Sunol Regional Wilderness Checklist of Wild Plants Sorted Alphabetically by Growth Form, Scientific Name
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Biological Resources Assessment for the Cannabis Cultivation Operation at 6233 Eickhoff Road, Lakeport, California
BIOLOGICAL RESOURCES ASSESSMENT FOR THE CANNABIS CULTIVATION OPERATION AT 6233 EICKHOFF ROAD, LAKEPORT, CALIFORNIA February 14, 2020 Applicant: Huntz, Inc. 6233 Eickhoff Road, Lakeport, CA 95453 Prepared by: G.O. Graening, PhD and Tim Nosal, MS Natural Investigations Company, Inc. 3104 O Street, #221, Sacramento, CA 95816 Bio. Assessment TABLE OF CONTENTS 1. INTRODUCTION ........................................................................................................................... 2 1.1. PROJECT LOCATION AND DESCRIPTION ........................................................................... 2 1.2. PURPOSE AND SCOPE OF ASSESSMENT .......................................................................... 2 1.3. REGULATORY SETTING ........................................................................................................ 2 1.3.1. Special-status Species Regulations .................................................................................. 2 1.3.2. Water Resource Protection ............................................................................................... 4 1.3.3. Tree Protection ................................................................................................................. 5 2. ENVIRONMENTAL SETTING ........................................................................................................ 6 3. METHODOLOGY ........................................................................................................................... 6 3.1. PRELIMINARY DATA GATHERING -
Phylogenetic Models Linking Speciation and Extinction to Chromosome and Mating System Evolution
Phylogenetic Models Linking Speciation and Extinction to Chromosome and Mating System Evolution by William Allen Freyman A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Integrative Biology and the Designated Emphasis in Computational and Genomic Biology in the Graduate Division of the University of California, Berkeley Committee in charge: Dr. Bruce G. Baldwin, Chair Dr. John P. Huelsenbeck Dr. Brent D. Mishler Dr. Kipling W. Will Fall 2017 Phylogenetic Models Linking Speciation and Extinction to Chromosome and Mating System Evolution Copyright 2017 by William Allen Freyman Abstract Phylogenetic Models Linking Speciation and Extinction to Chromosome and Mating System Evolution by William Allen Freyman Doctor of Philosophy in Integrative Biology and the Designated Emphasis in Computational and Genomic Biology University of California, Berkeley Dr. Bruce G. Baldwin, Chair Key evolutionary transitions have shaped the tree of life by driving the processes of spe- ciation and extinction. This dissertation aims to advance statistical and computational ap- proaches that model the timing and nature of these transitions over evolutionary trees. These methodological developments in phylogenetic comparative biology enable formal, model- based, statistical examinations of the macroevolutionary consequences of trait evolution. Chapter 1 presents computational tools for data mining the large-scale molecular sequence datasets needed for comparative phylogenetic analyses. I describe a novel metric, the miss- ing sequence decisiveness score (MSDS), which assesses the phylogenetic decisiveness of a matrix given the pattern of missing sequence data. In Chapter 2, I introduce a class of phylogenetic models of chromosome number evolution that accommodate both anagenetic and cladogenetic change. -
Tejon Ranch Botanical Survey Report
David Magney Environmental Consulting FLORA OF THE TEJON RANCH CONSERVANCY ACQUISITION AREAS, TEJON RANCH, CALIFORNIA Prepared for: TEJON RANCH CONSERVANCY July 2010 DMEC Mission Statement: To provide quality environmental consulting services, with integrity, that protect and enhance the human and natural environment. David Magney Environmental Consulting Flora of the Tejon Ranch Conservancy Acquisition Areas, Tejon Ranch, California Prepared for: Tejon Ranch Conservancy P.O. Box 216 Frazier Park, California 93225 Contact: Michael White Phone: 661/-248-2400 ext 2 Prepared by: David Magney Environmental Consulting P.O. Box 1346 Ojai, California 93024-1346 Phone: 805/646-6045 23 July 2010 DMEC Mission Statement: To provide quality environmental consulting services, with integrity, that protect and enhance the human and natural environment. This document should be cited as: David Magney Environmental Consulting. 2010. Flora of the Tejon Ranch Conservancy Acquisition Areas, Tejon Ranch, California. 23 July2010. (PN 09-0001.) Ojai, California. Prepared for Tejon Ranch Conservancy, Frazier Park, California. Tejon Ranch Conservancy – Flora of Tejon Ranch Acquisition Areas Project No. 09-0001 DMEC July 2010 TABLE OF CONTENTS Page SECTION 1. INTRODUCTION............................................................................. 1 SECTION 2. METHODS ........................................................................................ 3 Field Survey Methods .......................................................................................................... -
Outline of Angiosperm Phylogeny
Outline of angiosperm phylogeny: orders, families, and representative genera with emphasis on Oregon native plants Priscilla Spears December 2013 The following listing gives an introduction to the phylogenetic classification of the flowering plants that has emerged in recent decades, and which is based on nucleic acid sequences as well as morphological and developmental data. This listing emphasizes temperate families of the Northern Hemisphere and is meant as an overview with examples of Oregon native plants. It includes many exotic genera that are grown in Oregon as ornamentals plus other plants of interest worldwide. The genera that are Oregon natives are printed in a blue font. Genera that are exotics are shown in black, however genera in blue may also contain non-native species. Names separated by a slash are alternatives or else the nomenclature is in flux. When several genera have the same common name, the names are separated by commas. The order of the family names is from the linear listing of families in the APG III report. For further information, see the references on the last page. Basal Angiosperms (ANITA grade) Amborellales Amborellaceae, sole family, the earliest branch of flowering plants, a shrub native to New Caledonia – Amborella Nymphaeales Hydatellaceae – aquatics from Australasia, previously classified as a grass Cabombaceae (water shield – Brasenia, fanwort – Cabomba) Nymphaeaceae (water lilies – Nymphaea; pond lilies – Nuphar) Austrobaileyales Schisandraceae (wild sarsaparilla, star vine – Schisandra; Japanese -
Redmond Watershed Preserve King County, Washington
Vascular Plant List: Redmond Watershed Preserve King County, Washington Partial list covers plants found in the 800-acre watershed managed by the city of Redmond primarily as a nature preserve. Habitats include shady 90-year old forest, sunny disturbed utility corridors, ephemeral drainages, perennial streams, ponds and other wetlands. The preserve has 7 miles of trails (see external links below), most of which are multi-use and a couple of which are ADA accessible. List originally compiled by Fred Weinmann in February 2002. Ron Bockelman made additions in 2018. 128 species (83 native, 45 introduced) Directions: 21760 NE Novelty Hill Rd, Redmond, WA 98052 is the physical address. Drive 2.3 miles east on Novelty Hill Rd from its junction with Avondale Rd. Turn left at the entrance across from 218 Ave NE and continue to the parking lot, information kiosk, and restrooms. Ownership: City of Redmond Access: Open during daylight hours. No pets allowed. Permits: None External Links: https://www.wta.org/go-hiking/hikes/redmond-watershed-preserve https://www.alltrails.com/parks/us/washington/redmond-watershed-preserve Coordinates: 47.695943°, -122.051161° Elevation: 300 - 700 feet Key to symbols: * = Introduced species. ? = Uncertain identification. + = Species is represented by two or more subspecies or varieties in Washington; the species in this list has not been identified to subspecies or variety. ! = Species is not known to occur near this location based on specimen records in the PNW Herbaria database, and may be misidentified. # = Species name could not be resolved to an accepted name; the name may be misspelled. Numeric superscripts after a scientific name indicates the name was more broadly circumscribed in the past, and has since been split into two or more accepted taxa in Washington. -
Checklist of the Vascular Plants of Redwood National Park
Humboldt State University Digital Commons @ Humboldt State University Botanical Studies Open Educational Resources and Data 9-17-2018 Checklist of the Vascular Plants of Redwood National Park James P. Smith Jr Humboldt State University, [email protected] Follow this and additional works at: https://digitalcommons.humboldt.edu/botany_jps Part of the Botany Commons Recommended Citation Smith, James P. Jr, "Checklist of the Vascular Plants of Redwood National Park" (2018). Botanical Studies. 85. https://digitalcommons.humboldt.edu/botany_jps/85 This Flora of Northwest California-Checklists of Local Sites is brought to you for free and open access by the Open Educational Resources and Data at Digital Commons @ Humboldt State University. It has been accepted for inclusion in Botanical Studies by an authorized administrator of Digital Commons @ Humboldt State University. For more information, please contact [email protected]. A CHECKLIST OF THE VASCULAR PLANTS OF THE REDWOOD NATIONAL & STATE PARKS James P. Smith, Jr. Professor Emeritus of Botany Department of Biological Sciences Humboldt State Univerity Arcata, California 14 September 2018 The Redwood National and State Parks are located in Del Norte and Humboldt counties in coastal northwestern California. The national park was F E R N S established in 1968. In 1994, a cooperative agreement with the California Department of Parks and Recreation added Del Norte Coast, Prairie Creek, Athyriaceae – Lady Fern Family and Jedediah Smith Redwoods state parks to form a single administrative Athyrium filix-femina var. cyclosporum • northwestern lady fern unit. Together they comprise about 133,000 acres (540 km2), including 37 miles of coast line. Almost half of the remaining old growth redwood forests Blechnaceae – Deer Fern Family are protected in these four parks. -
Rinconada Checklist-02Jun19
Checklist1 of Vascular Flora of Rinconada Mine and Rinconada Trail San Luis Obispo County, California (2 June 2019) David J. Keil Robert F. Hoover Herbarium Biological Sciences Department California Polytechnic State University San Luis Obispo, California Scientific Name Common Name Family Rare n ❀ Achyrachaena mollis blow wives ASTERACEAE o n ❀ Acmispon americanus var. americanus Spanish-clover FABACEAE o n Acmispon brachycarpus shortpod deervetch FABACEAE v n ❀ Acmispon glaber var. glaber common deerweed FABACEAE o n Acmispon parviflorus miniature deervetch FABACEAE o n ❀ Acmispon strigosus strigose deer-vetch FABACEAE o 1 Please notify the author of additions or corrections to this list ([email protected]). ❀ — See Wildflowers of San Luis Obispo, California, second edition (2018) for photograph. Most are illustrated in the first edition as well; old names for some species in square brackets. n — California native i — exotic species, introduced to California, naturalized or waif. v — documented by one or more specimens (Consortium of California Herbaria record; specimen in OBI; or collection that has not yet been accessioned) o — observed during field surveys; no voucher specimen known Rare—California Rare Plant Rank Scientific Name Common Name Family Rare n Acmispon wrangelianus California deervetch FABACEAE v n ❀ Acourtia microcephala sacapelote ASTERACEAE o n ❀ Adelinia grandis Pacific hound's tongue BORAGINACEAE v n ❀ Adenostoma fasciculatum var. chamise ROSACEAE o fasciculatum n Adiantum jordanii California maidenhair fern PTERIDACEAE o n Agastache urticifolia nettle-leaved horsemint LAMIACEAE v n ❀ Agoseris grandiflora var. grandiflora large-flowered mountain-dandelion ASTERACEAE v n Agoseris heterophylla var. cryptopleura annual mountain-dandelion ASTERACEAE v n Agoseris heterophylla var. heterophylla annual mountain-dandelion ASTERACEAE o i Aira caryophyllea silver hairgrass POACEAE o n Allium fimbriatum var. -
Biological Resources Assessment the Ranch ±530- Acre Study Area City of Rancho Cordova, California
Biological Resources Assessment The Ranch ±530- Acre Study Area City of Rancho Cordova, California Prepared for: K. Hovnanian Homes October 13, 2017 Prepared by: © 2017 TABLE OF CONTENTS 1.0 Introduction ......................................................................................................................... 1 1.1. Project Description ........................................................................................................... 1 2.0 Regulatory Framework ........................................................................................................ 2 2.1. Federal Regulations .......................................................................................................... 2 2.1.1. Federal Endangered Species Act ............................................................................... 2 2.1.2. Migratory Bird Treaty Act ......................................................................................... 2 2.1.3. The Bald and Golden Eagle Protection Act ............................................................... 2 2.2. State Jurisdiction .............................................................................................................. 3 2.2.1. California Endangered Species Act ........................................................................... 3 2.2.2. California Department of Fish and Game Codes ...................................................... 3 2.2.3. Native Plant Protection Act ..................................................................................... -
2004 Vegetation Classification and Mapping of Peoria Wildlife Area
Vegetation classification and mapping of Peoria Wildlife Area, South of New Melones Lake, Tuolumne County, California By Julie M. Evens, Sau San, and Jeanne Taylor Of California Native Plant Society 2707 K Street, Suite 1 Sacramento, CA 95816 In Collaboration with John Menke Of Aerial Information Systems 112 First Street Redlands, CA 92373 November 2004 Table of Contents Introduction.................................................................................................................................................... 1 Vegetation Classification Methods................................................................................................................ 1 Study Area ................................................................................................................................................. 1 Figure 1. Survey area including Peoria Wildlife Area and Table Mountain .................................................. 2 Sampling ................................................................................................................................................ 3 Figure 2. Locations of the field surveys. ....................................................................................................... 4 Existing Literature Review ......................................................................................................................... 5 Cluster Analyses for Vegetation Classification ......................................................................................... -
Edible Seeds and Grains of California Tribes
National Plant Data Team August 2012 Edible Seeds and Grains of California Tribes and the Klamath Tribe of Oregon in the Phoebe Apperson Hearst Museum of Anthropology Collections, University of California, Berkeley August 2012 Cover photos: Left: Maidu woman harvesting tarweed seeds. Courtesy, The Field Museum, CSA1835 Right: Thick patch of elegant madia (Madia elegans) in a blue oak woodland in the Sierra foothills The U.S. Department of Agriculture (USDA) prohibits discrimination in all its pro- grams and activities on the basis of race, color, national origin, age, disability, and where applicable, sex, marital status, familial status, parental status, religion, sex- ual orientation, genetic information, political beliefs, reprisal, or because all or a part of an individual’s income is derived from any public assistance program. (Not all prohibited bases apply to all programs.) Persons with disabilities who require alternative means for communication of program information (Braille, large print, audiotape, etc.) should contact USDA’s TARGET Center at (202) 720-2600 (voice and TDD). To file a complaint of discrimination, write to USDA, Director, Office of Civil Rights, 1400 Independence Avenue, SW., Washington, DC 20250–9410, or call (800) 795-3272 (voice) or (202) 720-6382 (TDD). USDA is an equal opportunity provider and employer. Acknowledgments This report was authored by M. Kat Anderson, ethnoecologist, U.S. Department of Agriculture, Natural Resources Conservation Service (NRCS) and Jim Effenberger, Don Joley, and Deborah J. Lionakis Meyer, senior seed bota- nists, California Department of Food and Agriculture Plant Pest Diagnostics Center. Special thanks to the Phoebe Apperson Hearst Museum staff, especially Joan Knudsen, Natasha Johnson, Ira Jacknis, and Thusa Chu for approving the project, helping to locate catalogue cards, and lending us seed samples from their collections. -
How Many of Cassini Anagrams Should There Be? Molecular
TAXON 59 (6) • December 2010: 1671–1689 Galbany-Casals & al. • Systematics and phylogeny of the Filago group How many of Cassini anagrams should there be? Molecular systematics and phylogenetic relationships in the Filago group (Asteraceae, Gnaphalieae), with special focus on the genus Filago Mercè Galbany-Casals,1,3 Santiago Andrés-Sánchez,2,3 Núria Garcia-Jacas,1 Alfonso Susanna,1 Enrique Rico2 & M. Montserrat Martínez-Ortega2 1 Institut Botànic de Barcelona (CSIC-ICUB), Pg. del Migdia s.n., 08038 Barcelona, Spain 2 Departamento de Botánica, Facultad de Biología, Universidad de Salamanca, 37007 Salamanca, Spain 3 These authors contributed equally to this publication. Author for correspondence: Mercè Galbany-Casals, [email protected] Abstract The Filago group (Asteraceae, Gnaphalieae) comprises eleven genera, mainly distributed in Eurasia, northern Africa and northern America: Ancistrocarphus, Bombycilaena, Chamaepus, Cymbolaena, Evacidium, Evax, Filago, Logfia, Micropus, Psilocarphus and Stylocline. The main morphological character that defines the group is that the receptacular paleae subtend, and more or less enclose, the female florets. The aims of this work are, with the use of three chloroplast DNA regions (rpl32-trnL intergenic spacer, trnL intron, and trnL-trnF intergenic spacer) and two nuclear DNA regions (ITS, ETS), to test whether the Filago group is monophyletic; to place its members within Gnaphalieae using a broad sampling of the tribe; and to investigate in detail the phylogenetic relationships among the Old World members of the Filago group and provide some new insight into the generic circumscription and infrageneric classification based on natural entities. Our results do not show statistical support for a monophyletic Filago group. -
Characterization of CYP71AX36 from Sunflower (Helianthus Annuus L., Asteraceae)
www.nature.com/scientificreports OPEN Characterization of CYP71AX36 from Sunfower (Helianthus annuus L., Asteraceae) Received: 23 April 2019 Maximilian Frey 1, Iris Klaiber2, Jürgen Conrad3, Aylin Bersch1, Irini Pateraki 4, Accepted: 10 September 2019 Dae-Kyun Ro5 & Otmar Spring1 Published: xx xx xxxx Sesquiterpene lactones (STL) are a subclass of isoprenoids with many known bioactivities frequently found in the Asteraceae family. In recent years, remarkable progress has been made regarding the biochemistry of STL, and today the biosynthetic pathway of the core backbones of many STLs has been elucidated. Consequently, the focus has shifted to the discovery of the decorating enzymes that can modify the core skeleton with functional hydroxy groups. Using in vivo pathway reconstruction assays in heterologous organisms such as Saccharomyces cerevisiae and Nicotiana benthamiana, we have analyzed several cytochrome P450 enzyme genes of the CYP71AX subfamily from Helianthus annuus clustered in close proximity to one another on the sunfower genome. We show that one member of this subfamily, CYP71AX36, can catalyze the conversion of costunolide to 14-hydroxycostunolide. The catalytic activity of CYP71AX36 may be of use for the chemoenzymatic production of antileukemic 14-hydroxycostunolide derivatives and other STLs of pharmaceutical interest. We also describe the full 2D-NMR assignment of 14-hydroxycostunolide and provide all 13C chemical shifts of the carbon skeleton for the frst time. Sesquiterpene lactones (STL) are a diverse group of specialized plant metabolites, particularly characteristic to the Asteraceae family, which contain a C15 backbone and an α-methylene γ-lactone ring1. Recently, the enzy- matic steps leading to the basic 6,7-cis and 7,8-trans STL structures, such as costunolide (1) and inunolide, have been described.