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Buglossoporus Pulvinus (Pers.) Donk) Входит В Число Редких Видов Макромицетов, Имеющих Высокий Природоохранный Статус Во Многих Странах Европы
УДК 582.284 : 581.527+581.42 (477.54) РЕДКИЙ ГРИБ PIPTOPORUS QUERCINUS (SCHRAD.) P. KARST. ИЗ НАЦИОНАЛЬНОГО ПРИРОДНОГО ПАРКА «ГОМОЛЬШАНСКИЕ ЛЕСА» Ордынец А.В., Акулов А.Ю. Кафедра микологии и фитоиммунологии, Харьковский национальный университет им. В.Н. Каразина пл. Свободы, 4, 61077, г. Харьков, Украина; e-mail: [email protected] Abstract. The article is devoted to a rare macromycete species Piptoporus quercinus (Schrad.) P. Karst., which has the high nature-conservative status and is included to Red lists of many European countries. The information about finding of this species on the territory of National nature park "Gomolshanskie lesa" (Zmiev area of Kharkiv district, Ukraine) is resulted. The localities of species detection on the territory of National park, the morphological, taxonomical and ecological characteristics of species, and the action plan for P. quercinus conservation are specified. Трутовый гриб Piptoporus quercinus (Schrad.) P. Karst. (=Buglossoporus pulvinus (Pers.) Donk) входит в число редких видов макромицетов, имеющих высокий природоохранный статус во многих странах Европы. Этот гриб развивается на старовозрастных дубах (Quercus spp.), и его численность существенно сокращается по мере уничтожения коренных дубрав [2; 5; 13; 15-19; 21; 22]. В Украине вид Piptoporus quercinus известен всего по нескольким находкам, и до недавнего времени был обнаружен на территории двух ботанико-географических регионов страны: Карпат и Закарпатья [1; 4]. В период 2002-2006 гг. этот вид был впервые обнаружен нами в Левобережной Украине: на валежных стволах и пнях Quercus robur L. в различных кварталах Национального природного парка «Гомольшанские леса». Учитывая редкость этого вида в общемировом масштабе, мы считаем необходимым привести подробную морфолого-таксономическую и экологическую характеристику этого вида, описать локалитеты его обнаружения на территории парка, а также мероприятия, необходимые для его сохранения. -
Diversity of Polyporales in the Malay Peninsular and the Application of Ganoderma Australe (Fr.) Pat
DIVERSITY OF POLYPORALES IN THE MALAY PENINSULAR AND THE APPLICATION OF GANODERMA AUSTRALE (FR.) PAT. IN BIOPULPING OF EMPTY FRUIT BUNCHES OF ELAEIS GUINEENSIS MOHAMAD HASNUL BIN BOLHASSAN FACULTY OF SCIENCE UNIVERSITY OF MALAYA KUALA LUMPUR 2013 DIVERSITY OF POLYPORALES IN THE MALAY PENINSULAR AND THE APPLICATION OF GANODERMA AUSTRALE (FR.) PAT. IN BIOPULPING OF EMPTY FRUIT BUNCHES OF ELAEIS GUINEENSIS MOHAMAD HASNUL BIN BOLHASSAN THESIS SUBMITTED IN FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY INSTITUTE OF BIOLOGICAL SCIENCES FACULTY OF SCIENCE UNIVERSITY OF MALAYA KUALA LUMPUR 2013 UNIVERSITI MALAYA ORIGINAL LITERARY WORK DECLARATION Name of Candidate: MOHAMAD HASNUL BIN BOLHASSAN (I.C No: 830416-13-5439) Registration/Matric No: SHC080030 Name of Degree: DOCTOR OF PHILOSOPHY Title of Project Paper/Research Report/Disertation/Thesis (“this Work”): DIVERSITY OF POLYPORALES IN THE MALAY PENINSULAR AND THE APPLICATION OF GANODERMA AUSTRALE (FR.) PAT. IN BIOPULPING OF EMPTY FRUIT BUNCHES OF ELAEIS GUINEENSIS. Field of Study: MUSHROOM DIVERSITY AND BIOTECHNOLOGY I do solemnly and sincerely declare that: 1) I am the sole author/writer of this work; 2) This Work is original; 3) Any use of any work in which copyright exists was done by way of fair dealing and for permitted purposes and any excerpt or extract from, or reference to or reproduction of any copyright work has been disclosed expressly and sufficiently and the title of the Work and its authorship have been acknowledge in this Work; 4) I do not have any actual -
Ten Principles for Conservation Translocations of Threatened Wood- Inhabiting Fungi
Ten principles for conservation translocations of threatened wood- inhabiting fungi Jenni Nordén 1, Nerea Abrego 2, Lynne Boddy 3, Claus Bässler 4,5 , Anders Dahlberg 6, Panu Halme 7,8 , Maria Hällfors 9, Sundy Maurice 10 , Audrius Menkis 6, Otto Miettinen 11 , Raisa Mäkipää 12 , Otso Ovaskainen 9,13 , Reijo Penttilä 12 , Sonja Saine 9, Tord Snäll 14 , Kaisa Junninen 15,16 1Norwegian Institute for Nature Research, Gaustadalléen 21, NO-0349 Oslo, Norway. 2Dept of Agricultural Sciences, P.O. Box 27, FI-00014 University of Helsinki, Finland. 3Cardiff School of Biosciences, Sir Martin Evans Building, Museum Avenue, Cardiff CF10 3AX, UK 4Bavarian Forest National Park, D-94481 Grafenau, Germany. 5Technical University of Munich, Chair for Terrestrial Ecology, D-85354 Freising, Germany. 6Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, P.O.Box 7026, 750 07 Uppsala, Sweden. 7Department of Biological and Environmental Science, P.O. Box 35, FI-40014 University of Jyväskylä, Finland. 8School of Resource Wisdom, P.O. Box 35, FI-40014 University of Jyväskylä, Finland. 9Organismal and Evolutionary Biology Research Programme, P.O. Box 65, FI-00014 University of Helsinki, Finland. 10 Section for Genetics and Evolutionary Biology, University of Oslo, Blindernveien 31, 0316 Oslo, Norway. 11 Finnish Museum of Natural History, P.O. Box 7, FI-00014 University of Helsinki, Finland. 12 Natural Resources Institute Finland (Luke), Latokartanonkaari 9, FI-00790 Helsinki, Finland. 13 Centre for Biodiversity Dynamics, Department of Biology, Norwegian University of Science and Technology, N-7491 Trondheim, Norway. 14 Artdatabanken, Swedish University of Agricultural Sciences, P.O. Box 7007, SE-75007 Uppsala, Sweden. -
Genome-Wide Identification and Classification of MIKC-Type MADS
He et al. BMC Plant Biology (2019) 19:223 https://doi.org/10.1186/s12870-019-1836-5 RESEARCH ARTICLE Open Access Genome-wide identification and classification of MIKC-type MADS-box genes in Streptophyte lineages and expression analyses to reveal their role in seed germination of orchid Chunmei He1, Can Si1,2, Jaime A. Teixeira da Silva3, Mingzhi Li4 and Jun Duan1* Abstract Background: MADS-box genes play crucial roles in plant floral organ formation and plant reproductive development. However, there is still no information on genome-wide identification and classification of MADS-box genes in some representative plant species. A comprehensive investigation of MIKC-type genes in the orchid Dendrobium officinale is still lacking. Results: Here we conducted a genome-wide analysis of MADS-box proteins from 29 species. In total, 1689 MADS-box proteins were identified. Two types of MADS-boxgenes,termedtypeIandII,werefoundinland plants, but not in liverwort. The SQUA, DEF/GLO, AG and SEP subfamilies existed in all the tested flowering plants, while SQUA was absent in the gymnosperm Ginkgo biloba, and no genes of the four subfamilies were found in a charophyte, liverwort, mosses, or lycophyte. This strongly corroborates the notion that clades of floral organ identity genes led to the evolution of flower development in flowering plants. Nine subfamilies of MIKCC genes were present in two orchids, D. officinale and Phalaenopsis equestris,whiletheTM8,FLC,AGL15 and AGL12 subfamilies may be lost. In addition, the four clades of floral organ identity genes in both orchids displayed a conservative and divergent expression pattern. Only three MIKC-type genes were induced by cold stress in D. -
Collecting and Recording Fungi
British Mycological Society Recording Network Guidance Notes COLLECTING AND RECORDING FUNGI A revision of the Guide to Recording Fungi previously issued (1994) in the BMS Guides for the Amateur Mycologist series. Edited by Richard Iliffe June 2004 (updated August 2006) © British Mycological Society 2006 Table of contents Foreword 2 Introduction 3 Recording 4 Collecting fungi 4 Access to foray sites and the country code 5 Spore prints 6 Field books 7 Index cards 7 Computers 8 Foray Record Sheets 9 Literature for the identification of fungi 9 Help with identification 9 Drying specimens for a herbarium 10 Taxonomy and nomenclature 12 Recent changes in plant taxonomy 12 Recent changes in fungal taxonomy 13 Orders of fungi 14 Nomenclature 15 Synonymy 16 Morph 16 The spore stages of rust fungi 17 A brief history of fungus recording 19 The BMS Fungal Records Database (BMSFRD) 20 Field definitions 20 Entering records in BMSFRD format 22 Locality 22 Associated organism, substrate and ecosystem 22 Ecosystem descriptors 23 Recommended terms for the substrate field 23 Fungi on dung 24 Examples of database field entries 24 Doubtful identifications 25 MycoRec 25 Recording using other programs 25 Manuscript or typescript records 26 Sending records electronically 26 Saving and back-up 27 Viruses 28 Making data available - Intellectual property rights 28 APPENDICES 1 Other relevant publications 30 2 BMS foray record sheet 31 3 NCC ecosystem codes 32 4 Table of orders of fungi 34 5 Herbaria in UK and Europe 35 6 Help with identification 36 7 Useful contacts 39 8 List of Fungus Recording Groups 40 9 BMS Keys – list of contents 42 10 The BMS website 43 11 Copyright licence form 45 12 Guidelines for field mycologists: the practical interpretation of Section 21 of the Drugs Act 2005 46 1 Foreword In June 2000 the British Mycological Society Recording Network (BMSRN), as it is now known, held its Annual Group Leaders’ Meeting at Littledean, Gloucestershire. -
Phylogenetic Position and Taxonomy of Kusaghiporia Usambarensis Gen
Mycology An International Journal on Fungal Biology ISSN: 2150-1203 (Print) 2150-1211 (Online) Journal homepage: http://www.tandfonline.com/loi/tmyc20 Phylogenetic position and taxonomy of Kusaghiporia usambarensis gen. et sp. nov. (Polyporales) Juma Mahmud Hussein, Donatha Damian Tibuhwa & Sanja Tibell To cite this article: Juma Mahmud Hussein, Donatha Damian Tibuhwa & Sanja Tibell (2018): Phylogenetic position and taxonomy of Kusaghiporia usambarensis gen. et sp. nov. (Polyporales), Mycology, DOI: 10.1080/21501203.2018.1461142 To link to this article: https://doi.org/10.1080/21501203.2018.1461142 © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. Published online: 15 Apr 2018. Submit your article to this journal View related articles View Crossmark data Full Terms & Conditions of access and use can be found at http://www.tandfonline.com/action/journalInformation?journalCode=tmyc20 MYCOLOGY, 2018 https://doi.org/10.1080/21501203.2018.1461142 Phylogenetic position and taxonomy of Kusaghiporia usambarensis gen. et sp. nov. (Polyporales) Juma Mahmud Husseina,b, Donatha Damian Tibuhwab and Sanja Tibella aInstitute of Organismal Biology, Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden; bDepartment of Molecular Biology and Biotechnology, College of Natural & Applied Sciences, University of Dar es Salaam, Dar es Salaam, Tanzania ABSTRACT ARTICLE HISTORY A large polyporoid mushroom from the West Usambara Mountains in North-eastern Tanzania Received 17 November 2017 produces dark brown, up to 60-cm large fruiting bodies that at maturity may weigh more than Accepted 2 April 2018 10 kg. It has a high rate of mycelial growth and regeneration and was found growing on both dry KEYWORDS and green leaves of shrubs; attached to the base of living trees, and it was also observed to Kusaghiporia; molecular degrade dead snakes and insects accidentally coming into contact with it. -
Notes, Outline and Divergence Times of Basidiomycota
Fungal Diversity (2019) 99:105–367 https://doi.org/10.1007/s13225-019-00435-4 (0123456789().,-volV)(0123456789().,- volV) Notes, outline and divergence times of Basidiomycota 1,2,3 1,4 3 5 5 Mao-Qiang He • Rui-Lin Zhao • Kevin D. Hyde • Dominik Begerow • Martin Kemler • 6 7 8,9 10 11 Andrey Yurkov • Eric H. C. McKenzie • Olivier Raspe´ • Makoto Kakishima • Santiago Sa´nchez-Ramı´rez • 12 13 14 15 16 Else C. Vellinga • Roy Halling • Viktor Papp • Ivan V. Zmitrovich • Bart Buyck • 8,9 3 17 18 1 Damien Ertz • Nalin N. Wijayawardene • Bao-Kai Cui • Nathan Schoutteten • Xin-Zhan Liu • 19 1 1,3 1 1 1 Tai-Hui Li • Yi-Jian Yao • Xin-Yu Zhu • An-Qi Liu • Guo-Jie Li • Ming-Zhe Zhang • 1 1 20 21,22 23 Zhi-Lin Ling • Bin Cao • Vladimı´r Antonı´n • Teun Boekhout • Bianca Denise Barbosa da Silva • 18 24 25 26 27 Eske De Crop • Cony Decock • Ba´lint Dima • Arun Kumar Dutta • Jack W. Fell • 28 29 30 31 Jo´ zsef Geml • Masoomeh Ghobad-Nejhad • Admir J. Giachini • Tatiana B. Gibertoni • 32 33,34 17 35 Sergio P. Gorjo´ n • Danny Haelewaters • Shuang-Hui He • Brendan P. Hodkinson • 36 37 38 39 40,41 Egon Horak • Tamotsu Hoshino • Alfredo Justo • Young Woon Lim • Nelson Menolli Jr. • 42 43,44 45 46 47 Armin Mesˇic´ • Jean-Marc Moncalvo • Gregory M. Mueller • La´szlo´ G. Nagy • R. Henrik Nilsson • 48 48 49 2 Machiel Noordeloos • Jorinde Nuytinck • Takamichi Orihara • Cheewangkoon Ratchadawan • 50,51 52 53 Mario Rajchenberg • Alexandre G. -
Diversity and Distribution of Polyporales in Peninsular Malaysia (Kepelbagaian Dan Taburan Polyporales Di Semenanjung Malaysia)
Sains Malaysiana 41(2)(2012): 155–161 Diversity and Distribution of Polyporales in Peninsular Malaysia (Kepelbagaian dan Taburan Polyporales di Semenanjung Malaysia) MOHAMAD HASNUL BOLHASSAN, NOORLIDAH ABDULLAH*, VIKINESWARY SABARATNAM, HATTORI TSUTOMU, SUMAIYAH ABDULLAH, NORASWATI MOHD. NOOR RASHID & MD. YUSOFF MUSA ABSTRACT Macrofungi of the order Polyporales are among the most important wood decomposers and caused economic losses by decaying the wood in standing trees, logs and in sawn timber. Diversity and distribution of Polyporales in Peninsular Malaysia was investigated by collecting basidiocarps from trunks, branches, exposed roots and soil from six states (Johor, Kedah, Kelantan, Negeri Sembilan, Pahang and Selangor) in Peninsular Malaysia and Federal Territory Kuala Lumpur. This study showed that the diversity of Polyporales were less diverse than previously reported. The study identified 60 species from five families; Fomitopsidaceae, Ganodermataceae, Meruliaceae, Meripilaceae, and Polyporaceae. The common species of Polyporales collected were Fomitopsis feei, Amauroderma subrugosum, Ganoderma australe, Earliella scabrosa, Lentinus squarrosulus, Microporus xanthopus, Pycnoporus sanguineus and Trametes menziesii. Keywords: Macrofungi; Polyporales ABSTRAK Makrokulat daripada Order Polyporales adalah antara pereput kayu yang sangat penting dan telah diketahui bahawa banyak spesies Polyporales menyebabkan kerugian daripada aspek ekonomi dengan menyebabkan pereputan pada pokok- pokok kayu, balak serta kayu gergaji. Kepelbagaian dan -
Structural Diversification and Neo-Functionalization During Floral
Nucleic Acids Research, 2003, Vol. 31, No. 15 4401±4409 DOI: 10.1093/nar/gkg642 Structural diversi®cation and neo-functionalization during ¯oral MADS-box gene evolution by C-terminal frameshift mutations Michiel Vandenbussche*, GuÈ nter Theissen1, Yves Van de Peer and Tom Gerats Department of Plant Systems Biology, Flanders Interuniversity Institute for Biotechnology (VIB), Ghent University, K.L. Ledeganckstraat 35, B-9000 Gent, Belgium and 1Lehrstuhl for Genetics, Friedrich Schiller University of Jena, Philosophenweg 12, D-07743 Jena, Germany Received April 29, 2003; Revised and Accepted June 10, 2003 ABSTRACT regulators (called homeotic selector genes). These variations may simply represent differences in the expression patterns of Frameshift mutations generally result in loss-of- an otherwise standard set of genes that determine the function changes since they drastically alter the underlying morphogenetic processes. On the other hand, protein sequence downstream of the frameshift site, changes in the coding sequence might also lead to changes in besides creating premature stop codons. Here we gene function. Extensive analysis of plant ¯oral developmen- present data suggesting that frameshift mutations tal mutants during the last decade has revealed the importance in the C-terminal domain of speci®c ancestral of the MADS-box transcription factor family in ¯ower MADS-box genes may have contributed to the struc- development and plant architecture. The identity of the ¯oral tural and functional divergence of the MADS-box organs has been shown to be governed by the combined gene family. We have identi®ed putative frameshift activity of speci®c MADS-box ¯oral homeotic genes and it mutations in the conserved C-terminal motifs of the has been suggested that gene duplications followed by B-function DEF/AP3 subfamily, the A-function functional diversi®cation within the MADS-box gene family SQUA/AP1 subfamily and the E-function AGL2 sub- must have been key processes in ¯oral evolution (1±3). -
Text of My Dissertation
Abstract COKER, JEFFREY SCOTT. The systemic response to fire damage in tomato plants: A case study in the development of methods for gene expression analysis using sequence data. (Under the direction of Dr. Eric Davies.) Fire is a natural component of most terrestrial ecosystems and can act as a local wound stimulus to plants. The ultimate goal of this work was to characterize the array of transcripts which systemically accumulate in plants after fire damage. Before this could be accomplished, substantial development of methods for gene expression analysis using sequence data was necessary. This involved developing methods for identifying contamination in DNA sequence data (Chapter 2), identifying over 78,000 false sequences in GenBank and several thousand more in the indica rice genome (Chapter 2), developing a novel method for identifying housekeeping controls using sequence data (Chapter 3), performing relative expression analyses for 127 potential housekeeping control transcripts (Chapter 3), and characterizing 23 transcripts which encode all 13 subunits of vacuolar H+- ATPases in tomato plants (Chapter 4). A subtractive cDNA library served as a starting point to identify and characterize 9 novel tomato transcripts systemically up-regulated in leaves in the first hour after a distant leaf is flame wounded (Chapters 5). Real-time RT-PCR using leaf RNA isolated at different times after flaming showed that the most common pattern of transcript accumulation was an increase within 30 to 60 minutes, followed by a return to basal levels within 3 hours. Expression analyses also showed that most up-regulated transcripts were already present in unwounded tissues. A total of 46 different transcripts were identified from the subtractive cDNA library (Chapters 6). -
ERAMOSA Controls Lateral Branching in Snapdragon Chiara Mizzotti1, Bianca M
www.nature.com/scientificreports OPEN ERAMOSA controls lateral branching in snapdragon Chiara Mizzotti1, Bianca M. Galliani1, Ludovico Dreni1,†, Hans Sommer2, Aureliano Bombarely3 & Simona Masiero1 Received: 06 September 2016 Plant forms display a wide variety of architectures, depending on the number of lateral branches, Accepted: 16 December 2016 internode elongation and phyllotaxy. These are in turn determined by the number, the position and the Published: 01 February 2017 fate of the Axillary Meristems (AMs). Mutants that affect AM determination during the vegetative phase have been isolated in several model plants. Among these genes, the GRAS transcription factor LATERAL SUPPRESSOR (Ls) plays a pivotal role in AM determination during the vegetative phase. Hereby we characterize the phylogenetic orthologue of Ls in Antirrhinum, ERAMOSA (ERA). Our data supported ERA control of AM formation during both the vegetative and the reproductive phase in snapdragon. A phylogenetic analysis combined with an analysis of the synteny of Ls in several species strongly supported the hypothesis that ERA is a phylogenetic orthologue of Ls, although it plays a broader role. During the reproductive phase ERA promotes the establishment of the stem niche at the bract axis but, after the reproductive transition, it is antagonized by the MADS box transcription factor SQUAMOSA (SQUA). Surprisingly double mutant era squa plants display a squa phenotype developing axillary meristems, which can eventually turn into inflorescences or flowers. The aerial plant body derives from the Shoot Apical Meristem (SAM), through the iterative production of phy- tomers. A phytomer unit is comprised of a node, to which a leaf is anchored, the corresponding internode and an Axillary Meristem (AM) at the leaf axil1. -
January 2015
Sussex Botanical Recording Society Newsletter No. 79 http://www.sussexflora.org.uk January 2015 Chairman’s Message Members getting together at the November Get- It is pleasant to look back on the proceedings of our together enjoyed a really excellent talk by David Society, to remember companions in the field and Streeter on the Rothschild Reserves in Sussex, even familiar faces at the indoor meetings. At the present if they were too modest to show off their own time, of course, we remember Mary in particular, knowledge in the Salicornia challenge posed at the who gave shape and form to the SBRS, who always end. David is of course celebrated as a leading disseminated snippets of information to educate and ecologist and botanist who has been a long-term enthuse, who set us intriguing challenges (not member of the SBRS, but not everyone will be aware normally on Salicornia!) and congratulated us on our that he was in at the very beginning of the Sussex finds. We have also lost other dear members over the Plant Atlas. past year and these are recalled elsewhere in this issue. As botanists, however, we always have the On 26 November 1965 Frank Penfold of the Sussex incentive to look forward – to the coming seasons Wildlife Trust chaired a meeting in a room of Kings and a multitude of species old and new to us, to days College, University of London to form the Sussex in the field in congenial company, to the indoor Flora Committee. Twelve botanists had been invited events at which we catch up with each other – and to attend: Francis Rose who arranged the venue; the Society will go forward, I am confident, building David Philcox of Kew; Ted Wallace and Ron on the expertise and traditions established by Mary Boniface, fine vascular and cryptogamic field and the others who sat down together that day in botanists based in Surrey; Oliver Buckle, the man November 1965.