of island biogeography to improve continental reserve article, theories of many researchers are re-introduced and designs, and to provide insight into metapopulation dynamics and utilized in an analytical manner. The objective of this article the SLOSS debate. However, due to extensive negative anthropo- is to review previously published data, and to reveal if any genic activities, overexploitation of resources, habitat destruction, classical and emergent theories may be brought into the as well as introduction of exotic species and associated foreign study of island biogeography and its relevance to mainland diseases (biological invasions), island conservation has recently ecosystem patterns. become a pressing issue itself. -
Metapopulations and Metacommunities: Combining Spatial and Temporal Perspectives in Plant Ecology
Journal of Ecology 2012, 100, 88–103 doi: 10.1111/j.1365-2745.2011.01917.x CENTENARY SYMPOSIUM SPECIAL FEATURE Metapopulations and metacommunities: combining spatial and temporal perspectives in plant ecology Helen M. Alexander1*, Bryan L. Foster1, Ford Ballantyne IV2, Cathy D. Collins3, Janis Antonovics4 and Robert D. Holt5 1Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS 66045-7534, USA; 2Department of Ecology and Evolutionary Biology and Kansas Biological Survey, University of Kansas, Lawrence, KS 66045-7534, USA; 3Department of Biology, Colby College, Waterville, ME 04901-8840, USA; 4Department of Biology, University of Virginia, Charlottesville, VA 22904, USA; and 5Department of Biology, University of Florida, 223 Bartram Hall, P.O. Box 118525, Gainesville, FL 32611-8525, USA Summary 1. Metapopulation and metacommunity theories occupy a central role in ecology, but can be diffi- cult to apply to plants. Challenges include whether seed dispersal is sufficient for population connec- tivity, the role of seed banks and problems with studying colonization and extinction in long-lived and clonal plants. Further, populations often do not occupy discrete habitat patches. Despite these difficulties, we present case studies to illustrate explicit integration of spatial and temporal data in plant ecology. 2. First, on the population level, we focused on two early successional species that lack discrete hab- itat patches. Multi-year data sets taken with a grid approach and simple models permit the analysis of landscape dynamics that reflect regional as well as local processes. Using Silene latifolia,we examined colonization. We found evidence for seed dispersal and connectivity among populations across a large landscape.