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The Use of Barcoding Sequences for the Construction of Phylogenetic Relationships in the Euphorbiaceae
University of Padova Department of Land, Environment Agriculture and Forestry MSc in Mediterranean Forestry and Natural Resources Management The use of barcoding sequences for the construction of phylogenetic relationships in the Euphorbiaceae Supervisor: Alessandro Vannozzi Co-supervisor: Prof. Dr. Oliver Gailing Submitted by: Bikash Kharel Matriculation No. 1177536 ACADEMIC YEAR 2017/2018 Acknowledgments This dissertation has come to this positive end through the collective efforts of several people and organizations: from rural peasants to highly academic personnel and institutions around the world. Without their mental, physical and financial support this research would not have been possible. I would like to express my gratitude to all of them who were involved directly or indirectly in this endeavor. To all of them, I express my deep appreciation. Firstly, I am thankful to Prof. Dr. Oliver Gailing for providing me the opportunity to conduct my thesis on this topic. I greatly appreciate my supervisor Alessandro Vannozzi for providing the vision regarding Forest Genetics and DNA barcoding. My cordial thanks and heartfelt gratitude goes to him whose encouragements, suggestions and comments made this research possible to shape in this form. I am also thankful to Prof. Dr. Konstantin V. Krutovsky for his guidance in each and every step of this research especially helping me with the CodonCode software and reviewing the thesis. I also want to thank Erasmus Mundus Programme for providing me with a scholarship for pursuing Master’s degree in Mediterranean Forestry and Natural Resources Management (MEDFOR) course. Besides this, I would like to thank all my professors who broadened my knowledge during the period of my study in University of Lisbon and University of Padova. -
Check List 8(4): 722–730, 2012 © 2012 Check List and Authors Chec List ISSN 1809-127X (Available at Journal of Species Lists and Distribution
Check List 8(4): 722–730, 2012 © 2012 Check List and Authors Chec List ISSN 1809-127X (available at www.checklist.org.br) Journal of species lists and distribution Check list of ground-dwelling ants (Hymenoptera: PECIES S Formicidae) of the eastern Acre, Amazon, Brazil OF Patrícia Nakayama Miranda 1,2*, Marco Antônio Oliveira 3, Fabricio Beggiato Baccaro 4, Elder Ferreira ISTS 1 5,6 L Morato and Jacques Hubert Charles Delabie 1 Universidade Federal do Acre, Centro de Ciências Biológicas e da Natureza. BR 364 – Km 4 – Distrito Industrial. CEP 69915-900. Rio Branco, AC, Brazil. 2 Instituo Federal do Acre, Campus Rio Branco. Avenida Brasil 920, Bairro Xavier Maia. CEP 69903-062. Rio Branco, AC, Brazil. 3 Universidade Federal de Viçosa, Campus Florestal. Rodovia LMG 818, Km 6. CEP 35690-000. Florestal, MG, Brazil. 4 Instituto Nacional de Pesquisas da Amazônia, Programa de Pós-graduação em Ecologia. CP 478. CEP 69083-670. Manaus, AM, Brazil. 5 Comissão Executiva do Plano da Lavoura Cacaueira, Centro de Pesquisas do Cacau, Laboratório de Mirmecologia – CEPEC/CEPLAC. Caixa Postal 07. CEP 45600-970. Itabuna, BA, Brazil. 6 Universidade Estadual de Santa Cruz. CEP 45650-000. Ilhéus, BA, Brazil. * Corresponding author. E-mail: [email protected] Abstract: The ant fauna of state of Acre, Brazilian Amazon, is poorly known. The aim of this study was to compile the species sampled in different areas in the State of Acre. An inventory was carried out in pristine forest in the municipality of Xapuri. This list was complemented with the information of a previous inventory carried out in a forest fragment in the municipality of Senador Guiomard and with a list of species deposited at the Entomological Collection of National Institute of Amazonian Research– INPA. -
Revision of the Genus Cleidion (Euphorbiaceae) in Malesia
BLUMEA 50: 197–219 Published on 22 April 2005 http://dx.doi.org/10.3767/000651905X623373 REVISION OF THE GENUS CLEIDION (EUPHORBIACEAE) IN MALESIA KRISTO K.M. KULJU & PETER C. VAN WELZEN Nationaal Herbarium Nederland, Universiteit Leiden branch, P.O. Box 9514, 2300 RA Leiden, The Netherlands; e-mail: [email protected], [email protected] SUMMARY A revision of the Malesian species in the genus Cleidion is presented. Cleidion javanicum is shown to be the correct name for the widespread type species (instead of the name C. spiciflorum). A new species, C. luziae, resembling C. javanicum, is described from the Moluccas, New Guinea and the Solomon Islands. In addition, C. salomonis is synonymised with C. papuanum and C. lanceolatum is treated as a variety of C. ramosii. In total 7 Malesian Cleidion species are recognized. Cleidion megistophyllum from the Philippines cannot reliably be confirmed to belong to the genus due to lack of information and specimens and is treated as a doubtful species. Key words: Cleidion, Acalypheae, Cleidiinae, revision, taxonomy, Malesia. INTRODUCTION Cleidion is a pantropical genus belonging to the large angiosperm family Euphorbiaceae s.s. It was described by Blume (1825), who included a single species C. javanicum1. The first revision was made by Müller Argoviensis (1865, 1866). His work was fol- lowed by the comprehensive treatment of Pax & Hoffmann (1914), which included 17 species. Pax & Hoffmann excluded the section Discocleidion Müll.Arg. which differs from Cleidion by the presence of a staminate and pistillate disc (in Cleidion a disc is absent), stipellate and palmatinerved leaves (in Cleidion the leaves are non-stipellate and pinnatinerved), and differences in anther type. -
Diversity and Organization of the Ground Foraging Ant Faunas of Forest, Grassland and Tree Crops in Papua New Guinea
- - -- Aust. J. Zool., 1975, 23, 71-89 Diversity and Organization of the Ground Foraging Ant Faunas of Forest, Grassland and Tree Crops in Papua New Guinea P. M. Room Department of Agriculture, Stock and Fisheries, Papua New Guinea; present address: Cotton Research Unit, CSIRO, P.M.B. Myallvale Mail Run, Narrabri, N.S.W. 2390. Abstract Thirty samples of ants were taken in each of seven habitats: primary forest, rubber plantation, coffee plantation, oilpalm plantation, kunai grassland, eucalypt savannah and urban grassland. Sixty samples were taken in cocoa plantations. A total of 156 species was taken, and the frequency of occurrence of each in each habitat is given. Eight stenoecious species are suggested as habitat indicators. Habitats fell into a series according to the similarity of their ant faunas: forest, rubber and coffee, cocoa and oilpalm, kunai and savannah, urban. This series represents an artificial, discontinuous succession from a complex stable ecosystem to a simple unstable one. Availability of species suitably preadapted to occupy habitats did not appear to limit species richness. Habitat heterogeneity and stability as affected by human interference did seem to account for inter-habitat variability in species richness. Species diversity was compared between habitats using four indices: Fisher et al.; Margalef; Shannon; Brillouin. Correlation of diversity index with habitat hetero- geneity plus stability was good for the first two, moderate for Shannon, and poor for Brillouin. Greatest diversity was found in rubber, the penultimate in the series of habitats according to hetero- geneity plus stability ('maturity'). Equitability exceeded the presumed maximum in rubber, and was close to the maximum in all habitats. -
Nueva Técnica De Captura Para Evaluar La Estratificación Vertical De Hormigas (Hymenoptera: Formicidae) En El Bosque Seco Tropical, Colombia
Boletín de la Sociedad Entomológica Aragonesa (S.E.A.), nº 46 (2010) : 311−318. NUEVA TÉCNICA DE CAPTURA PARA EVALUAR LA ESTRATIFICACIÓN VERTICAL DE HORMIGAS (HYMENOPTERA: FORMICIDAE) EN EL BOSQUE SECO TROPICAL, COLOMBIA Richar Manuel Simanca Fontalvo1 & Neis José Martínez Hernández2 1 Semillero Investigación Insectos (NEOPTERA) del Caribe colombiano. Programa de Biología, Facultad de Ciencias Básicas, Universidad del Atlántico. Ciudadela Universitaria, Km 7- Vía Puerto Colombia. Barranquilla, Colombia − [email protected] 2 Grupo Biodiversidad del Caribe colombiano. Docente Programa de Biología, Facultad de Ciencias Básicas, Universidad del Atlántico. Ciudadela Universitaria, Km 7- Vía Puerto Colombia. Barranquilla, Colombia − [email protected] Resumen: Se evaluó una nueva técnica de captura para determinar la estratificación vertical de la mirmecofauna en un frag- mento de bosque seco tropical en la reserva Luriza (Atlántico, Colombia). Se realizaron siete muestreos desde abril hasta julio de 2009. En un transecto lineal, se marcaron 10 puntos distanciados 50 m cada uno, en los que se instalaron tres trampas Cornel (TC) modificadas, cebadas con calamar y mezcla de esencia de vainilla con panela en tres estratos vegetativos (suelo, arbustivo y dosel). Se recolectaron 38 morfoespecies, pertenecientes a 21 géneros, 23% de los géneros reportados para Co- lombia. La mayor riqueza (30) se presentó en el suelo y la menor (20) en dosel. Por otro lado, el dosel y suelo presentaron la mayor (0,936) tasa de complementariedad; demostrándose la mayor tasa de recambio entre estos estratos. El ANOSIM (R= 0,375; p= 0,01) demostró que existe un patrón de estratificación de la mirmecofauna en la reserva. Las hormigas que domina- ron en dosel se caracterizan por pertenecer al gremio de arbóreas de reclutamiento masivo y en suelo las omnívoras y genera- listas. -
Concentrates Against Stored Product Pests G Ready-To-Use Insecticides
BÁBOLNA BIO Phone: +361 43-20-461, Fax: +361 43-20-401, e-mail: [email protected] CONTENTSCONTENTS INTRODUCTION RODENTICIDES G READY-TO-USE BAITS, PELLETS, WAX BLOCKS BAITING STATIONS FOR RODENT CONTROL INSECTICIDES G CONCENTRATES FOR CRAWLING INSECT CONTROL G IGR BASED CONCENTRATES ❍ FOR COCKROACH AND STORED PRODUCT PEST CONTROL ❍ FOR FLEA, STORED PRODUCT PEST AND MOSQUITO CONTROL ❍ FOR ECTOPARASITE CONTROL G CONCENTRATES AGAINST STORED PRODUCT PESTS G READY-TO-USE INSECTICIDES PESTICIDE SMOKE PRODUCTS TRAPS PHEROMONE TRAPS FOR AGRICULTURAL USE PHEROMONES FOR MONITORING FOR AGRICULTURAL USE BIRD CONTROL DEVICES SPRAYERS EQUIPMENT FOR MOSQUITO CONTROL PRODUCTS UNDER DEVELOPMENT BÁBOLNA BIO Phone: +361 43-20-461, Fax: +361 43-20-401, e-mail: [email protected] INTRODUCTIONINTRODUCTION The activities of Bábolna Bioenvironmental Centre look back to a past of more than 30 years. During this period of time the company has gained a leading role in the field of large scale pest control as well as in the production and sales of public health and household pest control products. The most outstanding success in the life of the company was the total deratization project of the city of Budapest and the maintenance of the rat-free state for 30 years now. The successful cockroach control carried out in 145,000 flats in housing estates can be considered as another outstanding result. To develop and manufacture up-to-date and efficient pest control products, BÁBOLNA BIO has established its own research and development laboratories, insecticide and rodenticide production and packaging plant. Besides the traditional formulations, the company gives high priority to the production of insecticide-free and pheromone insect traps. -
Redalyc.A Checklist of the Ants (Hymenoptera: Formicidae) of The
Agronomía Colombiana ISSN: 0120-9965 [email protected] Universidad Nacional de Colombia Colombia Vergara-Navarro, Erika Valentina; Serna, Francisco A checklist of the ants (Hymenoptera: Formicidae) of the department of Antioquia, Colombia and new records for the country Agronomía Colombiana, vol. 31, núm. 3, 2013, pp. 324-342 Universidad Nacional de Colombia Bogotá, Colombia Available in: http://www.redalyc.org/articulo.oa?id=180329804008 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative CROP PROTECTION A checklist of the ants (Hymenoptera: Formicidae) of the department of Antioquia, Colombia and new records for the country Lista de las hormigas (Hymenoptera: Formicidae) del departamento de Antioquia, Colombia, y nuevos registros para el país Erika Valentina Vergara-Navarro1, 2 and Francisco Serna2, 3 ABSTRACT RESUMEN Antioquia is a state (department) of Colombia, located in the Antioquia es un departamento de Colombia localizado en los northwestern Andes of South America. Geologically, the north- Andes más noroccidentales de Suramérica. Geológicamente, la western region of the Western Range in Antioquia and Chocó región noroccidental de la Cordillera Occidental en Antioquia includes the fault resulting from the connection between the y Chocó contiene la falla resultante de la unión entre el Istmo Isthmus of Panamá and South America. The Occidental and de Panamá y Sudamérica. Las cordilleras Occidental y Central Central cordilleras in Colombia are characterized by a num- de Colombia se caracterizan por presentar una cantidad impor- ber of reliefs, valleys and water basins, containing historical tante de relieves, valles y cuencas hidrográficas compuestas por biological refuges and endemisms. -
THE TRUE ARMY ANTS of the INDO-AUSTRALIAN AREA (Hymenoptera: Formicidae: Dorylinae)
Pacific Insects 6 (3) : 427483 November 10, 1964 THE TRUE ARMY ANTS OF THE INDO-AUSTRALIAN AREA (Hymenoptera: Formicidae: Dorylinae) By Edward O. Wilson BIOLOGICAL LABORATORIES, HARVARD UNIVERSITY, CAMBRIDGE, MASS., U. S. A. Abstract: All of the known Indo-Australian species of Dorylinae, 4 in Dorylus and 34 in Aenictus, are included in this revision. Eight of the Aenictus species are described as new: artipus, chapmani, doryloides, exilis, huonicus, nganduensis, philiporum and schneirlai. Phylo genetic and numerical analyses resulted in the discarding of two extant subgenera of Aenictus (Typhlatta and Paraenictus) and the loose clustering of the species into 5 informal " groups" within the unified genus Aenictus. A consistency test for phylogenetic characters is discussed. The African and Indo-Australian doryline species are compared, and available information in the biology of the Indo-Australian species is summarized. The " true " army ants are defined here as equivalent to the subfamily Dorylinae. Not included are species of Ponerinae which have developed legionary behavior independently (see Wilson, E. O., 1958, Evolution 12: 24-31) or the subfamily Leptanillinae, which is very distinct and may be independent in origin. The Dorylinae are not as well developed in the Indo-Australian area as in Africa and the New World tropics. Dorylus itself, which includes the famous driver ants, is centered in Africa and sends only four species into tropical Asia. Of these, the most widespread reaches only to Java and the Celebes. Aenictus, on the other hand, is at least as strongly developed in tropical Asia and New Guinea as it is in Africa, with 34 species being known from the former regions and only about 15 from Africa. -
Title Evolutionary Relationships Between Pollination and Protective Mutualisms in the Genus Macaranga (Euphorbiaceae)( Dissertat
Evolutionary relationships between pollination and protective Title mutualisms in the genus Macaranga (Euphorbiaceae)( Dissertation_全文 ) Author(s) Yamasaki, Eri Citation 京都大学 Issue Date 2014-03-24 URL https://doi.org/10.14989/doctor.k18113 学位規則第9条第2項により要約公開; 許諾条件により本文 Right は2019-06-25に公開 Type Thesis or Dissertation Textversion ETD Kyoto University Evolutionary relationships between pollination and protective mutualisms in the genus Macaranga (Euphorbiaceae) Eri Yamasaki 2014 1 2 Contents 摘要.…………………………………………………………………………………..5 Summary.……………………………………………………………………………..9 Chapter 1 General introduction……………………………………………………………….14 Chapter 2 Diversity of pollination systems in Macaranga Section 2.1 Diversity of bracteole morphology in Macaranga ………………………….20 Section 2.2 Wind and insect pollination (ambophily) in Mallotus , a sister group of Macaranga …………..…………..……...…………..………………………...31 Section 2.3 Disk-shaped nectaries on bracteoles of Macaranga sinensis provide a reward for pollinators……………………………….………………………………...45 Chapter 3 Interactions among plants, pollinators and guard ants in ant-plant Macaranga Section 3.1 Density of ant guards on inflorescences and their effects on herbivores and pollinators…………………………………………………….......................56 Section 3.2 Anal secretions of pollinator thrips of Macaranga winkleri repel guard ants…….71 Chapter 4 General discussion.………………….……………………………………………...85 Appendix…………………………………………………………………….………89 Acknowledgement…………………………………………………………….…...101 Literature cited……………………………….…………………………………….103 -
Carnivory Is Positively Correlated with Latitude Among Omnivorous Mammals: Evidence from Brown Bears, Badgers and Pine Martens
Ann. Zool. Fennici 46: 395–415 ISSN 0003-455X (print), ISSN 1797-2450 (online) Helsinki 18 December 2009 © Finnish Zoological and Botanical Publishing Board 2009 Carnivory is positively correlated with latitude among omnivorous mammals: evidence from brown bears, badgers and pine martens Egle Vulla1, Keith A. Hobson2, Marju Korsten1, Malle Leht3, Ants-Johannes Martin4, Ave Lind4, Peep Männil5, Harri Valdmann1 & Urmas Saarma1* 1) Department of Zoology, Institute of Ecology and Earth Sciences, University of Tartu, Vanemuise 46, 51014 Tartu, Estonia (*corresponding authors’ e-mail: [email protected]) 2) Environment Canada, 11 Innovation Blvd., Saskatoon, Saskatchewan, Canada S7N 3H5 3) Department of Botany, Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi 5, 51014 Tartu, Estonia 4) Department of Plant Protection, Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi 5, 51014 Tartu, Estonia 5) Centre of Forest Protection and Silviculture, Rõõmu tee 2, 51013 Tartu, Estonia Received 17 Nov. 2008, revised version received 4 May 2009, accepted 16 Mar. 2009 Vulla, E., Hobson, K. A., Korsten, M., Leht, M., Martin, A.-J., Lind, A., Männil, P., Valdmann, H. & Saarma, U. 2009: Carnivory is positively correlated with latitude among omnivorous mammals: evidence from brown bears, badgers and pine martens. — Ann. Zool. Fennici 46: 395–415. Omnivores exploit numerous sources of protein and other nutrients throughout the year, and meat is generally considered a high-quality resource. However, it is unknown if there is any general association between latitude and carnivorous behavior in omnivorous mammals. We examined the relative importance of meat and other dietary components, including anthropogenic food items, in the diet of brown bears (Ursus arctos) in Estonia using conventional scat- and stomach-content analyses as well as stable-isotope (δ15N, δ13C) analyses. -
Hymenoptera: Formicidae) Along an Elevational Gradient at Eungella in the Clarke Range, Central Queensland Coast, Australia
RAINFOREST ANTS (HYMENOPTERA: FORMICIDAE) ALONG AN ELEVATIONAL GRADIENT AT EUNGELLA IN THE CLARKE RANGE, CENTRAL QUEENSLAND COAST, AUSTRALIA BURWELL, C. J.1,2 & NAKAMURA, A.1,3 Here we provide a faunistic overview of the rainforest ant fauna of the Eungella region, located in the southern part of the Clarke Range in the Central Queensland Coast, Australia, based on systematic surveys spanning an elevational gradient from 200 to 1200 m asl. Ants were collected from a total of 34 sites located within bands of elevation of approximately 200, 400, 600, 800, 1000 and 1200 m asl. Surveys were conducted in March 2013 (20 sites), November 2013 and March–April 2014 (24 sites each), and ants were sampled using five methods: pitfall traps, leaf litter extracts, Malaise traps, spray- ing tree trunks with pyrethroid insecticide, and timed bouts of hand collecting during the day. In total we recorded 142 ant species (described species and morphospecies) from our systematic sampling and observed an additional species, the green tree ant Oecophylla smaragdina, at the lowest eleva- tions but not on our survey sites. With the caveat of less sampling intensity at the lowest and highest elevations, species richness peaked at 600 m asl (89 species), declined monotonically with increasing and decreasing elevation, and was lowest at 1200 m asl (33 spp.). Ant species composition progres- sively changed with increasing elevation, but there appeared to be two gradients of change, one from 200–600 m asl and another from 800 to 1200 m asl. Differences between the lowland and upland faunas may be driven in part by a greater representation of tropical and arboreal-nesting sp ecies in the lowlands and a greater representation of subtropical species in the highlands. -
Hymenoptera: Formicidae)
ASIAN MYRMECOLOGY Volume 8, 17 – 48, 2016 ISSN 1985-1944 © Weeyawat Jaitrong, Benoit Guénard, Evan P. Economo, DOI: 10.20362/am.008019 Nopparat Buddhakala and Seiki Yamane A checklist of known ant species of Laos (Hymenoptera: Formicidae) Weeyawat Jaitrong1, Benoit Guénard2, Evan P. Economo3, Nopparat Buddhakala4 and Seiki Yamane5* 1 Thailand Natural History Museum, National Science Museum, Technopolis, Khlong 5, Khlong Luang, Pathum Thani, 12120 Thailand E-mail: [email protected] 2 School of Biological Sciences, The University of Hong Kong, Pok Fu Lam Road, Hong Kong SAR, China 3 Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna, Okinawa 904-0495, Japan 4 Biology Divisions, Faculty of Science and Technology, Rajamangala Univer- sity of Technology Tanyaburi, Pathum Thani 12120 Thailand E-mail: [email protected] 5 Kagoshima University Museum, Korimoto 1-21-30, Kagoshima-shi, 890-0065 Japan *Corresponding author’s email: [email protected] ABSTRACT. Laos is one of the most undersampled areas for ant biodiversity. We begin to address this knowledge gap by presenting the first checklist of Laotian ants. The list is based on a literature review and on specimens col- lected from several localities in Laos. In total, 123 species with three additional subspecies in 47 genera belonging to nine subfamilies are listed, including 62 species recorded for the first time in the country. Comparisons with neighboring countries suggest that this list is still very incomplete. The provincial distribu- tion of ants within Laos also show that most species recorded are from Vien- tiane Province, the central part of Laos while the majority of other provinces have received very little, if any, ant sampling.