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Museum, University of Bergen, Norway for Accepting The
PERSOONIA Published by the Rijksherbarium, Leiden Volume Part 6, 4, pp. 439-443 (1972) The Suboperculate ascus—a review Finn-Egil Eckblad Botanical Museum, University of Bergen, Norway The suboperculate nature of the asci of the Sarcoscyphaceae is discussed, that it does in its and further and it is concluded not exist original sense, that the Sarcoscyphaceae is not closely related to the Sclerotiniaceae. The question of the precise nature ofthe ascus in the Sarcoscyphaceae is important in connection with the of the the The treatment taxonomy of Discomycetes. family has been established the Sarcoscyphaceae as a highranking taxon, Suboperculati, by Le Gal (1946b, 1999), on the basis of its asci being suboperculate. Furthermore, the Suboperculati has beenregarded as intermediatebetween the rest of the Operculati, The Pezizales, and the Inoperculati, especially the order Helotiales, and its family Sclerotiniaceae (Le Gal, 1993). Recent views on the taxonomie position of the Sarcoscyphaceae are given by Rifai ( 1968 ), Eckblad ( ig68 ), Arpin (ig68 ), Kim- brough (1970) and Korf (igyi). The Suboperculati were regarded by Le Gal (1946a, b) as intermediates because had both the beneath they operculum of the Operculati, and in addition, it, some- ofthe of the In the the thing pore structure Inoperculati. Suboperculati pore struc- to ture is said take the form of an apical chamberwith an internal, often incomplete within Note this ring-like structure it. that in case the spores on discharge have to travers a double hindrance, the internal ring and the circular opening, and that the diameters of these obstacles are both smaller than the smallest diameterof the spores. -
Chorioactidaceae: a New Family in the Pezizales (Ascomycota) with Four Genera
mycological research 112 (2008) 513–527 journal homepage: www.elsevier.com/locate/mycres Chorioactidaceae: a new family in the Pezizales (Ascomycota) with four genera Donald H. PFISTER*, Caroline SLATER, Karen HANSENy Harvard University Herbaria – Farlow Herbarium of Cryptogamic Botany, Department of Organismic and Evolutionary Biology, Harvard University, 22 Divinity Avenue, Cambridge, MA 02138, USA article info abstract Article history: Molecular phylogenetic and comparative morphological studies provide evidence for the Received 15 June 2007 recognition of a new family, Chorioactidaceae, in the Pezizales. Four genera are placed in Received in revised form the family: Chorioactis, Desmazierella, Neournula, and Wolfina. Based on parsimony, like- 1 November 2007 lihood, and Bayesian analyses of LSU, SSU, and RPB2 sequence data, Chorioactidaceae repre- Accepted 29 November 2007 sents a sister clade to the Sarcosomataceae, to which some of these taxa were previously Corresponding Editor: referred. Morphologically these genera are similar in pigmentation, excipular construction, H. Thorsten Lumbsch and asci, which mostly have terminal opercula and rounded, sometimes forked, bases without croziers. Ascospores have cyanophilic walls or cyanophilic surface ornamentation Keywords: in the form of ridges or warts. So far as is known the ascospores and the cells of the LSU paraphyses of all species are multinucleate. The six species recognized in these four genera RPB2 all have limited geographical distributions in the northern hemisphere. Sarcoscyphaceae ª 2007 The British Mycological Society. Published by Elsevier Ltd. All rights reserved. Sarcosomataceae SSU Introduction indicated a relationship of these taxa to the Sarcosomataceae and discussed the group as the Chorioactis clade. Only six spe- The Pezizales, operculate cup-fungi, have been put on rela- cies are assigned to these genera, most of which are infre- tively stable phylogenetic footing as summarized by Hansen quently collected. -
Appendix K. Survey and Manage Species Persistence Evaluation
Appendix K. Survey and Manage Species Persistence Evaluation Establishment of the 95-foot wide construction corridor and TEWAs would likely remove individuals of H. caeruleus and modify microclimate conditions around individuals that are not removed. The removal of forests and host trees and disturbance to soil could negatively affect H. caeruleus in adjacent areas by removing its habitat, disturbing the roots of host trees, and affecting its mycorrhizal association with the trees, potentially affecting site persistence. Restored portions of the corridor and TEWAs would be dominated by early seral vegetation for approximately 30 years, which would result in long-term changes to habitat conditions. A 30-foot wide portion of the corridor would be maintained in low-growing vegetation for pipeline maintenance and would not provide habitat for the species during the life of the project. Hygrophorus caeruleus is not likely to persist at one of the sites in the project area because of the extent of impacts and the proximity of the recorded observation to the corridor. Hygrophorus caeruleus is likely to persist at the remaining three sites in the project area (MP 168.8 and MP 172.4 (north), and MP 172.5-172.7) because the majority of observations within the sites are more than 90 feet from the corridor, where direct effects are not anticipated and indirect effects are unlikely. The site at MP 168.8 is in a forested area on an east-facing slope, and a paved road occurs through the southeast part of the site. Four out of five observations are more than 90 feet southwest of the corridor and are not likely to be directly or indirectly affected by the PCGP Project based on the distance from the corridor, extent of forests surrounding the observations, and proximity to an existing open corridor (the road), indicating the species is likely resilient to edge- related effects at the site. -
Agaricales, Basidiomycota) Occurring in Punjab, India
Current Research in Environmental & Applied Mycology 5 (3): 213–247(2015) ISSN 2229-2225 www.creamjournal.org Article CREAM Copyright © 2015 Online Edition Doi 10.5943/cream/5/3/6 Ecology, Distribution Perspective, Economic Utility and Conservation of Coprophilous Agarics (Agaricales, Basidiomycota) Occurring in Punjab, India Amandeep K1*, Atri NS2 and Munruchi K2 1Desh Bhagat College of Education, Bardwal–Dhuri–148024, Punjab, India. 2Department of Botany, Punjabi University, Patiala–147002, Punjab, India. Amandeep K, Atri NS, Munruchi K 2015 – Ecology, Distribution Perspective, Economic Utility and Conservation of Coprophilous Agarics (Agaricales, Basidiomycota) Occurring in Punjab, India. Current Research in Environmental & Applied Mycology 5(3), 213–247, Doi 10.5943/cream/5/3/6 Abstract This paper includes the results of eco-taxonomic studies of coprophilous mushrooms in Punjab, India. The information is based on the survey to dung localities of the state during the various years from 2007-2011. A total number of 172 collections have been observed, growing as saprobes on dung of various domesticated and wild herbivorous animals in pastures, open areas, zoological parks, and on dung heaps along roadsides or along village ponds, etc. High coprophilous mushrooms’ diversity has been established and a number of rare and sensitive species recorded with the present study. The observed collections belong to 95 species spread over 20 genera and 07 families of the order Agaricales. The present paper discusses the distribution of these mushrooms in Punjab among different seasons, regions, habitats, and growing habits along with their economic utility, habitat management and conservation. This is the first attempt in which various dung localities of the state has been explored systematically to ascertain the diversity, seasonal availability, distribution and ecology of coprophilous mushrooms. -
Diversity of Polyporales in the Malay Peninsular and the Application of Ganoderma Australe (Fr.) Pat
DIVERSITY OF POLYPORALES IN THE MALAY PENINSULAR AND THE APPLICATION OF GANODERMA AUSTRALE (FR.) PAT. IN BIOPULPING OF EMPTY FRUIT BUNCHES OF ELAEIS GUINEENSIS MOHAMAD HASNUL BIN BOLHASSAN FACULTY OF SCIENCE UNIVERSITY OF MALAYA KUALA LUMPUR 2013 DIVERSITY OF POLYPORALES IN THE MALAY PENINSULAR AND THE APPLICATION OF GANODERMA AUSTRALE (FR.) PAT. IN BIOPULPING OF EMPTY FRUIT BUNCHES OF ELAEIS GUINEENSIS MOHAMAD HASNUL BIN BOLHASSAN THESIS SUBMITTED IN FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY INSTITUTE OF BIOLOGICAL SCIENCES FACULTY OF SCIENCE UNIVERSITY OF MALAYA KUALA LUMPUR 2013 UNIVERSITI MALAYA ORIGINAL LITERARY WORK DECLARATION Name of Candidate: MOHAMAD HASNUL BIN BOLHASSAN (I.C No: 830416-13-5439) Registration/Matric No: SHC080030 Name of Degree: DOCTOR OF PHILOSOPHY Title of Project Paper/Research Report/Disertation/Thesis (“this Work”): DIVERSITY OF POLYPORALES IN THE MALAY PENINSULAR AND THE APPLICATION OF GANODERMA AUSTRALE (FR.) PAT. IN BIOPULPING OF EMPTY FRUIT BUNCHES OF ELAEIS GUINEENSIS. Field of Study: MUSHROOM DIVERSITY AND BIOTECHNOLOGY I do solemnly and sincerely declare that: 1) I am the sole author/writer of this work; 2) This Work is original; 3) Any use of any work in which copyright exists was done by way of fair dealing and for permitted purposes and any excerpt or extract from, or reference to or reproduction of any copyright work has been disclosed expressly and sufficiently and the title of the Work and its authorship have been acknowledge in this Work; 4) I do not have any actual -
Protistology Mitochondrial Genomes of Amoebozoa
Protistology 13 (4), 179–191 (2019) Protistology Mitochondrial genomes of Amoebozoa Natalya Bondarenko1, Alexey Smirnov1, Elena Nassonova1,2, Anna Glotova1,2 and Anna Maria Fiore-Donno3 1 Department of Invertebrate Zoology, Faculty of Biology, Saint Petersburg State University, 199034 Saint Petersburg, Russia 2 Laboratory of Cytology of Unicellular Organisms, Institute of Cytology RAS, 194064 Saint Petersburg, Russia 3 University of Cologne, Institute of Zoology, Terrestrial Ecology, 50674 Cologne, Germany | Submitted November 28, 2019 | Accepted December 10, 2019 | Summary In this mini-review, we summarize the current knowledge on mitochondrial genomes of Amoebozoa. Amoebozoa is a major, early-diverging lineage of eukaryotes, containing at least 2,400 species. At present, 32 mitochondrial genomes belonging to 18 amoebozoan species are publicly available. A dearth of information is particularly obvious for two major amoebozoan clades, Variosea and Tubulinea, with just one mitochondrial genome sequenced for each. The main focus of this review is to summarize features such as mitochondrial gene content, mitochondrial genome size variation, and presence or absence of RNA editing, showing if they are unique or shared among amoebozoan lineages. In addition, we underline the potential of mitochondrial genomes for multigene phylogenetic reconstruction in Amoebozoa, where the relationships among lineages are not fully resolved yet. With the increasing application of next-generation sequencing techniques and reliable protocols, we advocate mitochondrial -
IDENTIFICAÇÃO DE ESPÉCIES DE Calonectria E REAÇÃO DE ACESSOS DE GRÃO-DE-BICO a ISOLADOS DE Calonectria Brassicae
UNIVERSIDADE DE BRASÍLIA INSTITUTO DE CIÊNCIAS BIOLÓGICAS DEPARTAMENTO DE FITOPATOLOLOGIA PROGRAMA DE PÓS-GRADUAÇÃO EM FITOPATOLOGIA IDENTIFICAÇÃO DE ESPÉCIES DE Calonectria E REAÇÃO DE ACESSOS DE GRÃO-DE-BICO A ISOLADOS DE Calonectria brassicae NARA LÚCIA SOUZA RIBEIRO TRINDADE Brasília – DF 2019 NARA LÚCIA SOUZA RIBEIRO TRINDADE IDENTIFICAÇÃO DE ESPÉCIES DE Calonectria E REAÇÃO DE ACESSOS DE GRÃO-DE-BICO A ISOLADOS DE Calonectria brassicae Dissertação apresentada à Universidade de Brasília como requisito parcial para obtenção do título de Mestre em Fitopatologia pelo Programa de Pós- Graduação em Fitopatologia. Orientador Luiz Eduardo Bassay Blum, Doutor em Fitopatologia BRASÍLIA DISTRITO FEDERAL – BRASIL 2019 FICHA CATALOGRÁFICA Trindade, Nara Lúcia Souza Ribeiro. Identificação de espécies de Calonectria e reação de acessos de grão-de-bico a isolados de Calonectria brassicae / Nara Lúcia Souza Ribeiro Trindade. Brasília, 2019. 60 p.: il. Dissertação de mestrado. Programa de Pós-Graduação em Fitopatologia, Universidade de Brasília, Brasília. 1. Grão-de-bico – CalonectriaI. I. Universidade de Brasília. PPG/FIT. II. Identificação de espécies de Calonectria spp. e reação de acessos de grão-de-bico a isolados de Calonectria brassicae. Trabalho realizado junto ao Departamento de Fitopatologia do Instituto de Ciências Biológicas da Universidade de Brasília, sob Orientação do Professor Dr. Luiz Eduardo Bassay Blum, com apoio da Empresa Brasileira de Pesquisa Agropecuária. IDENTIFICAÇÃO DE ESPÉCIES DE Calonectria E REAÇÃO DE ACESSOS DE GRÃO-DE-BICO A ISOLADOS DE Calonectria brassicae NARA LÚCIA SOUZA RIBEIRO TRINDADE DISSERTAÇÃO APROVADA em: 17/12/2019 por: __________________________________ Dra. Cléia Santos Cabral UNIDESC (Examinador Externo) __________________________________ Dr. Leonardo Silva Boiteux Embrapa Hortaliças (Examinador Externo – Vinculado ao PPG-FIT) __________________________________ Dr. -
Phylogenetic Analysis of Widely Cultivated Ganoderma in China Based on the Mitochondrial V4-V6 Region of SSU Rdna
Phylogenetic analysis of widely cultivated Ganoderma in China based on the mitochondrial V4-V6 region of SSU rDNA X.W. Zhou1,2, K.Q. Su2 and Y.M. Zhang1 1School of Life and Environment Science, Shanghai Normal University, Shanghai, China 2Key Laboratory of Urban Agriculture (South) Ministry of Agriculture, Plant Biotechnology Research Center, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China Corresponding authors: Y.M. Zhang / X.W. Zhou E-mail: [email protected] / [email protected] Genet. Mol. Res. 14 (1): 886-897 (2015) Received February 6, 2014 Accepted May 15, 2014 Published February 2, 2015 DOI http://dx.doi.org/10.4238/2015.February.2.12 ABSTRACT. Ganoderma mushroom is one of the most prescribed traditional medicines and has been used for centuries, particularly in China, Japan, Korea, and other Asian countries. In this study, different strains of Ganoderma spp and the genetic relationships of the closely related strains were identified and investigated based on the V4-V6 region of mitochondrial small subunit ribosomal DNA of the Ganoderma species. The sizes of the mitochondrial ribosomal DNA regions from different Ganoderma species showed 2 types of sequences, 2.0 or 0.5 kb. A phylogenetic tree was constructed, which revealed a high level of genetic diversity in Ganoderma species. Ganoderma lucidum G05 and G. eupense G09 strains were clustered into a G. resinaceum group. Ganoderma spp G29 and G22 strains were clustered into a G. lucidum group. However, Ganoderma spp G19, G20, and G21 strains were Genetics and Molecular Research 14 (1): 886-897 (2015) ©FUNPEC-RP www.funpecrp.com.br Characterization of V4-V6 region of SSU rDNA of Ganoderma 887 clustered into a single group, the G. -
Dictyostelid Cellular Slime Molds from Caves
John C. Landolt, Steven L. Stephenson, and Michael E. Slay – Dictyostelid cellular slime molds from caves. Journal of Cave and Karst Studies, v. 68, no. 1, p. 22–26. DICTYOSTELID CELLULAR SLIME MOLDS FROM CAVES JOHN C. LANDOLT Department of Biology, Shepherd University, Shepherdstown, WV 2544 USA [email protected] STEVEN L. STEPHENSON Department of Biological Sciences, University of Arkansas, Fayetteville, AR 72701 USA [email protected] MICHAEL E. SLAY The Nature Conservancy, 601 North University Avenue, Little Rock, AR 72205 USA [email protected] Dictyostelid cellular slime molds associated with caves in Alabama, Arkansas, Indiana, Missouri, New York, Oklahoma, South Carolina, Tennessee, West Virginia, Puerto Rico, and San Salvador in the Bahamas were investigated during the period of 1990–2005. Samples of soil material collected from more than 100 caves were examined using standard methods for isolating dictyostelids. At least 17 species were recovered, along with a number of isolates that could not be identified completely. Four cos- mopolitan species (Dictyostelium sphaerocephalum, D. mucoroides, D. giganteum and Polysphondylium violaceum) and one species (D. rosarium) with a more restricted distribution were each recorded from more than 25 different caves, but three other species were present in more than 20 caves. The data gen- erated in the present study were supplemented with all known published and unpublished records of dic- tyostelids from caves in an effort to summarize what is known about their occurrence in this habitat. INTRODUCTION also occur on dung and were once thought to be primarily coprophilous (Raper, 1984). However, perhaps the most Dictyostelid cellular slime molds (dictyostelids) are single- unusual microhabitat for dictyostelids is the soil material celled, eukaryotic, phagotrophic bacterivores usually present found in caves. -
Cylindrocladium Buxicola Nom. Cons. Prop.(Syn. Calonectria
I Promotors: Prof. dr. ir. Monica Höfte Laboratory of Phytopathology, Department of Crop Protection Faculty of Bioscience Engineering Ghent University Dr. ir. Kurt Heungens Institute for Agricultural and Fisheries Research (ILVO) Plant Sciences Unit - Crop Protection Dean: Prof. dr. ir. Guido Van Huylenbroeck Rector: Prof. dr. Anne De Paepe II Bjorn Gehesquière Cylindrocladium buxicola nom. cons. prop. (syn. Calonectria pseudonaviculata) on Buxus: molecular characterization, epidemiology, host resistance and fungicide control Thesis submitted in fulfillment of the requirements for the degree of Doctor (PhD) in Applied Biological Sciences III Dutch translation of the title: Cylindrocladium buxicola nom. cons. prop. (syn. Calonectria pseudonaviculata) in Buxus: moleculaire karakterisering, epidemiologie, waardplantresistentie en chemische bestrijding. Please refer to this work as follows: Gehesquière B. (2014). Cylindrocladium buxicola nom. cons. prop. (syn. Calonectria pseudonaviculata) on Buxus: molecular characterization, epidemiology, host resistance and fungicide control. Phd Thesis. Ghent University, Belgium The author and the promotors give authorisation to consult and to copy parts of this work for personal use only. Any other use is limited by Laws of Copyright. Permission to reproduce any material contained in this work should be obtained from the author. The promotors, The author, Prof. dr. ir. M. Höfte Dr. ir. K. Heungens ir. B. Gehesquière IV Een woordje van dank…. Dit dankwoord schrijven is ongetwijfeld het leukste onderdeel van deze thesis, en een mooie afsluiting van een interessante periode. Terugblikkend op de voorbije vier jaren kan ik enkel maar beamen dat een doctoraat zoveel meer is dan een wetenschappelijke uitdaging. Het is een levensreis in al zijn facetten, waarbij ik mezelf heb leren kennen in al mijn goede en slechte kantjes. -
Kumanasamuha Geaster Sp. Nov., an Anamorph of Chorioactis Geaster from Japan
Mycologia, 101(6), 2009, pp. 871–877. DOI: 10.3852/08-121 # 2009 by The Mycological Society of America, Lawrence, KS 66044-8897 Kumanasamuha geaster sp. nov., an anamorph of Chorioactis geaster from Japan H. Nagao1,2 sequences and morphology. The combination of the Genebank, National Institute of Agrobiological Sciences, three datasets produced similar or stronger support Tsukuba 305-8602, Japan for this lineage. A new family, Chorioactidaceae, was S. Kurogi erected in the Pezizales (Pfister et al 2008) to Miyazaki Prefectural Museum of Nature and History, accommodate Chorioactis and three other genera, Miyazaki 880-0053, Japan Desmazierella, Neournula and Wolfina. Chorioactis geaster has been found in evergreen E. Kiyota broadleaf forests in Kyusyu, Japan (Imazeki 1938, Kyusyu University of Health and Welfare, Nobeoka Imazeki and Otani 1975, Kurogi et al 2002). However 882-8508, Japan these forests are now disappearing due to deforesta- K. Sasatomi tion and replanting with Cryptomeria japonica D. Don Kyusyu Environmental Evaluation Association, and construction of a dam. Chorioactis geaster has Fukuoka 813-0004, Japan been listed as a threatened fungus in the Red Data Book of Japan (2000) because of its global rarity. The occurrence of C. geaster was infrequent (Imazeki Abstract: A new species of Kumanasamuha is de- 1938, Imazeki and Otani 1975) and asexual sporula- scribed and illustrated from axenic single-spore tion of C. geaster was not observed (Imazeki and Otani isolates of Chorioactis geaster. The characteristics of 1975). We have made some observations on the life conidia and hyphae are the same as the dematiaceous cycle of C. geaster and are trying to find ways to hyphomycete observed on decayed trunks of Quercus conserve this endangered fungus (Kurogi et al 2002). -
Zygomycosis Caused by Cunninghamella Bertholletiae in a Kidney Transplant Recipient
Medical Mycology April 2004, 42, 177Á/180 Case report Zygomycosis caused by Cunninghamella bertholletiae in a kidney transplant recipient D. QUINIO*, A. KARAM$, J.-P. LEROY%, M.-C. MOAL§, B. BOURBIGOT§, O. MASURE*, B. SASSOLAS$ & A.-M. LE FLOHIC* Departments of *Microbiology, $Dermatology, %Pathology and §Kidney Transplantation, Brest University Hospital Brest France Downloaded from https://academic.oup.com/mmy/article/42/2/177/964345 by guest on 23 September 2021 Infections caused by Cunninghamella bertholletiae are rare but severe. Only 32 cases have been reported as yet, but in 26 of these this species was a contributing cause of the death of the patient. This opportunistic mould in the order Mucorales infects immunocompromized patients suffering from haematological malignancies or diabetes mellitus, as well as solid organ transplant patients. The lung is the organ most often involved. Two cases of primary cutaneous infection have been previously reported subsequent to soft-tissue injuries. We report a case of primary cutaneous C. bertholletiae zygomycosis in a 54-year-old, insulin-dependent diabetic man who was treated with tacrolimus and steroids after kidney transplantation. No extracutaneous involvement was found. In this patient, the infection may have been related to insulin injections. The patient recovered after an early surgical excision of the lesion and daily administration of itraconazole for 2 months. This case emphasizes the importance of an early diagnosis of cutaneous zygomycosis, which often presents as necrotic-looking lesions. Prompt institution of antifungal therapy and rapid surgical intervention are necessary to improve the prospects of patients who have contracted these potentially severe infections. Keywords Cunninghamella bertholletiae, cutaneous zygomycosis, diabetes mellitus, kidney transplantation Introduction sub-tropical areas.