And Diagnostic Implications During Chronic Inflammation
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Sorting Nexins in Protein Homeostasis Sara E. Hanley1,And Katrina F
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 6 November 2020 doi:10.20944/preprints202011.0241.v1 Sorting nexins in protein homeostasis Sara E. Hanley1,and Katrina F. Cooper2* 1Department of Molecular Biology, Graduate School of Biomedical Sciences, Rowan University, Stratford, NJ, 08084, USA 1 [email protected] 2 [email protected] * [email protected] Tel: +1 (856)-566-2887 1Department of Molecular Biology, Graduate School of Biomedical Sciences, Rowan University, Stratford, NJ, 08084, USA Abstract: Sorting nexins (SNXs) are a highly conserved membrane-associated protein family that plays a role in regulating protein homeostasis. This family of proteins is unified by their characteristic phox (PX) phosphoinositides binding domain. Along with binding to membranes, this family of SNXs also comprises a diverse array of protein-protein interaction motifs that are required for cellular sorting and protein trafficking. SNXs play a role in maintaining the integrity of the proteome which is essential for regulating multiple fundamental processes such as cell cycle progression, transcription, metabolism, and stress response. To tightly regulate these processes proteins must be expressed and degraded in the correct location and at the correct time. The cell employs several proteolysis mechanisms to ensure that proteins are selectively degraded at the appropriate spatiotemporal conditions. SNXs play a role in ubiquitin-mediated protein homeostasis at multiple levels including cargo localization, recycling, degradation, and function. In this review, we will discuss the role of SNXs in three different protein homeostasis systems: endocytosis lysosomal, the ubiquitin-proteasomal, and the autophagy-lysosomal system. The highly conserved nature of this protein family by beginning with the early research on SNXs and protein trafficking in yeast and lead into their important roles in mammalian systems. -
Sorting Nexin 27 Regulates the Lysosomal Degradation of Aquaporin-2 Protein in the Kidney Collecting Duct
cells Article Sorting Nexin 27 Regulates the Lysosomal Degradation of Aquaporin-2 Protein in the Kidney Collecting Duct Hyo-Jung Choi 1,2, Hyo-Ju Jang 1,3, Euijung Park 1,3, Stine Julie Tingskov 4, Rikke Nørregaard 4, Hyun Jun Jung 5 and Tae-Hwan Kwon 1,3,* 1 Department of Biochemistry and Cell Biology, School of Medicine, Kyungpook National University, Taegu 41944, Korea; [email protected] (H.-J.C.); [email protected] (H.-J.J.); [email protected] (E.P.) 2 New Drug Development Center, Daegu-Gyeongbuk Medical Innovation Foundation, Taegu 41061, Korea 3 BK21 Plus KNU Biomedical Convergence Program, Department of Biomedical Science, School of Medicine, Kyungpook National University, Taegu 41944, Korea 4 Department of Clinical Medicine, Aarhus University, Aarhus 8200, Denmark; [email protected] (S.J.T.); [email protected] (R.N.) 5 Division of Nephrology, Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; [email protected] * Correspondence: [email protected]; Tel.: +82-53-420-4825; Fax: +82-53-422-1466 Received: 30 March 2020; Accepted: 11 May 2020; Published: 13 May 2020 Abstract: Sorting nexin 27 (SNX27), a PDZ (Postsynaptic density-95/Discs large/Zonula occludens 1) domain-containing protein, cooperates with a retromer complex, which regulates intracellular trafficking and the abundance of membrane proteins. Since the carboxyl terminus of aquaporin-2 (AQP2c) has a class I PDZ-interacting motif (X-T/S-X-F), the role of SNX27 in the regulation of AQP2 was studied. Co-immunoprecipitation assay of the rat kidney demonstrated an interaction of SNX27 with AQP2. -
Sorting Nexin-27 Regulates AMPA Receptor Trafficking Through The
RESEARCH ARTICLE Sorting nexin-27 regulates AMPA receptor trafficking through the synaptic adhesion protein LRFN2 Kirsty J McMillan1†*, Paul J Banks2†, Francesca LN Hellel1, Ruth E Carmichael1, Thomas Clairfeuille3, Ashley J Evans1, Kate J Heesom4, Philip Lewis4, Brett M Collins3, Zafar I Bashir2, Jeremy M Henley1, Kevin A Wilkinson1*, Peter J Cullen1* 1School of Biochemistry, University of Bristol, Bristol, United Kingdom; 2School of Physiology, Pharmacology and Neuroscience, University of Bristol, Bristol, United Kingdom; 3Institute for Molecular Bioscience, The University of Queensland, Queensland, Australia; 4Proteomics facility, School of Biochemistry, University of Bristol, Bristol, United Kingdom Abstract The endosome-associated cargo adaptor sorting nexin-27 (SNX27) is linked to various neuropathologies through sorting of integral proteins to the synaptic surface, most notably AMPA receptors. To provide a broader view of SNX27-associated pathologies, we performed proteomics in rat primary neurons to identify SNX27-dependent cargoes, and identified proteins linked to excitotoxicity, epilepsy, intellectual disabilities, and working memory deficits. Focusing on the *For correspondence: synaptic adhesion molecule LRFN2, we established that SNX27 binds to LRFN2 and regulates its [email protected] endosomal sorting. Furthermore, LRFN2 associates with AMPA receptors and knockdown of (KJMM); LRFN2 results in decreased surface AMPA receptor expression, reduced synaptic activity, and [email protected] attenuated hippocampal long-term potentiation. Overall, our study provides an additional (KAW); mechanism by which SNX27 can control AMPA receptor-mediated synaptic transmission and [email protected] (PJC) plasticity indirectly through the sorting of LRFN2 and offers molecular insight into the perturbed †These authors contributed function of SNX27 and LRFN2 in a range of neurological conditions. -
A Targeted Rnai Screen Identifies Endocytic Trafficking Factors That
Diabetes Volume 67, March 2018 385 A Targeted RNAi Screen Identifies Endocytic Trafficking Factors That Control GLP-1 Receptor Signaling in Pancreatic b-Cells Teresa Buenaventura,1 Nisha Kanda,1 Phoebe C. Douzenis,1 Ben Jones,2 Stephen R. Bloom,2 Pauline Chabosseau,1 Ivan R. Corrêa Jr.,3 Domenico Bosco,4 Lorenzo Piemonti,5,6 Piero Marchetti,7 Paul R. Johnson,8 A.M. James Shapiro,9 Guy A. Rutter,1 and Alejandra Tomas1 Diabetes 2018;67:385–399 | https://doi.org/10.2337/db17-0639 The glucagon-like peptide 1 (GLP-1) receptor (GLP-1R) is a key binding, GLP-1Rs signal through stimulatory G (Gs) pro- target for type 2 diabetes (T2D) treatment. Because endocytic teins to raise intracellular cAMP levels and modulate insulin trafficking of agonist-bound receptors is one of the most secretion from pancreatic b-cells. important routes for regulation of receptor signaling, a better As with other G protein–coupled receptors (GPCRs), SIGNAL TRANSDUCTION understanding of this process may facilitate the develop- GLP-1R signaling is tightly regulated through endocytic ment of new T2D therapeutic strategies. Here, we screened trafficking (2). Activated GLP-1Rs are rapidly internalized – 29 proteins with known functions in G protein coupled recep- and recycled to the plasma membrane or distributed through- fi tor traf cking for their role in GLP-1R potentiation of insulin out endocytic compartments (3). Despite the pivotal role b fi secretion in pancreatic -cells. We identify ve (clathrin, of trafficking in GPCR signaling, neither the molecular dynamin1, AP2, sorting nexins [SNX] SNX27, and SNX1) details nor the key factors responsible for GLP-1R endo- that increase and four (huntingtin-interacting protein 1 cytosis and postendocytic sorting have been thoroughly [HIP1], HIP14, GASP-1, and Nedd4) that decrease insulin investigated. -
Crystal Structure of the PX Domain of SNX27
ISSN 0006-2979, Biochemistry (Moscow), 2019, Vol. 84, No. 2, pp. 147-152. © Pleiades Publishing, Ltd., 2019. Published in Russian in Biokhimiya, 2019, Vol. 84, No. 2, pp. 223-228. Originally published in Biochemistry (Moscow) On-Line Papers in Press, as Manuscript BM18-189, November 19, 2018. Crystal Structure of the PX Domain of SNX27 Y. Li1,a, S. Liao1,b, F. Li1,c, and Z. Zhu1,d* 1Hefei National Laboratory for Physical Sciences at the Microscale and School of Life Sciences, University of Science and Technology of China, 230027 Hefei, China ae-mail: [email protected] be-mail: [email protected] ce-mail: [email protected] de-mail: [email protected] Received July 5, 2018 Revised September 29, 2018 Accepted September 29, 2018 Abstract—SNX27 is a component of the retromer complex essential for the recycling of transmembrane receptors. SNX27 contains the N-terminal Phox (PX) domain that binds inositol 1,3-diphosphate (Ins(1,3)P2) and is important for the SNX27 localization. Here, we determined the crystal structure of human SNX27 PX domain by X-ray crystallography. We found that the sulfate ion is located in the positively charged lipid-binding pocket of the PX domain, which mimics the phospholipid recognition. In addition, we modelled the SNX27-PX–Ins(1,3)P2 complex to better understand the mechanism of Ins(1,3)P2 recognition by the PX domain of SNX27. DOI: 10.1134/S0006297919020056 Keywords: SNX27, lipid binding, PX domain, crystal structure Endocytosis is an energy consuming process that phate (Ins(1,3)P2) [8, 9]. -
G Protein-Regulated Endocytic Trafficking of Adenylyl Cyclase Type 9
RESEARCH ARTICLE G protein-regulated endocytic trafficking of adenylyl cyclase type 9 Andre´ M Lazar1, Roshanak Irannejad2, Tanya A Baldwin3, Aparna B Sundaram4, J Silvio Gutkind5, Asuka Inoue6, Carmen W Dessauer3, Mark Von Zastrow2,7* 1Program in Biochemistry and Cell Biology, University of California San Francisco, San Francisco, United States; 2Cardiovascular Research Institute and Department of Biochemistry and Biophysics, University of California San Francisco, San Francisco, United States; 3Department of Integrative Biology and Pharmacology, University of Texas Health Science Center, Houston, United States; 4Lung Biology Center, Department of Medicine, University of California San Francisco, San Francisco, United States; 5Department of Pharmacology and Moores Cancer Center, University of California San Diego, San Diego, United States; 6Graduate School of Pharmaceutical Sciences, Tohoku University, Aoba-ku, Sendai, Japan; 7Department of Psychiatry and Department of Cellular and Molecular Pharmacology, University of California San Francisco, San Francisco, United States Abstract GPCRs are increasingly recognized to initiate signaling via heterotrimeric G proteins as they move through the endocytic network, but little is known about how relevant G protein effectors are localized. Here we report selective trafficking of adenylyl cyclase type 9 (AC9) from the plasma membrane to endosomes while adenylyl cyclase type 1 (AC1) remains in the plasma membrane, and stimulation of AC9 trafficking by ligand-induced activation of Gs-coupled GPCRs. AC9 transits a similar, dynamin-dependent early endocytic pathway as ligand-activated GPCRs. However, unlike GPCR traffic control which requires b-arrestin but not Gs, AC9 traffic control requires Gs but not b-arrestin. We also show that AC9, but not AC1, mediates cAMP production stimulated by endogenous receptor activation in endosomes. -
Phox Homology Band 4.1/Ezrin/Radixin/Moesin-Like Proteins Function As Molecular Scaffolds That Interact with Cargo Receptors and Ras Gtpases
Phox homology band 4.1/ezrin/radixin/moesin-like proteins function as molecular scaffolds that interact with cargo receptors and Ras GTPases Rajesh Ghai, Mehdi Mobli, Suzanne J. Norwood, Andrea Bugarcic, Rohan D. Teasdale, Glenn F. King, and Brett M. Collins1 Institute for Molecular Bioscience, The University of Queensland, St. Lucia, Queensland 4072, Australia Edited by Frances M. Brodsky, University of California, San Francisco, CA, and accepted by the Editorial Board March 15, 2011 (received for review November 29, 2010) Following endocytosis, the fates of receptors, channels, and other the disease. The homology of SNX31 to SNX17 (approximately transmembrane proteins are decided via specific endosomal sort- 40% identity) suggests an involvement in similar endosomal ing pathways, including recycling to the cell surface for continued transport pathways. activity. Two distinct phox-homology (PX)-domain-containing pro- SNX27 is unique among the PX proteins, containing an teins, sorting nexin (SNX) 17 and SNX27, are critical regulators of N-terminal PDZ domain upstream of the PX domain. SNX27 recycling from endosomes to the cell surface. In this study we de- has also been annotated to possess a Ras-association domain monstrate that SNX17, SNX27, and SNX31 all possess a novel 4.1/ and extended C-terminal region (1, 2, 13). SNX27 was first iden- ezrin/radixin/moesin (FERM)-like domain. SNX17 has been shown tified as a binding partner for the 5-hydroxytryptamine type-4 to bind to Asn-Pro-Xaa-Tyr (NPxY) sequences in the cytoplasmic receptor (5-HT4R) (13), and overexpression of SNX27 directs tails of cargo such as LDL receptors and the amyloid precursor pro- localization of 5-HT4R and Kir3 potassium channels to early tein, and we find that both SNX17 and SNX27 display similar affi- endosomal autoantigen 1 (EEA1)-positive early endosomes nities for NPxY sorting motifs, suggesting conserved functions in (13, 14). -
The Emerging Role of Sorting Nexins in Cardiovascular Diseases
Clinical Science (2019) 133 723–737 https://doi.org/10.1042/CS20190034 Review Article The emerging role of sorting nexins in cardiovascular diseases Jian Yang1,2, Van Anthony M. Villar3, Selim Rozyyev3, Pedro A. Jose3 and Chunyu Zeng2 1Department of Clinical Nutrition, The Third Affiliated Hospital of Chongqing Medical University, Chongqing 410020, P.R. China ; 2Department of Cardiology, Daping Hospital, The Third Military Medical University, Chongqing 400042, P.R. China; 3Division of Renal Diseases and Hypertension, Department of Medicine, and Department of Pharmacology/Physiology, The George Washington University School of Medicine and Health Sciences, Washington, DC 20052, U.S.A. Correspondence: Jian Yang ([email protected]) or Chunyu Zeng ([email protected]) The sorting nexin (SNX) family consists of a diverse group of cytoplasmic- and membrane-associated phosphoinositide-binding proteins that play pivotal roles in the regu- lation of protein trafficking. This includes the entire endocytic pathway, such as endocytosis, endosomal sorting, and endosomal signaling. Dysfunctions of SNX pathway are involved in several forms of cardiovascular disease (CVD). Moreover, SNX gene variants are associated with CVDs. In this review, we discuss the current knowledge on SNX-mediated regulatory mechanisms and their roles in the pathogenesis and treatment of CVDs. Introduction Cardiovascular diseases (CVDs), including hypertension, coronary heart disease, heart failure, and stroke, are the leading causes of morbidity and mortality, worldwide, accounting for substantial suffering and healthcare-related expenditures [1]. According to the American Heart Association, the duration of infor- mal caregiving hours increases from 0.10 h/wk for patients with coronary heart disease to 6.12 h/wk for patients with stroke. -
Sorting Nexin 27 Regulates AΒ Production Through Modulating
Article SortingNexin27RegulatesAb Production through Modulating g-Secretase Activity Graphical Abstract Authors Xin Wang, Timothy Huang, ..., Wanjin Hong, Huaxi Xu Correspondence [email protected] In Brief Down syndrome (DS) patients invariably develop Alzheimer’s disease (AD) pathol- ogy in their 40s. It has been reported that SNX27 deficiency contributes to impaired learning and memory in DS. In this study, Wang et al. show that SNX27 regulates APP cleavage and Ab generation. In addi- tion, they suggest that SNX27 acts as a g- secretase interaction partner and show that the interaction dissociates the g-sec- retase complex, thus decreasing its pro- teolytic activity. The results provide a new clue to the pathogenesis of DS and AD. Highlights SNX27 regulates g-secretase cleavage of APP and consequent Ab generation SNX27 binds to presenilin 1 and regulates g-secretase complex formation and activity Transduction of SNX27 reduces Ab in an AD mouse model Snx27 deletion promotes Ab generation and neuronal loss in an AD mouse model Wang et al., 2014, Cell Reports 9, 1023–1033 November 6, 2014 ª2014 The Authors http://dx.doi.org/10.1016/j.celrep.2014.09.037 Cell Reports Article Sorting Nexin 27 Regulates Ab Production through Modulating g-Secretase Activity Xin Wang,1,2 Timothy Huang,2 Yingjun Zhao,2 Qiuyang Zheng,1,2 Robert C. Thompson,2 Guojun Bu,1 Yun-wu Zhang,1,2 Wanjin Hong,3,4 and Huaxi Xu1,2,* 1Fujian Provincial Key Laboratory of Neurodegenerative Disease and Aging Research, Institute of Neuroscience, Medical College, Xiamen University, -
SNX3-Retromer Requires an Evolutionary Conserved MON2:DOPEY2:ATP9A Complex to Mediate Wntless Sorting and Wnt Secretion
ARTICLE DOI: 10.1038/s41467-018-06114-3 OPEN SNX3-retromer requires an evolutionary conserved MON2:DOPEY2:ATP9A complex to mediate Wntless sorting and Wnt secretion Ian J. McGough 1,5, Reinoud E.A. de Groot2, Adam P. Jellett1, Marco C. Betist2, Katherine C. Varandas3,6, Chris M. Danson1, Kate J. Heesom4, Hendrik C. Korswagen2 & Peter J. Cullen 1 1234567890():,; Wntless transports Wnt morphogens to the cell surface and is required for Wnt secretion and morphogenic gradients formation. Recycling of endocytosed Wntless requires the sorting nexin-3 (SNX3)-retromer-dependent endosome-to-Golgi transport pathway. Here we demonstrate the essential role of SNX3-retromer assembly for Wntless transport and report that SNX3 associates with an evolutionary conserved endosome-associated membrane re- modelling complex composed of MON2, DOPEY2 and the putative aminophospholipid translocase, ATP9A. In vivo suppression of Ce-mon-2, Ce-pad-1 or Ce-tat-5 (respective MON2, DOPEY2 and ATP9A orthologues) phenocopy a loss of SNX3-retromer function, leading to enhanced lysosomal degradation of Wntless and a Wnt phenotype. Perturbed Wnt signalling is also observed upon overexpression of an ATPase-inhibited TAT-5(E246Q) mutant, suggesting a role for phospholipid flippase activity during SNX3-retromer-mediated Wntless sorting. Together, these findings provide in vitro and in vivo mechanistic details to describe SNX3-retromer-mediated transport during Wnt secretion and the formation of Wnt- morphogenic gradients. 1 School of Biochemistry, University of Bristol, Bristol BS8 1TD, UK. 2 Hubrecht Institute, Royal Netherlands Academy of Arts and Sciences and University Medical Center Utrecht, Uppsalalaan 8, Utrecht 3584 CT, The Netherlands. -
The Enigmatic Endosome – Sorting the Ins and Outs of Endocytic Trafficking Naava Naslavsky1 and Steve Caplan1,2,*
© 2018. Published by The Company of Biologists Ltd | Journal of Cell Science (2018) 131, jcs216499. doi:10.1242/jcs.216499 REVIEW The enigmatic endosome – sorting the ins and outs of endocytic trafficking Naava Naslavsky1 and Steve Caplan1,2,* ABSTRACT nature remain unanswered. Even very basic questions regarding The early endosome (EE), also known as the sorting endosome (SE) the characterization of endosomes have yet to be satisfactorily is a crucial station for the sorting of cargoes, such as receptors and resolved (see Box 1). For example, are EEs a heterogeneous lipids, through the endocytic pathways. The term endosome relates to population of endosomes, each marked by an overlapping but the receptacle-like nature of this organelle, to which endocytosed different array of proteins? If so, do these different EEs carry out cargoes are funneled upon internalization from the plasma distinct functions, or are they a progressive series of endosomal ‘ ’ membrane. Having been delivered by the fusion of internalized structures along a pathway whereby the EE eventually evolves vesicles with the EE or SE, cargo molecules are then sorted to a into a more mature organelle? variety of endocytic pathways, including the endo-lysosomal pathway Additional key questions remain about the fundamental ways that for degradation, direct or rapid recycling to the plasma membrane, endosomes function. For example, a wealth of evidence supports the and to a slower recycling pathway that involves a specialized form of notion that EEs function by sorting cargo to distinct endosomal endosome known as a recycling endosome (RE), often localized to membrane domains that subsequently undergo budding and fission the perinuclear endocytic recycling compartment (ERC). -
Interplay Between SNX27 and DAG Metabolism in the Control of Trafficking and Signaling at the IS
International Journal of Molecular Sciences Review Interplay Between SNX27 and DAG Metabolism in the Control of Trafficking and Signaling at the IS Natalia González-Mancha and Isabel Mérida * Department of Immunology and Oncology, Centro Nacional de Biotecnología (CNB-CSIC), Darwin 3, Campus UAM Cantoblanco, 28049 Madrid, Spain; [email protected] * Correspondence: [email protected] Received: 18 May 2020; Accepted: 10 June 2020; Published: 15 June 2020 Abstract: Recognition of antigens displayed on the surface of an antigen-presenting cell (APC) by T-cell receptors (TCR) of a T lymphocyte leads to the formation of a specialized contact between both cells named the immune synapse (IS). This highly organized structure ensures cell–cell communication and sustained T-cell activation. An essential lipid regulating T-cell activation is diacylglycerol (DAG), which accumulates at the cell–cell interface and mediates recruitment and activation of proteins involved in signaling and polarization. Formation of the IS requires rearrangement of the cytoskeleton, translocation of the microtubule-organizing center (MTOC) and vesicular compartments, and reorganization of signaling and adhesion molecules within the cell–cell junction. Among the multiple players involved in this polarized intracellular trafficking, we find sorting nexin 27 (SNX27). This protein translocates to the T cell–APC interface upon TCR activation, and it is suggested to facilitate the transport of cargoes toward this structure. Furthermore, its interaction with diacylglycerol kinase ζ (DGKζ), a negative regulator of DAG, sustains the precise modulation of this lipid and, thus, facilitates IS organization and signaling. Here, we review the role of SNX27, DAG metabolism, and their interplay in the control of T-cell activation and establishment of the IS.