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1 1 DNA Barcodes Reveal Deeply Neglected Diversity and Numerous
Page 1 of 57 1 DNA barcodes reveal deeply neglected diversity and numerous invasions of micromoths in 2 Madagascar 3 4 5 Carlos Lopez-Vaamonde1,2, Lucas Sire2, Bruno Rasmussen2, Rodolphe Rougerie3, 6 Christian Wieser4, Allaoui Ahamadi Allaoui 5, Joël Minet3, Jeremy R. deWaard6, Thibaud 7 Decaëns7, David C. Lees8 8 9 1 INRA, UR633, Zoologie Forestière, F- 45075 Orléans, France. 10 2 Institut de Recherche sur la Biologie de l’Insecte, UMR 7261 CNRS Université de Tours, UFR 11 Sciences et Techniques, Tours, France. 12 3Institut de Systématique Evolution Biodiversité (ISYEB), Muséum national d'Histoire naturelle, 13 CNRS, Sorbonne Université, EPHE, 57 rue Cuvier, CP 50, 75005 Paris, France. 14 4 Landesmuseum für Kärnten, Abteilung Zoologie, Museumgasse 2, 9020 Klagenfurt, Austria 15 5 Department of Entomology, University of Antananarivo, Antananarivo 101, Madagascar 16 6 Centre for Biodiversity Genomics, University of Guelph, 50 Stone Road E., Guelph, ON 17 N1G2W1, Canada 18 7Centre d'Ecologie Fonctionnelle et Evolutive (CEFE UMR 5175, CNRS–Université de Genome Downloaded from www.nrcresearchpress.com by UNIV GUELPH on 10/03/18 19 Montpellier–Université Paul-Valéry Montpellier–EPHE), 1919 Route de Mende, F-34293 20 Montpellier, France. 21 8Department of Life Sciences, Natural History Museum, Cromwell Road, SW7 5BD, UK. 22 23 24 Email for correspondence: [email protected] For personal use only. This Just-IN manuscript is the accepted prior to copy editing and page composition. It may differ from final official version of record. 1 Page 2 of 57 25 26 Abstract 27 Madagascar is a prime evolutionary hotspot globally, but its unique biodiversity is under threat, 28 essentially from anthropogenic disturbance. -
DNA Barcodes Reveal Deeply Neglected Diversity and Numerous Invasions of Micromoths in Madagascar
Genome DNA barcodes reveal deeply neglected diversity and numerous invasions of micromoths in Madagascar Journal: Genome Manuscript ID gen-2018-0065.R2 Manuscript Type: Article Date Submitted by the 17-Jul-2018 Author: Complete List of Authors: Lopez-Vaamonde, Carlos; Institut National de la Recherche Agronomique (INRA), ; Institut de Recherche sur la Biologie de l’Insecte (IRBI), Sire, Lucas; Institut de Recherche sur la Biologie de l’Insecte Rasmussen,Draft Bruno; Institut de Recherche sur la Biologie de l’Insecte Rougerie, Rodolphe; Institut Systématique, Evolution, Biodiversité (ISYEB), Wieser, Christian; Landesmuseum für Kärnten Ahamadi, Allaoui; University of Antananarivo, Department Entomology Minet, Joël; Institut de Systematique Evolution Biodiversite deWaard, Jeremy; Biodiversity Institute of Ontario, University of Guelph, Decaëns, Thibaud; Centre d'Ecologie Fonctionnelle et Evolutive (CEFE UMR 5175, CNRS–Université de Montpellier–Université Paul-Valéry Montpellier–EPHE), , CEFE UMR 5175 CNRS Lees, David; Natural History Museum London Keyword: Africa, invasive alien species, Lepidoptera, Malaise trap, plant pests Is the invited manuscript for consideration in a Special 7th International Barcode of Life Issue? : https://mc06.manuscriptcentral.com/genome-pubs Page 1 of 57 Genome 1 DNA barcodes reveal deeply neglected diversity and numerous invasions of micromoths in 2 Madagascar 3 4 5 Carlos Lopez-Vaamonde1,2, Lucas Sire2, Bruno Rasmussen2, Rodolphe Rougerie3, 6 Christian Wieser4, Allaoui Ahamadi Allaoui 5, Joël Minet3, Jeremy R. deWaard6, Thibaud 7 Decaëns7, David C. Lees8 8 9 1 INRA, UR633, Zoologie Forestière, F- 45075 Orléans, France. 10 2 Institut de Recherche sur la Biologie de l’Insecte, UMR 7261 CNRS Université de Tours, UFR 11 Sciences et Techniques, Tours, France. -
Fauna Lepidopterologica Volgo-Uralensis" 150 Years Later: Changes and Additions
©Ges. zur Förderung d. Erforschung von Insektenwanderungen e.V. München, download unter www.zobodat.at Atalanta (August 2000) 31 (1/2):327-367< Würzburg, ISSN 0171-0079 "Fauna lepidopterologica Volgo-Uralensis" 150 years later: changes and additions. Part 5. Noctuidae (Insecto, Lepidoptera) by Vasily V. A n ik in , Sergey A. Sachkov , Va d im V. Z o lo t u h in & A n drey V. Sv ir id o v received 24.II.2000 Summary: 630 species of the Noctuidae are listed for the modern Volgo-Ural fauna. 2 species [Mesapamea hedeni Graeser and Amphidrina amurensis Staudinger ) are noted from Europe for the first time and one more— Nycteola siculana Fuchs —from Russia. 3 species ( Catocala optata Godart , Helicoverpa obsoleta Fabricius , Pseudohadena minuta Pungeler ) are deleted from the list. Supposedly they were either erroneously determinated or incorrect noted from the region under consideration since Eversmann 's work. 289 species are recorded from the re gion in addition to Eversmann 's list. This paper is the fifth in a series of publications1 dealing with the composition of the pres ent-day fauna of noctuid-moths in the Middle Volga and the south-western Cisurals. This re gion comprises the administrative divisions of the Astrakhan, Volgograd, Saratov, Samara, Uljanovsk, Orenburg, Uralsk and Atyraus (= Gurjev) Districts, together with Tataria and Bash kiria. As was accepted in the first part of this series, only material reliably labelled, and cover ing the last 20 years was used for this study. The main collections are those of the authors: V. A n i k i n (Saratov and Volgograd Districts), S. -
Genome Analysis of a Novel Clade B Betabaculovirus Isolated from the Legume Pest Matsumuraeses Phaseoli (Lepidoptera: Tortricidae)
viruses Article Genome Analysis of a Novel Clade b Betabaculovirus Isolated from the Legume Pest Matsumuraeses phaseoli (Lepidoptera: Tortricidae) Ruihao Shu 1, Qian Meng 1, Lin Miao 1, Hongbin Liang 2, Jun Chen 2, Yuan Xu 2, Luqiang Cheng 1,3, Wenyi Jin 1,4, Qilian Qin 1 and Huan Zhang 1,* 1 State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China; [email protected] (R.S.); [email protected] (Q.M.); [email protected] (L.M.); [email protected] (L.C.); [email protected] (W.J.); [email protected] (Q.Q.) 2 National Animal Collection Resource Center, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China; [email protected] (H.L.); [email protected] (J.C.); [email protected] (Y.X.) 3 College of Horticulture and Plant Protection, Yangzhou University, Yangzhou 225009, China 4 College of Life Sciences, Hebei University, Baoding 071002, China * Correspondence: [email protected] Received: 25 August 2020; Accepted: 20 September 2020; Published: 23 September 2020 Abstract: Matsumuraeses phaseoli is a Lepidopteran pest that primarily feeds on numerous species of cultivated legumes, such as Glycine and Phaseolus. It is widely distributed in northeast Asia. A novel granulovirus, designated as Matsumuraeses phaseoli granulovirus (MaphGV), was isolated from pathogenic M. phaseoli larvae that dwell in rolled leaves of Astragalus membranaceus, a Chinese medicinal herb. In this study, using next-generation sequencing, we report the complete genome of MaphGV. MaphGV genome comprises a double-stranded DNA of 116,875 bp, with 37.18% GC content. -
Faunistische Angaben Über Pterophoridae Vom Sokotra Archipel Mit Der Neubeschreibung Von Agdistis Haghieri Sp
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Zeitschrift der Arbeitsgemeinschaft Österreichischer Entomologen Jahr/Year: 2009 Band/Volume: 61 Autor(en)/Author(s): Arenberger Ernst Artikel/Article: Faunistische Angaben über Pterophoridae vom Sokotra Archipel mit der Neubeschreibung von Agdistis haghieri sp. n. (Lepidoptera). 95-100 ©Arbeitsgemeinschaft Österreichischer Entomologen, Wien, download unter www.biologiezentrum.at Z.Arb.Gem.Öst.Ent. 61 95-100 Wien, 27. 11. 2009 ISSN 0375-5223 Faunistische Angaben über Pterophoridae vom Sokotra Archipel mit der Neubeschreibung von Agdistis haghieri sp. n. (Lepidoptera) Ernst ARENBERGER Abstract Six species of Pterophoridae are listed as new for the fauna of the Sokotra Archipelago, among these Agdistis haghieri sp. nov. is introduced as new to the literature. Its genitalia are depicted and the collection sites of the moths are figured. Keywords: Lepidoptera, Pterophoridae, Agdistis haghieri sp. nov., Palaearctic region, Fauna of Sokotra Archipelago. Zusammenfassung Sechs Pterophoridae-Arten werden neu für die Fauna des Sokotra Archipels gemeldet, davon wird Agdistis haghieri sp. nov. als neue Art in die Literatur eingeführt. Dessen Genitale wird abgebildet und die Fundplätze werden durch Fotos dargestellt. Einleitung Der Sokotra Archipel liegt geografisch am Schnittpunkt der paläarktischen und äthiopi- schen Fauna. Vorliegende Aufsammlungen von Pterophoridae aus dieser Region bestäti- gen Angaben früherer Autoren (WALSINGHAM, 1900, REBEL, 1907, MEYRICK, 1933 und AMSEL, 1961), dass die Lepidopterenfauna des Archipels mehrheitlich aus paläarktischen und kosmopolitisch lebenden Taxa besteht. Bisher waren mit Agdistis minima WALSINGHAM, 1900, Agdistis insidiatrix MEYRICK, 1933, Megalorhipida leucodactyla (FABRICIUS, 1794), Megalorhipida subtilis (REBEL, 1907) und Deuterocopus socotranus REBEL, 1907 nur fünf Pterophoridae-Arten bekannt. -
Plume Moths of Family Pterophoridae (Microlepidoptera) from Shiwaliks of North-West India
Rec. zool. Surv. India: Vol. 119(3)/ 256-262, 2019 ISSN (Online) : 2581-8686 DOI: 10.26515/rzsi/v119/i3/2019/143334 ISSN (Print) : 0375-1511 Plume moths of family Pterophoridae (Microlepidoptera) from Shiwaliks of North-West India H. S. Pooni1*, P. C. Pathania2 and Amit Katewa1 1Department of Zoology and Environmental Sciences, Punjabi University, Patiala - 1470002, Punjab, India; [email protected] 2Zoological Survey of India, M-Block, New Alipore, Kolkata - 700 053, West Bengal, India Abstract Survey tours were undertaken for the collection of Pterophorid moths from various localities falling in the jurisdiction of North-Western Shiwaliks. In all, 26 species belonged to 18 genera of the family Pterophoridae(25 species of subfamily and remarks for all the species are also provided in detail. Pterophorinae and 01 Deuterocopinae) were examined and identified. The keys to subfamilies, synonymy, distribution Keywords: Microlepidoptera, North-West, Plume Moths, Pterophoridae Introduction of these moths, the taxonomical study is very difficult and the same moths group poses very serious problems The Microlepidoptera is one of the large groups of in field collections, pinning, stretching, labelling and as moths under order Lepidoptera. On world basis, 45735 well as in identification. Keeping in mind all above, the species belonging to 4626 genera of 73 families under 19 present research is undertaken on the Pterophorid moths superfamilies are present. The superfamily Pterophoroidea from the area under reference. is a unique group from other Lepidopteran insects is having slender moths, long and slender legs and long Material and Methods abdomen and wings narrow clefted. The wings are narrow. -
Biodiversa-Project Description-Final Version-110213
1.A. Detailed description of the research area and research plan Context of the proposal Biological invasions (bioinvasions) are defined as the successful establishment and spread of species outside their native range. They act as a major driver of global changes in species distribution. Diverse organisms and ecosystems may be involved, and although not all invasions have a negative impact, the ecological consequences often include the loss of native biological diversity and changes in community structure and ecosystem activity. There may also be additional negative effects on agriculture, forests, fisheries, and human health. National governments, intergovernmental structures like the European Commission and international organizations such as EPPO, CABI and IUCN have therefore mobilized to (i) introduce international laws on invasive species, (ii) organize international networks of scientists and stakeholders to study bioinvasions, and (iii) formalize the cooperation between national environmental or agricultural protection agencies (e.g. the French Agence Nationale de Sécurité Sanitaire, ANSES). Several billion euros are spent annually to address the problems caused by bioinvasions and the scientific community has focused on predicting and controlling future invasions by understanding how they occur. A peer-reviewed journal entitled "Biological Invasions” has been published since 1999. Ecologists have long drawn attention to the negative ecological effects of invasive species, whereas the evolutionary aspects of bioinvasions have received comparatively little attention. This reflects the fact that: i) invasive populations were thought to experience significant bottlenecks during their introduction to new environments and thus possess a limited potential to evolve; and ii) evolution was considered too slow to play a significant role given the relatively short timescale of the invasion process. -
The Microlepidopterous Fauna of Sri Lanka, Formerly Ceylon, Is Famous
ON A COLLECTION OF SOME FAMILIES OF MICRO- LEPIDOPTERA FROM SRI LANKA (CEYLON) by A. DIAKONOFF Rijksmuseum van Natuurlijke Historie, Leiden With 65 text-figures and 18 plates CONTENTS Preface 3 Cochylidae 5 Tortricidae, Olethreutinae, Grapholitini 8 „ „ Eucosmini 23 „ „ Olethreutini 66 „ Chlidanotinae, Chlidanotini 78 „ „ Polyorthini 79 „ „ Hilarographini 81 „ „ Phricanthini 81 „ Tortricinae, Tortricini 83 „ „ Archipini 95 Brachodidae 98 Choreutidae 102 Carposinidae 103 Glyphipterigidae 108 A list of identified species no A list of collecting localities 114 Index of insect names 117 Index of latin plant names 122 PREFACE The microlepidopterous fauna of Sri Lanka, formerly Ceylon, is famous for its richness and variety, due, without doubt, to the diversified biotopes and landscapes of this beautiful island. In spite of this, there does not exist a survey of its fauna — except a single contribution, by Lord Walsingham, in Moore's "Lepidoptera of Ceylon", already almost a hundred years old, and a number of small papers and stray descriptions of new species, in various journals. The authors of these papers were Walker, Zeller, Lord Walsingham and a few other classics — until, starting with 1905, a flood of new descriptions 4 ZOOLOGISCHE VERHANDELINGEN I93 (1982) and records from India and Ceylon appeared, all by the hand of Edward Meyrick. He was almost the single specialist of these faunas, until his death in 1938. To this great Lepidopterist we chiefly owe our knowledge of all groups of Microlepidoptera of Sri Lanka. After his death this information stopped abruptly. In the later years great changes have taken place in the tropical countries. We are now facing, alas, the disastrously quick destruction of natural bio- topes, especially by the reckless liquidation of the tropical forests. -
Revision of the Genus Acontia Ochsenheimer, 1816 and the Tribus Acontiini Guenée, 1841 (Old World) (Lepidoptera: Noctuidae Acontiinae) by H
Esperiana Band 15: 359-373 Schwanfeld, 12. Januar 2010 ISBN 978-3-938249-10-9 Revision of the genus Acontia OCHSENHEIMER, 1816 and the tribus Acontiini GUENÉE, 1841 (Old World) (Lepidoptera: Noctuidae Acontiinae) by H. H. HACKER, A. LEGRAIN and M. FIBIGER (Esperiana 14: 7-533) Corrigenda and Supplementa (Plates 57, 64) by Hermann H. HACKER Abstract This paper contains some corrigenda of the Acontia revision, published in 2008, and results of several recent investigations made since the publication of the revision. It includes the description of two new species, Acontia hausmanni spec. nov. (Kenya), Acontia eburnea spec. nov. (Ivory Coast), and the following additional taxonomic changes: Acontia OCHSENHEIMER, 1816 = Hypercalymnia HAMPSON, 1910 syn. nov. tribe Acontiini = Hypercalymniini FIBIGER & LAFONTAINE, 2005 syn. nov. Acontia (Acontia) versicolorata HACKER nom. nov. (pro olivescens HAMPSON, 1910, praeocc.) Acontia (Uracontia) viettei HACKER nom. nov. (pro magnifica VIETTE, 1958, praeocc.) Acontia (Acontia) metaxantha HAMPSON, 1910 comb. nov. Acontia (Acontia) ampijoroa (VIETTE, 1965) comb. nov. Acontia (Acontia) laurenconi (VIETTE, 1965) comb. nov. Acontia (Acontia) malagasy (VIETTE, 1965) comb. nov. Acontia (Acontia) gloriosa (KENRICK, 1917) comb. nov. Acontia (Acontia) transducta (VIETTE, 1958) comb. nov. Acontia (Acontia) splendida (ROTHSCHILD, 1924) comb. nov. Acontia (Acontia) accola (FELDER & ROGENHOFER, 1874) comb. nov. Acontia (Uracontia) magnifica (VIETTE, 1958) comb. nov. Acontia (Uracontia) melaphora (HAMPSON, 1910) comb. nov. 1) Corrigenda p. 214 Acontia (Emmelia) esperiana spec. nov., paratypes omitted: 2 xx, 2 ww, [Burkina Faso] "Obervolta, Bobo Dioulasso, 4.viii.1975, 9.viii.1975, 14.viii.1979, 22.viii.1981 (leg. POLITZAR)” (ZSM); 1 x, [Burkina Faso] "Obervolta, Folonzo am Fluss, Comoe, 7.ix.1985 (leg. -
Species Identification in Malaise Trap Samples by DNA Barcoding Based on NGS Technologies and a Scoring Matrix
RESEARCH ARTICLE Species Identification in Malaise Trap Samples by DNA Barcoding Based on NGS Technologies and a Scoring Matrix Jérôme Morinière1*, Bruno Cancian de Araujo1, Athena Wai Lam1, Axel Hausmann1,3, Michael Balke1,3, Stefan Schmidt1, Lars Hendrich1, Dieter Doczkal1, Berthold Fartmann2, Samuel Arvidsson2, Gerhard Haszprunar1,3 1 SNSB, Bavarian State Collection of Zoology, Münchhausenstrasse 21, 81247, München, Germany, 2 LGC Genomics GmbH, Ostendstraße 25, TGS Haus 8, 12459, Berlin, Germany, 3 GeoBio-Center der a11111 LMU München, München, Germany * [email protected] Abstract OPEN ACCESS The German Barcoding initiatives BFB and GBOL have generated a reference library of Citation: Morinière J, Cancian de Araujo B, Lam AW, more than 16,000 metazoan species, which is now ready for applications concerning next Hausmann A, Balke M, Schmidt S, et al. (2016) generation molecular biodiversity assessments. To streamline the barcoding process, we Species Identification in Malaise Trap Samples by have developed a meta-barcoding pipeline: We pre-sorted a single malaise trap sample DNA Barcoding Based on NGS Technologies and a Scoring Matrix. PLoS ONE 11(5): e0155497. (obtained during one week in August 2014, southern Germany) into 12 arthropod orders doi:10.1371/journal.pone.0155497 and extracted DNA from pooled individuals of each order separately, in order to facilitate Editor: Diego Fontaneto, Consiglio Nazionale delle DNA extraction and avoid time consuming single specimen selection. Aliquots of each ordi- Ricerche (CNR), ITALY nal-level DNA extract were combined to roughly simulate a DNA extract from a non-sorted Received: January 26, 2016 malaise sample. Each DNA extract was amplified using four primer sets targeting the CO1- 5’ fragment. -
First Record of the Sedge Feeder Bactra Verutana Zeller (Lepidoptera
Revista Brasileira de Entomologia 63 (2019) 104–107 REVISTA BRASILEIRA DE Entomologia A Journal on Insect Diversity and Evolution www.rbentomologia.com Short Communication First record of the sedge feeder Bactra verutana Zeller (Lepidoptera: Tortricidae) in Chile based on morphology and DNA barcodes a,∗ b Héctor A. Vargas , Marcelo Vargas-Ortiz a Universidad de Tarapacá, Facultad de Ciencias Agronómicas, Departamento de Recursos Ambientales, Arica, Chile b Universidad de Concepción, Facultad de Ciencias Naturales y Oceanográficas, Departamento de Zoología, Programa de Doctorado en Sistemática y Biodiversidad Concepción, Chile a r a b s t r a c t t i c l e i n f o Article history: The sedge-feeding moth Bactra verutana Zeller, 1875 (Lepidoptera: Tortricidae: Olethreutinae: Bactrini), Received 4 October 2018 described from Dallas, Texas, USA, is widespread, recorded throughout much North America, Central Accepted 27 February 2019 and South America, including the Caribbean, and Africa. The species is recorded for the first time from Available online 21 March 2019 Chile based on specimens collected in the coastal valleys of the Atacama Desert, where its larvae feed Associate Editor: Livia Pinheiro on Cyperus corymbosus Rottb. var. subnodosus (Nees & Meyen) Kük. (Cyperaceae). A single DNA barcode haplotype, which is widespread in USA, was found in two Chilean specimens sequenced. Keywords: © 2019 Sociedade Brasileira de Entomologia. Published by Elsevier Editora Ltda. This is an open Atacama Desert Cyperaceae access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). Cyperus corymbosus DNA barcoding Bactra Stephens, 1834 (Olethreutinae: Bactrini) is a widespread sequences (sensu Hebert et al., 2003) were used to assess the rela- genus of Tortricidae (Lepidoptera) with 106 described species tionships of the Chilean specimens. -
Lepidoptera: Tortricidae: Tortricinae) and Evolutionary Correlates of Novel Secondary Sexual Structures
Zootaxa 3729 (1): 001–062 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Monograph ZOOTAXA Copyright © 2013 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3729.1.1 http://zoobank.org/urn:lsid:zoobank.org:pub:CA0C1355-FF3E-4C67-8F48-544B2166AF2A ZOOTAXA 3729 Phylogeny of the tribe Archipini (Lepidoptera: Tortricidae: Tortricinae) and evolutionary correlates of novel secondary sexual structures JASON J. DOMBROSKIE1,2,3 & FELIX A. H. SPERLING2 1Cornell University, Comstock Hall, Department of Entomology, Ithaca, NY, USA, 14853-2601. E-mail: [email protected] 2Department of Biological Sciences, University of Alberta, Edmonton, Canada, T6G 2E9 3Corresponding author Magnolia Press Auckland, New Zealand Accepted by J. Brown: 2 Sept. 2013; published: 25 Oct. 2013 Licensed under a Creative Commons Attribution License http://creativecommons.org/licenses/by/3.0 JASON J. DOMBROSKIE & FELIX A. H. SPERLING Phylogeny of the tribe Archipini (Lepidoptera: Tortricidae: Tortricinae) and evolutionary correlates of novel secondary sexual structures (Zootaxa 3729) 62 pp.; 30 cm. 25 Oct. 2013 ISBN 978-1-77557-288-6 (paperback) ISBN 978-1-77557-289-3 (Online edition) FIRST PUBLISHED IN 2013 BY Magnolia Press P.O. Box 41-383 Auckland 1346 New Zealand e-mail: [email protected] http://www.mapress.com/zootaxa/ © 2013 Magnolia Press 2 · Zootaxa 3729 (1) © 2013 Magnolia Press DOMBROSKIE & SPERLING Table of contents Abstract . 3 Material and methods . 6 Results . 18 Discussion . 23 Conclusions . 33 Acknowledgements . 33 Literature cited . 34 APPENDIX 1. 38 APPENDIX 2. 44 Additional References for Appendices 1 & 2 . 49 APPENDIX 3. 51 APPENDIX 4. 52 APPENDIX 5.