Authorization to Lend and Reproduce the Thesis

Total Page:16

File Type:pdf, Size:1020Kb

Authorization to Lend and Reproduce the Thesis AUTHORIZATION TO LEND AND REPRODUCE THE THESIS As the sole author of this thesis, I authorize Brown University to lend it to other institutions or individuals for the purpose of scholarly research. Date _______________03/22/2017 _____________________ Jinjie Liu, Author I future authorize Brown University to reproduce this thesis by photocopying or other means, in total or in part, at the request of other institutions or individuals for the purpose of scholarly research. Date _______________03/22/2017 _____________________ Jinjie Liu, Author Review of Sex Hormone-Binding Globlin, dietary factors and health Relation of Dietary Carbohydrates Intake to Circulating Sex Hormone-Binding Globulin Levels in Postmenopausal Women By Jinjie Liu B.S. Beijing Sport University Thesis Submitted in partial fulfillment of the requirements for the Degree of Master of Public Health in Brown University School of Public Health PROVIDENCE, RHODE ISLAND MAY, 2017 ii This thesis by Jinjie Liu is accepted in its present form by the Brown University School of Public Health as satisfying the thesis requirements for the degree of Master of Public Health Date:________________ ___________________________ Simin Liu, M.D., Ph.D., Advisor Date:________________ ___________________________ Xi Luo, Ph.D., Reader Date:________________ ___________________________ Patrick M. Vivier, M.D.,Ph.D. Director, Master of Public Health Program Approved by the Graduate Council Date:______________ _____________________________ Andrew G. Campbell , Dean of the Graduate School iii Vita Jinjie Liu was born on July 5th, 1993 in Lanzhou, China to Chun Liu and Sudi Zhang. During her study in Beijing Sport University in Beijing, China, she earned national scholarship, studied abroad in Indiana University Bloomington in Bloomington, Indiana for a year in school of Public Health. During that time, she was the team leader in Applied Physical Education lab taking care of children with special needs and was inducted into Honors Society. Growing passion in public health, she attended Brown University as a master of public health candidate after receiving her Bachelor of Science degree in Beijing Sport University in 2015. While pursing her master degree in Brown with a focus in biostatistics, she did intensive training on quantitative research and analysis, which helped her gain a better understanding on the public health issues holding the knowledge and tools she got. Jinjie did her summer internship at Global Biostatistics Department of Merck Serono in Beijing, assisting with clinical research on new drug development. Most recently, she has been helping with a research project in the Center for Alcohol and Addition Studies in Brown University as research assistant. In the meanwhile, she has been interning in SCIO Health Analytics in Hartford, Connecticut as a health care analyst, dealing with health insurance claim data and working with patients and health insurance companys. iv Preface and Acknowledgments I must first thank my thesis advisor Dr. Simin Liu, for being such a patient and supportive mentor who guided me through not only the work of my thesis, but also issues that I encountered with while pursuing my master degree at Brown. I was lucky enough to work with Mengna Huang, who gave me countless of useful information regarding my thesis as well as working together and finally got it published. She was an excellent example of being an outstanding student and a writer doing public health research. I also want to thank Xiaochen Lin, who also assisted me throughout the whole process, as a supervisor as well as a friend. Meanwhile, I want to thank my thesis reader Luo Xi, who has unbeatable computation skill and passion in big data research. I am grateful for all the help from Joann Barao, Dr. Vivier and Diane Schlacter while studying at Brown, without whom I might never made it for lots of opportunities. At the same time, I appreciate the opportunity Dr, Carey offered my as research assistant for the project that’s just within my interests. I also own a huge thank to my manager who offered me my current job, Emily Li. She is always in my concern and pushing me to grow and be better. To my family, my incredible parents, my grandma, who passed away while I was abroad with no chance to fly back to see her, and to my grandpa. v Table of Content PART 1: LITERATURE REVIEW – SEX HORMONE-BINDING GLOBLIN, DIETARY FACTORS AND HEALTH .......................................................................................................................................................... 1 SHBG AND SEXUAL HORMONES ................................................................................................................................... 1 Sex hormones and health ................................................................................................................................................ 2 SHBG and health .................................................................................................................................................................. 2 SHBG and women’s health ............................................................................................................................................. 4 SHBG AND LEADING FACTORS ..................................................................................................................................... 4 SHBG and lifestyle factors ............................................................................................................................................... 5 SHBG and weight related factors ................................................................................................................................ 5 SHBG AND DIETARY FACTORS ...................................................................................................................................... 6 SHBG and restricted diet .................................................................................................................................................. 7 SHBG and fiber intake ....................................................................................................................................................... 7 SHBG and fat intake ............................................................................................................................................................ 8 SHBG and meat consumption ....................................................................................................................................... 8 SHBG and protein intake .................................................................................................................................................. 9 SHBG and sugar intake ..................................................................................................................................................... 9 SHBG and carbohydrates intake .............................................................................................................................. 10 PART 2: RESEARCH PAPER – RELATION OF DIETARY CARBOHYDRATES INTAKE TO CIRCULATING SEX HORMONE-BINDING GLOBULIN LEVELS IN POSTMENOPAUSAL WOMEN .................................................................................................................................................................. 11 ABSTRACT ........................................................................................................................................................................... 11 INTRODUCTION ................................................................................................................................................................... 13 METHODS ............................................................................................................................................................................. 14 Study Subjects ..................................................................................................................................................................... 14 Measurement of Serum SHBG Concentrations .............................................................................................. 16 Dietary Measurements .................................................................................................................................................... 16 Statistical Analysis ............................................................................................................................................................. 17 RESULTS ............................................................................................................................................................................... 19 DISCUSSION ........................................................................................................................................................................ 22 ACKNOWLEDGMENTS ...................................................................................................................................................... 28 REFERENCES ...................................................................................................................................................................... 30 TABLES .................................................................................................................................................................................. 37 Table 1. Baseline
Recommended publications
  • Chu Chen, MS, Phd, NRCC, DABCC Full Member Fred Hutchinson Cancer Research Center 1100 Fairview Avenue North, Mail Stop M5-C800 P.O
    CHU CHEN, MS, PhD, NRCC, DABCC PERSONAL DATA Address: Chu Chen, MS, PhD, NRCC, DABCC Full Member Fred Hutchinson Cancer Research Center 1100 Fairview Avenue North, Mail Stop M5-C800 P.O. Box 19024 Seattle, Washington 98109-1024 Tel: (206) 667–6644 Fax: (206) 667–2537 E–mail: [email protected] Citizenship: USA Gender: Female EDUCATION 2003 Fifth Annual Seattle Epidemiology & Biostatistics Summer Section at University of Washington, sponsored by Seattle Epidemiologic Research and Information Center, Department of Veterans Affairs, and Department of Epidemiology and Department of Biostatistics, University of Washington. 2000 New England Epidemiology Institute Summer Course, Tufts University. 1990-1992 Senior Fellow, Division of Clinical Chemistry, Department of Laboratory Medicine, University of Washington, Seattle, Washington. Second Year Specialty Training: Clinical Toxicology. 1987-1990 Postdoctoral Research Associate, Laboratory of Maxine Linial, Ph.D., Member, Program in Molecular Virology, Division of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington. 1983-1986 Individual National Research Service Award Postdoctoral Fellow, Laboratory of Sen–itiroh Hakomori, M.D., Ph.D., Member, Program in Biochemical Oncology, Division of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington and Professor, Department of Pathobiology, University of Washington. 1982 Ph.D. in Biochemistry, University of Washington, Seattle, Washington. Dissertation: "Structure and Reactivity of the Small Spherical High Density Lipoproteins in Familial Lecithin: Cholesterol Acyltransferase Deficiency as Compared with the Structure and Reactivity of Artificially Formed Lipoproteins." Dissertation Advisor: John A. Glomset, M.D., PhD., Professor, Department of Biochemistry and Investigator, Howard Hughes Medical Institute, University of Washington. 1971 M.S. in Botany, Specialization: Medical Mycology, Ohio State University, Columbus, Ohio.
    [Show full text]
  • The Women's Health Initiative: History
    DONNA J. BROGAN LECTURE IN BIOSTATISTICS “The Women’s Health Initiative: History, Contributions and Ongoing Research” Presented by: Donna J. Brogan, Ph.D. Emerita Professor Department of Biostatistics and Bioinformatics Rollins School of Public Health Donna J. Brogan received her Ph.D. in statistics from Iowa State University and was Assistant Professor of Biostatistics at UNC School of Public Health before joining Emory in 1971 as the first female faculty member in its Statistics/Biometry Department, later becoming only the fourth female full professor in its School of Medicine. In the Rollins School of Public Health, she was its first female full professor and its first female chair of the Department of Ross L. Prentice, Ph.D. Biostatistics. Dr. Brogan’s research interests, reflected in her 150 publications, Fred Hutchinson Cancer Research Center and include design and analysis of complex sample surveys and collaboration with University of Washington health scientists. Dr. Brogan’s honors include fellow of the American Statistical Association The Women’s Health Initiative was launched in 1992 following some years of developmental work. It enrolled 161,808 healthy postmenopausal women at (ASA), Emory University’s Thomas Jefferson Award, three distinguished alumni awards [Gettysburg College (BA), Purdue (MS), Iowa State (Ph.D.)], 40 U.S. clinical centers. A randomized, controlled trial among 68,132 such and the ASA’s Elizabeth Scott Award for significant contributions to the women examined the health effects of postmenopausal hormone therapy, a advancement of women within the statistics discipline. Dr. Brogan’s leadership low-fat dietary pattern, and calcium and vitamin D supplementation, in a partial talent in academic and government realms was applied to selected activism.
    [Show full text]
  • Statistical Issues Arising in the Women's Health Initiative
    Biometrics 61, 899–941 DOI: 10.1111/j.1541-0420.2005.00454.x December 2005 Statistical Issues Arising in the Women’s Health Initiative Ross L. Prentice,∗ Mary Pettinger,∗∗ and Garnet L. Anderson∗∗∗ Division of Public Health Sciences, Fred Hutchinson Cancer Research Center, P.O. Box 19024, Seattle, Washington 98109-1024, U.S.A. ∗email: [email protected] ∗∗email: [email protected] ∗∗∗email: [email protected] Summary. A brief overview of the design of the Women’s Health Initiative (WHI) clinical trial and observational study is provided along with a summary of results from the postmenopausal hormone therapy clinical trial components. Since its inception in 1992, the WHI has encountered a number of statistical issues where further methodology developments are needed. These include measurement error modeling and analysis procedures for dietary and physical activity assessment; clinical trial monitoring methods when treatments may affect multiple clinical outcomes, either beneficially or adversely; study design and analysis procedures for high-dimensional genomic and proteomic data; and failure time data analysis procedures when treatment group hazard ratios are time dependent. This final topic seems important in resolving the discrepancy between WHI clinical trial and observational study results on postmenopausal hormone therapy and cardiovascular disease. Key words: Chronic disease prevention; Clinical trial monitoring; Genome-wide scan; Hazard ratio; Measurement error; Nutritional epidemiology; Observational study; Randomized controlled trial; Women’s health. 1. Introduction domly assigned 48,835 eligible women to either a sustained The Women’s Health Initiative (WHI) is perhaps the most low-fat eating pattern (40%) or self-selected dietary behavior ambitious population research investigation ever undertaken.
    [Show full text]
  • Supporting Statement a Attachment 2 Data Collection
    Supporting Statement A Attachment 2 Data Collection Background Analysis Bibliography Status Manuscript No. Title Convener Full Citation Keywords Abstract Study Component Publication 1 Informed consent in the Women's Health Initiative Anne McTiernan McTiernan A, Rossouw J, Manson J, Franzi C, Taylor V, none provided Both OS and CT Clinical Trial and Observational Study Carleton R, Johnson S, Nevitt M. Informed consent in the Women's Health Initiative Clinical Trial and Observational Study. J Womens Health. 1995;4:519-29. Publication 4 The Women's Health Initiative: Overview of the Lesley Tinker Tinker LF, Burrows ER, Henry H, Patterson R, Rupp J, none provided Both OS and CT nutrition components Van Horn L. The Women's Health Initiative: Overview of the nutrition components. In: Krummel DA, Kris-Etherton PM, eds. Nutrition and women's health. Gaithersburg, MD: Aspen Publishers,1996:510-42. Publication 5 Women's Health Initiative: Why now? What is it? Karen Matthews Matthews KA, Shumaker SA, Bowen DJ, Langer RD, Hunt none provided http://www.ncbi.nlm.nih.go Both OS and CT What's new? JR, Kaplan RM, Klesges RC, Ritenbaugh C. Women's v/pubmed/9104085?dopt= Health Initiative. Why now? What is it? What's new? Am AbstractPlus Psychol. 1997 Feb;52(2):101-16. Publication 6 Low-fat diet practices of older women: Prevalence Ruth Patterson Patterson RE, Kristal AR, Coates RJ, Tylavsky FA, none provided http://www.ncbi.nlm.nih.go Both OS and CT and implications for dietary assessment Ritenbaugh C, Van Horn L, Caggiula AW, Snetselaar L. v/pubmed/8675910?dopt= Low-fat diet practices of older women: Prevalence and AbstractPlus implications for dietary assessment.
    [Show full text]
  • Curriculum Vitae
    Curriculum Vitae YING QING CHEN, PH.D. Contact Information Fred Hutchinson Cancer Research Center 1100 Fairview Ave N, M2-C200 Seattle, WA 98109-1024 Phone: (206) 667-7051 Fax: (206) 667-4837 E-mail: [email protected] Education 1992 B.S. in Computational Mathematics, Peking University, Beijing, China 1999 Ph.D. in Biostatistics, Johns Hopkins University, Baltimore, MD Primary Position 1999 - 2004 Sweesy-Womack Assistant Professor, Division of Biostatistics, School of Public Health, University of California, Berkeley, CA (on leave 2003 - 2004) 2003 - 2004 Associate Professor, Division of Biostatistics, Department of Statistics, University of Florida, Gainesville, FL 2004 - 2011 Associate Member, Public Health Sciences Division (PHS) and Vaccine and Infectious Disease Division (VIDD), Fred Hutchinson Cancer Research Center, Seattle, WA 2011 - Present Full Member, PHS Division and VIDD, Fred Hutchinson Cancer Research Center, Seattle, WA Teaching Experience 1994 - 1999 Teaching Assistant, Department of Biostatistics, Johns Hopkins University, Baltimore, MD 1999 - 2000 Adjunct Assistant Professor, Department of Biostatistics, Johns Hopkins University, Baltimore, MD 1999 - 2004 Assistant Professor, Graduate Program in Biostatistics, University of California, Berkeley, CA 2003 - 2004 Associate Professor, Division of Biostatistics, Department of Statistics, University of Florida, Gainesville, FL 2004 - 2012 Affiliate Associate Professor, Department of Biostatistics, University of Washington, Seattle, WA 2012 - Present Affiliate Professor,
    [Show full text]
  • Chu Chen, MS, Phd, NRCC, DABCC Full Professor Fred Hutchinson Cancer Research Center 1100 Fairview Avenue North, Mail Stop M5-C800 P.O
    CHU CHEN, MS, PhD, NRCC, DABCC PERSONAL DATA Address: Chu Chen, MS, PhD, NRCC, DABCC Full Professor Fred Hutchinson Cancer Research Center 1100 Fairview Avenue North, Mail Stop M5-C800 P.O. Box 19024 Seattle, Washington 98109-1024 Tel: (206) 667–6644 Fax: (206) 667–2537 E–mail: [email protected] Ctizenship: USA Gender: Female EDUCATION 2003 Fifth Annual Seattle Epidemiology & Biostatistics Summer Section at University of Washington, sponsored by Seattle Epidemiologic Research and Information Center, Department of Veterans Affairs, and Department of Epidemiology and Department of Biostatistics, University of Washington. 2000 New England Epidemiology Institute Summer Course, Tufts University. 1990-1992 Senior Fellow, Division of Clinical Chemistry, Department of Laboratory Medicine, University of Washington, Seattle, Washington. Second Year Specialty Training: Clinical Toxicology. 1987-1990 Postdoctoral Research Associate, Laboratory of Maxine Linial, Ph.D., Professor, Program in Viral Oncology, Division of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington. 1983-1986 Individual National Research Service Award Postdoctoral Fellow, Laboratory of Sen–itiroh Hakomori, M.D., Ph.D., Professor, Program in Biochemical Oncology, Division of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington and Professor, Department of Pathobiology, University of Washington. 1982 Ph.D. in Biochemistry, University of Washington, Seattle, Washington. Dissertation: "Structure and Reactivity of the Small Spherical High Density Lipoproteins in Familial Lecithin: Cholesterol Acyltransferase Deficiency as Compared with the Structure and Reactivity of Artificially Formed Lipoproteins." Dissertation Advisor: John A. Glomset, M.D., PhD., Professor, Department of Biochemistry and Investigator, Howard Hughes Medical Institute, University of Washington. 1971 M.S. in Botany, Specialization: Medical Mycology, Ohio State University, Columbus, Ohio.
    [Show full text]
  • C⃝copyright 2012 Shanshan Zhao
    ⃝c Copyright 2012 Shanshan Zhao Covariate Measurement Error Correction Methods in Mediation Analysis with Failure Time Data Shanshan Zhao A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy University of Washington 2012 Reading Committee: Ross L. Prentice, Chair Ying Qing Chen Susanne May Program Authorized to Offer Degree: Biostatistics University of Washington Abstract Covariate Measurement Error Correction Methods in Mediation Analysis with Failure Time Data Shanshan Zhao Chair of the Supervisory Committee: Professor Ross L. Prentice Department of Biostatistics Mediation analysis is important in understanding the mechanisms of one variable causing changes in another. Measurement error could be obscuring the ability of the potential mediator to explain this mechanism. Existing correction methods in mediation analysis literature are not directly applicable to failure time data. This dissertation focuses on developing correction methods for measurement error in the potential mediator with time-to-event outcome. We consider two specifications of mea- surement errors: one with technical measurement error only, and one with both technical measurement error and temporal variation. The underlying model with the true media- tor values is assumed to be the Cox proportional hazards model. The hazard function induced by the observed mediator value no longer corresponds to a simple partial likelihood independent of the baseline hazard function, due to the conditioning event fTe ≥ tg. We propose a mean-variance regression calibration and a follow-up time calibration approach to approximate the induced partial likelihood. Both methods demonstrate successes in recov- ering treatment effect estimates with both types of measurement error in simulation studies.
    [Show full text]
  • Genome-Wide Interaction Analysis of Menopausal Hormone Therapy Use and Breast Cancer Risk Among 62,370 Women
    Genome-wide Interaction Analysis of Menopausal Hormone Therapy Use and Breast Cancer Risk among 62,370 Women Xiaoliang Wang ( [email protected] ) University of Washington Pooja Kapoor German Cancer Research Center Paul Auer University of Wisconsin–Milwaukee Joe Dennis University of Cambridge Alison Dunning University of Cambridge Qin Wang University of Cambridge Michael Lush University of Cambridge Kyriaki Michailidou Cyprus Institute of Neurology and Genetics Manjeet Bolla University of Cambridge Kristan Aronson Queen's University Rachel Murphy University of British Columbia Angela Brooks-Wilson BC Cancer Agency Derrick Lee St. Francis Xavier University Emilie Cordina-Duverger INSERM University Paris-Saclay Pascal Guénel INSERM University Paris-Saclay Thérèse Truong INSERM University Paris-Saclay Claire Mulot INSERM UMR-S1147 University Paris Sorbonne Lauren Teras American Cancer Society Alpa Patel American Cancer Society Page 1/22 Laure Dossus International Agency For Research On Cancer Rudolf Kaaks German Cancer Research Center Reiner Hoppe Dr. Margarete Fischer-Bosch-Institute of Clinical Pharmacology Wing-Yee Lo Dr. Margarete Fischer-Bosch-Institute of Clinical Pharmacology Thomas Brüning Ruhr University Bochum Ute Hamann German Cancer Research Center Kamila Czene Karolinska Institute Marike Gabrielson Karolinska Institute Per Hall Karolinska Institute Mikael Eriksson Karolinska Institute Audrey Jung German Cancer Research Center Heiko Becher University Medical Center Hamburg-Eppendorf Fergus Couch Mayo Clinic Nicole Larson Mayo
    [Show full text]