Lab 2: Aseptic Technique and Transfer of Microorganisms
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Fungal Infections from Human and Animal Contact
Journal of Patient-Centered Research and Reviews Volume 4 Issue 2 Article 4 4-25-2017 Fungal Infections From Human and Animal Contact Dennis J. Baumgardner Follow this and additional works at: https://aurora.org/jpcrr Part of the Bacterial Infections and Mycoses Commons, Infectious Disease Commons, and the Skin and Connective Tissue Diseases Commons Recommended Citation Baumgardner DJ. Fungal infections from human and animal contact. J Patient Cent Res Rev. 2017;4:78-89. doi: 10.17294/2330-0698.1418 Published quarterly by Midwest-based health system Advocate Aurora Health and indexed in PubMed Central, the Journal of Patient-Centered Research and Reviews (JPCRR) is an open access, peer-reviewed medical journal focused on disseminating scholarly works devoted to improving patient-centered care practices, health outcomes, and the patient experience. REVIEW Fungal Infections From Human and Animal Contact Dennis J. Baumgardner, MD Aurora University of Wisconsin Medical Group, Aurora Health Care, Milwaukee, WI; Department of Family Medicine and Community Health, University of Wisconsin School of Medicine and Public Health, Madison, WI; Center for Urban Population Health, Milwaukee, WI Abstract Fungal infections in humans resulting from human or animal contact are relatively uncommon, but they include a significant proportion of dermatophyte infections. Some of the most commonly encountered diseases of the integument are dermatomycoses. Human or animal contact may be the source of all types of tinea infections, occasional candidal infections, and some other types of superficial or deep fungal infections. This narrative review focuses on the epidemiology, clinical features, diagnosis and treatment of anthropophilic dermatophyte infections primarily found in North America. -
Introduction to Mycology
INTRODUCTION TO MYCOLOGY The term "mycology" is derived from Greek word "mykes" meaning mushroom. Therefore mycology is the study of fungi. The ability of fungi to invade plant and animal tissue was observed in early 19th century but the first documented animal infection by any fungus was made by Bassi, who in 1835 studied the muscardine disease of silkworm and proved the that the infection was caused by a fungus Beauveria bassiana. In 1910 Raymond Sabouraud published his book Les Teignes, which was a comprehensive study of dermatophytic fungi. He is also regarded as father of medical mycology. Importance of fungi: Fungi inhabit almost every niche in the environment and humans are exposed to these organisms in various fields of life. Beneficial Effects of Fungi: 1. Decomposition - nutrient and carbon recycling. 2. Biosynthetic factories. The fermentation property is used for the industrial production of alcohols, fats, citric, oxalic and gluconic acids. 3. Important sources of antibiotics, such as Penicillin. 4. Model organisms for biochemical and genetic studies. Eg: Neurospora crassa 5. Saccharomyces cerviciae is extensively used in recombinant DNA technology, which includes the Hepatitis B Vaccine. 6. Some fungi are edible (mushrooms). 7. Yeasts provide nutritional supplements such as vitamins and cofactors. 8. Penicillium is used to flavour Roquefort and Camembert cheeses. 9. Ergot produced by Claviceps purpurea contains medically important alkaloids that help in inducing uterine contractions, controlling bleeding and treating migraine. 10. Fungi (Leptolegnia caudate and Aphanomyces laevis) are used to trap mosquito larvae in paddy fields and thus help in malaria control. Harmful Effects of Fungi: 1. -
FUNGI Why Care?
FUNGI Fungal Classification, Structure, and Replication -Commonly present in nature as saprophytes, -transiently colonising or etiological agenses. -Frequently present in biological samples. -They role in pathogenesis can be difficult to determine. Why Care? • Fungi are a cause of nosocomial infections. • Fungal infections are a major problem in immune suppressed people. • Fungal infections are often mistaken for bacterial infections, with fatal consequences. Most fungi live harmlessly in the environment, but some species can cause disease in the human host. Patients with weakened immune function admitted to hospital are at high risk of developing serious, invasive fungal infections. Systemic fungal infections are a major problem among critically ill patients in acute care settings and are responsible for an increasing proportion of healthcare- associated infections THE IMPORTANCE OF FUNGI • saprobes • symbionts • commensals • parasites The fungi represent a ubiquitous and diverse group of organisms, the main purpose of which is to degrade organic matter. All fungi lead a heterotrophic existence as saprobes (organisms that live on dead or decaying matter), symbionts (organisms that live together and in which the association is of mutual advantage), commensals (organisms living in a close relationship in which one benefits from the relationship and the other neither benefits nor is harmed), or as parasites (organisms that live on or within a host from which they derive benefits without making any useful contribution in return; in the case of pathogens, the relationship is harmful to the host). Fungi have emerged in the past two decades as major causes of human disease, especially among those individuals who are immunocompromised or hospitalized with serious underlying diseases. -
Developments in Fungal Taxonomy
CLINICAL MICROBIOLOGY REVIEWS, July 1999, p. 454–500 Vol. 12, No. 3 0893-8512/99/$04.00ϩ0 Copyright © 1999, American Society for Microbiology. All Rights Reserved. Developments in Fungal Taxonomy JOSEP GUARRO,* JOSEPA GENE´, AND ALBERTO M. STCHIGEL Unitat de Microbiologia, Departament de Cie`ncies Me`diques Ba`siques, Facultat de Medicina i Cie`ncies de la Salut, Universitat Rovira i Virgili, 43201 Reus, Spain INTRODUCTION .......................................................................................................................................................454 THE CONCEPT OF SPECIES IN FUNGI .............................................................................................................455 PHYLOGENY AND EVOLUTION...........................................................................................................................455 NOMENCLATURE.....................................................................................................................................................456 CURRENT MYCOLOGICAL TYPING METHODS..............................................................................................457 Morphology..............................................................................................................................................................457 Downloaded from Molecular Techniques ............................................................................................................................................459 Other Techniques....................................................................................................................................................460 -
Trichosporon Beigelii Infection Presenting As White Piedra and Onychomycosis in the Same Patient
Trichosporon beigelii Infection Presenting as White Piedra and Onychomycosis in the Same Patient Lt Col Kathleen B. Elmer, USAF; COL Dirk M. Elston, MC, USA; COL Lester F. Libow, MC, USA Trichosporon beigelii is a fungal organism that causes white piedra and has occasionally been implicated as a nail pathogen. We describe a patient with both hair and nail changes associated with T beigelii. richosporon beigelii is a basidiomycetous yeast, phylogenetically similar to Cryptococcus.1 T T beigelii has been found on a variety of mammals and is present in soil, water, decaying plants, and animals.2 T beigelii is known to colonize normal human skin, as well as the respiratory, gas- trointestinal, and urinary tracts.3 It is the causative agent of white piedra, a superficial fungal infection of the hair shaft and also has been described as a rare cause of onychomycosis.4 T beigelii can cause endo- carditis and septicemia in immunocompromised hosts.5 We describe a healthy patient with both white piedra and T beigelii–induced onychomycosis. Case Report A 62-year-old healthy man who worked as a pool maintenance employee was evaluated for thickened, discolored thumb nails (Figure 1). He had been aware of progressive brown-to-black discoloration of the involved nails for 8 months. In addition, soft, light yellow-brown nodules were noted along the shafts of several axillary hairs (Figure 2). Microscopic analysis of the hairs revealed nodal concretions along the shafts (Figure 3). No pubic, scalp, eyebrow, eyelash, Figure 1. Onychomycotic thumb nail. or beard hair involvement was present. Cultures of thumb nail clippings on Sabouraud dextrose agar grew T beigelii and Candida parapsilosis. -
Boards' Fodder
boards’ fodder Medical Mycology By Adriana Schmidt, MD, and Natalie M. Curcio, MD, MPH. (Updated July 2015*) SUPERFICIAL ORGANISM CLINICAL HISTO/KOH TREATMENT MYCOSES* Pityriasis Malessezia furfur Hypo- or hyper-pigmented Spaghetti & meatballs: Antifungal shampoos and/or versicolor macules short hyphae + yeast PO therapy Tinea nigra Hortaea werneckii (formerly Brown-black non-scaly Branching septate hyphae Topical imidazoles or palmaris Phaeoannellomyces werneckii) macules + budding yeast allylamines Black piedra Piedraia hortae Hard firm black Dark hyphae around concretions acrospores Cut hair off, PO terbinafine, White piedra Trichosporon ovoides or inkin Soft loose white Blastoconidia, imidazoles, or triazoles (formely beigelii) concretions arthroconidia Fluorescent small Microsporum Canis KOH: spores on outside spore ectothrix: M. audouinii of the hair shaft; “Cats And Dogs M. distortum Wood’s lamp --> yellow Sometimes Fight T. schoenleinii fluorescence & Growl” M. ferrugineum+/- gypseum Large spore Trichophyton spp. (T. tonsurans in North America; T. violaceum in KOH: spores within hair Topical antifungals; PO endothrix Europe, Asia, parts of Africa). shaft antifungals for T. manuum, Tinea corporis T. rubrum > T. mentag. Majocchi’s granuloma: T. rubrum capitis, unguium T. pedis Moccasin: T. rubrum, E. floccosum. Interdigital/vesicular: T. mentag T. unguium Distal lateral, proximal and proximal white subungual: T. rubrum. White superficial: T. mentag. HIV: T. rubrum SUBQ MYCOSES** ORGANISM TRANSMISSION CLINICAL HISTO/KOH TREATMENT -
Pathogenicity Classification of Fungi Status December 2014 (CGM/141218-03)
Classification of Organisms: Pathogenicity classification of fungi Status December 2014 (CGM/141218-03) COGEM advice CGM/141218-03 Pathogenicity classification of fungi COGEM advice CGM/141218-03 Dutch Regulations Genetically Modified Organisms In the Decree on Genetically Modified Organisms (GMO Decree) and its accompanying more detailed Regulations (GMO Regulations) genetically modified micro-organisms are grouped in four pathogenicity classes, ranging from the lowest pathogenicity Class 1 to the highest Class 4.1 The pathogenicity classifications are used to determine the containment level for working in laboratories with GMOs. A micro-organism of Class 1 should at least comply with one of the following conditions: a) the micro-organism does not belong to a species of which representatives are known to be pathogenic for humans, animals or plants, b) the micro-organism has a long history of safe use under conditions without specific containment measures, c) the micro-organism belongs to a species that includes representatives of class 2, 3 or 4, but the particular strain does not contain genetic material that is responsible for the virulence, d) the micro-organism has been shown to be non-virulent through adequate tests. A micro-organism is grouped in Class 2 when it can cause a disease in humans or animals whereby it is unlikely to spread within the population while an effective prophylaxis, treatment or control strategy exists, as well as an organism that can cause a disease in plants. A micro-organism is grouped in Class 3 when it can cause a serious disease in humans or animals whereby it is likely to spread within the population while an effective prophylaxis, treatment or control strategy exists. -
Fungal Infections in HIV-Positive Peruvian Patients: Could the Venezuelan Migration Cause a Health Warning Related-Infectious Diseases?
Moya-Salazar J, Salazar-Hernández R, Rojas-Zumaran V, Quispe WC. Fungal Infections in HIV-positive Peruvian Patients: Could the Venezuelan Migration Cause a Health Warning Related-infectious Diseases?. J Infectiology. 2019; 2(2): 3-10 Journal of Infectiology Journal of Infectiology Research Article Open Access Fungal Infections in HIV-positive Peruvian Patients: Could the Venezuelan Migration Cause a Health Warning Related-infectious Diseases? Jeel Moya-Salazar1,2*, Richard Salazar-Hernández3, Victor Rojas-Zumaran2, Wanda C. Quispe3 1School of Medicine, Faculties of Health Science, Universidad Privada Norbert Wiener, Lima, Peru 2Pathology Department, Hospital Nacional Docente Madre Niño San Bartolomé, Lima, Peru 3Cytopathology and Genetics Service, Department of Pathology, Hospital Nacional Guillermo Almenara Irigoyen, Lima, Peru Article Info Abstract Article Notes In patients with human immunodeficiency virus (HIV), opportunistic Received: December 22, 2018 infections occur that could compromise the health of patients. In order to Accepted: March 7, 2019 determine the frequency of fungal opportunistic and superficial infections *Correspondence: in HIV-positive men-who-have-sex-with-men (MSM) patients at the Hospital Jeel Moya-Salazar, M.T, M.Sc., 957 Pacific Street, Urb. Sn Nacional Guillermo Almenara, we conducted a cross-sectional retrospective Felipe, 07 Lima, Lima 51001, Peru; Telephone No: +51 986- study. We include Peruvian patients >18 years-old, derived from infectious or 014-954; Email: [email protected]. gynecological offices, with or without antiretroviral treatment. © 2019 Moya-Salazar J. This article is distributed under the One hundred thirteen patients were enrolled (36.7±10, range: 21 to terms of the Creative Commons Attribution 4.0 International 68 years), which 46 (40.7%) has an opportunistic fungal infection, mainly License. -
Anti Fungal Activity of Thyme Oil Against Citrus Sour
Journal of Applied Microbiology ISSN 1364-5072 ORIGINAL ARTICLE Antifungal activity of thyme oil against Geotrichum citri-aurantii in vitro and in vivo X. Liu1, L.P. Wang2, Y.C. Li1, H.Y. Li3,T.Yu1 and X.D. Zheng1 1 Department of Food Science and Nutrition, Zhejiang University, Hangzhou, Zhejiang, China 2 Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, China 3 Biotechnology Institute, Zhejiang University, Hangzhou, Zhejiang, China Keywords Abstract citrus fruit, Galactomyces citri-aurantii, Geotrichum citri-aurantii, sour rot, thyme oil. Aims: To investigate antifungal effect of thyme oil on Geotrichum citri-aurantii arthroconidia germination and germ tube elongation, to reveal effects of thyme Correspondence oil on morphological structures on fungal hyphae and arthroconidia and to Xiadong Zheng, Department of Food Science assess potential bio-control capacities of thyme oil against disease suppression and Nutrition, Zhejiang University, Hangzhou, in vivo conditions. Zhejiang, China. E-mail: [email protected] Methods and Results: Thyme oil controlled the growth of G. citri-aurantii 2009 ⁄ 0246: received 7 February 2009, effectively. Arthroconidia germination and germ tube elongation in potato )1 revised 11 March 2009 and accepted dextrose broth was greatly inhibited by thyme oil. At 600 lll , it inhibited 12 March 2009 the germination of about 94% of the arthroconidia and the germ tube length was only 4Æ32 ± 0Æ28 lm. Observations using light microscope, scanning elec- doi:10.1111/j.1365-2672.2009.04328.x tron microscope and transmission electron microscope revealed ultrastructural modifications caused by thyme oil that included markedly shrivelled and crinkled hyphae and arthroconidia, plasma membrane disruption and mito- chondrial disorganization. -
Histopathology of Important Fungal Infections
Journal of Pathology of Nepal (2019) Vol. 9, 1490 - 1496 al Patholo Journal of linic gist C of of N n e o p ti a a l- u i 2 c 0 d o n s 1 s 0 a PATHOLOGY A m h t N a e K , p d of Nepal a l a M o R e d n i io ca it l A ib ss xh www.acpnepal.com oc g E iation Buildin Review Article Histopathology of important fungal infections – a summary Arnab Ghosh1, Dilasma Gharti Magar1, Sushma Thapa1, Niranjan Nayak2, OP Talwar1 1Department of Pathology, Manipal College of Medical Sciences, Pokhara, Nepal. 2Department of Microbiology, Manipal College of Medical Sciences , Pokhara, Nepal. ABSTRACT Keywords: Fungus; Fungal infections due to pathogenic or opportunistic fungi may be superficial, cutaneous, subcutaneous Mycosis; and systemic. With the upsurge of at risk population systemic fungal infections are increasingly common. Opportunistic; Diagnosis of fungal infections may include several modalities including histopathology of affected tissue Systemic which reveal the morphology of fungi and tissue reaction. Fungi can be in yeast and / or hyphae forms and tissue reactions may range from minimal to acute or chronic granulomatous inflammation. Different fungi should be differentiated from each other as well as bacteria on the basis of morphology and also clinical correlation. Special stains like GMS and PAS are helpful to identify fungi in tissue sections. INTRODUCTION Correspondence: Dr Arnab Ghosh, MD Fungal infections or mycoses may be caused by Department of Pathology, pathogenic fungi which infect healthy individuals or by Manipal College of Medical Sciences, Pokhara, Nepal. -
Two Cases of Scalp White Piedra Caused by Trichosporon Ovoides
Case TTwowo ccasesases ooff sscalpcalp wwhitehite ppiedraiedra causedcaused byby Report TTrichosporonrichosporon ovoidesovoides SSwagatawagata AA.. TTambe,ambe, SS.. RRachitaachita DDhurat,hurat, CChayahaya A.A. KKumarumar1, PPreetireeti TThakare,hakare, NNitinitin LLade,ade, HHemangiemangi Jerajani,Jerajani, MMeenakshieenakshi MathurMathur 1 Departments of Dermatology ABSTRACT and 1Microbiology, Lokmanya Tilak Municipal Medical White piedra is a superÞ cial fungal infection of the hair shaft, caused by Trichosporon beigelii. College and General Hospital, Sion Mumbai - 400 022, India We report two cases of white piedra presenting as brown palpable nodules along the hair shaft with a fragility of scalp hairs. T. beigelii was demonstrated in hair culture of both the patients Address for correspondence: and T. ovoides as a species was conÞ rmed on carbohydrate assimilation test. The Þ rst patient Dr. Swagata Arvind Tambe, responded to oral itraconazole and topical ketoconazole, with a decrease in the palpability of 19/558, Udyan Housing nodules and fragility of scalp hairs at the end of two months. Society, Nehru Nagar, Kurla (East), Key words: White piedra, Carbohydrate assimilation test, Itraconazole, Trichosporon ovoides Mumbai – 400 024, India. E-mail: [email protected] DOI: 10.4103/0378-6323.51256 PMID: 19439885 IINTRODUCTIONNTRODUCTION with fragility for 3 and 2 months, respectively. Both the patients had a history of tying wet hairs after washing. White piedra is a superficial fungal infection of Other hairy parts of the body were not similarly the hair shaft, caused by Trichosporon beigelii, also affected in both. Their family members had no similar known as tinea nodosa, trichosporonosis nodosa involvement. Both had never visited southern parts of and trichomycosis nodularis.[1] Common areas of India or used oils excessively. -
Monograph on Dematiaceous Fungi
Monograph On Dematiaceous fungi A guide for description of dematiaceous fungi fungi of medical importance, diseases caused by them, diagnosis and treatment By Mohamed Refai and Heidy Abo El-Yazid Department of Microbiology, Faculty of Veterinary Medicine, Cairo University 2014 1 Preface The first time I saw cultures of dematiaceous fungi was in the laboratory of Prof. Seeliger in Bonn, 1962, when I attended a practical course on moulds for one week. Then I handled myself several cultures of black fungi, as contaminants in Mycology Laboratory of Prof. Rieth, 1963-1964, in Hamburg. When I visited Prof. DE Varies in Baarn, 1963. I was fascinated by the tremendous number of moulds in the Centraalbureau voor Schimmelcultures, Baarn, Netherlands. On the other hand, I was proud, that El-Sheikh Mahgoub, a Colleague from Sundan, wrote an internationally well-known book on mycetoma. I have never seen cases of dematiaceous fungal infections in Egypt, therefore, I was very happy, when I saw the collection of mycetoma cases reported in Egypt by the eminent Egyptian Mycologist, Prof. Dr Mohamed Taha, Zagazig University. To all these prominent mycologists I dedicate this monograph. Prof. Dr. Mohamed Refai, 1.5.2014 Heinz Seeliger Heinz Rieth Gerard de Vries, El-Sheikh Mahgoub Mohamed Taha 2 Contents 1. Introduction 4 2. 30. The genus Rhinocladiella 83 2. Description of dematiaceous 6 2. 31. The genus Scedosporium 86 fungi 2. 1. The genus Alternaria 6 2. 32. The genus Scytalidium 89 2.2. The genus Aurobasidium 11 2.33. The genus Stachybotrys 91 2.3. The genus Bipolaris 16 2.