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Microbial Biogeography and Ecology of the Mouth and Implications for Periodontal
bioRxiv preprint doi: https://doi.org/10.1101/541052; this version posted February 8, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. This article is a US Government work. It is not subject to copyright under 17 USC 105 and is also made available for use under a CC0 license. Microbial biogeography and ecology of the mouth and implications for periodontal diseases Authors: Diana M. Proctor1,2,10, Katie M. Shelef3,10, Antonio Gonzalez4, Clara L. Davis Long5, Les Dethlefsen1, Adam Burns1, Peter M. Loomer6, Gary C. Armitage7, Mark I. Ryder7, Meredith E. Millman7, Rob Knight4, Susan P. Holmes8, David A. Relman1,5,9 Affiliations 1Division of Infectious Disease & Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305 USA 2National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892 USA 3Department of Biology, Stanford University School of Medicine, Stanford, CA 94305 USA 4Departments of Pediatrics and Computer Science and Engineering, University of California at San Diego, La Jolla, CA 92093 USA 5Department of Microbiology & Immunology, Stanford University School of Medicine, Stanford, CA 94305 USA 6Ashman Department of Periodontology & Implant Dentistry, New York University College of Dentistry, New York, NY 10010 USA 7Division of Periodontology, University of California, San Francisco School of Dentistry, San Francisco, CA 94143 USA 8Department of Statistics, Stanford University, Stanford, CA 94305 USA 9Veterans Affairs Palo Alto Health Care System, Palo Alto, CA 94304 USA 10These authors contributed equally Corresponding author: David A. Relman: [email protected]; Address: Encina E209, 616 Serra Street, Stanford, California 94305-6165; Phone: 650-736-6822; Fax: 650-852-3291 1 bioRxiv preprint doi: https://doi.org/10.1101/541052; this version posted February 8, 2019. -
Advancing Banana and Plantain R & D in Asia and the Pacific
Advancing banana and plantain R & D in Asia and the Pacific Proceedings of the 9th INIBAP-ASPNET Regional Advisory Committee meeting held at South China Agricultural University, Guangzhou, China - 2-5 November 1999 A. B. Molina and V. N. Roa, editors The mission of the International Network for the Improvement of Banana and Plantain is to sustainably increase the productivity of banana and plantain grown on smallholdings for domestic consumption and for local and export markets. The Programme has four specific objectives: · To organize and coordinate a global research effort on banana and plantain, aimed at the development, evaluation and dissemination of improved banana cultivars and at the conservation and use of Musa diversity. · To promote and strengthen collaboration and partnerships in banana-related activities at the national, regional and global levels. · To strengthen the ability of NARS to conduct research and development activities on bananas and plantains. · To coordinate, facilitate and support the production, collection and exchange of information and documentation related to banana and plantain. Since May 1994, INIBAP is a programme of the International Plant Genetic Resources Institute (IPGRI). The International Plant Genetic Resources Institute (IPGRI) is an autonomous international scientific organization, supported by the Consultative Group on International Agricultural Research (CGIAR). IPGRIs mandate is to advocate the conservation and use of plant genetic resources for the benefit of present and future generations. IPGRIs headquarters is based in Rome, Italy, with offices in another 14 countries worldwide. It operates through three programmes: (1) the Plant Genetic Resources Programme, (2) the CGIAR Genetic Resources Support Programme, and (3) the International Network for the Improvement of Banana and Plantain (INIBAP). -
Amwands 1.Pdf
CHARACTERIZATION OF THE DYNAMIC INTERACTIONS OF TRANSCRIPTIONAL ACTIVATORS by Amberlyn M. Wands A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy (Chemistry) in The University of Michigan 2010 Doctoral Committee: Associate Professor Anna K. Mapp, Chair Professor Hashim M. Al-Hashimi Professor E Neil G. Marsh Associate Professor Jorge A. Iñiguez-Lluhí Amberlyn M. Wands All rights reserved 2010 Acknowledgements I have so many people to thank for helping me throughout my graduate school career. First, I would like to thank my advisor Dr. Anna Mapp for all of the guidance you have given me, as well as allowing me the freedom to express myself as a scientist. Your patience and confidence in my abilities means a lot to me, and I promise to keep working on presenting myself to others in a positive yet assertive manner. I would also like to thank you for taking the time to instill in your students the importance of thinking and writing critically about scientific concepts, which I know we will carry with us into our future careers. Next I would like to thank my committee members for their time, and for always asking me challenging questions that made me look at my projects from a different perspective. I would also like to give a special thanks to Dr. Carol Fierke and Dr. John Hsieh for their willingness to work on a collaboration with people starting with a minimal background in the field of transient kinetics. Their love of solving kinetic problems is inspiring, and I appreciate being given the opportunity to work with them. -
Dynamic Evaluation of Forces During Mastication
Project Number: ME-SYS-0787 Dynamic Evaluation of Forces During Mastication A Major Qualifying Project Submitted to the Faculty of WORCESTER POLYTECHNIC INSTITUTE In partial fulfillment of requirements for the Degree of Bachelor of Science By Justin McGarry Anthony Spangenberger Date: Approval: Professor Satya Shivkumar, Advisor Abstract A reproduction of the human masticatory system is presented here to evaluate mechanical properties of foods, relevant design elements of the simulator, and the overall practicality of the system. The model incorporates a cam-driven linkage system providing realistic motion of the mandible, with reaction forces measured by strain gages on two axes to record real time changes in food structure. The experiment demonstrates that the construction of a mastication simulator is feasible and allows texture profiling and discrimination between similar foods. i Acknowledgements Our MQP was completed with the help of several individuals who offered professional advice and technical guidance. We would like to thank Prof. Satya Shivkumar, our project advisor, for guiding us with his extensive knowledge of materials and testing procedures, Prof. John Hall for his help with the sensors used in this project and his willingness to lend some of the necessary equipment, Prof. Robert Norton for his advice on the fixture design, Fred Hutson for lending equipment from the physics department for use in calibration of the fixture, Randy Robinson for the computer used for recording data, Neil Whitehouse, Toby Bergstrom, and Adam -
Australia Lacks Stem Succulents but Is It Depauperate in Plants With
Available online at www.sciencedirect.com ScienceDirect Australia lacks stem succulents but is it depauperate in plants with crassulacean acid metabolism (CAM)? 1,2 3 3 Joseph AM Holtum , Lillian P Hancock , Erika J Edwards , 4 5 6 Michael D Crisp , Darren M Crayn , Rowan Sage and 2 Klaus Winter In the flora of Australia, the driest vegetated continent, [1,2,3]. Crassulacean acid metabolism (CAM), a water- crassulacean acid metabolism (CAM), the most water-use use efficient form of photosynthesis typically associated efficient form of photosynthesis, is documented in only 0.6% of with leaf and stem succulence, also appears poorly repre- native species. Most are epiphytes and only seven terrestrial. sented in Australia. If 6% of vascular plants worldwide However, much of Australia is unsurveyed, and carbon isotope exhibit CAM [4], Australia should host 1300 CAM signature, commonly used to assess photosynthetic pathway species [5]. At present CAM has been documented in diversity, does not distinguish between plants with low-levels of only 120 named species (Table 1). Most are epiphytes, a CAM and C3 plants. We provide the first census of CAM for the mere seven are terrestrial. Australian flora and suggest that the real frequency of CAM in the flora is double that currently known, with the number of Ellenberg [2] suggested that rainfall in arid Australia is too terrestrial CAM species probably 10-fold greater. Still unpredictable to support the massive water-storing suc- unresolved is the question why the large stem-succulent life — culent life-form found amongst cacti, agaves and form is absent from the native Australian flora even though euphorbs. -
UCDH Dental Hygiene Glossary Editorial Compilation/Consultant Special Thanks
UCDH Dental Hygiene Glossary A Faculty/Student Venture Editorial Compilation/Consultant Brent Molen RDH, Med College President/Chief Operations Officer Assistant Professor, The Utah College of Dental Hygiene at Careers Unlimited Special Thanks A special thanks goes out to all the dental hygiene students of the classes of 2009, 2010, and 2011 who have helped make this venture possible and who have contributed their efforts to it. The information contained in this glossary is to be used by the dental hygiene professional only and for dental education purposes only. It is not intended for the general public. Any sale, distribution, copying, dissemination, or duplication of this glossary without written permission is strictly prohibited. If you have received this glossary electronically in error, please call (801) 426-8234 (USA) or notify by return email [email protected] immediately & delete or destroy the digital file. Copyright 2010 Careers Unlimited L.L.C. UCDH is a division of Careers Unlimited L.L.C. Abducens Nerve: the sixth cranial nerve, which controls movement of one single muscle, the lateral rectus muscle, of the eye. Abrasive: to scratch a surface or have rough texture being able to remove a layer. Abscess: the destruction of tissue due to activity of bacteria producing pus, pain and swelling as result of microscopic cellular activity. Abuse: to do harm or wrong doing to others or yourself; by physical or chemical means. Abutment: a tooth, root or implant that serves as the support or anchor to a denture or a fixed or removable bridge. See pontics. Abutment: a tooth, root, or implant that supports and maintains position of a fixed or removable prosthesis. -
Serine Proteases with Altered Sensitivity to Activity-Modulating
(19) & (11) EP 2 045 321 A2 (12) EUROPEAN PATENT APPLICATION (43) Date of publication: (51) Int Cl.: 08.04.2009 Bulletin 2009/15 C12N 9/00 (2006.01) C12N 15/00 (2006.01) C12Q 1/37 (2006.01) (21) Application number: 09150549.5 (22) Date of filing: 26.05.2006 (84) Designated Contracting States: • Haupts, Ulrich AT BE BG CH CY CZ DE DK EE ES FI FR GB GR 51519 Odenthal (DE) HU IE IS IT LI LT LU LV MC NL PL PT RO SE SI • Coco, Wayne SK TR 50737 Köln (DE) •Tebbe, Jan (30) Priority: 27.05.2005 EP 05104543 50733 Köln (DE) • Votsmeier, Christian (62) Document number(s) of the earlier application(s) in 50259 Pulheim (DE) accordance with Art. 76 EPC: • Scheidig, Andreas 06763303.2 / 1 883 696 50823 Köln (DE) (71) Applicant: Direvo Biotech AG (74) Representative: von Kreisler Selting Werner 50829 Köln (DE) Patentanwälte P.O. Box 10 22 41 (72) Inventors: 50462 Köln (DE) • Koltermann, André 82057 Icking (DE) Remarks: • Kettling, Ulrich This application was filed on 14-01-2009 as a 81477 München (DE) divisional application to the application mentioned under INID code 62. (54) Serine proteases with altered sensitivity to activity-modulating substances (57) The present invention provides variants of ser- screening of the library in the presence of one or several ine proteases of the S1 class with altered sensitivity to activity-modulating substances, selection of variants with one or more activity-modulating substances. A method altered sensitivity to one or several activity-modulating for the generation of such proteases is disclosed, com- substances and isolation of those polynucleotide se- prising the provision of a protease library encoding poly- quences that encode for the selected variants. -
Spatial and Temporal Dynamics of the Endothelium
Journal of Thrombosis and Haemostasis, 3: 1392–1406 REVIEW ARTICLE Spatial and temporal dynamics of the endothelium W. C. AIRD Division of Molecular and Vascular Medicine, Department of Medicine, and Center for Vascular Biology Research, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA To cite this article: Aird WC. Spatial and temporal dynamics of the endothelium. J Thromb Haemost 2005; 3: 1392–1406. particular emphasis on: (i) the mechanisms of phenotypic Summary. The endothelium is a highly metabolically active heterogeneity; (ii) the bench-to-bedside gap in endothelial organ that is involved in many physiological processes, biomedicine; (iii) endothelial cell activation and dysfunction; including the control of vasomotor tone, barrier function, and (iv) the need for new diagnostic and therapeutic approa- leukocyte adhesion and trafficking, inflammation, and hemos- ches in endothelial-based diseases. tasis. Endothelial cell phenotypes are differentially regulated in space and time. Endothelial cell heterogeneity has important implications for developing strategies in basic research, diag- Scales of investigation nostics and therapeutics. The goals of this review are to: The term ÔvascularÕ refers to blood vessels, the elaborate (i) consider mechanisms of endothelial cell heterogeneity; series of blood-filled hollow tubes that deliver oxygen and (ii) discuss the bench-to-bedside gap in endothelial biomedicine; nutrients to all tissues of the human body. The vascular (iii) revisit definitions for endothelial cell activation and system comprises both blood vessels and lymphatic vessels. dysfunction; and (iv) propose new goals in diagnosis and For purposes of this review, we will focus on the former. For therapy. Finally, these themes will be applied to an under- more information about lymphangiogenesis and lymphatic standing of vascular bed-specific hemostasis. -
Angiocrine Endothelium: from Physiology to Cancer Jennifer Pasquier1,2*, Pegah Ghiabi2, Lotf Chouchane3,4,5, Kais Razzouk1, Shahin Rafi3 and Arash Rafi1,2,3
Pasquier et al. J Transl Med (2020) 18:52 https://doi.org/10.1186/s12967-020-02244-9 Journal of Translational Medicine REVIEW Open Access Angiocrine endothelium: from physiology to cancer Jennifer Pasquier1,2*, Pegah Ghiabi2, Lotf Chouchane3,4,5, Kais Razzouk1, Shahin Rafi3 and Arash Rafi1,2,3 Abstract The concept of cancer as a cell-autonomous disease has been challenged by the wealth of knowledge gathered in the past decades on the importance of tumor microenvironment (TM) in cancer progression and metastasis. The sig- nifcance of endothelial cells (ECs) in this scenario was initially attributed to their role in vasculogenesis and angiogen- esis that is critical for tumor initiation and growth. Nevertheless, the identifcation of endothelial-derived angiocrine factors illustrated an alternative non-angiogenic function of ECs contributing to both physiological and pathological tissue development. Gene expression profling studies have demonstrated distinctive expression patterns in tumor- associated endothelial cells that imply a bilateral crosstalk between tumor and its endothelium. Recently, some of the molecular determinants of this reciprocal interaction have been identifed which are considered as potential targets for developing novel anti-angiocrine therapeutic strategies. Keywords: Angiocrine, Endothelium, Cancer, Cancer microenvironment, Angiogenesis Introduction of blood vessels in initiation of tumor growth and stated Metastatic disease accounts for about 90% of patient that in the absence of such angiogenesis, tumors can- mortality. Te difculty in controlling and eradicating not expand their mass or display a metastatic phenotype metastasis might be related to the heterotypic interaction [7]. Based on this theory, many investigators assumed of tumor and its microenvironment [1]. -
Jones Cross 2006 Index
AN INDEX AND ORCHID SPECIES CROSS REFERENCE TO JONES, D.L. (2006) A Complete Guide to Native Orchids of Australia including the Island Territories Compiled by David Gillingham - A.N.O.S. (Qld) Kabi Group Inc. Contents: Page 1: Contents Explanations/Introduction References General Comments Page 2: The Jones "Dendrobium Alliance" - Comments, Notes, Cross Index Page 3: The Jones "Bulbophyllum Alliance" - Cross Index Page 4: The Jones "Vanda Alliance" - Notes, Cross Index Page 5: The Jones "Miscellaneous Epiphytes" - Notes, Cross Index Page 6: The Dendrobium speciosum/Thelychiton speciosus Complex Explanations/Introduction: There can be little doubt that David Jones's (2006) book A Complete Guide to Native Orchids of Australia including the Island Territories provides probably the most current and most comprehensive coverage of Australia's native orchids available between one set of covers. However whether, and to what extent, the very substantial taxonomic restructure presented in the book is accepted by the professional botanical community, only time will tell. In the meantime, while many orchid growers will enthusiastically embrace these new taxonomies, many others will exercise their valid right to continue labelling their orchids using the older taxa, waiting for the dust to settle on the scientific debate. In either regard there are difficulties for users of Jones's book, in their attempt to relate many of these new taxa to older species descriptors. The individual species entries in the text provide no prior taxonomic information whatever; and the index is of limited assistance, and far from complete regarding taxonomic descriptors commonly used over the past decade or so. -
BANANAS in Compost Is Moisture and to Keep Excellent for the Bananas Heavily CENTRAL Improving the Mulched
Manure or plants good soil and BANANAS IN compost is moisture and to keep excellent for the bananas heavily CENTRAL improving the mulched. soil. They also Bananas are hardy FLORIDA prefer a moist plants in Central soil. Bananas are Florida but tempera- ananas are a commonly grown not very drought tures below 34˚F will plant in Central Florida. They are tolerant and need damage the foliage. usually grown for the edible fruit supplemental Following a freeze, B watering during bananas can look and tropical look, but some are grown for their colorful inflorescences or dry periods. They pathetic with the ornamental foliage. Bananas are members are also heavy brown, lifeless foliage of the Musaceae Family. This family feeders and hanging from the includes plants found in the genera should be fed stem, but don’t let this Ensete, Musa, and Musella. Members of several times a fool or discourage you. year for optimum Once the weather this family are native mainly to south- Musa mannii eastern Asia, but some are also found growth. A good warms, new growth wild in tropical Africa and northeastern balanced fertilizer, such as 6-6-6 or quickly begins and green leaves arise. Australia. They are cultivated throughout 10-10-10 with micronutrients is best. After a couple of months, the plants are the tropics and subtropics and are an Also an application of extra potassium lush and healthy. The stems will not be important staple in many diets. Bananas (potash) is beneficial to the plants. Most damaged unless temperatures drop are not true trees but rather are large, bananas are susceptible to nematodes, so below 24˚F. -
A Legacy of Plants N His Short Life, Douglas Created a Tremendous Legacy in the Plants That He Intro (P Coulteri) Pines
The American lIorHcullural Sociely inviles you Io Celehrate tbe American Gardener al our 1999 Annual Conference Roston" Massachusetts June 9 - June 12~ 1999 Celebrate Ute accompHsbenls of American gardeners in Ute hlsloric "Cay Upon lhe 1Iill." Join wah avid gardeners from. across Ute counlrg lo learn new ideas for gardening excellence. Attend informa-Hve ledures and demonslraHons by naHonally-known garden experts. Tour lhe greal public and privale gardens in and around Roslon, including Ute Arnold Arborelum and Garden in Ute Woods. Meet lhe winners of AIlS's 1999 naHonJ awards for excellence in horHcullure. @ tor more informaHon, call1he conference regislrar al (800) 777-7931 ext 10. co n t e n t s Volume 78, Number 1 • '.I " Commentary 4 Hellebores 22 Members' Forum 5 by C. Colston Burrell Staghorn fern) ethical plant collecting) orchids. These early-blooming pennnials are riding the crest of a wave ofpopularity) and hybridizers are News from AHS 7 busy working to meet the demand. Oklahoma Horticultural Society) Richard Lighty) Robert E. Lyons) Grecian foxglove. David Douglas 30 by Susan Davis Price Focus 9 Many familiar plants in cultivation today New plants for 1999. are improved selections of North American species Offshoots 14 found by this 19th-century Scottish expLorer. Waiting for spring in Vermont. Bold Plants 37 Gardeners Information Service 15 by Pam Baggett Houseplants) transplanting a ginkgo tree) Incorporating a few plants with height) imposing starting trees from seed) propagating grape vines. foliage) or striking blossoms can make a dramatic difference in any landscape design. Mail-Order Explorer 16 Heirloom flowers and vegetables.