Paleobiology of Jurassic Mammals. George Gaylord Simpson
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Reptile-Like Physiology in Early Jurassic Stem-Mammals
bioRxiv preprint doi: https://doi.org/10.1101/785360; this version posted October 10, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Title: Reptile-like physiology in Early Jurassic stem-mammals Authors: Elis Newham1*, Pamela G. Gill2,3*, Philippa Brewer3, Michael J. Benton2, Vincent Fernandez4,5, Neil J. Gostling6, David Haberthür7, Jukka Jernvall8, Tuomas Kankanpää9, Aki 5 Kallonen10, Charles Navarro2, Alexandra Pacureanu5, Berit Zeller-Plumhoff11, Kelly Richards12, Kate Robson-Brown13, Philipp Schneider14, Heikki Suhonen10, Paul Tafforeau5, Katherine Williams14, & Ian J. Corfe8*. Affiliations: 10 1School of Physiology, Pharmacology & Neuroscience, University of Bristol, Bristol, UK. 2School of Earth Sciences, University of Bristol, Bristol, UK. 3Earth Science Department, The Natural History Museum, London, UK. 4Core Research Laboratories, The Natural History Museum, London, UK. 5European Synchrotron Radiation Facility, Grenoble, France. 15 6School of Biological Sciences, University of Southampton, Southampton, UK. 7Institute of Anatomy, University of Bern, Bern, Switzerland. 8Institute of Biotechnology, University of Helsinki, Helsinki, Finland. 9Department of Agricultural Sciences, University of Helsinki, Helsinki, Finland. 10Department of Physics, University of Helsinki, Helsinki, Finland. 20 11Helmholtz-Zentrum Geesthacht, Zentrum für Material-und Küstenforschung GmbH Germany. 12Oxford University Museum of Natural History, Oxford, OX1 3PW, UK. 1 bioRxiv preprint doi: https://doi.org/10.1101/785360; this version posted October 10, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 13Department of Anthropology and Archaeology, University of Bristol, Bristol, UK. 14Faculty of Engineering and Physical Sciences, University of Southampton, Southampton, UK. -
Evolution of the Patellar Sesamoid Bone in Mammals
A peer-reviewed version of this preprint was published in PeerJ on 21 March 2017. View the peer-reviewed version (peerj.com/articles/3103), which is the preferred citable publication unless you specifically need to cite this preprint. Samuels ME, Regnault S, Hutchinson JR. 2017. Evolution of the patellar sesamoid bone in mammals. PeerJ 5:e3103 https://doi.org/10.7717/peerj.3103 Evolution of the patellar sesamoid bone in mammals Mark E Samuels 1, 2 , Sophie Regnault 3 , John R Hutchinson Corresp. 3 1 Department of Medicine, University of Montreal, Montreal, Quebec, Canada 2 Centre de Recherche du CHU Ste-Justine, Montreal, Quebec, Canada 3 Structure & Motion Laboratory, Department of Comparative Biomedical Sciences, The Royal Veterinary College, Hatfield, Hertfordshire, United Kingdom Corresponding Author: John R Hutchinson Email address: [email protected] The patella is a sesamoid bone located in the major extensor tendon of the knee joint, in the hindlimb of many tetrapods. Although numerous aspects of knee morphology are ancient and conserved among most tetrapods, the evolutionary occurrence of an ossified patella is highly variable. Among extant (crown clade) groups it is found in most birds, most lizards, the monotreme mammals and almost all placental mammals, but it is absent in most marsupial mammals as well as many reptiles. Here we integrate data from the literature and first-hand studies of fossil and recent skeletal remains to reconstruct the evolution of the mammalian patella. We infer that bony patellae most likely evolved between four to six times in crown group Mammalia: in monotremes, in the extinct multituberculates, in one or more stem-mammal genera outside of therian or eutherian mammals, and up to three times in therian mammals. -
A Dated Phylogeny of Marsupials Using a Molecular Supermatrix and Multiple Fossil Constraints
Journal of Mammalogy, 89(1):175–189, 2008 A DATED PHYLOGENY OF MARSUPIALS USING A MOLECULAR SUPERMATRIX AND MULTIPLE FOSSIL CONSTRAINTS ROBIN M. D. BECK* School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, New South Wales 2052, Australia Downloaded from https://academic.oup.com/jmammal/article/89/1/175/1020874 by guest on 25 September 2021 Phylogenetic relationships within marsupials were investigated based on a 20.1-kilobase molecular supermatrix comprising 7 nuclear and 15 mitochondrial genes analyzed using both maximum likelihood and Bayesian approaches and 3 different partitioning strategies. The study revealed that base composition bias in the 3rd codon positions of mitochondrial genes misled even the partitioned maximum-likelihood analyses, whereas Bayesian analyses were less affected. After correcting for base composition bias, monophyly of the currently recognized marsupial orders, of Australidelphia, and of a clade comprising Dasyuromorphia, Notoryctes,and Peramelemorphia, were supported strongly by both Bayesian posterior probabilities and maximum-likelihood bootstrap values. Monophyly of the Australasian marsupials, of Notoryctes þ Dasyuromorphia, and of Caenolestes þ Australidelphia were less well supported. Within Diprotodontia, Burramyidae þ Phalangeridae received relatively strong support. Divergence dates calculated using a Bayesian relaxed molecular clock and multiple age constraints suggested at least 3 independent dispersals of marsupials from North to South America during the Late Cretaceous or early Paleocene. Within the Australasian clade, the macropodine radiation, the divergence of phascogaline and dasyurine dasyurids, and the divergence of perameline and peroryctine peramelemorphians all coincided with periods of significant environmental change during the Miocene. An analysis of ‘‘unrepresented basal branch lengths’’ suggests that the fossil record is particularly poor for didelphids and most groups within the Australasian radiation. -
Miocene Mammal Reveals a Mesozoic Ghost Lineage on Insular New Zealand, Southwest Pacific
Miocene mammal reveals a Mesozoic ghost lineage on insular New Zealand, southwest Pacific Trevor H. Worthy*†, Alan J. D. Tennyson‡, Michael Archer§, Anne M. Musser¶, Suzanne J. Hand§, Craig Jonesʈ, Barry J. Douglas**, James A. McNamara††, and Robin M. D. Beck§ *School of Earth and Environmental Sciences, Darling Building DP 418, Adelaide University, North Terrace, Adelaide 5005, South Australia, Australia; ‡Museum of New Zealand Te Papa Tongarewa, P.O. Box 467, Wellington 6015, New Zealand; §School of Biological, Earth and Environmental Sciences, University of New South Wales, New South Wales 2052, Australia; ¶Australian Museum, 6-8 College Street, Sydney, New South Wales 2010, Australia; ʈInstitute of Geological and Nuclear Sciences, P.O. Box 30368, Lower Hutt 5040, New Zealand; **Douglas Geological Consultants, 14 Jubilee Street, Dunedin 9011, New Zealand; and ††South Australian Museum, Adelaide, South Australia 5000, Australia Edited by James P. Kennett, University of California, Santa Barbara, CA, and approved October 11, 2006 (sent for review July 8, 2006) New Zealand (NZ) has long been upheld as the archetypical Ma) dinosaur material (13) and isolated moa bones from marine example of a land where the biota evolved without nonvolant sediments up to 2.5 Ma (1, 14), the terrestrial record older than terrestrial mammals. Their absence before human arrival is mys- 1 Ma is extremely limited. Until now, there has been no direct terious, because NZ was still attached to East Antarctica in the Early evidence for the pre-Pleistocene presence in NZ of any of its Cretaceous when a variety of terrestrial mammals occupied the endemic vertebrate lineages, particularly any group of terrestrial adjacent Australian portion of Gondwana. -
Constraints on the Timescale of Animal Evolutionary History
Palaeontologia Electronica palaeo-electronica.org Constraints on the timescale of animal evolutionary history Michael J. Benton, Philip C.J. Donoghue, Robert J. Asher, Matt Friedman, Thomas J. Near, and Jakob Vinther ABSTRACT Dating the tree of life is a core endeavor in evolutionary biology. Rates of evolution are fundamental to nearly every evolutionary model and process. Rates need dates. There is much debate on the most appropriate and reasonable ways in which to date the tree of life, and recent work has highlighted some confusions and complexities that can be avoided. Whether phylogenetic trees are dated after they have been estab- lished, or as part of the process of tree finding, practitioners need to know which cali- brations to use. We emphasize the importance of identifying crown (not stem) fossils, levels of confidence in their attribution to the crown, current chronostratigraphic preci- sion, the primacy of the host geological formation and asymmetric confidence intervals. Here we present calibrations for 88 key nodes across the phylogeny of animals, rang- ing from the root of Metazoa to the last common ancestor of Homo sapiens. Close attention to detail is constantly required: for example, the classic bird-mammal date (base of crown Amniota) has often been given as 310-315 Ma; the 2014 international time scale indicates a minimum age of 318 Ma. Michael J. Benton. School of Earth Sciences, University of Bristol, Bristol, BS8 1RJ, U.K. [email protected] Philip C.J. Donoghue. School of Earth Sciences, University of Bristol, Bristol, BS8 1RJ, U.K. [email protected] Robert J. -
Mammals from the Mesozoic of Mongolia
Mammals from the Mesozoic of Mongolia Introduction and Simpson (1926) dcscrihed these as placental (eutherian) insectivores. 'l'he deltathcroids originally Mongolia produces one of the world's most extraordi- included with the insectivores, more recently have narily preserved assemblages of hlesozoic ma~nmals. t)een assigned to the Metatheria (Kielan-Jaworowska Unlike fossils at most Mesozoic sites, Inany of these and Nesov, 1990). For ahout 40 years these were the remains are skulls, and in some cases these are asso- only Mesozoic ~nanimalsknown from Mongolia. ciated with postcranial skeletons. Ry contrast, 'I'he next discoveries in Mongolia were made by the Mesozoic mammals at well-known sites in North Polish-Mongolian Palaeontological Expeditions America and other continents have produced less (1963-1971) initially led by Naydin Dovchin, then by complete material, usually incomplete jaws with den- Rinchen Barsbold on the Mongolian side, and Zofia titions, or isolated teeth. In addition to the rich Kielan-Jaworowska on the Polish side, Kazi~nierz samples of skulls and skeletons representing Late Koualski led the expedition in 1964. Late Cretaceous Cretaceous mam~nals,certain localities in Mongolia ma~nmalswere collected in three Gohi Desert regions: are also known for less well preserved, but important, Bayan Zag (Djadokhta Formation), Nenlegt and remains of Early Cretaceous mammals. The mammals Khulsan in the Nemegt Valley (Baruungoyot from hoth Early and Late Cretaceous intervals have Formation), and llcrmiin 'ISav, south-\vest of the increased our understanding of diversification and Neniegt Valley, in the Red beds of Hermiin 'rsav, morphologic variation in archaic mammals. which have heen regarded as a stratigraphic ecluivalent Potentially this new information has hearing on the of the Baruungoyot Formation (Gradzinslti r't crl., phylogenetic relationships among major branches of 1977). -
Panciroli, Elsa, Benson, Roger B J and Butler, Richard J (2018) New
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by National Museums Scotland Research Repository Panciroli, Elsa, Benson, Roger B J and Butler, Richard J (2018) New partial dentaries of amphitheriid mammal Palaeoxonodon ooliticus from Scotland, and posterior dentary morphology in early cladotherians. Acta Palaeontologica Polonica, 63. ISSN 1732-2421 10.4202/app.00434.2017 http://repository.nms.ac.uk/2048 Deposited on: 31 May 2018 NMS Repository – Research publications by staff of the National Museums Scotland http://repository.nms.ac.uk/ http://app.pan.pl/SOM/app63-Panciroli_etal_SOM.pdf SUPPLEMENTARY ONLINE MATERIAL FOR New partial dentaries of amphitheriid mammalian Palaeoxonodon ooliticus from Scotland, and posterior dentary morphology in early cladotherians Elsa Panciroli, Roger B.J. Benson, and Richard J. Butler Published in Acta Palaeontologica Polonica 2018, 63(X): xxx-xxx. https://doi.org/10.4202/app.00434.2017 Supplementary Online Material SOM 1. 3D model of Palaeoxonodon ooliticus NMS G.1992.47.123 from the Isle of Skye, Scotland, available at http://app.pan.pl/SOM/app63-Panciroli_etal_SOM/SOM_1.stl SOM 2. 3D model of Palaeoxonodon ooliticus NMS G.1992.47.123 from the Isle of Skye, Scotland, dentition only, available at http://app.pan.pl/SOM/app63-Panciroli_etal_SOM/SOM_2.stl SOM 3. 3D model of Palaeoxonodon ooliticus NMS G.2017.37.1 from the Isle of Skye, Scotland, available at http://app.pan.pl/SOM/app63-Panciroli_etal_SOM/SOM_3.stl SOM 4. 3D model of Palaeoxonodon ooliticus NMS G.2017.37.1 from the Isle of Skye, Scotland, dentition only, available at http://app.pan.pl/SOM/app63-Panciroli_etal_SOM/SOM_4.stl SOM 5. -
SI Appendix the Oldest Modern Therian Mammal from Europe And
SI Appendix The oldest modern therian mammal from Europe and its bearing on stem marsupial paleobiogeography RomainVulloa,b,1, Emmanuel Gheerbrantc, Christian de Muizonc, Didier Néraudeaub Table of contents • Part I. List of characters studied. • Part II. Character matrix. • Part III. TNT analysis, cladograms, and characters at nodes. • Part IV. References. Part I List of characters studied (mostly molars) All characters are additive, except when mentioned. 1. Molar cusp shape: sharp, gracile (0), low but still acute (1), or inflated, robust, low, bulbous (2). Arcantiodelphys (1). 2. Protocone: lacking (undifferentiated from the lingual cingulum) (0), incipient (very small) but inflated with protocristae and functionnal (1), or well developed, with large protofossa (2). Arcantiodelphys (2). Kielantherium : upper molars features are based on the new material reported by Lopatin and Averianov (1). 3. Stylar shelf: wide (0), very wide (1), or narrow (2). Arcantiodelphys (0). Character non additive. 4. Protocone development: mesio-distally narrow and compressed (0) or well-developed (both mesio-distally and labio-lingually) and uncompressed (1). Arcantiodelphys (1). 5. Height of the protocone relative to the paracone and metacone (whichever is highest of the latter two): protocone markedly lower (less than 70%) (0), protocone of intermediate height (70%~80%) (1), or protocone near the height of paracone and metacone (within 80%) (2). Arcantiodelphys (2). 6. Stylar cusp C: absent (0), present but weak (1), or present and well developed (2). Arcantiodelphys (1). 7. Stylar cusp D: absent (0), present but weak (1), or present and well developed (2). Arcantiodelphys (1). 8. Paraconule and metaconule: absent or weak (0) or present and well developed (1). -
Early Cretaceous Amphilestid ('Triconodont') Mammals from Mongolia
Early Cretaceous amphilestid ('triconodont') mammals from Mongolia ZOFIAKIELAN-JAWOROWSKA and DEMBERLYIN DASHZEVEG Kielan-Jaworowską Z. &Daslueveg, D. 1998. Early Cretaceous amphilestid (.tricono- dont') mammals from Mongotia. - Acta Pal.aeontol.ogicaPolonica,43,3, 413438. Asmall collection of ?Aptianor ?Albian amphilestid('triconodont') mammals consisting of incomplete dentaries and maxillae with teeth, from the Khoboor localiĘ Guchin Us counĘ in Mongolia, is described. Grchinodon Troftmov' 1978 is regarded a junior subjective synonym of GobiconodonTroftmov, 1978. Heavier wear of the molariforms M3 andM4than of themore anteriorone-M2 in Gobiconodonborissiaki gives indirect evidence formolariformreplacement in this taxon. The interlocking mechanismbetween lower molariforms n Gobiconodon is of the pattern seen in Kuchneotherium and Ttnodon. The ińterlocking mechanism and the type of occlusion ally Amphilestidae with Kuehneotheriidae, from which they differ in having lower molariforms with main cusps aligned and the dentary-squamosal jaw joint (double jaw joint in Kuehneotheńdae). The main cusps in upper molariforms M3-M5 of Gobiconodon, however, show incipient tńangular arrangement. The paper gives some support to Mills' idea on the therian affinities of the Amphilestidae, although it cannot be excluded that the characters that unite the two groups developed in parallel. Because of scanty material and arnbiguĘ we assign the Amphilestidae to order incertae sedis. Key words : Mammali4 .triconodonts', Amphilestidae, Kuehneotheriidae, Early Cretaceous, Mongolia. Zofia Kiel,an-Jaworowska [zkielnn@twarda,pan.pl], InsĘtut Paleobiologii PAN, ul. Twarda 5 I /5 5, PL-00-8 I 8 Warszawa, Poland. DemberĘin Dash7eveg, Geological Institute, Mongolian Academy of Sciences, Ulan Bator, Mongolia. Introduction Beliajeva et al. (1974) reportedthe discovery of Early Cretaceous mammals at the Khoboor locality (referred to also sometimes as Khovboor), in the Guchin Us Soinon (County), Gobi Desert, Mongolia. -
Mesozoic: the Dark Age for Mammals!
Ed’s Simplified History of the Mammals Note progression from Pelycosaurs (1) to Therapsids and Cynodonts (2) in Triassic. Stem mammals appeared in Late Triassic and Early Jurassic (3). Relationships among the Middle Jurassic forms (4) are controversial (see handout). Therian clade, identified by the tribosphenic molar (5), emerged at the end of the Jurassic, Early Cretaceous. A slightly more detailed version… in case you like something that looks more slick From Pough et al. 2009. Vertebrate Life, 8th ed. Pelycosaurs Dominated the late Permian, gave rise to therapsids Therapsids Rapid radiation in late Permian, around 270 MYA Still “mammal-like reptiles” The mass extinction at the end of the Permian was the greatest loss of diversity ever with >80% of all known genera and about 90% of all species going extinct, both terrestrial and marine. Cynodonts Late Permian to mid Triassic Last remaining group of therapsids, survived mass extinction at the end of the Permian. Persisted well Only 1 lineage of into Triassic and developed cynodonts survived many features associated through the late Triassic, with mammals. and this group became ancestors of mammals. Mesozoic: the Dark Age for Mammals! multituberculate Morganucodon, one of the earliest mammals (What else was happening in the Late Triassic and Jurassic Hadrocodium that may have contributed to mammals becoming small and Most were very small with nocturnal?) conservative morphology ...but new fossil finds indicate more diversity than we thought Repenomanus Still, largest known mammal during Mesozic Most were shrew to is no larger than a mouse sized, for 125 woodchuck million years! Some Mesozoic events and mammals you should know 1. -
The Platypus Is Not a Rodent: DNA Hybridization, Amniote Phylogeny and the Palimpsest Theory
The platypus is not a rodent: DNA hybridization, amniote phylogeny and the palimpsest theory John A. W. Kirsch1* and Gregory C. Mayer1,2 1The University of Wisconsin Zoological Museum, 250 North Mills Street, Madison,WI 53706, USA 2Department of Biological Sciences, University of Wisconsin-Parkside, Kenosha,WI 53141, USA We present DNA-hybridization data on 21 amniotes and two anurans showing that discrimination is obtained among most of these at the class and lower levels. Trees generated from these data largely agree with conventional views, for example in not associating birds and mammals. However, the sister relation- ships found here of the monotremes to marsupials, and of turtles to the alligator, are surprising results which are nonetheless consistent with the results of some other studies. The Marsupionta hypothesis of Gregory is reviewed, as are opinions about the placement of chelonians. Anatomical and reproductive data considered by Gregory do not unequivocally preclude a marsupial^monotreme special relationship, and there is other recent evidence for placing turtles within the Diapsida. We conclude that the evidential meaning of the molecular data is as shown in the trees, but that the topologies may be in£uenced by a base- compositional bias producing a seemingly slow evolutionary rate in monotremes, or by algorithmic artefacts (in the case of turtles as well). Keywords: Chelonia; Crocodilia; Eutheria; Marsupialia; Marsupionta; molecular evolution `Unyielding factualists have so set the style in taxonomy relationships continue to be debated, `everyone knows' and morphology that, if their assertions were accepted, that the latter result cannot be correct. hardly any known type of animal could possibly have The orthodox view of the phylogeny of mammals been derived even from any known past group.' regards monotremes (the living `Prototheria') as the Gregory (1947, p. -
Mammalian Fauna of the Late Jurassic Guimarota Ecosystem
Asociación Paleontológica Argentina. Publicación Especial 7 ISSN 0328-347X VII International Symposium on Mesozoic Terrestrial Ecosystems: 123-126. Buenos Aires, 30-6-2001 MaMMalian fauna of the Late Jurassic Guimarota ecoSyStem Thomas MARTIN1 Abstract. The Late Jurassic (Kirnmeridgian) Guimarota loca lit y near Leiria in west-central Portugal has yielded more than 800 mammalian dentaries and partial skulls representing the largest sample of Late Jurassic mammals in the world. However, despite the enormous number of specimens collected, the mam- malian fauna appears somewhat depauperate. So far, only Multituberculata (several genera of Paulchoffatiidae; 28% of total number), Docodonta (Halda nadan exspectaius Kühne and Krusat; 24%), and Holotheria (48%) represented by Paurodontidae (Henkelatherium guimaratae Krebs and Drescheratherium acutum Krebs) and Dryolestidae (Dryalestes leiriensis Martín, Krebsoiherium Iusiianicum Martin, and Guimaroiodus inflatus Martin) have been detected. "Triconodonta" and Syrnmetrodonta, which are well represented at other Late Jurassic localities (e.g., Morrison Forrnation), are missing. To recover the rare mammalian taxa of the Guimarota ecosystem, a project was initiated to study the nearly 7000 isolated mammalian teeth that had been obtained by screenwashing. With a single exception, the same taxa are represented. Among the thousands of isolated teeth, however, 25 lower and 23 upper premolars and mo- lars of a tiny primitive Zatheria have been found, of which the lower molars closely resemble the "Porto Pinheiro molar". After sorting the isolated teeth, the mammalian fauna of the Guimarota ecosystem prob- ably is completely recorded. Apparently, the coastal swamp in the Lusitanian graben where the lignite formed represented a stressed environment not appropriate for some marnmalian groups.