Aquaculture Journals – Table of Contents

With the financial support of

Flemish Interuniversity Councel

Aquaculture Journals – Table of Contents May 2012

Information of interest !! Animal Feed Science and Technology * Antimicrobial Agents and Chemotherapy Applied and Environmental Microbiology Applied Microbiology and Biotechnology Aqua Aquaculture * Aquaculture Economics & Management Aquacultural Engineering * Aquaculture International * Aquaculture Nutrition * Aquaculture Research * Current Opinion in Microbiology * Diseases of Aquatic Organisms * Fish & Shellfish Immunology * Fisheries Science * Hydrobiologia * Indian Journal of Fisheries International Journal of Aquatic Science Journal of Applied Ichthyology * Journal of Applied Microbiology * Journal of Applied Phycology Journal of Aquaculture Research and Development Journal of Experimental Marine Biology and Ecology * Journal of Fish Biology Journal of Fish Diseases * Journal of Invertebrate Pathology* Journal of Microbial Ecology*

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Journal of Microbiological Methods Journal of Shellfish Research Journal of the World Aquaculture Society Letters in Applied Microbiology * Marine Biology * Marine Biotechnology * Nippon Suisan Gakkaishi Reviews in Aquaculture Trends in Biotechnology *

Trends in Microbiology * * full text available

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BibMail Information of Interest - May, 2012

 FAO/NACA, 2012. Farming the Waters for People and Food. R.P. Subasinghe, J.R. Arthur, D.M. Bartley, S.S. De Silva, M. Halwart, N. Hishamunda, C.V. Mohan & P. Sorgeloos, (Eds.) Proceedings of the Global Conference on Aquaculture 2010, Phuket, Thailand. 22–25 September 2010. FAO, Rome and NACA, Bangkok. 896 pp. available online

VLIZ Library Acquisitions no

 543 May 4, 2012

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VOLUME 174, PART 1-2, JUNE 2012 Website

Research articles

Review

Lipid metabolism in the rumen: New insights on lipolysis and biohydrogenation with an emphasis on the role of endogenous plant factors Arianna Buccioni, Mauro Decandia, Sara Minieri, Giovanni Molle, Andrea Cabiddu Show preview | PDF (2333 K) | Related articles | Related reference work articles

Ruminants

Influence of dietary plant oils on mammary lipogenic enzymes and the conjugated linoleic acid content of plasma and milk fat of lactating goats X.Z. Li, C.G. Yan, H.G. Lee, C.W. Choi, M.K. Song Show preview | PDF (311 K) | Related articles | Related reference work articles

Causes of variation in fatty acid content and composition in grass and maize silages N.A. Khan, J.W. Cone, V. Fievez, W.H. Hendriks Show preview | PDF (505 K) | Related articles | Related reference work articles

Forage quality of native warm-season grasses in response to nitrogen fertilization and harvest date Naroon Waramit, Kenneth J. Moore, Steven L. Fales Show preview | PDF (1220 K) | Related articles | Related reference work articles

Effects of dietary Astragalus polysaccharide and Astragalus membranaceus root supplementation on growth performance, rumen fermentation, immune responses, and antioxidant status of lambs R.Z. Zhong, M. Yu, H.W. Liu, H.X. Sun, Y. Cao, D.W. Zhou Show preview | PDF (277 K) | Related articles | Related reference work articles

A fat based rumen protection technology post-ruminally delivers a B vitamin complex to impact performance of multiparous Holstein cows Sérgio O. Juchem, P.H. Robinson, Essi Evans Show preview | PDF (391 K) | Related articles | Related reference work articles

Non-ruminants

Zearalenone enhances reproductive tract development, but does not alter skeletal muscle signaling in prepubertal gilts W.T. Oliver, J.R. Miles, D.E. Diaz, J.J. Dibner, G.E. Rottinghaus, R.J. Harrell Show preview | PDF (243 K) | Related articles | Related reference work articles

Effect of seven carbohydrate sources on juvenile Penaeus monodon growth performance, nutrient utilization efficiency and hepatopancreas enzyme activities of 6-phosphogluconate dehydrogenase, hexokinase and amylase

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Jin Niu, Hei-Zhao Lin, Shi-Gui Jiang, Xu Chen, Kai-Chang Wu, Li-Xia Tian, Yong-Jian Liu Show preview | PDF (320 K) | Related articles | Related reference work articles

Environmental impacts of feed technologies in animal production

Low protein diets and rumen-protected conjugated linoleic acid increase nitrogen efficiency and reduce the environmental impact of double-muscled young Piemontese bulls S. Schiavon, F. Tagliapietra, G. Dalla Montà, A. Cecchinato, G. Bittante Show preview | PDF (471 K) | Related articles | Related reference work articles

Short communication

The effect of feeding lentil on growth performance and diet nutrient digestibility in starter pigs J.L. Landero, E. Beltranena, R.T. Zijlstra Show preview | PDF (190 K) | Related articles | Related reference work articles

Book reviews

J.A. Newman, M. Anand, H.A.L. Henry, S. Hunt, Z. Gedalof,Editors, ,Climate Change Biology (2011) CAB International,Wallingford (UK) and Cambridge (USA) 289 pp.; Hardback: 145 US$, 75 £, 105 €; Paperback: 75 US$, 39.95 £, 55 €, ISBN-13: 978 1 84593 670 9 (paperback); 978 1 84593 748 5 (hardback). Gerhard Flachowsky Show preview | PDF (111 K) | Related articles | Related reference work articles

Climate Change and Crop Production edited by M.P. Reynolds, CIMMYT Mexico. CAB International, Wallingford, UK and Cambridge, USA, (2010). 292 pp.; Hardback: 160 US$, 85 £, 120 €, ISBN-13: 978 1 84593 633 4 (Reprinted 2011). Gerhard Flachowsky Show preview | PDF (121 K) | Related articles | Related reference work articles

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VOLUME 174, PART 3-4, JUNE 2012 Website

Research articles

Review

A review on the use of indigestible dietary markers to determine total tract apparent digestibility of nutrients in horses J. Sales Show preview | PDF (428 K) | Related articles | Related reference work articles

Ruminants

Effects of energy level and Leucaena leucocephala leaf meal as a protein source on rumen fermentation efficiency and digestibility in swamp buffalo S. Kang, M. Wanapat, P. Pakdee, R. Pilajun, A. Cherdthong Aquaculture Journals Page: 5 of 169

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Show preview | PDF (306 K) | Related articles | Related reference work articles

Impacts of silica levels, and location in the detergent fiber matrix, on in vitro gas production of rice straw G.A. Nader, G.S. Cun, P.H. Robinson Show preview | PDF (300 K) | Related articles | Related reference work articles

Broiler litter as an alternative feedstuff for Awassi ewes: Effect on nursing performance and their lambs’ performance B.S. Obeidat, H.J. Al-Tamimi, T.M. Osaili, M.S. Awawdeh, M.A. Abu Ishmais Show preview | PDF (204 K) | Related articles | Related reference work articles

Effect of malate and starch source on digestibility and nutrient balance of growing-fattening lambs M. Mungói, C. Flores, R. Casals, G. Caja Show preview | PDF (282 K) | Related articles | Related reference work articles

Non-ruminants

In vitro starch digestion and predicted glycemic index of cereal grains commonly utilized in pig nutrition G. Giuberti, A. Gallo, C. Cerioli, F. Masoero Show preview | PDF (457 K) | Related articles | Related reference work articles

Effect of substitution of medium-chain organic acids for zinc bacitracin in a diet containing colistin on performance and development of intestinal lymphoid tissues in growing rabbits experimentally infected with Escherichia coli O103 and Clostridium perfringens toxinotype A C. Romero, P.G. Rebollar, L. Moscati, A. Dal Bosco, C. Castellini, R. Cardinali Show preview | PDF (461 K) | Related articles | Related reference work articles

Effects of the inclusion of carbohydrases and different soybean meals in the diet on palatability, digestibility and faecal characteristics in dogs A.P. Félix, M.P. Carvalho, L.G. Alarça, C.B.M. Brito, S.G. Oliveira, A. Maiorka Show preview | PDF (263 K) | Related articles | Related reference work articles

Environmental impacts of feed technologies in animal production

Development of an in vitro method for determination of methane production kinetics using a fully automated in vitro gas system—A modelling approach M. Ramin, P. Huhtanen Show preview | PDF (512 K) | Related articles | Related reference work articles

General topic

The effect of inoculant and sucrose addition on the silage quality of tropical forage legumes with varying ensilability Sonja N. Heinritz, Siriwan D. Martens, Patricia Avila, Sandra Hoedtke Show preview | PDF (498 K) | Related articles | Related reference work articles

Conference report

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Successes and failures with animal nutrition practices and technologies in developing countries: A synthesis of an FAO e-conference Emyr Owen, Tim Smith, Harinder Makkar Show preview | PDF (363 K) | Related articles | Related reference work articles

Book review

O. Mahgoub, I.T. Kadim, E. Webb,Editors, ,Goat Meat Production and Quality (2012) CAB International,Wallingford (UK)/Cambridge (USA) 361 pp., Hardback, 180 US$, 95£, 125€, ISBN: 13:9781845938499. Gerhard Flachowsky Show preview | PDF (113 K) | Related articles | Related reference work articles

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VOLUME 56, PART 5, May 2012 Website

Research articles

Minireview

Targeting Persisters for Tuberculosis Control Ying Zhang, Wing Wai Yew, and Michael R. Barer Abstract Full Text PDF Figures

Mechanisms of Action: Physiological Effects

Ajoene, a Sulfur-Rich Molecule from Garlic, Inhibits Genes Controlled by Quorum Sensing Tim Holm Jakobsen, Maria van Gennip, Richard Kerry Phipps, Meenakshi Sundaram Shanmugham, Louise Dahl Christensen, Morten Alhede, Mette Eline Skindersoe, Thomas Bovbjerg Rasmussen, Karlheinz Friedrich, Friedrich Uthe, Peter Østrup Jensen, Claus Moser, Kristian Fog Nielsen, Leo Eberl, Thomas Ostenfeld Larsen, David Tanner, Niels Høiby, Thomas Bjarnsholt, and Michael Givskov Abstract Full Text PDF Figures Supplemental material

Antimicrobial Action and Cell Agglutination by the Eosinophil Cationic Protein Are Modulated by the Cell Wall Lipopolysaccharide Structure David Pulido, Mohammed Moussaoui, David Andreu, M. Victòria Nogués, Marc Torrent, and Ester Boix Abstract Full Text PDF Figures

Induction of Oxidative Stress in Trypanosoma brucei by the Antitrypanosomal Dihydroquinoline OSU-40 Shanshan He, Alex Dayton, Periannan Kuppusamy, Karl A. Werbovetz,and Mark E. Drew Abstract Full Text PDF Figures

Target- and Resistance-Based Mechanistic Studies with TP-434, a Novel Fluorocycline Antibiotic Trudy H. Grossman, Agata L. Starosta, Corey Fyfe, William O'Brien, David M. Rothstein, Aleksandra Mikolajka, Daniel N. Wilson, and Joyce A. Sutcliffe Abstract Full Text PDF Figures OPEN ACCESS ARTICLE

Efflux Pumps of Mycobacterium tuberculosis Play a Significant Role in Antituberculosis Activity of Potential Drug Candidates Meenakshi Balganesh, Neela Dinesh, Sreevalli Sharma, Sanjana Kuruppath, Anju V. Nair, and Umender Sharma Abstract Full Text PDF Figures Supplemental material

Novel N-Benzoyl-2-Hydroxybenzamide Disrupts Unique Parasite Secretory Pathway Alina Fomovska, Qingqing Huang, Kamal El Bissati, Ernest J. Mui, William H. Witola, Gang Cheng, Ying Zhou, Caroline Sommerville, Craig W. Roberts, Sam Bettis, Sean T. Prigge, Gustavo A. Afanador, Mark R. Hickman, Patty J. Lee, Susan E. Leed, Jennifer M. Auschwitz, Marco Pieroni, Jozef Stec, Stephen P. Muench, David W. Rice, Alan P. Kozikowski, and Rima McLeod Abstract Full Text PDF Figures Supplemental material

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Mechanisms of Resistance

Genetic and Biochemical Characterization of a Novel Metallo-β-Lactamase, TMB-1, from an Achromobacter xylosoxidans Strain Isolated in Tripoli, Libya Allaaeddin El Salabi, Pardha Saradhi Borra, Mark A. Toleman, Ørjan Samuelsen, and Timothy R. Walsh Abstract Full Text PDF Figures

Emergence of Proteus mirabilis Harboring blaKPC-2 and qnrD in a Chinese Hospital Yan-yan Hu, Jia-chang Cai, Rong Zhang, Hong-wei Zhou, Qian Sun, and Gong-xiang Chen Abstract Full Text PDF Figures

Saquinavir Inhibits the Malaria Parasite's Chloroquine Resistance Transporter Rowena E. Martin, Alice S. Butterworth, Donald L. Gardiner, Kiaran Kirk, James S. McCarthy, and Tina S. Skinner-Adams Abstract Full Text PDF Figures

Phytosphingosine-1-Phosphate Is a Signaling Molecule Involved in Miconazole Resistance in Sessile Candida albicans Cells Davy Vandenbosch, Anna Bink, Gilmer Govaert, Bruno P. A. Cammue, Hans J. Nelis, Karin Thevissen, and Tom Coenye Abstract Full Text PDF Figures Supplemental material

New Mutations in the Mycobacterial ATP Synthase: New Insights into the Binding of the Diarylquinoline TMC207 to the ATP Synthase C-Ring Structure Elena Segala, Wladimir Sougakoff, Aurelie Nevejans-Chauffour, Vincent Jarlier, and Stephanie Petrella AbstractFull Text PDF Figures

Fitness Cost and Interference of Arm/Rmt Aminoglycoside Resistance with the RsmF Housekeeping Methyltransferases Belen Gutierrez, Jose A. Escudero, Alvaro San Millan, Laura Hidalgo, Laura Carrilero, Cristina M. Ovejero, Alfonso Santos-Lopez, Daniel Thomas-Lopez, and Bruno Gonzalez- Zorn Abstract Full Text PDF Figures

Mycobacterium tuberculosis Population Structure Determines the Outcome of Genetics-Based Second-Line Drug Resistance Testing E. M. Streicher, I. Bergval, K. Dheda, E. C. Böttger, N. C. Gey van Pittius, M. Bosman, G. Coetzee, R. M. Anthony, P. D. van Helden, T. C. Victor, and R. M. Warren Abstract Full Text PDF Figures

MurAA Is Required for Intrinsic Cephalosporin Resistance of Enterococcus faecalis Dušanka Vesić and Christopher J. Kristich Abstract Full Text PDF Figures Supplemental material

Expression of the Resistance-Nodulation-Cell Division Pump AdeIJK in Acinetobacter baumannii Is Regulated by AdeN, a TetR-Type Regulator Nicolas Rosenfeld, Christiane Bouchier, Patrice Courvalin, and Bruno Périchon Abstract Full Text PDF Figures

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Lack of Association of the S769N Mutation in Plasmodium falciparum SERCA (PfATP6) with Resistance to Artemisinins Long Cui, Zenglei Wang, Hongying Jiang, Daniel Parker, Haiyan Wang, Xin-Zhuan Su, and Liwang Cui Abstract Full Text PDF Figures

The T788G Mutation in the cyp51C Gene Confers Voriconazole Resistance in Aspergillus flavus Causing Aspergillosis Wei Liu, Yi Sun, Wei Chen, Weixia Liu, Zhe Wan, Dingfang Bu, and Ruoyu Li Abstract Full Text PDF Figures

Integrating Conjugative Elements as Vectors of Antibiotic, Mercury, and Quaternary Ammonium Compound Resistance in Marine Aquaculture Environments Arturo Rodríguez-Blanco, Manuel L. Lemos, and Carlos R. Osorio Abstract Full Text PDF Figures

Crystal Structures of KPC-2 β-Lactamase in Complex with 3-Nitrophenyl Boronic Acid and the Penam Sulfone PSR-3-226 Wei Ke, Christopher R. Bethel, Krisztina M. Papp-Wallace, Sundar Ram Reddy Pagadala, Micheal Nottingham, Daniel Fernandez, John D. Buynak, Robert A. Bonomo, and Focco van den Akker Abstract Full Text PDF Figures

Diverse Sequence Types of Klebsiella pneumoniae Contribute to the Dissemination of blaNDM-1 in India, Sweden, and the United Kingdom Christian G. Giske, Inga Fröding, Chowdhury Mehedi Hasan, Agata Turlej-Rogacka, Mark Toleman, David Livermore, Neil Woodford, and Timothy R. Walsh Abstract Full Text PDF Figures rplC T460C Identified as a Dominant Mutation in Linezolid-Resistant Mycobacterium tuberculosis Strains Patrick Beckert, Doris Hillemann, Thomas A. Kohl, Jörn Kalinowski, Elvira Richter, Stefan Niemann, and Silke Feuerriegel Abstract Full Text PDF Supplemental material

Infrequent Finding of Metallo-β-Lactamase VIM-2 in Carbapenem-Resistant Pseudomonas aeruginosa Strains from Croatia Sanda Sardelic, Branka Bedenic, Céline Colinon-Dupuich, Stjepan Orhanovic, Zrinka Bosnjak, Vanda Plecko, Benoit Cournoyer, and Gian Maria Rossolini Abstract Full Text PDF Figures

The F423Y Mutation in the pfmdr2 Gene and Mutations N51I, C59R, and S108N in the pfdhfr Gene Are Independently Associated with Pyrimethamine Resistance in Plasmodium falciparum Isolates Sébastien Briolant, Hervé Bogreau, Marine Gil, Housem Bouchiba, Eric Baret, Rémy Amalvict, Christophe Rogier, and Bruno Pradines Abstract Full Text PDF Figures

No Decrease in Susceptibility to NVC-422 in Multiple-Passage Studies with Methicillin-Resistant Staphylococcus aureus, S. aureus, Pseudomonas aeruginosa, and Escherichia coli Louisa D'Lima, Lisa Friedman, Lu Wang, Ping Xu, Mark Anderson, and Dmitri Debabov Abstract Full Text PDF Figures

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Wild Coastline Birds as Reservoirs of Broad-Spectrum-β-Lactamase-Producing Enterobacteriaceae in Miami Beach, Florida Laurent Poirel, Anaïs Potron, Carolina De La Cuesta, Timothy Cleary, Patrice Nordmann, and L. Silvia Munoz-Price Abstract Full Text PDF

Highly Resistant Salmonella enterica Serovar Typhi with a Novel gyrA Mutation Raises Questions about the Long-Term Efficacy of Older Fluoroquinolones for Treating Typhoid Fever Kanika Deshpande Koirala, Duy Pham Thanh, Sudeep Dhoj Thapa, Amit Arjyal, Abhilasha Karkey, Sabina Dongol, Upendra Man Shrestha, Jeremy J. Farrar, Buddha Basnyat, and Stephen Baker Abstract Full Text PDF Figures OPEN ACCESS ARTICLE

Contribution of IncFII and Broad-Host IncA/C and IncN Plasmids to the Local Expansion and Diversification of Phylogroup B2 Escherichia coli ST131 Clones Carrying blaCTX-M-15 and qnrS1 Genes Ângela Novais, Diana Viana, Fernando Baquero, Javier Martínez-Botas, Rafael Cantón, and Teresa M. Coque Abstract Full Text PDF Figures

Genomewide Overexpression Screen for Fosfomycin Resistance in Escherichia coli: MurA Confers Clinical Resistance at Low Fitness Cost Alejandro Couce, Alejandra Briales, Alexandro Rodríguez-Rojas, Coloma Costas, Álvaro Pascual, and Jesús Blázquez Abstract Full Text PDF Figures blaNDM-1 Is a Chimera Likely Constructed in Acinetobacter baumannii M. A. Toleman, J. Spencer, L. Jones, and T. R. Walsh Abstract Full Text PDF Figures

Chromosomal Mutations Responsible for Fluoroquinolone Resistance in Ureaplasma Species in the United States Li Xiao, Donna M. Crabb, Lynn B. Duffy, Vanya Paralanov, John I. Glass, and Ken B. Waites Abstract Full Text PDF

Susceptibility

An Isoniazid Analogue Promotes Mycobacterium tuberculosis-Nanoparticle Interactions and Enhances Bacterial Killing by Macrophages Tatiany J. de Faria, Mariane Roman, Nicole M. de Souza, Rodrigo De Vecchi, João Vitor de Assis, Ana Lúcia Gomes dos Santos, Ivan H. Bechtold, Nathalie Winter, Maurilio José Soares, Luciano Paulino Silva, Mauro V. De Almeida, and André Báfica Abstract Full Text PDF Figures Supplemental material

Differential In Vivo Activities of Anidulafungin, Caspofungin, and Micafungin against Candida glabrata Isolates with and without FKS Resistance Mutations Maiken Cavling Arendrup, David S. Perlin, Rasmus Hare Jensen, Susan Julie Howard, Joanne Goodwin, and William Hope Abstract Full Text PDF Figures

Comparative In Vitro Activities of LFF571 against Clostridium difficile and 630 Other Intestinal Strains of Aerobic and Anaerobic Bacteria Diane M. Citron, Kerin L. Tyrrell, C. Vreni Merriam, and Ellie J. C. Goldstein Abstract Full Text PDF

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Epidemiological Cutoff Values for Azoles and Aspergillus fumigatus Based on a Novel Mathematical Approach Incorporating cyp51A Sequence Analysis J. Meletiadis, E. Mavridou, W. J. G. Melchers, J. W. Mouton, and P. E. Verweij Abstract Full Text PDF Figures

Evaluation of the Morphological Effects of TDT 067 (Terbinafine in Transfersome) and Conventional Terbinafine on Dermatophyte Hyphae In Vitro and In Vivo M. Ghannoum, N. Isham, W. Henry, H.-A. Kroon, and S. Yurdakul Abstract Full Text PDF Figures

Dynamic Interaction between Fluconazole and Amphotericin B against Cryptococcus gattii Julliana Ribeiro Alves Santos, Ludmila Ferreira Gouveia, Erika Linzi Silva Taylor, Maria Aparecida Resende-Stoianoff, Gerson Antônio Pianetti, Isabela Costa César, and Daniel Assis Santos Abstract Full Text PDF Figures

Species-Specific Antifungal Susceptibility Patterns of Scedosporium and Pseudallescheria Species Michaela Lackner, G. Sybren de Hoog, Paul E. Verweij, Mohammad J. Najafzadeh, Ilse Curfs- Breuker, Corné H. Klaassen, and Jacques F. Meis Abstract Full Text PDF Figures

In Vitro Activity of the New Fluoroketolide Solithromycin (CEM-101) against a Large Collection of Clinical Neisseria gonorrhoeae Isolates and International Reference Strains, Including Those with High-Level Antimicrobial Resistance: Potential Treatment Option for Gonorrhea? Daniel Golparian, Prabhavathi Fernandes, Makoto Ohnishi, Jörgen S. Jensen, and Magnus Unemo Abstract Full Text PDF Figures

Analytical Procedures

Expression Turnover Profiling To Monitor the Antifungal Activities of Amphotericin B, Voriconazole, and Micafungin against Aspergillus fumigatus Yanan Zhao, Padmaja Paderu, Steven Park, Aleksandra Dukhan, Meredith Senter, and David S. Perlin Abstract Full Text PDF Figures

Antiviral Agents

Standardized Comparison of the Relative Impacts of HIV-1 Reverse Transcriptase (RT) Mutations on Nucleoside RT Inhibitor Susceptibility George L. Melikian, Soo-Yon Rhee, Jonathan Taylor, W. Jeffrey Fessel, David Kaufman, William Towner, Paolo V. Troia-Cancio, Andrew Zolopa, Gregory K. Robbins, Ron Kagan, Dennis Israelski, and Robert W. Shafer Abstract Full Text PDF Figures Supplemental material OPEN ACCESS ARTICLE

Preclinical Evaluation of the HIV-1 Fusion Inhibitor L'644 as a Potential Candidate Microbicide Sarah Harman, Carolina Herrera, Naomi Armanasco, Jeremy Nuttall, and Robin J. Shattock Abstract Full Text PDF Figures

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Safety and Efficacy of GSK2248761, a Next-Generation Nonnucleoside Reverse Transcriptase Inhibitor, in Treatment-Naive HIV-1-Infected Subjects Carlos Zala, Marty St. Clair, Kathleen Dudas, Joseph Kim, Yu Lou, Scott White, Steve Piscitelli, Etienne Dumont, Keith Pietropaolo, Xiao-Jian Zhou, and Douglas Mayers Abstract Full Text PDF Figures

Anti-Human Immunodeficiency Virus Type 1 Activity of Novel 6-Substituted 1- Benzyl-3-(3,5-Dimethylbenzyl)Uracil Derivatives Paula Ordonez, Takayuki Hamasaki, Yohei Isono, Norikazu Sakakibara, Masahiro Ikejiri, Tokumi Maruyama, and Masanori Baba Abstract Full Text PDF Figures

Exploiting the Anti-HIV-1 Activity of Acyclovir: Suppression of Primary and Drug-Resistant HIV Isolates and Potentiation of the Activity by Ribavirin Christophe Vanpouille, Andrea Lisco, Andrea Introini, Jean-Charles Grivel, Arshi Munawwar, Melanie Merbah, Raymond F. Schinazi, Marco Derudas, Christopher McGuigan, Jan Balzarini, and Leonid Margolis Abstract Full Text PDF Figures

Effect of Natural Polymorphisms in the HIV-1 CRF02_AG Protease on Protease Inhibitor Hypersusceptibility André F. A. Santos, Denis M. Tebit, Matthew S. Lalonde, Ana B. Abecasis, Annette Ratcliff, Ricardo J. Camacho, Ricardo S. Diaz, Ottmar Herchenröder, Marcelo A. Soares, and Eric J. Arts Abstract Full Text PDF Figures Supplemental material

First Pharmacokinetic and Safety Study in Humans of the Novel Lipid Antiviral Conjugate CMX001, a Broad-Spectrum Oral Drug Active against Double- Stranded DNA Viruses Wendy Painter, Alice Robertson, Lawrence C. Trost, Susan Godkin, Bernhard Lampert, and George Painter Abstract Full Text PDF Figures

Epidemiology and Surveillance

Evolutionary Changes in Antimicrobial Resistance of Invasive Neisseria meningitidis Isolates in Belgium from 2000 to 2010: Increasing Prevalence of Penicillin Nonsusceptibility Sophie Bertrand, Françoise Carion, René Wintjens, Vanessa Mathys, and Raymond Vanhoof Abstract Full Text PDF Figures

Molecular Epidemiological Analysis of Escherichia coli Sequence Type ST131 (O25:H4) and blaCTX-M-15 among Extended-Spectrum-β-Lactamase-Producing E. coli from the United States, 2000 to 2009 James R. Johnson, Carl Urban, Scott J. Weissman, James H. Jorgensen, James S. Lewis II, Glen Hansen, Paul H. Edelstein, Ari Robicsek, Timothy Cleary, Javier Adachi, David Paterson, John Quinn, Nancy D. Hanson, Brian D. Johnston, Connie Clabots,Michael A. Kuskowski, and the AMERECUS Investigators Abstract Full Text PDF Figures

Microbiological Aetiology, Epidemiology, and Clinical Profile of Prosthetic Joint Infections: Are Current Antibiotic Prophylaxis Guidelines Effective? Trisha N. Peel, Allen C. Cheng, Kirsty L. Buising, and Peter F. M. Choong Abstract Full Text PDF

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Comparison of the Clinical Characteristics and Outcomes Associated with Vancomycin-Resistant Enterococcus faecalis and Vancomycin-Resistant E. faecium Bacteremia Kayoko Hayakawa, Dror Marchaim, Emily T. Martin, Namita Tiwari, Adnan Yousuf, Bharath Sunkara, Harish Pulluru, Harikrishna Kotra, Asma Hasan, Suchitha Bheemreddy, Puja Sheth, Dae-Won Lee, Srinivasa Kamatam, Pradeep Bathina, Priyanka Nanjireddy, Indu K. Chalana, Satyam Patel, Sarwan Kumar, Amit Vahia, Kimberly Ku, Victoria Yee, Jessie Swan, Jason M. Pogue, Paul R. Lephart, Michael J. Rybak, and Keith S. Kaye Abstract Full Text PDF

Antibiotic Exposure as a Risk Factor for Fluconazole-Resistant Candida Bloodstream Infection Ronen Ben-Ami, Keren Olshtain-Pops, Michal Krieger, Ilana Oren, Jihad Bishara, Michael Dan, Yonit Wiener-Well, Miriam Weinberger, Oren Zimhony, Michal Chowers, Gabriel Weber, Israel Potasman, Bibiana Chazan, Imad Kassis, Itamar Shalit, Colin Block, Nathan Keller, Dimitrios P. Kontoyiannis, Michael Giladi, and for the Israeli Candidemia Study Group Abstract Full Text PDF Figures

Molecular Characterization of Extended-Spectrum-β-Lactamase-Producing and Plasmid-Mediated AmpC β-Lactamase-Producing Escherichia coli Isolated from Stray Dogs in South Korea Migma Dorji Tamang, Hyang-Mi Nam, Geum-Chan Jang, Su-Ran Kim, Myung Hwa Chae, Suk- Chan Jung, Jae-Won Byun, Yong Ho Park, and Suk-Kyung Lim Abstract Full Text PDF Figures

Experimental Therapeutics

In Vitro and In Vivo Activities of Posaconazole and Amphotericin B in a Murine Invasive Infection by Mucor circinelloides: Poor Efficacy of Posaconazole Valentina Salas, F. Javier Pastor, Enrique Calvo, Eduardo Alvarez, Deanna A. Sutton, Emilio Mayayo, Anette W. Fothergill, Michael G. Rinaldi, and Josep Guarro Abstract Full Text PDF Figures

Sustained Release of the CCR5 Inhibitors CMPD167 and Maraviroc from Vaginal Rings in Rhesus Macaques R. Karl Malcolm, Ronald S. Veazey, Leslie Geer, Deborah Lowry, Susan M. Fetherston, Diarmaid J. Murphy, Peter Boyd, Ian Major, Robin J. Shattock, Per Johan Klasse, Lara A. Doyle, Kelsi K. Rasmussen, Laurie Goldman, Thomas J. Ketas, and John P. Moore Abstract Full Text PDF Figures Supplemental material

Efficacy of Posaconazole in Murine Experimental Sporotrichosis Fabiola Fernández-Silva, Javier Capilla, Emilio Mayayo, and Josep Guarro Abstract Full Text PDF Figures

Peroral Ciprofloxacin Therapy Impairs the Generation of a Protective Immune Response in a Mouse Model for Salmonella enterica Serovar Typhimurium Diarrhea, while Parenteral Ceftriaxone Therapy Does Not Kathrin Endt, Lisa Maier, Rina Käppeli, Manja Barthel, Benjamin Misselwitz, Marcus Kremer, and Wolf-Dietrich Hardt Abstract Full Text PDF Figures Supplemental material

Comparative In Vivo Efficacies of Epithelial Lining Fluid Exposures of Tedizolid, Linezolid, and Vancomycin for Methicillin-Resistant Staphylococcus aureus in a Mouse Pneumonia Model

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Pamela R. Tessier, Rebecca A. Keel, Mao Hagihara, Jared L. Crandon, and David P. Nicolau Abstract Full Text PDF Figures OPEN ACCESS ARTICLE

In Vitro Efficacy of Diallyl Sulfides against the Periodontopathogen Aggregatibacter actinomycetemcomitans Kabilan Velliyagounder, Krishnaraj Ganeshnarayan, Senthil Kumar Velusamy, and Daniel H. Fine Abstract Full Text PDF Figures

MK-4815, a Potential New Oral Agent for Treatment of Malaria Mary Ann Powles, John Allocco, Lai Yeung, Bakela Nare, Paul Liberator, and Dennis Schmatz Abstract Full Text PDF Figures

Three-Dimensional Human Skin Equivalent as a Tool To Study Acinetobacter baumannii Colonization Anna de Breij, Elisabeth M. Haisma, Marion Rietveld, Abdelouahab El Ghalbzouri, Peterhans J. van den Broek, Lenie Dijkshoorn, and Peter H. Nibbering Abstract Full Text PDF Figures

Daptomycin versus Vancomycin in a Methicillin-Resistant Staphylococcus aureus Endophthalmitis Rabbit Model: Bactericidal Effect, Safety, and Ocular Pharmacokinetics Sophie Lefèvre, Maher Saleh, Luc Marcellin, Audrey Subilia, Tristan Bourcier, Gilles Prévost, and François Jehl Abstract Full Text PDF Figures

Targeted Intracellular Delivery of Antituberculosis Drugs to Mycobacterium tuberculosis-Infected Macrophages via Functionalized Mesoporous Silica Nanoparticles Daniel L. Clemens, Bai-Yu Lee, Min Xue, Courtney R. Thomas, Huan Meng, Daniel Ferris, Andre E. Nel, Jeffrey I. Zink, and Marcus A. Horwitz Abstract Full Text PDF Figures

Daptomycin and Tigecycline Have Broader Effective Dose Ranges than Vancomycin as Prophylaxis against a Staphylococcus aureus Surgical Implant Infection in Mice Jared A. Niska, Jonathan H. Shahbazian, Romela Irene Ramos, Jonathan R. Pribaz, Fabrizio Billi, Kevin P. Francis, and Lloyd S. Miller Abstract Full Text PDF Figures

Pharmacokinetics of Sequential Doses of Capreomycin Powder for Inhalation in Guinea Pigs L. Garcia-Contreras, Pavan Muttil, John K. Fallon, Mohan Kabadi, Robert Gerety, and Anthony J. Hickey Abstract Full Text PDF Figures

Inhibition of Bacterial Biofilm Formation and Swarming Motility by a Small Synthetic Cationic Peptide César de la Fuente-Núñez, Victoria Korolik, Manjeet Bains, Uyen Nguyen, Elena B. M. Breidenstein, Shawn Horsman, Shawn Lewenza, Lori Burrows, and Robert E. W. Hancock Abstract Full Text PDF Figures Supplemental material

Broad-Spectrum β-Lactam Antibiotics for Treating Experimental Peritonitis in Mice Due to Klebsiella pneumoniae Producing the Carbapenemase OXA-48

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Olivier Mimoz, Nicolas Grégoire, Laurent Poirel, Manuella Marliat, William Couet, and Patrice Nordmann Abstract Full Text PDF

Clinical Therapeutics

CANVAS 1 and 2: Analysis of Clinical Response at Day 3 in Two Phase 3 Trials of Ceftaroline Fosamil versus Vancomycin plus Aztreonam in Treatment of Acute Bacterial Skin and Skin Structure Infections H. David Friedland, Tanya O'Neal, Donald Biek, Paul B. Eckburg, Douglas R. Rank, Lily Llorens, Alex Smith, Gary W. Witherell, Joseph B. Laudano, and Dirk Thye Abstract Full Text PDF Figures

Prospective, Observational Study of Voriconazole Therapeutic Drug Monitoring among Lung Transplant Recipients Receiving Prophylaxis: Factors Impacting Levels of and Associations between Serum Troughs, Efficacy, and Toxicity Dimitra Mitsani, M. Hong Nguyen, Ryan K. Shields, Yoshiya Toyoda, Eun J. Kwak, Fernanda P. Silveira, Joseph M. Pilewski, Maria M. Crespo, Christian Bermudez, Jay K. Bhama, and Cornelius J. Clancy Abstract Full Text PDF Figures

Incidence and Predictors of Nephrotoxicity Associated with Intravenous Colistin in Overweight and Obese Patients Timothy P. Gauthier, William R. Wolowich, Arathi Reddy, Ennie Cano, Lilian Abbo, and Laura B. Smith Abstract Full Text PDF Figures

No Effect of a Single Supratherapeutic Dose of Lersivirine, a Next-Generation Nonnucleoside Reverse Transcriptase Inhibitor, on Corrected QT Interval in Healthy Subjects Manoli Vourvahis, Rong Wang, Marie-Noella Ndongo, Melissa O'Gorman, and Margaret Tawadrous Abstract Full Text PDF Figures

Artemisinin-Naphthoquine Combination Therapy for Uncomplicated Pediatric Malaria: a Tolerability, Safety, and Preliminary Efficacy Study John Benjamin, Brioni Moore, Sook Ting Lee, Michèle Senn, Susan Griffin, Dulci Lautu, Sam Salman, Peter Siba, Ivo Mueller, and Timothy M. E. Davis Abstract Full Text PDF Figures

Artemisinin-Naphthoquine Combination Therapy for Uncomplicated Pediatric Malaria: a Pharmacokinetic Study Kevin T. Batty, Sam Salman, Brioni R. Moore, John Benjamin, Sook Ting Lee, Madhu Page- Sharp, Nolene Pitus, Kenneth F. Ilett, Ivo Mueller, Francis W. Hombhanje, Peter Siba, and Timothy M. E. Davis Abstract Full Text PDF Figures

Comparative Efficacies of Artemisinin Combination Therapies in Plasmodium falciparum Malaria and Polymorphism of pfATPase6, pfcrt, pfdhfr, and pfdhps Genes in Tea Gardens of Jalpaiguri District, India Pabitra Saha, Subhasish K. Guha, Sonali Das, Shrabanee Mullick, Swagata Ganguly, Asit Biswas, Dilip K. Bera, Gaurangadeb Chattopadhyay, Madhusudan Das, Pratip K. Kundu, Krishnangshu Ray, and Ardhendu K. Maji Abstract Full Text PDF Figures

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Microbiological Analysis of a Prospective, Randomized, Double-Blind Trial Comparing Moxifloxacin and Clindamycin in the Treatment of Odontogenic Infiltrates and Abscesses Ingo Sobottka, Karl Wegscheider, Ludwig Balzer, Rainer H. Böger, Olaf Hallier, Ina Giersdorf, Thomas Streichert, Munif Haddad, Ursula Platzer, and Georg Cachovan Abstract Full Text PDF

Efficacy of Human Simulated Exposures of Ceftaroline against Phenotypically Diverse Enterobacteriaceae Isolates Seth T. Housman, Rebecca A. Keel, Jared L. Crandon, Gregory Williams, and David P. Nicolau Abstract Full Text PDF Figures

Pharmacokinetics of Different Dosing Strategies of Oral Posaconazole in Patients with Compromised Gastrointestinal Function and Who Are at High Risk for Invasive Fungal Infection Oliver A. Cornely, David Helfgott, Amelia Langston, Werner Heinz, Jörg-Janne Vehreschild, Maria J. G. T. Vehreschild, Gopal Krishna, Lei Ma, Susan Huyck, and Michael C. McCarthy Abstract Full Text PDF Figures

Acyclovir Achieves a Lower Concentration in African HIV-Seronegative, Herpes Simplex Virus 2-Seropositive Women than in Non-African Populations Yanhui Lu, Connie Celum, Anna Wald, Jared M. Baeten, Frances Cowan, Sinead Delany- Moretlwe, Stewart E. Reid, James P. Hughes, Ellen Wilcox, Lawrence Corey, and Craig W. Hendrix Abstract Full Text PDF Figures

Pharmacology

Novel Modeling Framework To Guide Design of Optimal Dosing Strategies for β-Lactamase Inhibitors Pratik Bhagunde, Kai-Tai Chang, Elizabeth B. Hirsch, Kimberly R. Ledesma, Michael Nikolaou, and Vincent H. Tam Abstract Full Text PDF Figures

Pharmacokinetics of Rifampin in Peruvian Tuberculosis Patients with and without Comorbid Diabetes or HIV Ana Requena-Méndez, Geraint Davies, Alison Ardrey, Oswaldo Jave, Sonia L. López- Romero, Stephen A. Ward, and David A. J. Moore Abstract Full Text PDF Figures

Pulmonary Disposition of Tedizolid following Administration of Once-Daily Oral 200-Milligram Tedizolid Phosphate in Healthy Adult Volunteers Seth T. Housman, J. Samuel Pope, John Russomanno, Edward Salerno, Eric Shore, Joseph L. Kuti, and David P. Nicolau Abstract Full Text PDF Figures OPEN ACCESS ARTICLE

Therapeutic Equivalence Requires Pharmaceutical, Pharmacokinetic, and Pharmacodynamic Identities: True Bioequivalence of a Generic Product of Intravenous Metronidazole M. Agudelo and O. Vesga Abstract Full Text PDF Figures

In Vivo Pharmacokinetics/Pharmacodynamics of Colistin and Imipenem in Pseudomonas aeruginosa Biofilm Infection

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Wang Hengzhuang, Hong Wu, Oana Ciofu, Zhijun Song, and Niels Høiby Abstract Full Text PDF Figures Supplemental material

Evaluation of Ceftaroline Activity versus Ceftriaxone against Clinical Isolates of Streptococcus pneumoniae with Various Susceptibilities to Cephalosporins in an In Vitro Pharmacokinetic/Pharmacodynamic Model Molly E. Steed, Céline Vidaillac, Patricia Winterfield, Donald Biek, and Michael J. Rybak Abstract Full Text PDF Figures

Letters to the Editor

NDM-1-Producing Klebsiella pneumoniae Now in Turkey Laurent Poirel, Melda Özdamar, Alain A. Ocampo-Sosa, Salih Türkoglu, Ufuk Guney Ozer, and Patrice Nordmann Full Text PDF

First Carbapenem-Resistant Isolates of Acinetobacter soli in Japan Shiro Endo, Mina Sasano, Hisakazu Yano, Kazuaki Arai, Tetsuji Aoyagi, Masumitsu Hatta, Yoshiaki Gu, Mitsuhiro Yamada, Koichi Tokuda, Miho Ogawa, Masahiro Shimojima, Miho Kitagawa, Hiroyuki Kunishima, Yoichi Hirakata, and Mitsuo Kaku Full Text PDF

In Vivo Selection of Moxifloxacin-Resistant Clostridium difficile Ana Mena, Elena Riera, Carla López-Causapé, Irene Weber, José L. Pérez, and Antonio Oliver Full Text PDF

A Case of New Delhi Metallo-β-Lactamase 1 (NDM-1)-Producing Klebsiella pneumoniae with Putative Secondary Transmission from the Balkan Region in the Netherlands Teysir Halaby, Ascelijn E. Reuland, Nashwan al Naiemi, Anais Potron, Paul H. M. Savelkoul, Christina M. J. E. Vandenbroucke-Grauls, and Patrice Nordmann Full Text PDF

Clonal Dissemination of Linezolid-Resistant Staphylococcus haemolyticus Exhibiting the G2576T Mutation in the 23S rRNA Gene in a Tertiary Care Hospital in Brazil Lara M. de Almeida, Nilton Lincopan, Maria Rita E. de Araújo, and Elsa M. Mamizuka Full Text PDF

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VOLUME 56, PART 6, June 2012 Website

Research articles

Minireviews

Dosing Regimen Matters: the Importance of Early Intervention and Rapid Attainment of the Pharmacokinetic/Pharmacodynamic Target Marilyn N. Martinez, Mark G. Papich, and George L. Drusano Abstract Full Text PDF Figures

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Posaconazole Exposure-Response Relationship: Evaluating the Utility of Therapeutic Drug Monitoring Michael J. Dolton, John E. Ray, Deborah Marriott, and Andrew J. McLachlan Abstract Full Text PDF

Chemistry; Biosynthesis

Kinetic Analysis of Enterococcus faecium L,D-Transpeptidase Inactivation by Carbapenems Vincent Dubée, Michel Arthur, Hélène Fief, Sébastien Triboulet, Jean-Luc Mainardi, Laurent Gutmann, Matthieu Sollogoub, Louis B. Rice, Mélanie Ethève-Quelquejeu, and Jean- Emmanuel Hugonnet Abstract Full Text PDF Figures

Mechanisms of Action: Physiological Effects

A Potent Plant-Derived Antifungal Acetylenic Acid Mediates Its Activity by Interfering with Fatty Acid Homeostasis Tao Xu, Siddharth K. Tripathi, Qin Feng, Michael C. Lorenz, Marsha A. Wright, Melissa R. Jacob, Melanie M. Mask, Scott R. Baerson, Xing-Cong Li, Alice M. Clark, and Ameeta K. Agarwal Abstract Full Text PDF Figures Supplemental material

Effects of Dimerization on the Structure and Biological Activity of Antimicrobial Peptide Ctx-Ha E. N. Lorenzón, G. F. Cespedes, E. F. Vicente, L. G. Nogueira, T. M. Bauab, M. S. Castro, and E. M. Cilli Abstract Full Text PDF Figures

Further Insights into the Mode of Action of the Lipoglycopeptide Telavancin through Global Gene Expression Studies Yang Song, Christopher S. Lunde, Bret M. Benton, and Brian J. Wilkinson Abstract Full Text PDF Figures Supplemental material

The Aminoglycoside Antibiotic Kanamycin Damages DNA Bases in Escherichia coli: Caffeine Potentiates the DNA-Damaging Effects of Kanamycin while Suppressing Cell Killing by Ciprofloxacin in Escherichia coli and Bacillus anthracis Tina Manzhu Kang, Jessica Yuan, Angelyn Nguyen, Elinne Becket, Hanjing Yang, and Jeffrey H. Miller Abstract Full Text PDF Figures

Membrane-Active Action Mode of Polybia-CP, a Novel Antimicrobial Peptide Isolated from the Venom of Polybia paulista Kairong Wang, Jiexi Yan, Ru Chen, Wen Dang, Bangzhi Zhang, Wei Zhang, Jingjing Song, and Rui Wang Abstract Full Text PDF Figures

Mechanisms of Resistance

Molecular Characterization of Multidrug-Resistant Mycobacterium tuberculosis Isolated in Nepal Ajay Poudel, Chie Nakajima, Yukari Fukushima, Haruka Suzuki, Basu Dev Pandey, Bhagwan Maharjan, and Yasuhiko Suzuki Abstract Full Text PDF

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Class A Carbapenemase FPH-1 from Francisella philomiragia Marta Toth, Viktoria Vakulenko, Nuno T. Antunes, Hilary Frase, and Sergei B. Vakulenko Abstract Full Text PDF Figures

Involvement of the Lon Protease in the SOS Response Triggered by Ciprofloxacin in Pseudomonas aeruginosa PAO1 Elena B. M. Breidenstein, Manjeet Bains, and Robert E. W. Hancock Abstract Full Text PDF Figures Supplemental material

The Maltose ABC Transporter in Lactococcus lactis Facilitates High-Level Sensitivity to the Circular Bacteriocin Garvicin ML Christina Gabrielsen, Dag A. Brede, Pablo E. Hernández, Ingolf F. Nes, and Dzung B. Diep Abstract Full Text PDF Figures Supplemental material

Effect of Mutation and Genetic Background on Drug Resistance in Mycobacterium tuberculosis Lukas Fenner, Matthias Egger, Thomas Bodmer, Ekkehardt Altpeter, Marcel Zwahlen, Katia Jaton, Gaby E. Pfyffer, Sonia Borrell, Olivier Dubuis, Thomas Bruderer, Hans H. Siegrist, Hansjakob Furrer, Alexandra Calmy, Jan Fehr, Jesica Mazza Stalder, Béatrice Ninet, Erik C. Böttger, Sebastien Gagneux, and for the Swiss HIV Cohort Study and the Swiss Molecular Epidemiology of Tuberculosis Study Group Abstract Full Text PDF Figures Supplemental material

Attenuated Virulence and Biofilm Formation in Staphylococcus aureus following Sublethal Exposure to Triclosan Joe Latimer, Sarah Forbes, and Andrew J. McBain Abstract Full Text PDF Figures

Detection and Characterization of VIM-31, a New Variant of VIM-2 with Tyr224His and His252Arg Mutations, in a Clinical Isolate of Enterobacter cloacae Pierre Bogaerts, Carine Bebrone, Te-Din Huang, Warda Bouchahrouf, Yves DeGheldre, Ariane Deplano, Kurt Hoffmann, and Youri Glupczynski Abstract Full Text PDF Figures

Correlative Time-Resolved Fluorescence Microscopy To Assess Antibiotic Diffusion-Reaction in Biofilms S. Daddi Oubekka, R. Briandet, M.-P. Fontaine-Aupart, and K. Steenkeste Abstract Full Text PDF Figures Supplemental material

Dissemination of pCT-Like IncK Plasmids Harboring CTX-M-14 Extended- Spectrum β-Lactamase among Clinical Escherichia coli Isolates in the United Kingdom Hiran Dhanji, Parmina Khan, Jennifer L. Cottell, Laura J. V. Piddock, Jiancheng Zhang, David M. Livermore, and Neil Woodford Abstract Full Text PDF Figures

“tet(U)” Is Not a Tetracycline Resistance Determinant Jamie A. Caryl, Georgina Cox, Stefan Trimble, and Alex J. O'Neill Abstract Full Text PDF Figures

Functional Characterization of a Cassette-Specific Promoter in the Class 1 Integron-Associated qnrVC1 Gene Érica Lourenço da Fonseca and Ana Carolina Paulo Vicente

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Abstract Full Text PDF Figures

NDM-1-Producing Klebsiella pneumoniae Resistant to Colistin in a French Community Patient without History of Foreign Travel Corinne Arpin, Patrick Noury, Delphine Boraud, Laure Coulange, Alain Manetti, Catherine André, Fatima M'Zali, and Claudine Quentin Abstract Full Text PDF Figures

Susceptibility

In Vitro Antimalarial Activity and Drug Interactions of Fenofibric Acid Rina P. M. Wong and Timothy M. E. Davis Abstract Full Text PDF Figures

Carbapenem Therapy for Bacteremia Due to Extended-Spectrum-β-Lactamase- Producing Escherichia coli or Klebsiella pneumoniae: Implications of Ertapenem Susceptibility Nan-Yao Lee, Ching-Chi Lee, Wei-Han Huang, Ko-Chung Tsui, Po-Ren Hsueh, and Wen- Chien Ko Abstract Full Text PDF Figures

Antimicrobial-Resistant Strains of Clostridium difficile from North America Fred C. Tenover, Isabella A. Tickler, and David H. Persing Abstract Full Text PDF Figures

Summary of Ceftaroline Activity against Pathogens in the United States, 2010: Report from the Assessing Worldwide Antimicrobial Resistance Evaluation (AWARE) Surveillance Program Robert K. Flamm, Helio S. Sader, David J. Farrell, and Ronald N. Jones Abstract Full Text PDF OPEN ACCESS ARTICLE

The Relative Contributions of Physical Structure and Cell Density to the Antibiotic Susceptibility of Bacteria in Biofilms Amy E. Kirby, Kimberly Garner, and Bruce R. Levin Abstract Full Text PDF Figures

In Vitro Antimicrobial Susceptibility to Isepamicin of 6,296 Enterobacteriaceae Clinical Isolates Collected at a Tertiary Care University Hospital in Greece Sofia Maraki, George Samonis, Drosos E. Karageorgopoulos, Michael N. Mavros, Diamantis Kofteridis, and Matthew E. Falagas Abstract Full Text PDF Figures

In Vitro Activity of Telavancin in Combination with Colistin versus Gram- Negative Bacterial Pathogens Michael Hornsey, Christopher Longshaw, Lynette Phee, and David W. Wareham Abstract Full Text PDF Figures

The Combination of Doripenem and Colistin Is Bactericidal and Synergistic against Colistin-Resistant, Carbapenemase-Producing Klebsiella pneumoniae Meredith G. Jernigan, Ellen G. Press, M. Hong Nguyen, Cornelius J. Clancy, and Ryan K. Shields Abstract Full Text PDF Figures

Trends in Susceptibility of Vancomycin-Resistant Enterococcus faecium to Tigecycline, Daptomycin, and Linezolid and Molecular Epidemiology of the

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Isolates: Results from the Tigecycline In Vitro Surveillance in Taiwan (TIST) Study, 2006 to 2010 Hsih-Yeh Tsai, Chun-Hsing Liao, Yen-Hsu Chen, Po-Liang Lu, Cheng-Hua Huang, Chin-Te Lu, Yin-Ching Chuang, Shih-Ming Tsao, Yao-Shen Chen, Yung-Ching Liu, Wei-Yu Chen, Tsrang-Neng Jang, Hsiu-Chen Lin, Chih-Ming Chen, Zhi-Yuan Shi, Sung-Ching Pan, Jia-Ling Yang, Hsiang-Chi Kung, Chun-Eng Liu, Yu-Jen Cheng, Jien-Wei Liu, Wu Sun, Lih-Shinn Wang, Wen-Chien Ko, Kwok-Woon Yu, Ping-Cherng Chiang, Ming-Hsun Lee, Chun-Ming Lee, Gwo-Jong Hsu, and Po-Ren Hsueh Abstract Full Text PDF Figures

In Vitro Activities of Clindamycin, Imipenem, Metronidazole, and Piperacillin- Tazobactam against Susceptible and Resistant Isolates of Bacteroides fragilis Evaluated by Kill Kinetics Reiner Schaumann, Matthias Funke, Eva Janssen, and Arne C. Rodloff Abstract Full Text PDF Figures

Recurrent Episodes of Candidemia Due to Candida glabrata with a Mutation in Hot Spot 1 of the FKS2 Gene Developed after Prolonged Therapy with Caspofungin María Teresa Durán-Valle, Sara Gago, Alicia Gómez-López, Manuel Cuenca-Estrella, Leticia Jiménez Díez-Canseco, José Luis Gómez-Garcés, and Oscar Zaragoza Abstract Full Text PDF

Activity of a Novel Cyclic Lipopeptide, CB-183,315, against Resistant Clostridium difficile and Other Gram-Positive Aerobic and Anaerobic Intestinal Pathogens D. R. Snydman, N. V. Jacobus, and L. A. McDermott Abstract Full Text PDF

Biologic Response Modifiers

Quinolone-Induced Upregulation of Osteopontin Gene Promoter Activity in Human Lung Epithelial Cell Line A549 Beata Shiratori, Jing Zhang, Osamu Usami, Haorile Chagan-Yasutan, Yasuhiko Suzuki, Chie Nakajima, Toshimitsu Uede, and Toshio Hattori Abstract Full Text PDF Figures

Analytical Procedures

Scaling Adult Doses of Antifungal and Antibacterial Agents to Children Thomas H. Dawson Abstract Full Text PDF Figures

Rapid, Field-Deployable Method for Genotyping and Discovery of Single- Nucleotide Polymorphisms Associated with Drug Resistance in Plasmodium falciparum Rachel Daniels, Daouda Ndiaye, Mikeal Wall, Jason McKinney, Papa Diogoye Séne, Pardis C. Sabeti, Sarah K. Volkman, Souleymane Mboup, and Dyann F. Wirth Abstract Full Text PDF Figures

Preclinical Monitoring of Drug Association in Experimental Chemotherapy of Chagas' Disease by a New HPLC-UV Method Rodrigo Moreira da Silva, Líliam Teixeira Oliveira, Neila Márcia Silva Barcellos, Jacqueline de Souza, and Marta de Lana Abstract Full Text PDF Figures

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The Composition of the Culture Medium Influences the β-1,3-Glucan Metabolism of Aspergillus fumigatus and the Antifungal Activity of Inhibitors of β-1,3-Glucan Synthesis Cécile Clavaud, Anne Beauvais, Lise Barbin, Hélène Munier-Lehmann, and Jean-Paul Latgé Abstract Full Text PDF Figures Supplemental material

Antiviral Agents

Assessment of the Pharmacokinetic Interaction between Eltrombopag and Lopinavir-Ritonavir in Healthy Adult Subjects Mary B. Wire, Heidi B. McLean, Carolyn Pendry, Dickens Theodore, Jung W. Park, and Bin Peng Abstract Full Text PDF Figures

Broad Phenotypic Cross-Resistance to Elvitegravir in HIV-Infected Patients Failing on Raltegravir-Containing Regimens Carolina Garrido, Jorge Villacian, Natalia Zahonero, Theresa Pattery, Federico Garcia, Felix Gutierrez, Estrella Caballero, Margriet Van Houtte, Vincent Soriano, and Carmen de Mendoza Abstract Full Text PDF

Randomized Trial of Entecavir plus Adefovir in Patients with Lamivudine- Resistant Chronic Hepatitis B Who Show Suboptimal Response to Lamivudine plus Adefovir Young-Suk Lim, Ji-Young Lee, Danbi Lee, Ju Hyun Shim, Han Chu Lee, Yung Sang Lee, and Dong Jin Suh Abstract Full Text PDF Figures

Population Pharmacokinetic Analysis and Pharmacogenetics of Raltegravir in HIV-Positive and Healthy Individuals Mona Arab-Alameddine, Aurélie Fayet-Mello, Rubin Lubomirov, Michael Neely, Julia di Iulio, Andrew Owen, Marta Boffito, Matthias Cavassini, Huldrych F. Günthard, Katharina Rentsch, Thierry Buclin, Manel Aouri, Amalio Telenti, Laurent Arthur Decosterd, Margalida Rotger, Chantal Csajka, and the Swiss HIV Cohort Study Group Abstract Full Text PDF Figures Supplemental material

Characterization of UC781-Tenofovir Combination Gel Products for HIV-1 Infection Prevention in an Ex Vivo Ectocervical Model Marilyn Cost, Charlene S. Dezzutti, Meredith R. Clark, David R. Friend, Ayman Akil, and Lisa Cencia Rohan Abstract Full Text PDF Figures

Pharmacokinetics and Pharmacodynamics of Once-Daily versus Twice-Daily Raltegravir in Treatment-Naïve HIV-Infected Patients Matthew L. Rizk, Yaming Hang, Wen-Lin Luo, Jing Su, Jing Zhao, Havilland Campbell, Bach- Yen T. Nguyen, Peter Sklar, Joseph J. Eron Jr., and Larissa Wenning Abstract Full Text PDF Figures

L-Selectin and P-Selectin Are Novel Biomarkers of Cervicovaginal Inflammation for Preclinical Mucosal Safety Assessment of Anti-HIV-1 Microbicide Maohua Zhong, Benxia He, Jingyi Yang, Rong Bao, Yan Zhang, Dihan Zhou, Yaoqing Chen, Liangzhu Li, Chen Han, Yi Yang, Ying Sun, Yuan Cao, Yaoming Li, Wei Shi, Shibo Jiang, Xiaoyan Zhang, and Huimin Yan Abstract Full Text PDF Figures Supplemental material

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Antiviral Activity and In Vitro Mutation Development Pathways of MK-6186, a Novel Nonnucleoside Reverse Transcriptase Inhibitor Meiqing Lu, Peter J. Felock, Vandna Munshi, Renee C. Hrin, Ying-Jie Wang, Youwei Yan, Sanjeev Munshi, Georgia B. McGaughey, Robert Gomez, Neville J. Anthony, Theresa M. Williams, Jay A. Grobler, Daria J. Hazuda, Philip M. McKenna, Michael D. Miller, and Ming- Tain Lai Abstract Full Text PDF Figures

Sublimable C5A Delivery Provides Sustained and Prolonged Anti-HIV Microbicidal Activities Richard Maskiewicz, Michael Bobardt, Udayan Chatterji, Simi Gunaseelan, Charlene S. Dezzutti, Francois Penin, and Philippe A. Gallay Abstract Full Text PDF Figures

Genotype and Subtype Profiling of PSI-7977 as a Nucleotide Inhibitor of Hepatitis C Virus Angela M. Lam, Christine Espiritu, Shalini Bansal, Holly M. Micolochick Steuer, Congrong Niu, Veronique Zennou, Meg Keilman, Yuao Zhu, Shuiyun Lan, Michael J. Otto, and Phillip A. Furman Abstract Full Text PDF Figures Supplemental material

Effects of Rilpivirine on Human Adipocyte Differentiation, Gene Expression, and Release of Adipokines and Cytokines Julieta Díaz-Delfín, Pere Domingo, Maria Gracia Mateo, Maria del Mar Gutierrez, Joan Carles Domingo, Marta Giralt, and Francesc Villarroya Abstract Full Text PDF Figures

Development of a Robust Cytopathic Effect-Based High-Throughput Screening Assay To Identify Novel Inhibitors of Dengue Virus Kevin D. McCormick, Shufeng Liu, Jana L. Jacobs, Ernesto T. A. Marques Jr., Nicolas Sluis- Cremer, and Tianyi Wang Abstract Full Text PDF Figures Supplemental material

Epidemiology and Surveillance

Cryptococcus neoformans-Cryptococcus gattii Species Complex: an International Study of Wild-Type Susceptibility Endpoint Distributions and Epidemiological Cutoff Values for Amphotericin B and Flucytosine A. Espinel-Ingroff, A. Chowdhary, M. Cuenca-Estrella, A. Fothergill, J. Fuller, F. Hagen, N. Govender, J. Guarro, E. Johnson, C. Lass-Flörl, S. R. Lockhart, M. A. Martins, J. F. Meis, M. S. C. Melhem, L. Ostrosky-Zeichner, T. Pelaez, M. A. Pfaller, W. A. Schell, L. Trilles, S. Kidd, and J. Turnidge Abstract Full Text PDF

Carriage of an ACME II Variant May Have Contributed to Methicillin-Resistant Staphylococcus aureus Sequence Type 239-Like Strain Replacement in Liverpool Hospital, Sydney, Australia B. A. Espedido, J. A. Steen, T. Barbagiannakos, J. Mercer, D. L. Paterson, S. M. Grimmond, M. A. Cooper, I. B. Gosbell, S. J. van Hal, and S. O. Jensen Abstract Full Text PDF Figures

In Vitro Activity of Ceftaroline against Clinical Isolates of Streptococcus pneumoniae Recovered in 43 U.S. Medical Centers during 2010-2011

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Gary V. Doern, Daniel J. Diekema, Kristopher P. Heilmann, Cassie L. Dohrn, Fathollah Riahi, and Sandra S. Richter Abstract Full Text PDF

Prevalence of qnr, aac(6′)-Ib-cr, qepA, and oqxAB in Escherichia coli Isolates from Humans, Animals, and the Environment Xiang Chen, Weiqiu Zhang, Weijuan Pan, Jiajun Yin, Zhiming Pan, Song Gao, and Xinan Jiao Abstract Full Text PDF

Multiplex Real-Time PCR for Detection of an Epidemic KPC-Producing Klebsiella pneumoniae ST258 Clone Liang Chen, Kalyan D. Chavda, José R. Mediavilla, Yanan Zhao, Henry S. Fraimow, Stephen G. Jenkins, Michael H. Levi, Tao Hong, Albert D. Rojtman, Christine C. Ginocchio, Robert A. Bonomo, and Barry N. Kreiswirth Abstract Full Text PDF

Experimental Therapeutics

Action of Linezolid or Vancomycin on Biofilms in Ventriculoperitoneal Shunts In Vitro Roger Bayston, Gautham Ullas, and Waheed Ashraf Abstract Full Text PDF Figures OPEN ACCESS ARTICLE

Efficacy of Combined Therapy with Liposome-Encapsulated Meglumine Antimoniate and Allopurinol in Treatment of Canine Visceral Leishmaniasis Sydnei M. da Silva, Izabela F. G. Amorim, Raul R. Ribeiro, Erly G. Azevedo, Cynthia Demicheli, Maria N. Melo, Wagner L. Tafuri, Nelder F. Gontijo, Marilene S. M. Michalick, and Frédéric Frézard Abstract Full Text PDF Figures

Use of Carbapenems against Clinical, Nontyphoid Salmonella Isolates: Results from In Vitro and In Vivo Animal Studies Hung-Jen Tang, Chi-Chung Chen, Chun-Cheng Zhang, Kuo Chen Cheng, Shyh-Ren Chiang, Yu-Hsin Chiu, Yee Huang Ku, Wen-Chien Ko, and Yin-Ching Chuang Abstract Full Text PDF Figures

Inadequate Efficacy of a New Formulation of Fosmidomycin-Clindamycin Combination in Mozambican Children Less than Three Years Old with Uncomplicated Plasmodium falciparum Malaria Miguel Lanaspa, Cinta Moraleda, Sónia Machevo, Raquel González, Beatriz Serrano, Eusebio Macete, Pau Cisteró, Alfredo Mayor, David Hutchinson, Peter G. Kremsner, Pedro Alonso, Clara Menéndez, and Quique Bassat Abstract Full Text PDF Figures

Effect of Coadministration of Moxifloxacin and Rifampin on Mycobacterium tuberculosis in a Murine Aerosol Infection Model V. Balasubramanian, S. Solapure, S. Gaonkar, K. N. Mahesh Kumar, R. K. Shandil, Abhijeet Deshpande, Naveen Kumar, K. G. Vishwas, Vijender Panduga, Jitendar Reddy, Samit Ganguly, A. Louie, and G. L. Drusano Abstract Full Text PDF Figures

Sterilizing Activities of Novel Combinations Lacking First- and Second-Line Drugs in a Murine Model of Tuberculosis

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Kathy Williams, Austin Minkowski, Opokua Amoabeng, Charles A. Peloquin, Dinesh Taylor, Koen Andries, Robert S. Wallis, Khisimuzi E. Mdluli, and Eric L. Nuermberger Abstract Full Text PDF

Short-Term Therapy with Luliconazole, a Novel Topical Antifungal Imidazole, in Guinea Pig Models of Tinea Corporis and Tinea Pedis Hiroyasu Koga, Yasuko Nanjoh, Hideo Kaneda, Hideyo Yamaguchi, and Ryoji Tsuboi Abstract Full Text PDF Figures

Pharmacokinetic/Pharmacodynamic Predictors of Clinical Potency for Hepatitis C Virus Nonnucleoside Polymerase and Protease Inhibitors Micaela B. Reddy, Peter N. Morcos, Sophie Le Pogam, Ying Ou, Karl Frank, Thierry Lave, and Patrick Smith Abstract Full Text PDF Figures

Evaluation of a Mouse Model of Necrotic Granuloma Formation Using C3HeB/FeJ Mice for Testing of Drugs against Mycobacterium tuberculosis Emily R. Driver, Gavin J. Ryan, Donald R. Hoff, Scott M. Irwin, Randall J. Basaraba, Igor Kramnik, and Anne J. Lenaerts Abstract Full Text PDF Figures

Apicoplast-Targeting Antibacterials Inhibit the Growth of Babesia Parasites Mahmoud AbouLaila, Tserendorj Munkhjargal, Thillaiampalam Sivakumar, Akio Ueno, Yuki Nakano, Miki Yokoyama, Takeshi Yoshinari, Daisuke Nagano, Koji Katayama, Nasr El-Bahy, Naoaki Yokoyama, and Ikuo Igarashi Abstract Full Text PDF Figures Supplemental material

Antischistosomal Activities of Mefloquine-Related Arylmethanols Katrin Ingram, William Ellis, and Jennifer Keiser Abstract Full Text PDF Figures Supplemental material

The Aminopeptidase Inhibitor CHR-2863 Is an Orally Bioavailable Inhibitor of Murine Malaria Tina S. Skinner-Adams, Christopher L. Peatey, Karen Anderson, Katharine R. Trenholme, David Krige, Christopher L. Brown, Colin Stack, Desire M. M. Nsangou, Rency T. Mathews, Karine Thivierge, John P. Dalton, and Donald L. Gardiner Abstract Full Text PDF Figures

Pegylation of Antimicrobial Peptides Maintains the Active Peptide Conformation, Model Membrane Interactions, and Antimicrobial Activity while Improving Lung Tissue Biocompatibility following Airway Delivery Christopher J. Morris, Konrad Beck, Marc A. Fox, David Ulaeto, Graeme C. Clark, and Mark Gumbleton Abstract Full Text PDF Figures

Efficacy of OH-CATH30 and Its Analogs against Drug-Resistant Bacteria In Vitro and in Mouse Models Sheng-An Li, Wen-Hui Lee, and Yun Zhang Abstract Full Text PDF Figures

Meropenem-Clavulanic Acid Shows Activity against Mycobacterium tuberculosis In Vivo Kathleen England, Helena I. M. Boshoff, Kriti Arora, Danielle Weiner, Emmanuel Dayao, Daniel Schimel, Laura E. Via, and Clifton E. Barry III Abstract Full Text PDF Figures Supplemental material

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Activity of Oxacillin versus That of Vancomycin against Oxacillin-Susceptible mecA-Positive Staphylococcus aureus Clinical Isolates Evaluated by Population Analyses, Time-Kill Assays, and a Murine Thigh Infection Model Maria Labrou, George Michail, Eleni Ntokou, Theodore E. Pittaras, Spyros Pournaras, and Athanassios Tsakris Abstract Full Text PDF Figures

Efficacy of Ceftobiprole Medocaril against Enterococcus faecalis in a Murine Urinary Tract Infection Model Kavindra V. Singh and Barbara E. Murray Abstract Full Text PDF Figures

Clinical Therapeutics

Product Quality of Parenteral Vancomycin Products in the United States S. Nambiar, R. D. Madurawe, S. M. Zuk, S. R. Khan, C. D. Ellison, P. J. Faustino, D. J. Mans, M. L. Trehy, M. E. Hadwiger, M. T. Boyne II, K. Biswas, and E. M. Cox Abstract Full Text PDF Figures

Quality Assessment of U.S. Marketplace Vancomycin for Injection Products Using High-Resolution Liquid Chromatography-Mass Spectrometry and Potency Assays Michael E. Hadwiger, Cynthia D. Sommers, Daniel J. Mans, Vikram Patel, and Michael T. Boyne II Abstract Full Text PDF Figures

Association of ITPA Gene Polymorphisms and the Risk of Ribavirin-Induced Anemia in HIV/Hepatitis C Virus (HCV)-Coinfected Patients Receiving HCV Combination Therapy Pere Domingo, Josep M. Guardiola, Juliana Salazar, Ferran Torres, M. Gracia Mateo, Cristina Pacho, M. del Mar Gutierrez, Karuna Lamarca, Angels Fontanet, Jordi Martin, Jessica Muñoz, Francesc Vidal, and Montserrat Baiget Abstract Full Text PDF Figures

Phase II Dose-Ranging Trial of the Early Bactericidal Activity of PA-824 Andreas H. Diacon, Rodney Dawson, Jeannine du Bois, Kim Narunsky, Amour Venter, Peter R. Donald, Christo van Niekerk, Ngozi Erondu, Ann M. Ginsberg, Piet Becker, and Melvin K. Spigelman Abstract Full Text PDF Figures

Empirical Use of Ciprofloxacin for Acute Uncomplicated Pyelonephritis Caused by Escherichia coli in Communities Where the Prevalence of Fluoroquinolone Resistance Is High Jae Hyun Jeon, Kyuseok Kim, Woong Dae Han, Sang Hoon Song, Kyoung Un Park, Joong Eui Rhee, Kyoung-Ho Song, Wan Beom Park, Eu Suk Kim, Sang Won Park, Nam Joong Kim, Myoung-don Oh, and Hong Bin Kim Abstract Full Text PDF Figures

Influence of Antituberculosis Drug Resistance and Mycobacterium tuberculosis Lineage on Outcome in HIV-Associated Tuberculous Meningitis Dau Quang Tho, M. Estée Török, Nguyen Thi Bich Yen, Nguyen Duc Bang, Nguyen Thi Ngoc Lan, Vo Sy Kiet, Nguyen van Vinh Chau, Nguyen Huy Dung, Jeremy Day, Jeremy Farrar, Marcel Wolbers, and Maxine Caws Abstract Full Text PDF Figures

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Pharmacokinetics and Safety of Intravenous Ceftolozane-Tazobactam in Healthy Adult Subjects following Single and Multiple Ascending Doses Benjamin Miller, Ellie Hershberger, David Benziger, MyMy Trinh, and Ian Friedland Abstract Full Text PDF Figures

Safety and Tolerability of Voriconazole in Patients with Baseline Renal Insufficiency and Candidemia A. M. L. Oude Lashof, J. D. Sobel, M. Ruhnke, P. G. Pappas, C. Viscoli, H. T. Schlamm, J. H. Rex, and B. J. Kullberg Abstract Full Text PDF Figures

Pharmacokinetics of Ferroquine, a Novel 4-Aminoquinoline, in Asymptomatic Carriers of Plasmodium falciparum Infections Christian Supan, Ghyslain Mombo-Ngoma, Matthias P. Dal-Bianco, Carmen L. Ospina Salazar, Saadou Issifou, Florent Mazuir, Aziz Filali-Ansary, Christophe Biot, Daniel Ter- Minassian, Michael Ramharter, Peter G. Kremsner, and Bertrand Lell Abstract Full Text PDF Figures

Multidrug-Resistant Proteus mirabilis Bloodstream Infections: Risk Factors and Outcomes Mario Tumbarello, Enrico Maria Trecarichi, Barbara Fiori, Angela Raffaella Losito, Tiziana D'Inzeo, Lara Campana, Alberto Ruggeri, Eugenia Di Meco, Elvira Liberto, Giovanni Fadda, Roberto Cauda, and Teresa Spanu Abstract Full Text PDF Figures

Impact of Prior Inappropriate Fluconazole Dosing on Isolation of Fluconazole- Nonsusceptible Candida Species in Hospitalized Patients with Candidemia Dhara N. Shah, Raymond Yau, Todd M. Lasco, Jaye Weston, Miguel Salazar, Hannah R. Palmer, and Kevin W. Garey Abstract Full Text PDF Figures

Randomized Pilot Trial of Eight Weeks of Bedaquiline (TMC207) Treatment for Multidrug-Resistant Tuberculosis: Long-Term Outcome, Tolerability, and Effect on Emergence of Drug Resistance A. H. Diacon, P. R. Donald, A. Pym, M. Grobusch, R. F. Patientia, R. Mahanyele, N. Bantubani, R. Narasimooloo, T. De Marez, R. van Heeswijk, N. Lounis, P. Meyvisch, K. Andries, and D. F. McNeeley Abstract Full Text PDF Figures

Effects of Antibiotics on Shiga Toxin 2 Production and Bacteriophage Induction by Epidemic Escherichia coli O104:H4 Strain Martina Bielaszewska, Evgeny A. Idelevich, Wenlan Zhang, Andreas Bauwens, Frieder Schaumburg, Alexander Mellmann, Georg Peters, and Helge Karch Abstract Full Text PDF Figures

Stability of Extemporaneously Prepared 0.5-Percent Caspofungin Eye Drops: a Potential Cost-Savings Exercise Chin Fen Neoh, Jovan Jacob, Lok Leung, Jian Li, Angela Stathopoulos, Kay Stewart, and David C. M. Kong Abstract Full Text PDF Figures

Successful Long-Term Treatment of Cerebral Nocardiosis with Unexpectedly Low Doses of Linezolid in an Immunocompromised Patient Receiving Complex Polytherapy

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Federico Pea, Piergiorgio Cojutti, Alberto Pagotto, Francesco Cristini, Mario Furlanut, and Pierluigi Viale Abstract Full Text PDF Figures

Bactericidal Activity of Multiple Combinations of Tigecycline and Colistin against NDM-1-Producing Enterobacteriaceae Mahableshwar Albur, Alan Noel, Karen Bowker, and Alasdair MacGowan Abstract Full Text PDF Figures

Native Valve Endocarditis Caused by Corynebacterium striatum with Heterogeneous High-Level Daptomycin Resistance: Collateral Damage from Daptomycin Therapy? Truc T. Tran, Siraya Jaijakul, Cole T. Lewis, Lorena Diaz, Diana Panesso, Heidi B. Kaplan, Barbara E. Murray, Audrey Wanger, and Cesar A. Arias Abstract Full Text PDF Figures

Pharmacology

Effect of Milk Thistle on the Pharmacokinetics of Darunavir-Ritonavir in HIV- Infected Patients José Moltó, Marta Valle, Cristina Miranda, Samandhy Cedeño, Eugenia Negredo, and Bonaventura Clotet Abstract Full Text PDF Figures

Strand Length-Dependent Antimicrobial Activity and Membrane-Active Mechanism of Arginine- and Valine-Rich β-Hairpin-Like Antimicrobial Peptides Na Dong, Qingquan Ma, Anshan Shan, Yinfeng Lv, Wanning Hu, Yao Gu, and Yuzhi Li Abstract Full Text PDF Figures

Effect of HIV-1 Infection and Sex on the Cellular Pharmacology of the Antiretroviral Drugs Zidovudine and Lamivudine Joseph E. Rower, Amie Meditz, Edward M. Gardner, Kenneth Lichtenstein, Julie Predhomme, Lane R. Bushman, Brandon Klein, Jia-Hua Zheng, Samantha MaWhinney, and Peter L. Anderson Abstract Full Text PDF Figures

Divalent Metals and pH Alter Raltegravir Disposition In Vitro Darren M. Moss, Marco Siccardi, Matthew Murphy, Michael M. Piperakis, Saye H. Khoo, David J. Back, and Andrew Owen Abstract Full Text PDF Figures

Integrated Population Pharmacokinetic Analysis of Voriconazole in Children, Adolescents, and Adults Lena E. Friberg, Patanjali Ravva, Mats O. Karlsson, and Ping Liu Abstract Full Text PDF Figures

Evaluation of Standard- and High-Dose Daptomycin versus Linezolid against Vancomycin-Resistant Enterococcus Isolates in an In Vitro Pharmacokinetic/Pharmacodynamic Model with Simulated Endocardial Vegetations Ashley D. Hall, Molly E. Steed, Cesar A. Arias, Barbara E. Murray, and Michael J. Rybak Abstract Full Text PDF Figures

Reduced Antituberculosis Drug Concentrations in HIV-Infected Patients Who Are Men or Have Low Weight: Implications for International Dosing Guidelines

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Helen McIlleron, Roxana Rustomjee, Mahnaz Vahedi, Thuli Mthiyane, Paolo Denti, Catherine Connolly, Wasima Rida, Alexander Pym, Peter J. Smith, and Philip C. Onyebujoh Abstract Full Text PDF Figures

In Vitro Interactions between Aspirin and Amphotericin B against Planktonic Cells and Biofilm Cells of Candida albicans and C. parapsilosis Yabin Zhou, Ganggang Wang, Yutang Li, Yang Liu, Yu Song, Wenshuai Zheng, Ning Zhang, Xiaoyan Hu, Shikun Yan, and Jihui Jia Abstract Full Text PDF Figures

In Vitro Cardiovascular Effects of Dihydroartemisin-Piperaquine Combination Compared with Other Antimalarials Franco Borsini, William Crumb, Silvia Pace, David Ubben, Barb Wible, Gan-Xin Yan, and Christian Funck-Brentano Abstract Full Text PDF Figures

Pharmacokinetic Comparison of Two Piperaquine-Containing Artemisinin Combination Therapies in Papua New Guinean Children with Uncomplicated Malaria Sam Salman, Madhu Page-Sharp, Kevin T. Batty, Kaye Kose, Susan Griffin, Peter M. Siba, Kenneth F. Ilett, Ivo Mueller, and Timothy M. E. Davis Abstract Full Text PDF Figures

Pharmacokinetics and Pulmonary Disposition of Tedizolid and Linezolid in a Murine Pneumonia Model under Variable Conditions Rebecca A. Keel, Jared L. Crandon, and David P. Nicolau Abstract Full Text PDF Figures OPEN ACCESS ARTICLE

Impact of Two-Component Regulatory Systems PhoP-PhoQ and PmrA-PmrB on Colistin Pharmacodynamics in Pseudomonas aeruginosa Neang S. Ly, Jenny Yang, Jurgen B. Bulitta, and Brian T. Tsuji Abstract Full Text PDF Figures

Letters to the Editor

Characterization of Multidrug-Resistant Salmonella enterica Serovar Heidelberg from a Ground Turkey-Associated Outbreak in the United States in 2011 Jason P. Folster, G. Pecic, R. Rickert, J. Taylor, S. Zhao, P. J. Fedorka-Cray, J. Whichard, and P. McDermott Full Text PDF

Proveblue (Methylene Blue) as an Antimalarial Agent: In Vitro Synergy with Dihydroartemisinin and Atorvastatin Jérôme Dormoi, Aurélie Pascual, Sébastien Briolant, Rémy Amalvict, Serge Charras, Eric Baret, Emilie Huyghues des Etages, Michel Feraud, and Bruno Pradines Full Text PDF Figures

Continuation of High-Dose Vancomycin despite Nephrotoxicity Christine B. Teng, Katayoun Rezai, Gail S. Itokazu, Renee C. Xamplas, Robert C. Glowacki, Keith A. Rodvold, Robert A. Weinstein, and David N. Schwartz Full Text PDF

Reply to “Continuation of High-Dose Vancomycin despite Nephrotoxicity” John A. Bosso

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Full Text PDF

Erratum

Incidence and Predictors of Nephrotoxicity Associated with Intravenous Colistin in Overweight and Obese Patients Timothy P. Gauthier, William R. Wolowich, Arathi Reddy, Ennie Cano, Lilian Abbo, and Laura B. Smith Full Text PDF

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VOLUME 78, PART 9, MAY 2012 Website

Research articles

Biodegradation

Glyoxylate Metabolism Is a Key Feature of the Metabolic Degradation of 1,4- Dioxane by Pseudonocardia dioxanivorans Strain CB1190 Ariel Grostern, Christopher M. Sales, Wei-Qin Zhuang, Onur Erbilgin, and Lisa Alvarez- Cohen Abstract Full Text PDF Figures Supplemental material

Biodegradation of Trichloroethylene by an Endophyte of Hybrid Poplar Jun Won Kang, Zareen Khan, and Sharon L. Doty Abstract Full Text PDF Figures

Biotechnology

Functional Cell Surface Display and Controlled Secretion of Diverse Agarolytic Enzymes by Escherichia coli with a Novel Ligation-Independent Cloning Vector Based on the Autotransporter YfaL Hyeok-Jin Ko, Eunhye Park, Joseph Song, Taek Ho Yang, Hee Jong Lee, Kyoung Heon Kim, and In-Geol Choi Abstract Full Text PDF Figures Supplemental material

Rearrangement of Gene Order in the phaCAB Operon Leads to Effective Production of Ultrahigh-Molecular-Weight Poly[(R)-3-Hydroxybutyrate] in Genetically Engineered Escherichia coli Ayaka Hiroe, Kenji Tsuge, Christopher T. Nomura, Mitsuhiro Itaya, and Takeharu Tsuge Abstract Full Text PDF Figures

Versatile Transformation System That Is Applicable to both Multiple Transgene Expression and Gene Targeting for Thraustochytrids Keishi Sakaguchi, Takanori Matsuda, Takumi Kobayashi, Jun-ichiro Ohara, Rie Hamaguchi, Eriko Abe, Naoki Nagano, Masahiro Hayashi, Mayumi Ueda, Daiske Honda, Yuji Okita, Yousuke Taoka, Shinichi Sugimoto, Nozomu Okino, and Makoto Ito Abstract Full Text PDF Figures Supplemental material

Self-Assembled Amyloid-Like Oligomeric-Cohesin Scaffoldin for Augmented Protein Display on the Saccharomyces cerevisiae Cell Surface Zhenlin Han, Bei Zhang, Yi E. Wang, Yi Y. Zuo, and Wei Wen Su Abstract Full Text PDF Figures

Employing a Recombinant Strain of Advenella mimigardefordensis for Biotechnical Production of Homopolythioesters from 3,3′-Dithiodipropionic Acid Yongzhen Xia, Jan Hendrik Wübbeler, Qingsheng Qi, and Alexander Steinbüchel Abstract Full Text PDF Figures Supplemental material

Toward Homosuccinate Fermentation: Metabolic Engineering of Corynebacterium glutamicum for Anaerobic Production of Succinate from Glucose and Formate

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Boris Litsanov, Melanie Brocker, and Michael Bott Abstract Full Text PDF Figures Supplemental material

Selection of a Bifidobacterium animalis subsp. lactis Strain with a Decreased Ability To Produce Acetic Acid Abelardo Margolles and Borja Sánchez Abstract Full Text PDF Figures

Induction of Holomycin Production and Complex Metabolic Changes by the argR Mutation in Streptomyces clavuligerus NP1 Hua Yin, Sihai Xiang, Jianting Zheng, Keqiang Fan, Tingting Yu, Xu Yang, Yanfeng Peng, Haibin Wang, Deqin Feng, Yuanming Luo, Hua Bai, and Keqian Yang Abstract Full Text PDF Figures

Lytic Activity of LysH5 Endolysin Secreted by Lactococcus lactis Using the Secretion Signal Sequence of Bacteriocin Lcn972 Lorena Rodríguez-Rubio, Dolores Gutiérrez, Beatriz Martínez, Ana Rodríguez, and Pilar García Abstract Full Text PDF Figures Supplemental material

Relative Catalytic Efficiency of ldhL- and ldhD-Encoded Products Is Crucial for Optical Purity of Lactic Acid Produced by Lactobacillus Strains Zhaojuan Zheng, Binbin Sheng, Cuiqing Ma, Haiwei Zhang, Chao Gao, Fei Su, and Ping Xu Abstract Full Text PDF Figures Supplemental material

Environmental Microbiology

Neurotoxin Gene Profiling of Clostridium botulinum Types C and D Native to Different Countries within Europe Cedric Woudstra, Hanna Skarin, Fabrizio Anniballi, Lucia Fenicia, Luca Bano, Ilenia Drigo, Miriam Koene, Marie-Hélène Bäyon-Auboyer, Jean-Philippe Buffereau, Dario De Medici, and Patrick Fach Abstract Full Text PDF Figures Supplemental material

Characterization of Bioaerosols from Dairy Barns: Reconstructing the Puzzle of Occupational Respiratory Diseases by Using Molecular Approaches Pascale Blais Lecours, Marc Veillette, David Marsolais, and Caroline Duchaine Abstract Full Text PDF Figures

Moraxella Species Are Primarily Responsible for Generating Malodor in Laundry Hiromi Kubota, Asako Mitani, Yu Niwano, Kohei Takeuchi, Atsushi Tanaka, Noriko Yamaguchi, Yoshiaki Kawamura, and Jun Hitomi Abstract Full Text PDF Figures Supplemental material

Concentration of Norovirus during Wastewater Treatment and Its Impact on Oyster Contamination John Flannery, Sinéad Keaveney, Paulina Rajko-Nenow, Vincent O'Flaherty, and William Doré Abstract Full Text PDF Figures Reprints and Permissions

Use of a Coculture To Enable Current Production by Geobacter sulfurreducens Youpeng Qu, Yujie Feng, Xin Wang, and Bruce E. Logan Abstract Full Text PDF Figures

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Importance of Micromonospora spp. as Colonizers of Cellulose in Freshwater Lakes as Demonstrated by Quantitative Reverse Transcriptase PCR of 16S rRNA Alexandre B. de Menezes, James E. McDonald, Heather E. Allison, and Alan J. McCarthy Abstract Full Text PDF Figures

Enzymology and Protein Engineering

The N-Terminal β-Sheet of the Hyperthermophilic Endoglucanase from Pyrococcus horikoshii Is Critical for Thermostability Trent C. Yang, Steve Legault, Emery A. Kayiranga, Jyothi Kumaran, Kazuhiko Ishikawa, and Wing L. Sung Abstract Full Text PDF Figures

Molecular Determinants of the Cofactor Specificity of Ribitol Dehydrogenase, a Short-Chain Dehydrogenase/Reductase Hee-Jung Moon, Manish Kumar Tiwari, Ranjitha Singh, Yun Chan Kang, and Jung-Kul Lee Abstract Full Text PDF Figures

Purification and Characterization of a Novel Subtype A3 Botulinum Neurotoxin William H. Tepp, Guangyun Lin, and Eric A. Johnson Abstract Full Text PDF Figures

Thermus thermophilus Nucleoside Phosphorylases Active in the Synthesis of Nucleoside Analogues Marcos Almendros, José Berenguer, and Jose-Vicente Sinisterra Abstract Full Text PDF Figures

Improved Thermostability of Clostridium thermocellum Endoglucanase Cel8A by Using Consensus-Guided Mutagenesis Michael Anbar, Ozgur Gul, Raphael Lamed, Ugur O. Sezerman, and Edward A. Bayer Abstract Full Text PDF Figures

Evolutionary and Genomic Microbiology

Ecological Success of a Group of Saccharomyces cerevisiae/Saccharomyces kudriavzevii Hybrids in the Northern European Wine-Making Environment C. Erny, P. Raoult, A. Alais, G. Butterlin, P. Delobel, F. Matei-Radoi, S. Casaregola, and J. L. Legras Abstract Full Text PDF Figures Supplemental material

Transcriptome Mapping of pAR060302, a blaCMY-2-Positive Broad-Host-Range IncA/C Plasmid Kevin S. Lang, Jessica L. Danzeisen, Wayne Xu, and Timothy J. Johnson Abstract Full Text PDF Figures

Sialic Acid Catabolism and Transport Gene Clusters Are Lineage Specific in Vibrio vulnificus Jean-Bernard Lubin, Joseph J. Kingston, Nityananda Chowdhury, and E. Fidelma Boyd Abstract Full Text PDF Figures

Increased Competitive Fitness of Bacillus subtilis under Nonsporulating Conditions via Inactivation of Pleiotropic Regulators AlsR, SigD, and SigW Wayne L. Nicholson Abstract Full Text PDF Figures

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Food Microbiology

Efficacy of Biocides Used in the Modern Food Industry To Control Salmonella enterica, and Links between Biocide Tolerance and Resistance to Clinically Relevant Antimicrobial Compounds Orla Condell, Carol Iversen, Shane Cooney, Karen A. Power, Ciara Walsh, Catherine Burgess, and Séamus Fanning Abstract Full Text PDF Figures

Isolation of a Paenibacillus sp. Strain and Structural Elucidation of Its Broad- Spectrum Lipopeptide Antibiotic Yaoqi Guo, En Huang, Chunhua Yuan, Liwen Zhang, and Ahmed E. Yousef Abstract Full Text PDF Figures Supplemental material

Growth of Aerobic Ripening Bacteria at the Cheese Surface Is Limited by the Availability of Iron Christophe Monnet, Alexandre Back, and Françoise Irlinger Abstract Full Text PDF Supplemental material

Emergence and Stability of High-Pressure Resistance in Different Food-Borne Pathogens Dietrich Vanlint, Nele Rutten, Chris W. Michiels, and Abram Aertsen Abstract Full Text PDF Figures

Effect of Lactose Monolaurate on Pathogenic and Nonpathogenic Bacteria Ashwini Wagh, Shujie Shen, Fen Ann Shen, Charles D. Miller, and Marie K. Walsh Abstract Full Text PDF Figures

Genetics and Molecular Biology

D-Xylose Concentration-Dependent Hydrolase Expression Profiles and the Function of CreA and XlnR in Aspergillus niger Astrid R. Mach-Aigner, Jimmy Omony, Birgit Jovanovic, Anton J. B. van Boxtel, and Leo H. de Graaff Abstract Full Text PDF Figures

Identification of Avian Pathogenic Escherichia coli Genes That Are Induced In Vivo during Infection in Chickens Huruma Nelwike Tuntufye, Sarah Lebeer, Paul Simon Gwakisa, and Bruno Maria Goddeeris Abstract Full Text PDF Figures

Establishment of a Tractable Genetic Transformation System in Veillonella spp. Jinman Liu, Zhoujie Xie, Justin Merritt, and Fengxia Qi Abstract Full Text PDF Figures

Identification of Potential Type III Secretion Proteins via Heterologous Expression of Vibrio parahaemolyticus DNA Xiaohui Zhou, Seth D. Nydam, Jeffrey E. Christensen, Michael E. Konkel, Lisa Orfe, Patrick Friel, and Douglas R. Call Abstract Full Text PDF Figures

Invertebrate Microbiology

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Corals Form Characteristic Associations with Symbiotic Nitrogen-Fixing Bacteria Kimberley A. Lema, Bette L. Willis, and David G. Bourne Abstract Full Text PDF Figures Supplemental material

Detection of Two Zoonotic Babesia microti Lineages, the Hobetsu and U.S. Lineages, in Two Sympatric Tick Species, Ixodes ovatus and Ixodes persulcatus, Respectively, in Japan Aya Zamoto-Niikura, Masayoshi Tsuji, Wei Qiang, Minoru Nakao, Haruyuki Hirata, and Chiaki Ishihara Abstract Full Text PDF Figures

Methods

New Complementation Constructs for Inducible and Constitutive Gene Expression in Neisseria gonorrhoeae and Neisseria meningitidis Meghan E. Ramsey, Kathleen T. Hackett, Chaitra Kotha, and Joseph P. Dillard Abstract Full Text PDF Figures

Genome Scanning for Conditionally Essential Genes in Salmonella enterica Serotype Typhimurium Anita Khatiwara, Tieshan Jiang, Sam-Sun Sung, Turki Dawoud, Jeong Nam Kim, Dhruva Bhattacharya, Hee-Bal Kim, Steven C. Ricke, and Young Min KwonAbstract Full Text PDF Figures Supplemental material

Fusion of a Novel Genetically Engineered Chitosan Affinity Protein and Green Fluorescent Protein for Specific Detection of Chitosan In Vitro and In Situ Malathi Nampally, Bruno Maria Moerschbacher, and Stephan Kolkenbrock Abstract Full Text PDF Figures Supplemental material

One-Step Triplex High-Resolution Melting Analysis for Rapid Identification and Simultaneous Subtyping of Frequently Isolated Salmonella Serovars Josef Zeinzinger, Ariane T. Pietzka, Anna Stöger, Christian Kornschober, Renate Kunert, Franz Allerberger, Robert Mach, and Werner Ruppitsch Abstract Full Text PDF Figures

Scaling Down the Analysis of Environmental Processes: Monitoring Enzyme Activity in Natural Substrates on a Millimeter Resolution Scale Petr Baldrian and,Tomáš Větrovský Abstract Full Text PDF Figures Supplemental material

Characterization of Bacterial Polysaccharide Capsules and Detection in the Presence of Deliquescent Water by Atomic Force Microscopy Hai-Nan Su, Zhi-Hua Chen, Sheng-Bo Liu, Li-Ping Qiao, Xiu-Lan Chen, Hai-Lun He, Xian Zhao, Bai-Cheng Zhou, and Yu-Zhong Zhang Abstract Full Text PDF Figures Supplemental material

Microbial Ecology

Microbial Scout Hypothesis, Stochastic Exit from Dormancy, and the Nature of Slow Growers S. Buerger, A. Spoering, E. Gavrish, C. Leslin, L. Ling, and S. S. Epstein Abstract Full Text PDF Figures

Microbial Scout Hypothesis and Microbial Discovery

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S. Buerger, A. Spoering, E. Gavrish, C. Leslin, L. Ling, and S. S. Epstein Abstract Full Text PDF Figures

Microbial Functioning and Community Structure Variability in the Mesopelagic and Epipelagic Waters of the Subtropical Northeast Atlantic Ocean Federico Baltar, Javier Arístegui, Josep M. Gasol, and Gerhard J. Herndl Abstract Full Text PDF Figures

Distribution Patterns and Phylogeny of Marine Stramenopiles in the North Pacific Ocean Yun-Chi Lin, Tracy Campbell, Chih-Ching Chung, Gwo-Ching Gong, Kuo-Ping Chiang, and Alexandra Z. Worden Abstract Full Text PDF Figures Supplemental material

Aceticlastic and NaCl-Requiring Methanogen “Methanosaeta pelagica” sp. nov., Isolated from Marine Tidal Flat Sediment Koji Mori, Takao Iino, Ken-Ichiro Suzuki, Kaoru Yamaguchi, and Yoichi Kamagata Abstract Full Text PDF Figures

Mycology

Nonribosomal Peptide Synthetase Genes pesL and pes1 Are Essential for Fumigaclavine C Production in Aspergillus fumigatus Karen A. O'Hanlon, Lorna Gallagher, Markus Schrettl, Christoph Jöchl, Kevin Kavanagh, Thomas O. Larsen, and Sean Doyle Abstract Full Text PDF Figures Supplemental material

Physiology

Dimethyl Sulfoxide and Ethanol Elicit Increased Amyloid Biogenesis and Amyloid-Integrated Biofilm Formation in Escherichia coli Ji Youn Lim, Janine M. May, and Lynette Cegelski Abstract Full Text PDF Figures Supplemental material

Complex Physiology and Compound Stress Responses during Fermentation of Alkali-Pretreated Corn Stover Hydrolysate by an Escherichia coli Ethanologen Michael S. Schwalbach, David H. Keating, Mary Tremaine, Wesley D. Marner, Yaoping Zhang, William Bothfeld, Alan Higbee, Jeffrey A. Grass, Cameron Cotten, Jennifer L. Reed, Leonardo da Costa Sousa, Mingjie Jin, Venkatesh Balan, James Ellinger, Bruce Dale, Patricia J. Kiley, and Robert Landick Abstract Full Text PDF Figures Supplemental material OPEN ACCESS ARTICLE

Plant Microbiology

Irrigation Differentially Impacts Populations of Indigenous Antibiotic-Producing Pseudomonas spp. in the Rhizosphere of Wheat Olga V. Mavrodi, Dmitri V. Mavrodi, James A. Parejko, Linda S. Thomashow, and David M. Weller Abstract Full Text PDF Figures

Housekeeping Gene Sequencing and Multilocus Variable-Number Tandem- Repeat Analysis To Identify Subpopulations within Pseudomonas syringae pv. maculicola and Pseudomonas syringae pv. tomato That Correlate with Host Specificity

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S. Gironde and C. Manceau Abstract Full Text PDF Figures Supplemental material

Public Health Microbiology

Removal and Transfer of Viruses on Food Contact Surfaces by Cleaning Cloths Kristen E. Gibson, Philip G. Crandall, and Steven C. Ricke Abstract Full Text PDF Figures

Leptospire Genomic Diversity Revealed by Microarray-Based Comparative Genomic Hybridization Broderick Eribo, Sirima Mingmongkolchai, Tingfen Yan, Padunsri Dubbs, and Karen E. Nelson Abstract Full Text PDF Figures Supplemental material

Detection of a Common and Persistent tet(L)-Carrying Plasmid in Chicken- Waste-Impacted Farm Soil Yaqi You, Markus Hilpert, and Mandy J. Ward Abstract Full Text PDF Figures

Composting for Avian Influenza Virus Elimination Josefine Elving, Eva Emmoth,Ann Albihn, Björn Vinnerås, and Jakob Ottoson Abstract Full Text PDF Figures

Variation in Stress Resistance Patterns among stx Genotypes and Genetic Lineages of Shiga Toxin-Producing Escherichia coli O157 Ken-ichi Lee, Nigel P. French, Geoff Jones, Yukiko Hara-Kudo, Sunao Iyoda, Hideki Kobayashi, Yoshiko Sugita-Konishi, Hirokazu Tsubone, and Susumu Kumagai Abstract Full Text PDF Figures Supplemental material

Impact of Xynthia Tempest on Viral Contamination of Shellfish Marco Grodzki, Joanna Ollivier, Jean-Claude Le Saux, Jean-Côme Piquet, Mathilde Noyer, and Françoise S. Le Guyader Abstract Full Text PDF Figures

Authors' Corrections

Identification of New Single Nucleotide Polymorphism-Based Markers for Inter- and Intraspecies Discrimination of Obligate Bacterial Parasites (Pasteuria spp.) of Invertebrates Tim H. Mauchline, Rachel Knox, Sharad Mohan, Stephen J. Powers, Brian R. Kerry, Keith G. Davies, and Penny R. Hirsch Full Text PDF

Evidence of Two Functionally Distinct Ornithine Decarboxylation Systems in Lactic Acid Bacteria Andrea Romano, Hein Trip, Niels L. Mulder, Aline Lonvaud-Funel, Juke S. Lolkema, and Patrick M. Lucas Full Text PDF

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VOLUME 78, PART 10, MAY 2012 Website

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Research articles

Minireviews

Properties and Biological Role of Streptococcal Fratricins Kari Helene Berg, Truls Johan Biørnstad, Ola Johnsborg, and Leiv Sigve Håvarstein Abstract Full Text PDF Figures

Biodegradation

Heterologous Expression of Polycyclic Aromatic Hydrocarbon Ring- Hydroxylating Dioxygenase Genes from a Novel Pyrene-Degrading Betaproteobacterium David R. Singleton, Jing Hu, and Michael D. Aitken Abstract Full Text PDF Figures Supplemental material

Key Enzymes Enabling the Growth of Arthrobacter sp. Strain JBH1 with Nitroglycerin as the Sole Source of Carbon and Nitrogen Johana Husserl, Joseph B. Hughes, and Jim C. Spain Abstract Full Text PDF Figures Supplemental material

Transcriptional Response of the Cellobiose Dehydrogenase Gene to Cello- and Xylooligosaccharides in the Basidiomycete Phanerochaete chrysosporium Chiaki Hori, Hitoshi Suzuki, Kiyohiko Igarashi, and Masahiro Samejima Abstract Full Text PDF Figures

Biotechnology

Remarkable Ability of Pandoraea pnomenusa B356 Biphenyl Dioxygenase To Metabolize Simple Flavonoids Thi Thanh My Pham, Youbin Tu, and Michel Sylvestre Abstract Full Text PDF Figures

Development of an Engineered Bioluminescent Reporter Phage for Detection of Bacterial Blight of Crucifers David A. Schofield, Carolee T. Bull, Isael Rubio, W. Patrick Wechter, Caroline Westwater, and Ian J. Molineux Abstract Full Text PDF Figures

Cloning, Overexpression in Escherichia coli, and Characterization of a Thermostable Fungal Acetylxylan Esterase from Talaromyces emersonii Deborah M. Waters, Patrick G. Murray, Yuta Miki, Angel T. Martínez, Maria G. Tuohy, and Craig B. Faulds Abstract Full Text PDF Figures

Environmental Microbiology

Impact of Nutritional Factors on the Proteome of Intestinal Escherichia coli: Induction of OxyR-Dependent Proteins AhpF and Dps by a Lactose-Rich Diet Monique Rothe, Carl Alpert, Wolfram Engst, Stephanie Musiol, Gunnar Loh, and Michael Blaut Abstract Full Text PDF Figures Supplemental material

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Longitudinal Poisson Regression To Evaluate the Epidemiology of Cryptosporidium, Giardia, and Fecal Indicator Bacteria in Coastal California Wetlands Jennifer N. Hogan, Miles E. Daniels, Fred G. Watson, Patricia A. Conrad, Stori C. Oates, Melissa A. Miller, Dane Hardin, Barbara A. Byrne, Clare Dominik, Ann Melli, David A. Jessup, and Woutrina A. Miller Abstract Full Text PDF Figures

Silver(I), Mercury(II), Cadmium(II), and Zinc(II) Target Exposed Enzymic Iron- Sulfur Clusters when They Toxify Escherichia coli Fang Fang Xu and James A. Imlay Abstract Full Text PDF Figures

Central Role of Dynamic Tidal Biofilms Dominated by Aerobic Hydrocarbonoclastic Bacteria and Diatoms in the Biodegradation of Hydrocarbons in Coastal Mudflats Frédéric Coulon, Panagiota-Myrsini Chronopoulou, Anne Fahy, Sandrine Païssé, Marisol Goñi-Urriza, Louis Peperzak, Laura Acuña Alvarez, Boyd A. McKew, Corina P. D. Brussaard, Graham J. C. Underwood, Kenneth N. Timmis, Robert Duran, and Terry J. McGenity Abstract Full Text PDF Figures Supplemental material

Density of the Waterborne Parasite Ceratomyxa shasta and Its Biological Effects on Salmon Sascha L. Hallett, R. Adam Ray, Charlene N. Hurst, Richard A. Holt, Gerri R. Buckles, Stephen D. Atkinson, and Jerri L. Bartholomew Abstract Full Text PDF Figures Supplemental material

Natural Product Biosynthetic Gene Diversity in Geographically Distinct Soil Microbiomes Boojala Vijay B. Reddy, Dimitris Kallifidas, Jeffrey H. Kim, Zachary Charlop-Powers, Zhiyang Feng, and Sean F. Brady Abstract Full Text PDF Figures Supplemental material

Isolation of Potentially Novel Brucella spp. from Frogs Tobias Eisenberg, Hans-Peter Hamann, Ute Kaim, Karen Schlez, Helga Seeger, Nicole Schauerte, Falk Melzer, Herbert Tomaso, Holger C. Scholz, Mark S. Koylass, Adrian M. Whatmore, and Michael Zschöck Abstract Full Text PDF Figures

Food Microbiology

Characterization of the Intracellular Glutamate Decarboxylase System: Analysis of Its Function, Transcription, and Role in the Acid Resistance of Various Strains of Listeria monocytogenes Kimon-Andreas G. Karatzas, Laura Suur, and Conor P. O'Byrne Abstract Full Text PDF Figures Supplemental material

Genomic Sequence of Bacteriophage ATCC 8074-B1 and Activity of Its Endolysin and Engineered Variants against Clostridium sporogenes Melinda J. Mayer, Michael J. Gasson, and Arjan Narbad Abstract Full Text PDF Figures Supplemental material

Psychrotolerant Paenibacillus tundrae Isolates from Barley Grains Produce New Cereulide-Like Depsipeptides (Paenilide and Homopaenilide) That Are Highly Toxic to Mammalian Cells

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Stiina Rasimus, Raimo Mikkola, Maria A. Andersson, Vera V. Teplova, Natalia Venediktova, Christine Ek-Kommonen, and Mirja Salkinoja-Salonen Abstract Full Text PDF Figures

Detection of Human Food-Borne and Zoonotic Viruses on Irrigated, Field- Grown Strawberries Julie Brassard, Marie-Josée Gagné, Mylène Généreux, and Caroline Côté Abstract Full Text PDF Figures Supplemental material

Genetics and Molecular Biology

Genetic Analysis of the Upper Phenylacetate Catabolic Pathway in the Production of Tropodithietic Acid by Phaeobacter gallaeciensis Martine Berger, Nelson L. Brock, Heiko Liesegang, Marco Dogs, Ines Preuth, Meinhard Simon, Jeroen S. Dickschat, and Thorsten Brinkhoff Abstract Full Text PDF Figures Supplemental material

Functional Robustness of a Polycyclic Aromatic Hydrocarbon Metabolic Network Examined in a nidA Aromatic Ring-Hydroxylating Oxygenase Mutant of Mycobacterium vanbaalenii PYR-1 Seong-Jae Kim, Jaekyeong Song, Ohgew Kweon, Ricky D. Holland, Dae-Wi Kim, Jongnam Kim, Li-Rong Yu, and Carl E. Cerniglia Abstract Full Text PDF Figures Supplemental material

Geomicrobiology

Quantitative Fluorescence In Situ Hybridization Analysis of Microbial Consortia from a Biogenic Gas Field in Alaska's Cook Inlet Basin Katherine S. Dawson, Dariusz Strąpoć, Brad Huizinga, Ulrika Lidstrom, Matt Ashby, and Jennifer L. Macalady Abstract Full Text PDF Figures Supplemental material

Invertebrate Microbiology

Role of the Lizard Teira dugesii as a Potential Host for Ixodes ricinus Tick-Borne Pathogens R. De Sousa, I. Lopes de Carvalho, A. S. Santos, C. Bernardes, N. Milhano, J. Jesus, D. Menezes, and M. S. Núncio Abstract Full Text PDF Figures

Methods

Metagenomic Analysis of Streptomyces lividans Reveals Host-Dependent Functional Expression Matthew D. McMahon, Changhui Guan, Jo Handelsman, and Michael G. Thomas Abstract Full Text PDF Figures

Cytoplasmic pH Response to Acid Stress in Individual Cells of Escherichia coli and Bacillus subtilis Observed by Fluorescence Ratio Imaging Microscopy Keith A. Martinez II, Ryan D. Kitko, J. Patrick Mershon, Haley E. Adcox, Kotiba A. Malek, Melanie B. Berkmen, and Joan L. Slonczewski Abstract Full Text PDF Figures

Markerless Gene Deletion System for Sphingomonads Andreas Kaczmarczyk, Julia A. Vorholt, and Anne Francez-Charlot

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Abstract Full Text PDF Figures Supplemental material

Microbial Ecology

Analysis of Structure and Composition of Bacterial Core Communities in Mature Drinking Water Biofilms and Bulk Water of a Citywide Network in Germany Karsten Henne, Leila Kahlisch, Ingrid Brettar, and Manfred G. Höfle Abstract Full Text PDF Figures Supplemental material

Mycology

Intraradical Dynamics of Two Coexisting Isolates of the Arbuscular Mycorrhizal Fungus Glomus intraradices Sensu Lato as Estimated by Real-Time PCR of Mitochondrial DNA Karol Krak, Martina Janoušková, Petra Caklová, Miroslav Vosátka, and Helena Štorchová Abstract Full Text PDF Figures Supplemental material

Functional Analysis of the Degradation of Cellulosic Substrates by a Chaetomium globosum Endophytic Isolate Paolo Longoni, Marinella Rodolfi, Laura Pantaleoni, Enrico Doria, Lorenzo Concia, Anna Maria Picco, and Rino Cella Abstract Full Text PDF Figures Supplemental material

Plant Microbiology

Metabolome and Transcriptome of the Interaction between Ustilago maydis and Fusarium verticillioides In Vitro Wilfried Jonkers, Alma E. Rodriguez Estrada, Keunsub Lee, Andrew Breakspear, Georgiana May, and H. Corby Kistler Abstract Full Text PDF Figures Supplemental material

A Pseudomonas viridiflava-Related Bacterium Causes a Dark-Reddish Spot Disease in Glycine max Ana J. González, Ana M. Fernández, Mateo San José, Germán González-Varela, and M. Rosario Rodicio Abstract Full Text PDF Figures

Public Health Microbiology

Evidence of Host-Associated Populations of Cryptosporidium parvum in Italy Rosanna Drumo, Giovanni Widmer, Liam J. Morrison, Andy Tait, Vincenzo Grelloni, Nicoletta D'Avino, Edoardo Pozio, and Simone M. Cacciò Abstract Full Text PDF Figures Supplemental material OPEN ACCESS ARTICLE

Characterization of Extended-Spectrum β-Lactamase Genes Found among Escherichia coli Isolates from Duck and Environmental Samples Obtained on a Duck Farm Junying Ma, Jian-Hua Liu, Luchao Lv, Zhiyong Zong, Yan Sun, Hongqing Zheng, ZhangLiu Chen, and Zhen-Ling Zeng Abstract Full Text PDF Figures

Molecular Epidemiology of Brucella abortus Isolates from Cattle, Elk, and Bison in the United States, 1998 to 2011

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James Higgins, Tod Stuber, Christine Quance, William H. Edwards, Rebekah V. Tiller, Tom Linfield, Jack Rhyan, Angela Berte, and Beth Harris Abstract Full Text PDF Figures Supplemental material

Influence of Seasonality on the Genetic Diversity of Vibrio parahaemolyticus in New Hampshire Shellfish Waters as Determined by Multilocus Sequence Analysis Crystal N. Ellis, Brian M. Schuster, Megan J. Striplin, Stephen H. Jones, Cheryl A. Whistler, and Vaughn S. Cooper Abstract Full Text PDF Figures Supplemental material

Erratum

Transcriptional Responses of Escherichia coli K-12 and O157:H7 Associated with Lettuce Leaves Ryan C. Fink, Elaine P. Black, Zhe Hou, Masayuki Sugawara, Michael J. Sadowsky, and Francisco Diez-Gonzalez Full Text PDF

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VOLUME 78, PART 11, JUNE 2012 Website

Research articles

Biotechnology

Direct Conversion of Xylan to Ethanol by Recombinant Saccharomyces cerevisiae Strains Displaying an Engineered Minihemicellulosome Jie Sun, Fei Wen, Tong Si, Jian-He Xu, and Huimin Zhao Abstract Full Text PDF Figures Supplemental material

Role of Aspergillus niger acrA in Arsenic Resistance and Its Use as the Basis for an Arsenic Biosensor Se-In Choe, Fabrice N. Gravelat, Qusai Al Abdallah, Mark J. Lee, Bernard F. Gibbs, and Donald C. Sheppard Abstract Full Text PDF Figures Supplemental material

Production of L-Ribose from L-Ribulose by a Triple-Site Variant of Mannose-6- Phosphate Isomerase from Geobacillus thermodenitrificans Yu-Ri Lim, Soo-Jin Yeom, and Deok-Kun Oh Abstract Full Text PDF Figures

Environmental Microbiology

Indole-3-Glycerol-Phosphate Synthase Is Recognized by a Cold-Inducible Group II Chaperonin in Thermococcus kodakarensis Le Gao, Atsushi Danno, Sayaka Fujii, Wakao Fukuda, Tadayuki Imanaka, and Shinsuke Fujiwara Abstract Full Text PDF Figures

Impacts of Hematite Nanoparticle Exposure on Biomechanical, Adhesive, and Surface Electrical Properties of Escherichia coli Cells Wen Zhang, Joseph Hughes, and Yongsheng Chen

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Abstract Full Text PDF Figures Supplemental material

Persistence of Nasal Colonization with Livestock-Associated Methicillin- Resistant Staphylococcus aureus in Pig Farmers after Holidays from Pig Exposure Robin Köck, Bea Loth, Mahir Köksal, Josef Schulte-Wülwer, Jürgen Harlizius, and Alexander W. Friedrich Abstract Full Text PDF

Selected Antimicrobial Essential Oils Eradicate Pseudomonas spp. and Staphylococcus aureus Biofilms Nicole L. Kavanaugh and Katharina Ribbeck Abstract Full Text PDF Figures

Enzymology and Protein Engineering

Intramolecular Regulation of the Sequence-Specific mRNA Interferase Activity of MazF Fused to a MazE Fragment with a Linker Cleavable by Specific Proteases Jung-Ho Park, Yoshihiro Yamaguchi, and Masayori Inouye Abstract Full Text PDF Figures

Modular Glucuronoxylan-Specific Xylanase with a Family CBM35 Carbohydrate- Binding Module Susana Valeria Valenzuela, Pilar Diaz, and F. I. Javier Pastor Abstract Full Text PDF Figures Supplemental material

Iodide Oxidation by a Novel Multicopper Oxidase from the Alphaproteobacterium Strain Q-1 Mio Suzuki, Yoshifumi Eda, Shiaki Ohsawa, Yu Kanesaki, Hirofumi Yoshikawa, Kan Tanaka, Yasuyuki Muramatsu, Jun Yoshikawa, Ikuo Sato, Takaaki Fujii, and Seigo Amachi Abstract Full Text PDF Figures Supplemental material

Food Microbiology

Listeria monocytogenes Grown at 7°C Shows Reduced Acid Survival and an Altered Transcriptional Response to Acid Shock Compared to L. monocytogenes Grown at 37°C R. A. Ivy, M. Wiedmann, and K. J. Boor Abstract Full Text PDF Figures Supplemental material

Genetic Analysis of the Cronobacter sakazakii O4 to O7 O-Antigen Gene Clusters and Development of a PCR Assay for Identification of All C. sakazakii O Serotypes Yamin Sun, Min Wang, Quan Wang, Boyang Cao, Xin He, Kun Li, Lu Feng, and Lei Wang Abstract Full Text PDF Figures Supplemental material

Polymorphisms in rpoS and Stress Tolerance Heterogeneity in Natural Isolates of Cronobacter sakazakii Avelino Álvarez-Ordóñez, Máire Begley, and Colin Hill Abstract Full Text PDF Figures Supplemental material

Role of Extracellular Transaldolase from Bifidobacterium bifidum in Mucin Adhesion and Aggregation

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Irene González-Rodríguez, Borja Sánchez, Lorena Ruiz, Francesca Turroni, Marco Ventura, Patricia Ruas-Madiedo, Miguel Gueimonde, and Abelardo Margolles Abstract Full Text PDF Figures

A Loss-of-Function Mutation in the PAS Kinase Rim15p Is Related to Defective Quiescence Entry and High Fermentation Rates of Saccharomyces cerevisiae Sake Yeast Strains Daisuke Watanabe, Yuya Araki, Yan Zhou, Naoki Maeya, Takeshi Akao, and Hitoshi Shimoi Abstract Full Text PDF Figures Supplemental material

Presence and Persistence of Salmonella enterica Serotype Typhimurium in the Phyllosphere and Rhizosphere of Spray-Irrigated Parsley Guy Kisluk and Sima Yaron Abstract Full Text PDF Figures

Impact of Respiration on Resistance of Lactobacillus plantarum WCFS1 to Acid Stress Masayuki Watanabe, Stijn van der Veen, and Tjakko Abee Abstract Full Text PDF Figures

Geomicrobiology

Denitrification and Nitrogen Fixation Dynamics in the Area Surrounding an Individual Ghost Shrimp (Neotrypaea californiensis) Burrow System Victoria J. Bertics, Jill A. Sohm, Cara Magnabosco, and Wiebke Ziebis Abstract Full Text PDF Figures

Influence of Substrate Mineralogy on Bacterial Mineralization of Calcium Carbonate: Implications for Stone Conservation Carlos Rodriguez-Navarro, Fadwa Jroundi, Mara Schiro, Encarnación Ruiz-Agudo, and María Teresa González-Muñoz Abstract Full Text PDF Figures

Invertebrate Microbiology

Phospholipase A2 Inhibitors Synthesized by Two Entomopathogenic Bacteria, Xenorhabdus nematophila and Photorhabdus temperata subsp. temperata Samyeol Seo, Sunghong Lee, Yongpyo Hong, and Yonggyun Kim Abstract Full Text PDF Figures

Specific Binding of Radiolabeled Cry1Fa Insecticidal Protein from Bacillus thuringiensis to Midgut Sites in Lepidopteran Species Carmen Sara Hernández-Rodríguez, Patricia Hernández-Martínez, Jeroen Van Rie, Baltasar Escriche, and Juan Ferré Abstract Full Text PDF Figures Supplemental material

Methods

New Range of Vectors with a Stringent 5-Fluoroorotic Acid-Based Counterselection System for Generating Mutants by Allelic Replacement in Staphylococcus aureus Peter Redder and Patrick Linder Abstract Full Text PDF Figures Supplemental material

Microbial Ecology

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Zoonotic Agents in Small Ruminants Kept on City Farms in Southern Germany Anna-Katarina Schilling, Helmut Hotzel, Ulrich Methner, Lisa D. Sprague, Gernot Schmoock, Hosny El-Adawy, Ralf Ehricht, Anna-Caroline Wöhr, Michael Erhard, and Lutz Geue Abstract Full Text PDF Supplemental material

Apparent Loss of Vibrio vulnificus from North Carolina Oysters Coincides with a Drought-Induced Increase in Salinity Brett A. Froelich, Tiffany C. Williams, Rachel T. Noble, and James D. Oliver Abstract Full Text PDF Figures

Biofilm Growth and Near-Infrared Radiation-Driven Photosynthesis of the Chlorophyll d-Containing Cyanobacterium Acaryochloris marina Lars Behrendt, Verena Schrameyer, Klaus Qvortrup, Luisa Lundin, Søren J. Sørensen, Anthony W. D. Larkum, and Michael Kühl Abstract Full Text PDF Figures

Soil Fungal Cellobiohydrolase I Gene (cbhI) Composition and Expression in a Loblolly Pine Plantation under Conditions of Elevated Atmospheric CO2 and Nitrogen Fertilization Carolyn F. Weber, Monica Moya Balasch, Zachary Gossage, Andrea Porras-Alfaro, and Cheryl R. Kuske Abstract Full Text PDF Figures Supplemental material

Comparative Analysis of Eukaryotic Marine Microbial Assemblages from 18S rRNA Gene and Gene Transcript Clone Libraries by Using Different Methods of Extraction Amy Koid, William C. Nelson, Amy Mraz, and Karla B. Heidelberg Abstract Full Text PDF Figures Supplemental material

Community Structure Analysis of Methanogens Associated with Rumen Protozoa Reveals Bias in Universal Archaeal Primers Lisa D. Tymensen and Tim A. McAllister Abstract Full Text PDF Figures

Mycology

Novel Phakopsora pachyrhizi Extracellular Proteins Are Ideal Targets for Immunological Diagnostic Assays Douglas G. Luster, Michael B. McMahon, H. Herb Edwards, Britney L. Boerma, Melanie L. Lewis Ivey, Sally A. Miller, and Anne E. Dorrance Abstract Full Text PDF Figures Supplemental material

Real-Time PCR Detection of Phaeomoniella chlamydospora and Phaeoacremonium aleophilum Maria Teresa Martín, Rebeca Cobos, Laura Martín, and Lorena López-Enríquez Abstract Full Text PDF Supplemental material

Transcriptional and Enzymatic Profiling of Pleurotus ostreatus Laccase Genes in Submerged and Solid-State Fermentation Cultures Raúl Castanera, Gúmer Pérez, Alejandra Omarini, Manuel Alfaro, Antonio G. Pisabarro, Vincenza Faraco, Antonella Amore, and Lucía Ramírez Abstract Full Text PDF Figures Supplemental material

Public Health Microbiology

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Feasibility of Quantitative Environmental Surveillance in Poliovirus Eradication Strategies W. J. Lodder, A. M. Buisman, S. A. Rutjes, J. C. Heijne, P. F. Teunis, and A. M. de Roda Husman Abstract Full Text PDF Figures

Antimicrobial Resistance in Escherichia coli Isolates from Raccoons (Procyon lotor) in Southern Ontario, Canada Claire M. Jardine, Nicol Janecko, Mike Allan, Patrick Boerlin, Gabhan Chalmers, Gosia Kozak, Scott A. McEwen, and Richard J. Reid-Smith Abstract Full Text PDF

New Sequence Types and Multidrug Resistance among Pathogenic Escherichia coli Isolates from Coastal Marine Sediments C. Vignaroli, G. M. Luna, C. Rinaldi, A. Di Cesare, R. Danovaro, and F. Biavasco Abstract Full Text PDF Figures Supplemental material

Stability of and Attachment to Lettuce by a Culturable Porcine Sapovirus Surrogate for Human Caliciviruses Qiuhong Wang, Zhenwen Zhang, and Linda J. Saif Abstract Full Text PDF Figures

Effects of Airflow and Changing Humidity on the Aerosolization of Respirable Fungal Fragments and Conidia of Botrytis cinerea Anne Mette Madsen Abstract Full Text PDF Figures

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VOLUME 94, PART 4, MAY 2012 Website

Research Articles

Mini-Review

Downstream reactions and engineering in the microbially reconstituted pathway for Taxol Ming Jiang, Gregory Stephanopoulos and Blaine A. Pfeifer View HTML

Key players and team play: anaerobic microbial communities in hydrocarbon- contaminated aquifers Sabine Kleinsteuber, Kathleen M. Schleinitz and Carsten Vogt Download PDF (549.6 KB) View HTML

Open Access Metabolic engineering of Rhizopus oryzae for the production of platform chemicals Bas J. Meussen, Leo H. de Graaff, Johan P. M. Sanders and Ruud A. Weusthuis Download PDF (283.5 KB) View HTML

Sialic acid metabolism and sialyltransferases: natural functions and applications Yanhong Li and Xi Chen Download PDF (582.7 KB) View HTML

Antituberculars which target decaprenylphosphoryl-β-D-ribofuranose 2′-oxidase DprE1: state of art Silvia Buroni, Maria Rosalia Pasca, Ana Luisa de Jesus Lopes Ribeiro, Giulia Degiacomi and Elisabetta Molteni, et al. Download PDF (224.1 KB) View HTML

Agar degradation by microorganisms and agar-degrading enzymes Won-Jae Chi, Yong-Keun Chang and Soon-Kwang Hong Download PDF (457.8 KB) View HTML

Biotechnological products and process engineering

Enzyme-based glucose delivery as a high content screening tool in yeast-based whole-cell biocatalysis T. Grimm, M. Grimm, R. Klat, A. Neubauer and M. Palela, et al. Download PDF (190.3 KB) View HTML

Effect of pretreatment of hydrothermally processed rice straw with laccase- displaying yeast on ethanol fermentation Akihito Nakanishi, Jun Gu Bae, Kotaro Fukai, Naoki Tokumoto and Kouichi Kuroda, et al. Download PDF (789.3 KB) View HTML Supplemental

Extracellular production of lipoxygenase from Anabaena sp. PCC 7120 in Bacillus subtilis and its effect on wheat protein Chong Zhang, Tingting Tao, Qi Ying, Dongliang Zhang and Fengxia Lu, et al. Download PDF (385.9 KB) View HTML Supplemental

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Fermentation of xylose to succinate by enhancement of ATP supply in metabolically engineered Escherichia coli Rongming Liu, Liya Liang, Kequan Chen, Jiangfeng Ma and Min Jiang, et al. Download PDF (267.7 KB) View HTML

Asymmetric synthesis of (R)-1,3-butanediol from 4-hydroxy-2-butanone by a newly isolated strain Candida krusei ZJB-09162 Ren-Chao Zheng, Zheng Ge, Zhao-Kuan Qiu, Yuan-Shan Wang and Yu-Guo Zheng Download PDF (345.6 KB) View HTML

Biotechnologically relevant enzymes and proteins

PmST3 from Pasteurella multocida encoded by Pm1174 gene is a monofunctional α2–3-sialyltransferase Vireak Thon, Yanhong Li, Hai Yu, Kam Lau and Xi Chen Download PDF (428.9 KB) View HTML Supplemental

A hemolytic peptide from the mycophilic fungus Sepedonium chrysospermum (Bull.) Fr. Elisa Sanguineti, Maria E. Cosulich, Annalisa Salis, Gianluca Damonte and Mauro G. Mariotti, et al. Download PDF (432.8 KB) View HTML

A family GH51 α-L-arabinofuranosidase from Pleurotus ostreatus: identification, recombinant expression and characterization Antonella Amore, Angela Amoresano, Leila Birolo, Bernard Henrissat and Gabriella Leo, et al. Download PDF (283.2 KB) View HTML

Cloning and characterization of a novel amidase from Paracoccus sp. M-1, showing aryl acylamidase and acyl transferase activities Weiliang Shen, Honghong Chen, Kaizhi Jia, Jun Ni and Xin Yan, et al. Download PDF (440.3 KB) View HTML

Engineering of LadA for enhanced hexadecane oxidation using random- and site- directed mutagenesis Yanpeng Dong, Jiang Yan, Huiqian Du, Miao Chen and Ting Ma, et al. Download PDF (593.6 KB) View HTML

Applied genetics and molecular biotechnology

Production, purification, and characterization of the cecropin from Plutella xylostella, pxCECA1, using an intein-induced self-cleavable system in Escherichia coli Hong Wang, Xiao-lin Meng, Jin-ping Xu, Jian Wang and Hua Wang, et al. Download PDF (372.0 KB) View HTML

Inhibition of anthrax lethal factor: lability of hydroxamate as a chelating group Feng Li, Irina Chvyrkova, Simon Terzyan, Nancy Wakeham and Robert Turner, et al. Download PDF (464.3 KB) View HTML

Effective expression of soluble aglycosylated recombinant human Fcγ receptor I by low translational efficiency in Escherichia coli Kouta Hatayama, Yoshiharu Asaoka, Megumi Hoya and Teruhiko Ide Download PDF (285.4 KB) View HTML Supplemental

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Cloning and heterologous expression of a bacteriocin sakacin P from Lactobacillus sakei in Escherichia coli Haiqin Chen, Fengwei Tian, Shuo Li, Yan Xie and Hao Zhang, et al. Download PDF (328.6 KB) View HTML

Applied microbial and cell physiology

Evolution and some functions of the NprR–NprRB quorum-sensing system in the Bacillus cereus group Jorge Rocha, Victor Flores, Rosina Cabrera, Adriana Soto-Guzmán and Giovana Granados, et al. Download PDF (316.5 KB) View HTML

An engineered Escherichia coli having a high intracellular level of ATP and enhanced recombinant protein production Hye-Jung Kim, Yeong Deok Kwon, Sang Yup Lee and Pil Kim Download PDF (469.4 KB) View HTML Supplemental

Enhanced electrode-reducing rate during the enrichment process in an air- cathode microbial fuel cell Shun’ichi Ishii, Bruce E. Logan and Yuji Sekiguchi Download PDF (426.7 KB) View HTML Supplemental

Characterization of the mitochondrial NAD+-dependent isocitrate dehydrogenase of the oleaginous yeast Rhodosporidium toruloides Fan Yang, Sufang Zhang, Yongjin J. Zhou, Zhiwei Zhu and Xinping Lin, et al. Download PDF (803.9 KB) View HTML Supplemental

Bioenergy and biofuels

Engineering global transcription factor cyclic AMP receptor protein of Escherichia coli for improved 1-butanol tolerance Hongfang Zhang, Huiqing Chong, Chi Bun Ching, Hao Song and Rongrong Jiang Download PDF (501.7 KB) View HTML

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VOLUME 94, PART 5, JUNE 2012 Website

Research Articles

Mini-Review

The microbiology of metalworking fluids Ratul Saha and Robert S. Donofrio Download PDF (432.8 KB) View HTML

Open Access Two-component signal transduction in Corynebacterium glutamicum and other corynebacteria: on the way towards stimuli and targets Michael Bott and Melanie Brocker Download PDF (1.0 MB) View HTML Supplemental

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Benefit of Monascus-fermented products for hypertension prevention: a review Bao-Hong Lee and Tzu-Ming Pan Download PDF (720.9 KB) View HTML

Features and technical applications of ω-transaminases M. Shaheer Malik, Eul-Soo Park and Jong-Shik Shin Download PDF (784.7 KB) View HTML

Biotechnological products and process engineering

MDCK cell-cultured influenza virus vaccine protects mice from lethal challenge with different influenza viruses Kun Liu, Zhidong Yao, Liangyan Zhang, Junli Li and Li Xing, et al. Download PDF (321.3 KB) View HTML

A process for high-efficiency isoflavone deglycosylation using Bacillus subtilis natto NTU-18 Lun-Cheng Kuo, Ren-Yu Wu and Kung-Ta Lee Download PDF (411.2 KB) View HTML

High-yield enzymatic bioconversion of hydroquinone to α-arbutin, a powerful skin lightening agent, by amylosucrase Dong-Ho Seo, Jong-Hyun Jung, Suk-Jin Ha, Hyun-Kug Cho and Dong-Hyun Jung, et al. Download PDF (296.6 KB) View HTML

Photothermal effects of folate-conjugated Au nanorods on HepG2 cells Hua Jin, Peihui Yang, Jiye Cai, Jinhui Wang and Mei Liu Download PDF (938.3 KB) View HTML

Biotechnologically Relevant Enzymes and Proteins

CysK from Lactobacillus casei encodes a protein with O-acetylserine sulfhydrylase and cysteine desulfurization activity Biljana Bogicevic, Hélène Berthoud, Reto Portmann, Leo Meile and Stefan Irmler Download PDF (313.6 KB) View HTML

Stereoselective hydrolysis of aryl-substituted dihydropyrimidines by hydantoinases U. Engel, C. Syldatk and J. Rudat Download PDF (352.5 KB) View HTML

Nanotube-supported bioproduction of 4-hydroxy-2-butanone via in situ cofactor regeneration Liang Wang, Hongfang Zhang, Chi-Bun Ching, Yuan Chen and Rongrong Jiang Download PDF (496.1 KB) View HTML Supplemental

Applied genetics and molecular biotechnology

Understanding the mechanistic roles of 30Kc6 gene in apoptosis and specific productivity in antibody-producing Chinese hamster ovary cells Zesong Wang, Xuhui Ma, Li Fan, Won Jong Rhee and Tai Hyun Park, et al. Download PDF (653.1 KB) View HTML

Injection of duck recombinant follistatin fusion protein into duck muscle tissues stimulates satellite cell proliferation and muscle fiber hypertrophy

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He-he Liu, Ji-wen Wang, Hai-yue Yu, Rong-ping Zhang and Xi Chen, et al. Download PDF (572.7 KB) View HTML

Flagellin gene (fliC) of Thermus thermophilus HB8: characterization of its product and involvement to flagella assembly and microbial motility Christos P. Papaneophytou, Rigini M. Papi, Anastasia A. Pantazaki and Dimitrios A. Kyriakidis Download PDF (573.4 KB) View HTML

Genomics, transcriptomics, proteomics

Characterization of Lactobacillus salivarius CECT 5713, a strain isolated from human milk: from genotype to phenotype Susana Langa, Antonio Maldonado-Barragán, Susana Delgado, Rebeca Martín and Virginia Martín, et al. Download PDF (320.1 KB) View HTML

Differential proteomic analysis of an engineered Streptomyces coelicolor strain reveals metabolic pathways supporting growth on n-hexadecane Giuseppe Gallo, Luca Lo Piccolo, Giovanni Renzone, Ruggero La Rosa and Andrea Scaloni, et al. Download PDF (494.3 KB) View HTML Supplemental

Applied microbial and cell physiology

Mode of coniferous wood decay by the white rot fungus Phanerochaete carnosa as elucidated by FTIR and ToF-SIMS Sonam Mahajan, Dragica Jeremic, Robyn E. Goacher and Emma R. Master Download PDF (416.5 KB) View HTMLSupplemental

Improvement of glutathione production by metabolic engineering the sulfate assimilation pathway of Saccharomyces cerevisiae Kiyotaka Y. Hara, Kentaro Kiriyama, Akiko Inagaki, Hideki Nakayama and Akihiko Kondo Download PDF (259.8 KB) View HTML

The rhizospheres of traditional medicinal plants in Panxi, China, host a diverse selection of actinobacteria with antimicrobial properties Ke Zhao, Petri Penttinen, Qiang Chen, Tongwei Guan and Kristina Lindström, et al. Download PDF (1.8 MB) View HTML Supplemental

Methods and protocols

Expression of the soybean allergenic protein P34 in Escherichia coli and its indirect ELISA detection method Bin Liu, Da Teng, Xiumin Wang, Yalin Yang and Jianhua Wang Download PDF (377.9 KB) View HTML

Open Access Mining of unexplored habitats for novel chitinases—chiA as a helper gene proxy in metagenomics Mariana Silvia Cretoiu, Anna Maria Kielak, Waleed Abu Al-Soud, Søren J. Sørensen and Jan Dirk van Elsas Download PDF (540.2 KB) View HTML Supplemental

Determination of low concentration of Paracoccus denitrificans encapsulated in polyvinyl alcohol LentiKat’s pellets

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Lenka Vacková, Radek Stloukal and Jiří Wanner Download PDF (222.5 KB) View HTML

Environmental biotechnology

Reactivation characteristics of stored aerobic granular sludge using different operational strategies Xiangjuan Yuan, Dawen Gao and Hong Liang Download PDF (636.8 KB) View HTML

Adaptation mechanisms of bacteria during the degradation of polychlorinated biphenyls in the presence of natural and synthetic terpenes as potential degradation inducers Slavomíra Zorádová-Murínová, Hana Dudášová, Lucia Lukáčová, Milan Čertík and Katarína Šilharová, et al. Download PDF (404.7 KB) View HTML

Bioenergy and biofuels

Metabolic pathway analysis of Scheffersomyces (Pichia) stipitis: effect of oxygen availability on ethanol synthesis and flux distributions Pornkamol Unrean and Nhung H. A. Nguyen Download PDF (985.7 KB) View HTML Supplemental

Erratum

Erratum to: Biotechnology and the improvement of silage (tropical and temperate) rumen digestion: a mini-review D. A. Flores Download PDF (50.3 KB) View HTML

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VOLUME 48, ISSUE 4, AUGUST 1999 Website

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VOLUME 344-349, ISSUE , MAY 2012 Website

Research articles

Review Ranching fish using acoustic conditioning: Has it reached a dead end? Boaz Zion, Assaf Barki Show preview | PDF (1386 K) | Related articles | Related reference work articles Highlights ► Acoustic ranching of fish is reviewed.► There are solid indications that the concept bears a great potential. ► Major hurdles which science and technology need to overcome are discussed.

Genetic improvement for the development of efficient global aquaculture: A personal opinion review Trygve Gjedrem Show preview | PDF (459 K) | Related articles | Related reference work articles Highlights ► Large heritable variation. ► Non-improved stocks common. ► High potential for gain.

Diseases

Impact of the parasitic pea crab Pinnotheres novaezelandiae on aquacultured New Zealand green-lipped mussels, Perna canaliculus Oliver Trottier, Dion Walker, Andrew G. Jeffs Show preview | PDF (518 K) | Related articles | Related reference work articles Highlights ► We assess the impact of pea crabs on mussel aquaculture. ► Mean infection level of 5.3% and mean loss of 5.99 g representing ≈ 30%. ► Overall farm loss of 0.8 t or 1.97% of total product equating to US$ 3198. ► Annual industry loss estimate approximately US$ 2.16 million. ► Parasite abundance influenced by sea floor proximity.

Protective effect of four potential probiotics against pathogen-challenge of the larvae of three bivalves: Pacific oyster (Crassostrea gigas), flat oyster (Ostrea edulis) and scallop (Pecten maximus) Aditya Kesarcodi-Watson, Philippe Miner, Jean-Louis Nicolas, Rene Robert Show preview | PDF (240 K) | Related articles | Related reference work articles Highlights ► 4 probiotics tested in mollusc larviculture (Pacific oysters, flat oysters, scallops). ► Known probiotics: Alteromonas macleodii, Neptunomonas sp., Phaeobacter gallaeciensis. ► Pseudoalteromonas sp. trialled for first time. ► Increased survival with probiotic use against pathogen challenge. ► Potential exists for probiotic use during aquaculture of mollusc larvae.

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Antiparasitic effect of dietary Romet®30 (SDMX–OMP) against ciliate Cryptocaryon irritans infection in the red sea bream Pagrus major and tiger puffer Takifugu rubripes Fumi Kawano, Noritaka Hirazawa, Kjersti Gravningen, Jan Oppen Berntsen Show preview | PDF (364 K) | Related articles | Related reference work articles Highlights ► Romet®30 is Sulfadimethoxine–Ormetoprim (SDMX–OMP) combination. ► In-feed Romet®30 had a therapeutic effect against C. irritans infection. ► The suitable dose of Romet®30 was 50 mg/kg BW/day. ► The suitable duration of administration was 14 consecutive days. ► This dosing condition of Romet®30 was practically useful for aquaculture.

Role of P-glycoprotein in emamectin benzoate (SLICE®) resistance in sea lice, Lepeophtheirus salmonis Okechukwu O. Igboeli, Mark D. Fast, Jan Heumann, John F. Burka Show preview | PDF (585 K) | Related articles | Related reference work articles Highlights ► Decrease in emamectin benzoate efficacy in sea lice, Lepeophtheirus salmonis ► Emamectin benzoate interacts with P-glycoprotein ► Verapamil increases emamectin benzoate sensitivity in sea lice ► Emamectin benzoate induces overexpression of P- glycoprotein mRNA in sea lice ► Female sea lice are more sensitive to emamectin benzoate compared to the males

Effect of Inonotus obliquus enriched diet on hematology, immune response, and disease protection in kelp grouper, Epinephelus bruneus against Vibrio harveyi Ramasamy Harikrishnan, Chellam Balasundaram, Moon-Soo Heo Show preview | PDF (318 K) | Related articles | Related reference work articles Highlights ► All the doses of diet significantly influenced the weight gain from weeks 1 to 4. ► WBC, RBC, Hb, Ht, lymphocytes, and monocytes increased with all diets. ► Phagocytic activity enhanced with 1.0% and 2.0% diets from weeks 1 to 4. ► Respiratory burst and anti- protease activities enhanced all diets on weeks 2 and 4. ► Lowest mortality in 1.0% and 2.0% diets with 20% and 15% than those of 0.1% diet.

Distribution of Cardicola forsteri eggs in the gills of southern bluefin tuna (Thunnus maccoyii) (Castelnau, 1872) Catarina Norte dos Santos, Melanie Leef, Brian Jones, Nathan Bott, Daniele Giblot-Ducray, Barbara Nowak Show preview | PDF (361 K) | Related articles | Related reference work articles Highlights ► Prevalence of C. forsteri eggs was higher in the second gill arch. ► Prevalence of C. forsteri eggs was lower in the basal region of the gill filaments. ► Intensity was not different between or within the gill arches.

Confidence in assessing the effectiveness of bath treatments for the control of sea lice on Norwegian salmon farms Daniel F. Jimenez, Peter A. Heuch, Crawford W. Revie, George Gettinby Show preview | PDF (765 K) | Related articles | Related reference work articles

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Highlights ► We use confidence intervals to assess the effect of delousing bath treatments.► Six methods were used to calculate the confidence intervals. ► We examined the effect of treatment using different confidence levels. ► Interpretation and comparison of treatment effect among sites and pens.

Genetics

A genetic linkage map of swimming crab (Portunus trituberculatus) based on SSR and AFLP markers Lei Liu, Jian Li, Ping Liu, Fazhen Zhao, Baoquan Gao, Ying Du Show preview | PDF (1765 K) | Related articles | Related reference work articles Highlights ►A genetic linkage map of the swimming crab (Portunus trituberculatus) was constructed. ►The research uses “two-way pseudo-testcross” mapping strategy, SSR and AFLP markers. ►479 markers formed 51 linkage groups with an average resolution of 7.8 cM in female map. ►440 markers formed 50 linkage groups with an average resolution of 8.7 cM in male map. ►This map is the first medium density genetic linkage map in the family Portunidae.

Genetic parameters of economically important traits recorded at a given age in striped catfish (Pangasianodon hypophthalmus) Nguyen Van Sang, Gunnar Klemetsdal, Jørgen Ødegård, Hans Magnus Gjøen Show preview | PDF (334 K) | Related articles | Related reference work articles Highlights ► Partial factorial and nested mating designs were used. ► Selection for increased fillet yield is hardly to be successful. ► Efficient indirect selection for fillet weight through direct selection for body weight is suggested. ► Fillet weight, body weight and fillet fat were almost uncorrelated with fillet colour. ► Selection for fillet weight and/or body weight is expected to increase the fillet fat percentage indirectly.

Nutrition

The effect of increasing inclusion rates of soybean, pea and canola meals and their protein concentrates on the growth of rainbow trout: Concepts in diet formulation and experimental design for ingredient evaluation Stephanie A. Collins, Atul R. Desai, Graeme S. Mansfield, Janet E. Hill, Andrew G. Van Kessel, Murray D. Drew Show preview | PDF (1016 K) | Related articles | Related reference work articles Highlights ► Dietary soybean meal and canola meal reduce the growth of rainbow trout. ► Dietary pea meal has no effect on the growth of rainbow trout. ► Soybean, pea or canola protein concentrates do not reduce growth of rainbow trout.

Optimal inclusion of lupin and pea protein concentrates in extruded diets for rainbow trout (Oncorhynchus mykiss) Yuexing Zhang, Margareth Øverland, Mette Sørensen, Michael Penn, Liv Torunn Mydland, Karl D. Shearer, Trond Storebakken Show preview | PDF (592 K) | Related articles | Related reference work articles Highlights

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► Rapid growth and low FCR with lupin and pea protein in feed for rainbow trout. ► Higher digestibility of amino acids in plant protein diets than from LT fish meal. ► Any mixture of lupin and pea proteins can be used at 300 g kg−1 protein replacement. ► Pea protein concentrate is preferable to lupin concentrate at high inclusion in feed.

Optimum feed formulation for turbot, Scophthalmus maximus (Rafinesque, 1810) in the grow-out phase Eirik Leknes, Albert K. Imsland, Arnþór Gústavsson, Snorri Gunnarsson, Helgi Thorarensen, Jón Árnason Show preview | PDF (413 K) | Related articles | Related reference work articles Highlights ► We examine effects of protein and lipid levels in fed on growth, feed conversion and quality traits. ► Higher growth found in groups reared at 42.5–50% protein. ► Turbot can utilize high lipid feed efficiently. ► Lipid in fillet were affected by dietary lipid. ► Protein in current commercial feed for turbot can be reduced by 10% without negative effect on growth.

Wheat gluten and potato protein concentrate — Promising protein sources for organic farming of rainbow trout (Oncorhynchus mykiss) K. Tusche, S. Arning, S. Wuertz, A. Susenbeth, C. Schulz Show preview | PDF (209 K) | Related articles | Related reference work articles Highlights ► This study evaluated the effect organic certified proteins in rainbow trout nutrition. ► Various combinations of wheat gluten and PPC were used. ► Growth and growth performance revealed good results within all groups. ► Good nutritional status revealed no negative impact of wheat gluten or PPC in general. ► A wheat gluten inclusion up to 19% exhibits positive results for organic diets.

Compensatory growth after various levels of dietary protein restriction in rainbow trout, Oncorhynchus mykiss Hüseyin Sevgili, Belgin Hoșsu, Yılmaz Emre, Mahir Kanyılmaz Show preview | PDF (434 K) | Related articles | Related reference work articles Highlights ► Rainbow trout were subjected to dietary protein restriction (from 33.3 to 83.3% of control) for 3 weeks. ► Then they were realimented with the control for 9 weeks. ► The restricted fish recovered the weight and structural loss after the realimentation. ► These fish also utilized feed and protein more efficiently, and reduced the N loss to the environment.

Physiology and Endocrinology

Effects of electric field exposure on blood pressure, cardioventilatory activity and the physiological stress response in Arctic char, Salvelinus alpinus L. Erik Sandblom, Brankica Djordjevic, Henrik Sundh, Henrik Seth, Kristina Sundell, Jeffrey A. Lines, Anders Kiessling Show preview | PDF (680 K) | Related articles | Related reference work articles Highlights ► First blood pressure recordings in a fish subjected to an electrical field in water. ► This information can be used to explain blood spotting phenomena previously observed in

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electrically stunned fish. ► We provide a novel mechanistic explanation for the causes of death in fish that fail to recover from exposure to an electrical field in water. ► Information from this study is applicable to both electrical stunning in aquaculture settings, as well as to electrofishing in the field.

Increased water current induces micro-architectural changes to the vertebral bone of juvenile rainbow trout (Oncorhynchus mykiss) M.A.G. Owen, B. Eynon, S. Woodgate, S.J. Davies, S. Fox Show preview | PDF (497 K) | Related articles | Related reference work articles Highlights ► Trout trained using a water current (2 BL s− 1) compared to untrained trout (0 BL s− 1). ► Histomorphology and mechanical properties of trunco-caudal vertebrae assessed. ► Training increased vertebral mineralisation and autocentrum width. ► Training reduced trabecular thickness and bone area. ► Vertebral mechanical properties were not affected by training.

The effect of ions and cryoprotectants upon sperm motility and fertilization success in the loach Misgurnus anguillicaudatus George Shigueki Yasui, Takafumi Fujimoto, Lenin Arias-Rodriguez, Yasuaki Takagi, Katsutoshi Arai Show preview | PDF (528 K) | Related articles | Related reference work articles

Effect of water temperature on the development and energetics of early, mid and late-stage phyllosoma larvae of spiny lobster Sagmariasus verreauxi Q.P. Fitzgibbon, S.C. Battaglene Show preview | PDF (798 K) | Related articles | Related reference work articles Highlights ► The optimum temperature for early and mid stage phyllosoma growth and convection requirement index was 23 °C. ► Reduced growth at higher temperatures was likely due to a disequilibrium between larval development and growth rate. ► Low temperatures result in lower metabolic feeding efficiency due to increased energetic expenditure associated with activity. ► There is a downward shift in the optimum temperature for late stage phyllosoma. ► S. verreauxi phyllosoma can be cultured through metamorphosis with high survival.

Production Science

Mortality reduction in yellowtail kingfish (Seriola lalandi) larval rearing by optimising Artemia feeding regimes Lindsey D. Woolley, Gavin J. Partridge, Jian G. Qin Show preview | PDF (481 K) | Related articles | Related reference work articles Highlights ► Larval fish mortality is mainly due to larval sinking response after satiated feeding. ► Body density change is an indicator for feeding time to ensure fish neutral buoyancy. ► The use of adaptive feeding regime reduced mortality by 20%. ► Adaptive feeding is a novel tool to reduce larval fish sinking and mortality.

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Reproductive performance, growth and development time of a tropical harpacticoid copepod, Nitocra affinis californica Lang, 1965 fed with different microalgal diets Hazel Monica Matias-Peralta, Fatimah Md. Yusoff, Mohamed Shariff, Suhaila Mohamed Show preview | PDF (204 K) | Related articles | Related reference work articles Highlights ► The copepod showed the highest reproductive capacity when fed with Chaetoceros. ► The copepod had the shortest embryonic development time when fed with Tetraselmis. ► Microalgae are suitable feed for copepods due to their high PUFA contents.

Study of the enzymatic digestive profile in three species of Mediterranean sea urchins C.E. Trenzado, F. Hidalgo, D. Villanueva, M. Furné, M.E. Díaz-Casado, R. Merino, A. Sanz Show preview | PDF (436 K) | Related articles | Related reference work articles Highlights ► The digestive enzymatic profile was studied in three species of sea urchin. ► S. granularis showed a higher amylase capacity. ► P. lividus displayed a marked cellulolytic potential. ► A. lixula would be the more competitive specie with higher total digestive capacity. ► Know digestive capacity will improve feed formulation for sea urchin culture.

Effects of triploidy induction on growth and masculinization of red tilapia [Oreochromis mossambicus (Peters, 1852) × Oreochromis niloticus (Linnaeus, 1758)] Padmaja Jayaprasad Pradeep, Thekkeparambil Chandrabose Srijaya, Alessio Papini, Anil Kumar Chatterji Show preview | PDF (607 K) | Related articles | Related reference work articles Highlights ► Influence of triploidy induction on growth performance and sex ratio in red tilapia. ► Temperature treatment soon after the fertilization could also influence the sex ratio. ► Efficacy of triploidy induction using temperature shock in red tilapia.

Effects of irradiance and light spectrum on growth of the scleractinian coral Galaxea fascicularis — Applicability of LEP and LED lighting to coral aquaculture Tim Wijgerde, Peter Henkemans, Ronald Osinga Show preview | PDF (672 K) | Related articles | Related reference work articles Highlights ► We determined the effects of irradiance and light spectrum on growth of the coral Galaxea fascicularis. ► Specific growth and survival rates were monitored over a 69-day interval. ► A significant interactive effect between irradiance and spectrum was found. ► The effect of irradiance and its interaction with spectrum were likely modulated by water flow rates. ► Our results show that both broad and narrow bandwidth light sources (i.e. plasma and LED) result in high coral growth.

Reproductive performance, biochemical composition and fatty acid profile of wild-caught and 2nd generation domesticated Farfantepenaeus duorarum (Burkenroad, 1939) broodstock Maurício Emerenciano, Gerard Cuzon, Maite Mascaró, Miguel Arévalo, Elsa Noreña- Barroso, Gilberto Jerónimo, Ilie S. Racotta, Gabriela Gaxiola

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Show preview | PDF (662 K) | Related articles | Related reference work articles Highlights ► Original paper comparing the reproductive performance of wild and G2 F. duorarum. ► Interesting findings using biochemical composition/FA profile as a nutritional index. ► Multivariate analysis method contributed to explain the results. ► Wild population performed better reproductive performance.

Feeding preferences of the sea cucumber Apostichopus japonicus (Selenka) on various seaweed diets Sudong Xia, Peng Zhao, Kang Chen, Yong Li, Shilin Liu, Libin Zhang, Hongsheng Yang Show preview | PDF (482 K) | Related articles | Related reference work articles Highlights ► It is the first time that a generally applicable feeding preference model has been constructed. ► This model can calculate the feeding preference indices and the apparent digestibility coefficient. ► This is the first study about feeding preferences of A. japonicas on different seaweed diets. ► This research showed that L. japonica diet is the favorite food of A. japonicas. ► These results suggest optimum algal diets for formulated feed for A. japonicas.

Induction of settlement in larvae of the mussel Mytilus galloprovincialis using neuroactive compounds Clara Sánchez-Lazo, Inés Martínez-Pita Show preview | PDF (342 K) | Related articles | Related reference work articles Highlights ► We study the effect of neuroactive compounds on mussel larval settlement. ► The larval + response to K vary depending on the compound trialed (KCl or K2SO4). ► GABA, IBMX and K2SO4 display toxic effects in all the active concentrations. ► AC, epinephrine and KCl can induce larval settlement without acute toxic effect.

Effects of settlement cues on behaviour and substrate attachment of hatchery reared winged pearl oyster (Pteria penguin) larvae Matthew Wassnig, Paul C. Southgate Show preview | PDF (425 K) | Related articles | Related reference work articles Highlights ► We investigate the effects of known bivalve settlement cues on P. penguin larvae. ► P. penguin larvae alter behaviour in response to certain manufactured chemicals. ► Larvae display increased settlement when exposed to serotonin or KCl, but not GABA. ► Larvae settle in response to surfaces covered in a naturally formed bio-film. ► Settlement improves when larvae are provided with a suitable artificial substrate.

High-throughput sperm cryopreservation of eastern oyster Crassostrea virginica Huiping Yang, E Hu, Rafael Cuevas-Uribe, John Supan, Ximing Guo, Terrence R. Tiersch Show preview | PDF (421 K) | Related articles | Related reference work articles Highlights ► High-throughput protocol was developed for sperm cryopreservation in eastern oysters. ► Two types of straws (0.5-ml French and CBS straws) were used as packaging containers. ► Effects of cryoprotectants, cooling rates, and thawing temperatures were evaluated. ► Effects of equilibration times and sperm concentrations were evaluated. ► The protocol was tested by automated filling, sealing, labeling, and freezing system.

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Factors affecting the first cleavage interval and effects of parental generation on tetraploid production in rainbow trout (Oncorhynchus mykiss) Gregory M. Weber, Mark A. Hostuttler Show preview | PDF (493 K) | Related articles | Related reference work articles Highlights ► In vivo or in vitro ova aging increases first cleavage interval (FCI). ► Accounting for aging allows tetraploid (4N) induction based on FCI of a subgroup. ► All progeny of 4N by 4N matings were 4N based on flow cytometry analysis. ► Survival of progeny is increased with use of second generation 4N females. ► Abnormalities are reduced in progeny of second generation 4N females.

Short Communications

Evidence of non-random chromosome loss in bivalves: Differential chromosomal susceptibility in aneuploid metaphases of Crassostrea angulata (Ostreidae) and Ruditapes decussatus (Veneridae) Joana Teixeira de Sousa, Sandra Joaquim, Domitília Matias, Radhouan Ben-Hamadou, Alexandra Leitão Show preview | PDF (148 K) | Related articles | Related reference work articles

Sperm trait differences between wild and farmed Chinook salmon (Oncorhynchus tshawytscha) Sarah J. Lehnert, Daniel D. Heath, Trevor E. Pitcher Show preview | PDF (315 K) | Related articles | Related reference work articles Highlights ► Examine sperm traits in XX farmed, XY farmed and wild Chinook salmon males. ► Sperm motility and velocity were greater in farmed Chinook salmon than wild salmon. ► No difference found in sperm traits between XX and XY farmed Chinook salmon males. ► Farmed Chinook have competitive advantage in sperm competition with wild males. ► Shows increasing potential for hybridization between escaped farmed and wild salmon.

Book Review

Aquaculture and Fisheries Biotechnology, Genetic Approaches, 2nd edition, by R. A. Dunham, Auburn University, USA, 978184593651 8. Gideon Hulata Show preview | PDF (114 K) | Related articles | Related reference work articles

Corrigendum

Corrigendum to “Phenotypical and genetic characterization of Yersinia ruckeri strains isolated from recent outbreaks in farmed rainbow trout Oncorhynchus mykiss (Walbaum) in Peru” [Aquaculture 317 (2011) 229-232] Asmine Bastardo, Veronica Sierralta, Jorge León, Carmen Ravelo, Jesús L. Romalde Show preview | PDF (103 K) | Related articles | Related reference work articles

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VOLUME 49, ISSUE 1, JULY 2012 Website

Research articles

Use of biomass for the removal of heavy metals at low concentrations from freshwater for Chilean Atlantic salmon farms E. Aspé, M. Roeckel, K. Fernández Show preview | PDF (710 K) | Related articles | Related reference work articles Highlights ► The limit value for salmon culture for Al and Fe is 0.01 and 0.1 mg/L, respectively. ► Removal of Al, Fe and Mn is possible by precipitation and solid and liquid phase's separation. ► Separation of metals precipate can be accomplished in a column filled with Pinus radiata bark ► Filter with sand-anthracite media cannot separate Al precipitated at the levels required for salmon life.

Direct and continuous dissolved CO2 monitoring in shallow raceway systems: From laboratory to commercial-scale applications Maria-Teresa Borges, Jorge O. Domingues, João M. Jesus, Carlos M. Pereira Show preview | PDF (595 K) | Related articles | Related reference work articles Highlights ► A commercially available CO2 probe was tested for continuous dissolved CO2 monitoring in shallow raceways systems. ► Probe accuracy and response time were significantly affected by the type of aqueous solution used. ► Continuous monitoring is not possible without proper agitation, limiting probe utilization in real fish farms. ► A developed flow-cell enabled CO2 dynamics assessment in real farming conditions. ► Fiber optic sensors can be a solution for continuous and multipoint dissolved CO2 monitoring.

Cost analysis of a mobile fish nursery system for growing hybrid striped bass (Morone chrysops × M. saxatilis) fry Pratikshya Sapkota, Carole Engle, David Heikes, Nathan Stone Show preview | PDF (403 K) | Related articles | Related reference work articles Highlights ► Investment and total annual costs were estimated for a newly developed mobile fish nursery system. ► Total investment costs for a commercial scale system were estimated to be $41,390 but alternatives to the rotating drum filters may reduce investment costs by as much as 40%. ► Efficient use of the mobile fish nursery system would occur with 7–10 one- week production cycles a year, with pumps operating close to full capacity, and hybrid striped bass survival rates above 40%.

Ceramic clay reduces the load of organic matter and bacteria in marine fish larval culture tanks Kari J.K. Attramadal, Bjørnar Tøndel, Ingrid Salvesen, Gunvor Øie, Olav Vadstein, Yngvar Olsen Show preview | PDF (1246 K) | Related articles | Related reference work articles Highlights ► We compared the effects of addition of live algae, algae paste, and clay to rearing tanks for cod. ► Addition of clay reduced substrate levels for bacteria in the rearing water Aquaculture Journals Page: 63 of 169

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compared to algae. ► Clay aggregated and transported organic matter to the bottom, where it could be removed. ► Rearing tanks receiving clay showed a lower abundance of bacteria than tanks receiving algae. ► Except from one tank, larvae in tanks added clay performed best of the three treatments.

Aquaculture Farm Food Safety and Diseases Risk Assessment (AquaFRAM): Development of a spreadsheet tool for salmon farms J.M. Soon, R.N. Baines Show preview | PDF (1498 K) | Related articles | Related reference work articles Highlights ► Aquaculture Farm Food Safety and Diseases Risk Assessment (AquaFRAM) spreadsheet was developed. ► Functions as a self-assessment risk ranking and risk-learning tool to determine the potential of farm food safety hazards and diseases. ► AquaFRAM is also appropriate as an educational and training tool for full-time and seasonal farm workers.

Benthic cages versus floating cages in Octopus vulgaris: Biological performance and biochemical composition feeding on Boops boops discarded from fish farms J. Estefanell, J. Roo, R. Guirao, M. Izquierdo, J. Socorro Show preview | PDF (356 K) | Related articles | Related reference work articles Highlights ► This study tested a benthic cage and a floating cage to culture cephalopods. ► The benthic cage has no visual impact and can be used in exposed coasts. ► Both systems were tested on Octopus vulgaris for 2 months in two consecutive trails ► Octopuses showed high growth and high survival in both rearing systems. ► Farmed octopus showed low lipid and high n-3 HUFA content in both rearing systems.

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VOLUME 20, PART 3, JUNE 2012 Website

Research articles

The effects of less-expensive plant protein sources replaced with soybean meal in the juvenile diet of grass carp (Ctenopharyngodon idella): growth, nutrient utilization and body composition Kenan Köprücü and Ebru Sertel Download PDF (223.6 KB) View HTML

Effect of an organic fertilizer on growth of blue-green alga Spirulinaplatensis İlknur Ak Download PDF (302.8 KB) View HTML

Economic evaluation of a stratified transport method for Atlantic halibut (Hippoglossus hippoglossus) juveniles Peter J. Sykes, Carol A. McClure, Debbie J. Martin-Robichaud, Charles G. Caraguel and K. Larry Hammell Download PDF (312.6 KB) View HTML

Evaluation of laser labeling on growth and survival of the freshwater pearl mussel, Hyriopsis cumingii Longlong Fu, Zhiyi Bai, Wu Jin, Genfang Zhang and Jiale Li Download PDF (244.6 KB) View HTML

Total fish meal replacement with rapeseed protein concentrate in diets fed to rainbow trout (Oncorhynchus mykiss Walbaum) H. Slawski, H. Adem, R.-P. Tressel, K. Wysujack and U. Koops, et al. Download PDF (248.4 KB) View HTML

High-density growth and crude protein productivity of a thermotolerant Chlorella vulgaris: production kinetics and thermodynamics Shahid Mahboob, Abdul Rauf, Muhammed Ashraf, Tayyaba Sultana and Salma Sultana, et al. Download PDF (254.2 KB) View HTML Supplemental

Larval rearing environment influences the physiological adaptation in juvenile Atlantic cod, Gadus morhua Roland Koedijk, Albert Kjartansson Imsland, Arild Folkvord, Sigurd Olav Stefansson and Thor Magne Jonassen, et al. Download PDF (376.2 KB) View HTML

Effects of fish oil and partial fish meal substitution with oilseed oils and meals on growth performance, nutrient utilization and health of the rainbow trout Oncorhynchus mykiss Derya Güroy, Betül Güroy, Daniel Lee Merrifield, Ahmet Adem Tekinay and Simon John Davies, et al. Download PDF (284.1 KB) View HTML

Probiotic activity of Bacillus subtilis in juvenile freshwater prawn, Macrobrachium rosenbergii (de Man) at different methods of administration to the feed Mehran Avakh Keysami, Masoumeh Mohammadpour and Che Roos Saad Download PDF (235.0 KB) View HTML

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Effects of dietary propolis supplementation on growth performance, immune responses, disease resistance and body composition of juvenile eel, Anguilla japonica Jun-Young Bae, Gun Hyun Park, Jeong-Yeol Lee, Okorie Eme Okorie and Sungchul C. Bai Download PDF (266.3 KB) View HTML

Scoring of the extent and intensity of carp (Cyprinus carpio) skin changes made by cormorants (Phalacrocorax carbo sinensis): relationship between morphometric and histological indices Stefan Skorić, Božidar Rašković, Vesna Poleksić, Zoran Gačić and Mirjana Lenhardt Download PDF (407.1 KB) View HTML

Biofouling on Greenshell™ mussel (Perna canaliculus) farms: a preliminary assessment and potential implications for sustainable aquaculture practices Chris M. C. Woods, Oliver Floerl and Barbara J. Hayden Download PDF (432.9 KB) View HTML

Effect of diatom supplementation during the nursery rearing of Litopenaeus vannamei (Boone, 1931) in a heterotrophic culture system Leandro Cesar Godoy, Clarisse Odebrecht, Eduardo Ballester, Tatiana Germano Martins and Wilson Wasielesky Jr. Download PDF (349.9 KB) View HTML

Evaluation of VIE (Visible Implant Elastomer) and PIT (Passive Integrated Transponder) physical tagging systems for the identification of red porgy fingerlings (Pagrus pagrus) Mohamed Soula, Ana Navarro, Silvia Hildebrandt, María J. Zamorano and Javier Roo, et al. Download PDF (279.8 KB) View HTML

Influence of food deprivation and high stocking density on energetic metabolism and stress response in red porgy, Pagrus pagrus L Raúl Laiz-Carrión, Inês Rosa Viana, Juana Rosa Cejas, Ignacio Ruiz-Jarabo and Salvador Jerez, et al. Download PDF (384.7 KB) View HTML

Book review

National Research Council (NRC): Nutrient requirements of fish and shrimp The National Academies Press, Washington, D.C., 2011, 376 + XVI pp, £128 (Hardback), ISBN: 978-0-309-16338-5 Malcolm Jobling Download PDF (88.1 KB) View HTML

P. K. T. Woo and K. Buchmann (eds): Fish parasites: pathobiology and protection CAB International, Wallingford, 2012, 383 + X pp, £94/US$180/€125 (Hardback), ISBN 978-1-84593-806-2 Malcolm Jobling Download PDF (109.6 KB) View HTML

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VOLUME 18, PART 3, JUNE 2012 Website

Research articles

Reviews article

A review of the effects of ingredient composition and processing conditions on the physical qualities of extruded high-energy fish feed as measured by prevailing methods (pages 233–248) M. SØRENSEN Abstract Full Article (HTML) PDF(1098K) References

Original articles

Effect of different sources and levels of dietary phospholipids on performances and fatty acid composition of pikeperch (Sander lucioperca) larvae (pages 249– 257) N. HAMZA, P. KESTEMONT, I.B. KHEMIS, M. MHETLI and C. CAHU Abstract Full Article (HTML) PDF(803K) References

The influence of dietary arachidonic acid on the immune response and performance of Pacific whiteleg shrimp, Litopenaeus vannamei, at high stocking density (pages 258–271) V. AGUILAR, I.S. RACOTTA, E. GOYTORTÚA, M. WILLE, P. SORGELOOS, R. CIVERA and E. PALACIOS Abstract Full Article (HTML) PDF(1042K) References

Effect of dietary β-1,3-glucan on the immune response of Litopenaeus vannamei exposed to nitrite-N (pages 272–280) H.-X. ZHAO, J.-M. CAO, A.-L. WANG, Z.-Y. DU, Y.-H. HUANG, J.-X. TIAN, G.-L. LI and H.-B. LAN Abstract Full Article (HTML) PDF(817K) References

Effect of Lactococcus lactis and Enterococcus faecium on growth performance, digestive enzymes and immune response of grouper Epinephelus coioides (pages 281–289) Y.-Z. SUN, H.-L. YANG, R.-L. MA, K. SONG and J.-S. LI Abstract Full Article (HTML) PDF(858K) References

Effects of feeding rates on growth performances of white sturgeon (Acipenser transmontanus) fries (pages 290–296) N. DE RIU, K.K. ZHENG, J.W. LEE, S.H. LEE, S.C. BAI, G. MONIELLO and S.S.O. HUNG Abstract Full Article (HTML) PDF(813K) References

Effect of dietary fish protein hydrolysate on growth, feed utilization and IGF-I levels of Japanese flounder (Paralichthys olivaceus) (pages 297–303) K. ZHENG, M. LIANG, H. YAO, J. WANG and Q. CHANG Abstract Full Article (HTML) PDF(838K) References

Tissue fluoride accumulation and kidney lesions in freshwater-reared Atlantic salmon (Salmo salar) fed with high dietary fluoride concentrations (pages 304– 312)

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J.Ø. HANSEN, M.H. PENN, K.D. SHEARER, T. STOREBAKKEN and M. ØVERLAND Article first published online: 4 OCT 2011 | DOI: 10.1111/j.1365-2095.2011.00897.x Abstract Full Article (HTML) PDF(839K) References

Histology and growth performance in rainbow trout (Oncorhynchus mykiss) in response to increasing dietary concentration of sparteine, a common alkaloid in lupins (pages 313–320) E. SERRANO, T. STOREBAKKEN, A. BORQUEZ, M. PENN, K.D. SHEARER, P. DANTAGNAN and L.T. MYDLAND Abstract Full Article (HTML) PDF(1094K) References

Effect of dietary oxidized fish oil on growth performance, body composition, antioxidant defence mechanism and liver histology of juvenile largemouth bass Micropterus salmoides (pages 321–331) Y.-J. CHEN, Y.-J. LIU, H.-J. YANG, Y. YUAN, F.-J. LIU, L.-X. TIAN, G.-Y. LIANG and R.-M. YUAN Abstract Full Article (HTML) PDF(1027K) References

Effect of dietary inclusion of lysozyme on growth performance and plasma biochemical parameters of rainbow trout (Oncorhynchus mykiss) (pages 332–339) J. DENG, B. BI, Q. AN, L. KONG, Q. WANG, L. TAO and X. ZHANG Abstract Full Article (HTML) PDF(773K) References

Effect of dietary arachidonic acid levels on growth performance, hepatic fatty acid profile, intermediary metabolism and antioxidant responses for juvenile Synechogobius hasta (pages 340–348) Z. LUO, X.-Y. TAN, X.-D. LI and G.-J. YIN Abstract Full Article (HTML) PDF(830K) References

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VOLUME 43, PART 5, APRIL 2012 Website

Research articles

Comparative analysis of reproductive performance between spring and autumn forms of Persian sturgeon, Acipenser persicus, Bordin, 1897: with an emphasis on sex steroids and milt quality (pages 641–648) Saeed Hajirezaee and Gholam Reza Rafiee Abstract Full Article (HTML) PDF(723K) References

Alligator gar (Atractosteus spatula, Lacépède 1803) vitellogenin: purification, characterization and establishment of an enzyme-linked immunosorbent assay (pages 649–661) Roberto Mendoza, Olga Santillán, Agnés Revol, Carlos Aguilera and Julio Cruz Abstract Full Article (HTML) PDF(809K) References

Influence of dietary administration of a probiotic strain Shewanella putrefaciens on senegalese sole (Solea senegalensis, Kaup 1858) growth, body composition and resistance to Photobacterium damselae subsp piscicida (pages 662–669) Inés García de la Banda, Carmen Lobo, Mariana Chabrillón, Juan Manuel León-Rubio, Salvador Arijo, Gema Pazos, Luisa María Lucas and Miguel Ángel Moriñigo Abstract Full Article (HTML) PDF(622K) References

Benchmarking growth of farmed Atlantic cod, Gadus morhua: a case study in Ireland (pages 670–678) Majbritt Bolton-Warberg and Richard D FitzGerald Abstract Full Article (HTML) PDF(726K) References

Relationship between oxygen consumption, growth and survival of larval fish (pages 679–687) Aki Miyashima, Tomonari Kotani, Hirohito Tawa and Hiroshi Fushimi Abstract Full Article (HTML) PDF(4214K) References

Evaluation of a 4-h static copper sulphate treatment against experimental infection of Flavobacterium columnare in channel catfish (Ictalurus punctatus) (pages 688–695) Ahmed M Darwish, Andrew Mitchell and David L Straus Abstract Full Article (HTML) PDF(661K) References

Examination of broodstock diet effects on egg production and egg quality in flame angelfish (Centropyge loriculus) (pages 696–705) Chatham K Callan, Charles W Laidley, Ian P Forster, Kenneth M Liu, Linda J Kling and Allen R Place Abstract Full Article (HTML) PDF(685K) References

Influence of light intensity on biofilm formation and the performance of pink shrimp Farfantepenaeus paulensis juveniles reared in cages (pages 706–712) Wilson Wasielesky Jr, Paulo César Abreu, Luis Henrique Poersch, Fabiano Thompson and Eduardo Luis Cupertino Ballester Abstract Full Article (HTML) PDF(631K) References

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A new classification of pre-ovulatory oocyte maturation stages in pikeperch, Sander lucioperca (L.), and its application during artificial reproduction (pages 713–721) Daniel Żarski, Dariusz Kucharczyk, Katarzyna Targońska, Katarzyna Palińska, Krzysztof Kupren, Pascal Fontaine and Patrick Kestemont Abstract Full Article (HTML) PDF(688K) References

Fatty acid and proximate composition of bluefin tuna (Thunnus thynnus) muscle with regard to plasma lipids (pages 722–729) Natalija Topic Popovic, Lidija Kozacinski, Ivancica Strunjak-Perovic, Rozelindra Coz-Rakovac, Margita Jadan, Zeljka Cvrtila-Fleck and Josip Barisic Abstract Full Article (HTML) PDF(635K) References

Feed intake, growth and metabolism of Nile tilapia (Oreochromis niloticus) in relation to dissolved oxygen concentration (pages 730–744) An Tran-Duy, Anne A van Dam and Johan W Schrama Abstract Full Article (HTML) PDF(761K) References

Partial replacement of fish meal with peanut meal in practical diets for the Pacific white shrimp, Litopenaeus vannamei (pages 745–755) Xiang-he Liu, Ji-dan Ye, Kun Wang, Jiang-hong Kong, Wei Yang and Lei Zhou Abstract Full Article (HTML) PDF(665K) References

The influence of temperature and presence of predators on growth, survival and energy allocation for reproduction in the Catarina scallop Argopecten ventricosus (pages 756–766) Citlali Guerra, Alfonso Nivardo Maeda-Martínez, Alfredo Hernandez-Llamas, Maria Teresa Sicard-González, Stefan Koenigstein, Doris Abele and Eva E R Philipp Abstract Full Article (HTML) PDF(1174K) References

Effects of substituting dietary fish oil with crude palm oil and palm fatty acid distillate on growth, muscle fatty acid composition and the activities of hepatic lipogenic enzymes in snakehead (Channa striatus, Bloch 1793) fingerling (pages 767–776) Mohammed Aliyu-Paiko and Roshada Hashim Abstract Full Article (HTML) PDF(650K) References

Effects of embryonic exposure to α-lipoic acid or ascorbic acid on hatching rate and development of zebrafish (Danio rerio) (pages 777–788) Sheena Francis, Rupika Delgoda and Ronald Young Abstract Full Article (HTML) PDF(706K) References

Dietary lycopene supplementation on Nile Tilapia (Oreochromis niloticus) juveniles submitted to confinement: effects on cortisol level and antioxidant response (pages 789–798) Pamela M Girao, Elyara M Pereira da Silva and Mariza P de Melo Abstract Full Article (HTML) PDF(694K) References

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VOLUME 43, PART 6, MAY 2012 Website

Research articles

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The settlement and reproductive success of Lepeophtheirus salmonis (Krøyer 1837; Copepoda: Caligidae) on atypical hosts (pages 799–805) Campbell C Pert, A Jennifer Mordue (Luntz), Bríd O'Shea and Ian R Bricknell Abstract Full Article (HTML) PDF(607K) References

Apparent digestibility coefficients of selected feed ingredients for juvenile hybrid tilapia, Oreochromis niloticus×Oreochromis aureus (pages 806–814) Qi-Cun Zhou and Yi-Rong Yue Abstract Full Article (HTML) PDF(601K) References

Seasonal reproductive cycle of Waigieu seaperch (Psammoperca waigiensis) (pages 815–830) Hung Quoc Pham, Anh Tuong Nguyen, Elin Kjørsvik, Mao Dinh Nguyen and Augustine Arukwe Abstract Full Article (HTML) PDF(1457K) References

Effect of different live food on survival and growth of first feeding barber goby, Elacatinus figaro (Sazima, Moura & Rosa 1997) larvae (pages 831–834) Guilherme de F Côrtes and Mônica Y Tsuzuki Abstract Full Article (HTML) PDF(574K) References

Detection of Koi herpesvirus: impact of extraction method, primer set and DNA polymerase on the sensitivity of polymerase chain reaction examinations (pages 835–842) Kirsten Meyer, Sven Michael Bergmann, Marian van der Marel and Dieter Steinhagen Abstract Full Article (HTML) PDF(559K) References

Preliminary evaluation of growth performance and immune response of Nile tilapia Oreochromis niloticus supplemented with two putative probiotic bacteria (pages 843–852) Mohammad T Ridha and Ismail S Azad Abstract Full Article (HTML) PDF(684K) References

Fecundity of the sea louse Caligus rogercresseyi on its native host Eleginops maclovinus captured near salmon farms in southern Chile (pages 853–860) M Teresa González, Carlos Molinet, Bárbara Arenas, Gladys Asencio and Juan Carvajal Abstract Full Article (HTML) PDF(661K) References

Effect of dietary willow herb, Epilobium hirsutum extract on growth performance, body composition, haematological parameters and Aeromonas hydrophila challenge on common carp, Cyprinus carpio (pages 861–869) Somayeh Pakravan, Abdolmajid Hajimoradloo and Rasool Ghorbani Abstract Full Article (HTML) PDF(646K) References

Productive performance of a new synthetic red tilapia population ‘Pargo- UNAM’ compared with that of wild-type Nile tilapia (Oreochromis niloticus L.) (pages 870–878) J G Ramírez-Paredes, M Garduño-Lugo and G Muñoz-Córdova Abstract Full Article (HTML) PDF(692K) References

Purification and partial characterization of GtHs (cfLH and cfFSH) from Indian walking catfish (Clarias batrachus) (L.) and development of a homologous ELISA for cfLH (pages 879–896) Shrabanti Sarkar and Panchanan Nath Abstract Full Article (HTML) PDF(1063K) References

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Molecular characterization, inductive expression and mechanism of interleukin- 10 gene induction in the Indian major carp, catla (Catla catla) (pages 897–907) B Swain, M Samanta, M Basu, P Panda, B R Sahoo, N K Maiti, B K Mishra and A E Eknath Abstract Full Article (HTML) PDF(1665K) References

Haemorrhagic septicaemia in the hybrid surubim (Pseudoplatystoma corruscans×Pseudoplatystoma fasciatum) caused by Aeromonas hydrophila (pages 908–916) Bruno Corrêa da Silva, José Luiz Pedreira Mouriño, Felipe Nascimento Vieira, Adolfo Jatobá, Walter Quadros Seiffert and Mauricio Laterça Martins Abstract Full Article (HTML) PDF(736K) References

Dietary lysine requirement of large yellow croaker (Pseudosciaena crocea, Richardson 1846) larvae (pages 917–928) Fengjun Xie, Qinghui Ai, Kangsen Mai, Wei Xu and Xiaojie Wang Abstract Full Article (HTML) PDF(686K) References

Ultra highly sensitive method for detecting Flavobacterium psychrophilum using high-gradient immunomagnetic separation with a polymerase chain reaction (pages 929–939) Uni Ryumae, Kyoko Hibi, Yasutoshi Yoshiura, Huifeng Ren and Hideaki Endo Abstract Full Article (HTML) PDF(669K) References

Size measurement and nutritional condition evaluation methods in sandfish (Holothuria scabra Jaeger) (pages 940–948) Satoshi Watanabe, Jacques Morales Zarate, Joemel Gentelizo Sumbing, Maria Junemie Hazel Lebata-Ramos and Marie Frances Nievales Abstract Full Article (HTML) PDF(760K) References

Short Communications

Preliminary observations of survival and growth of European hake in captivity (pages 949–954) Aurélie Jolivet, Hélène de Pontual, Magali Hervy, Yves-Marie Paulet and Ronan Fablet Abstract Full Article (HTML) PDF(578K) References

The South American freshwater fish Prochilodus lineatus (Actinopterygii: Characiformes: Prochilodontidae): new species in Vietnamese aquaculture (pages 955–958) Lukáš Kalous, Anh The Bui, Miloslav Petrtýl, Jörg Bohlen and Petra Chaloupková Abstract Full Article (HTML) PDF(809K) References

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VOLUME 15, PART 2, APRIL 2012 Website

No new issue available

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VOLUME 98, PART 3, APRIL 2012 Website

Research articles

Nazir J, Spengler M, Marschang RE Environmental persistence of amphibian and reptilian ranaviruses | Full text in pdf format

Aranguren LF, Tang KFJ, Lightner DV Protection from yellow head virus (YHV) infection in Penaeus vannamei pre- infected with Taura syndrome virus (TSV) | Full text in pdf format

Chang YS, Liu WJ, Chen TC, Chan TY, Liu KF, Chuang JC, Kou GH, Lo CF, Wang HC Feeding hermit crabs to shrimp broodstock increases their risk of WSSV infection | Full text in pdf format

Vazquez-Boucard C, Escobedo-Fregoso C, Duran-Avelar MdJ, Mercier L, Llera-Herrera R, Escobedo-Bonilla C, Vibanco-Perez N Crassostrea gigas oysters as a shrimp farm bioindicator of white spot syndrome virus | Full text in pdf format

Sanil NK, Suja G, Lijo J, Vijayan KK First report of Perkinsus beihaiensis in Crassostrea madrasensis from the Indian subcontinent | Full text in pdf format

Quinn RA, Metzler A, Tlusty M, Smolowitz RM, Leberg P, Chistoserdov AY Lesion bacterial communities in American lobsters with diet-induced shell disease | Full text in pdf format

Salvador R, Toazza CS, Moraes JRE, Moraes FR Inflammatory responses of Nile tilapia Oreochromis niloticus to Streptococcus agalactiae: effects of vaccination and yeast diet supplement | Full text in pdf format

NOTES

Une Y, Matsui K, Tamukai K, Goka K Eradication of the chytrid fungus Batrachochytrium dendrobatidis in the Japanese giant salamander Andrias japonicus | Full text in pdf format

Corsaro D, Work TM Candidatus Renichlamydia lutjani, a Gram-negative bacterium in internal organs of blue-striped snapper Lutjanus kasmira from Hawaii | Full text in pdf format

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Svoboda J, Kozubíková E, Kozák P, Kouba A, Bahadir Koca S, Diler Ö, Diler I, Policar T, Petrusek A PCR detection of the crayfish plague pathogen in narrow-clawed crayfish inhabiting Lake Eğirdir in Turkey | Full text in pdf format

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VOLUME 99, PART 1, MAY 2012 Website

Research articles

Gray MJ, Miller DL, Hoverman JT Reliability of non-lethal surveillance methods for detecting ranavirus infection | Full text in pdf format

Løvoll M, Alarcón M, Bang Jensen B, Taksdal T, Kristoffersen AB, Tengs T Quantification of piscine reovirus (PRV) at different stages of Atlantic salmon Salmo salar production | Full text in pdf format

Korsnes K, Karlsbakk E, Nylund A, Nerland AH Horizontal transmission of nervous necrosis virus between turbot Scophthalmus maximus and Atlantic cod Gadus morhua using cohabitation challenge | Full text in pdf format

Kahns S, Skall HF, Kaas RS, Korsholm H, Bang Jensen B, Jonstrup SP, Dodge MJ, Einer-Jensen K, Stone D, Olesen NJ European freshwater VHSV genotype Ia isolates divide into two distinct subpopulations | Full text in pdf format

Gregori M, Aznar FJ, Abollo E, Roura Á, González ÁF, Pascual S Nyctiphanes couchii as intermediate host for the acanthocephalan Bolbosoma balaenae in temperate waters of the NE Atlantic | Full text in pdf format

Pérez-Campos RA, Rodríguez-Canul R, Pérez-Vega JA, González-Salas C, Guillén-Hernández S High serotonin levels due to the presence of the acanthocephalan Hexaglandula corynosoma could promote changes in behavior of the fiddler crab Uca spinicarpa | Full text in pdf format

Gómez-Gutiérrez J, Strüder-Kypke MC, Lynn DH, Shaw TC, Aguilar-Méndez MJ, López- Cortés A, Martínez-Gómez S, Robinson CJ Pseudocollinia brintoni gen. nov., sp. nov. (Apostomatida: Colliniidae), a parasitoid ciliate infecting the euphausiid Nyctiphanes simplex | Full text in pdf format

NOTE

Seibel H, Siebert U, Schöpper H, Wohlsein P Granulosa cell tumour in a harbour porpoise (Phocoena phocoena) from German

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waters | Full text in pdf format

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VOLUME 32, PART 6, JUNE 2012 Website

Research articles

Regular Papers

Oral administration of recombinant epinecidin-1 protected grouper (Epinephelus coioides) and zebrafish (Danio rerio) from Vibrio vulnificus infection and enhanced immune-related gene expressions Chieh-Yu Pan, Tsui-Chin Huang, Yi-Da Wang, Yu-Chih Yeh, Cho-Fat Hui, Jyh-Yih Chen Show preview | PDF (1400 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Examine recombinant epinecidin-1 inhibited bacterial growth in in vitro test. ► Recombinant epinecidin-1 feed in zebrafish and grouper showed high survival rates. ► Recombinant epinecidin-1 modulated the expressions of immune-responsive genes in fish.

New insights in flat oyster Ostrea edulis resistance against the parasite Bonamia ostreae B. Morga, T. Renault, N. Faury, I. Arzul Show preview | PDF (1639 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Bonamia ostreae is an intra-haemocytes parasite. ► Flat oyster Ostrea edulis, is the natural host of B. ostreae. ► In this study we have studied genes expressed in response to the parasite. ► Extracellular superoxide dismutase (OeEcSOD) is up regulated in resistant haemocyte. ► Genes involved in apoptosis is up regulated in resistant haemocytes from flat oyster.

Effect of dietary vitamin C on the growth performance and innate immunity of juvenile cobia (Rachycentron canadum) Qicun Zhou, Ligai Wang, Hualang Wang, Fengjun Xie, Tuo Wang Show preview | PDF (212 K) | Related articles | Related reference work articles Highlights Aquaculture Journals Page: 77 of 169

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► Growth and survival were significantly affected by the dietary vitamin C levels. ► Dietary vitamin C influenced innate immunity such as serum lysozyme, SOD, AKP, Ig. ► Dietary vitamin C enhanced the protection against infection of Vibrio harveyi.

Effects of dietary bovine lactoferrin on growth, physiological performance, iron metabolism and non-specific immune responses of Siberian sturgeon Acipenser baeri K. Eslamloo, B. Falahatkar, S. Yokoyama Show preview | PDF (509 K) | Related articles | Related reference work articles Highlights ► Lactoferrin was administrated in Siberian sturgeon diet. ► Fish showed no significant different in growth parameters and hematological features. ► Lactoferrin improved some physiological and immunological parameters.

Administration of recombinant Reishi immunomodulatory protein (rLZ-8) diet enhances innate immune responses and elicits protection against nervous necrosis virus in grouper Epinephelus coioides Yen-Chou Kuan, Fuu Sheu, Guo-Chi Lee, Ming-Wei Tsai, Chih-Liang Hung, Fan-Hua Nan Show preview | PDF (689 K) | Supplementary content | Related articles | Related reference work articles Highlights ► We evaluate the immune stimulating effect of recombinant Reishi protein in grouper. ► We test the anti-viral challenging capacity of recombinant Reishi protein in grouper. ► The treated grouper exhibited enhanced innate immune responses. ► The treated fish showed significantly improved post viral challenge survival rate. ► Recombinant Reishi protein could be an anti-pathogen immune enhancer.

The effect of lycopene on oxytetracycline-induced oxidative stress and immunosuppression in rainbow trout (Oncorhynchus mykiss, W.) M. Enis Yonar Show preview | PDF (183 K) | Related articles | Related reference work articles Highlights ► Administration of lycopene alone stimulated immune system parameters. ► OTC caused oxidative stress in tissues. ► OTC had a suppressive effect on the specific and non-specific immune system. ► Treatment with lycopene showed amelioration in the antioxidant status of tissues. ► Treatment with lycopene provided a protective effect against immunosuppression.

Haemato-immunological and growth response of mirror carp (Cyprinus carpio) fed a tropical earthworm meal in experimental diets M.D. Rawling, D.L. Merrifield, D.L. Snellgrove, H. Kühlwein, A. Adams, S.J. Davies Show preview | PDF (194 K) | Related articles | Related reference work articles Highlights ► Feeding Perionyx excavatus meal had positive effects on growth and feed utilisation efficiency; however it appears this may be offset by reductions in immune responses. ► Compared to fish fed control and soybean meals, carp fed P. excavatus meal showed a decrease in respiratory burst activity and total circulatory leukocyte populations. ► Compared to fish fed control and soybean meals, carp fed P. excavatus meal showed significant elevations in haemoglobin and subsequently MCHC and MCH.

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Blocking the large extracellular loop (LEL) domain of FcTetraspanin-3 could inhibit the infection of white spot syndrome virus (WSSV) in Chinese shrimp, Fenneropenaeus chinensis Lang Gui, Bing Wang, Fu-Hua Li, Yu-Miao Sun, Zhan Luo, Jian-Hai Xiang Show preview | PDF (810 K) | Related articles | Related reference work articles Highlights ► We expressed the recombinant peptide of LEL domain in FcTetraspanin-3 and produced the antibody anti-LEL. ► FcTetraspanin-3 in intestine and hepatopancreas was revealed by immunofluorescence. ► The anti-LEL antibody can significantly reduce the mortality of shrimp challenged by WSSV. ► A sensible decrease of the WSSV copy number was found in the FcTetraspanin-3 knockdown shrimp. ► The LEL domain of FcTetraspanin-3 might mediate the entry of WSSV.

The effect of mistletoe, Viscum album coloratum, extract on innate immune response of Nile tilapia (Oreochromis niloticus) Kwan-Ha Park, Sang-Hoon Choi Show preview | PDF (498 K) | Related articles | Related reference work articles Highlights ► Tilapia fed with mistletoe enhanced activities of all immunological parameters (P < 0.05). ► The group fed 50 mg mistletoe kg−1 dry diet showed the highest percentage survival (83%). ► Mistletoe stimulates the immunity and makes tilapia more resistant to Aeromonas hydrophila infection.

Cloning and characterization of the grass carp (Ctenopharyngodon idella) Toll- like receptor 22 gene, a fish-specific gene Jianjian Lv, Rong Huang, Huaying Li, Daji Luo, Lanjie Liao, Zuoyan Zhu, Yaping Wang Show preview | PDF (2129 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Identified TLR22 cDNA and genomic sequences with an uninterrupted exon in grass carp. ► Studied the expression profiles in different tissues and different embryonic development stages. ► The TLR22 expression was up-regulated after GCRV viral infection. ► Detected nine single nucleotide polymorphisms in the TLR22 genomic sequence.

Increases in immune parameters by inulin and Bacillus subtilis dietary administration to gilthead seabream (Sparus aurata L.) did not correlate with disease resistance to Photobacterium damselae Rebeca Cerezuela, Francisco A. Guardiola, José Meseguer, M. Ángeles Esteban Show preview | PDF (591 K) | Related articles | Related reference work articles Highlights ► Effect of inulin and Bacillus subtilis on immune parameters and gene expression. ► Experimental diets stimulated some immune parameters. ► No effect on gene expression was observed. ► No effect on survival of seabream to the challenge with Photobacterium damselae.

Genomic organization, promoter characterization and expression analysis of the leukocyte cell-derived chemotaxin-2 gene in Epinephelus akaraa Xiaofeng Shi, Zhiwen Zhang, Meng Qu, Shaoxiong Ding, Leyun Zheng Show preview | PDF (1825 K) | Related articles | Related reference work articles

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Highlights ► The genomic structure of the LECT2 gene from Epinephelus akaraa was identified. ► mRNA level of LECT2 at different time points after bacterial infection was detected. ► The potential regulatory elements in the promoter region were first reported in fish. ► Transcriptional activity analysis of EaLECT2 promoter was performed. ► Fusion LECT2 is for the first time obtained in a soluble form from Escherichia coli.

Reduced inflammatory response to Aeromonas salmonicida infection in common carp (Cyprinus carpio L.) fed with β-glucan supplements Alberto Falco, Patrick Frost, Joanna Miest, Nicolas Pionnier, Ilgiz Irnazarow, David Hoole Show preview | PDF (693 K) | Related articles | Related reference work articles Highlights ► β-glucans down-regulated the expression of inflammatory-related genes in carp. ► tnfa1 and tnfa2 were up-regulated in head kidney from infected fish fed β-glucans. ► tnfα1, tnfα2, il1β and il6 were down-regulated in gut from infected fish fed β-glucans. ► Specific antibodies against A. salmonicida were reduced in fish fed β-glucans.

Protection of Penaeus monodon against white spot syndrome virus by inactivated vaccine with herbal immunostimulants Aiyakani Yogeeswaran, Subramanian Velmurugan, Stanislas Mary Josephine Punitha, Mariavincent Michael Babu, Thangaswamy Selvaraj, Thangamani Kumaran, Thavasimuthu Citarasu Show preview | PDF (632 K) | Related articles | Related reference work articles

EF1α is a useful internal reference for studies of gene expression regulation in amphioxus Branchiostoma japonicum Yanfeng Wang, Shicui Zhang Show preview | PDF (707 K) | Related articles | Related reference work articles Highlights ► Expression of ACTB in normal tissues was less stable than that of other three HKGs. ► Expression of EF1α in LPS-exposed animals was most stable. ► Expression of EF1α in LTA- exposed animals was least fluctuated. ► EF1α is a suitable internal control for qRT-PCR studies.

Cloning and functional characterisation of a peroxiredoxin 1 (NKEF A) cDNA from Atlantic salmon (Salmo salar) and its expression in fish infected with Neoparamoeba perurans Grace H. Loo, Drew L. Sutton, Kathryn A. Schuller Show preview | PDF (1539 K) | Related articles | Related reference work articles Highlights ► Peroxiredoxin 1 (Prx 1) has been implicated in the immune response of fish. ► Amoebic gill disease (AGD) is a problem for Atlantic salmon culture in Australia. ► Prx 1 gene expression is down-regulated in AGD-affected Atlantic salmon gill. ► Recombinant Atlantic salmon Prx 1 displays a double displacement reaction mechanism. ► Recombinant Atlantic 5 −1 −1. salmon Prx 1 has a kcat/Km with H2O2 of 1.5 × 10 M s

Hilyses®, fermented Saccharomyces cerevisiae, enhances the growth performance and skin non-specific immune parameters in rainbow trout (Oncorhynchus mykiss)

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Najmeh Sheikhzadeh, Marzieh Heidarieh, Atefeh Karimi Pashaki, Katayoon Nofouzi, Marjan Ahrab Farshbafi, Milad Akbari Show preview | PDF (185 K) | Related articles | Related reference work articles Highlights ► Administration of Hilyses® enhanced growth performance in rainbow trout. ► Some enzyme activities in fish mucus were increased by the yeast supplement. ► Skin mucus in treatment group showed strong antibacterial activity. ► Strong agglutination of erythrocytes was observed in fish mucus received Hilyses®.

Protection and antibody response induced by intramuscular DNA vaccine encoding for viral haemorrhagic septicaemia virus (VHSV) G glycoprotein in turbot (Scophthalmus maximus) P. Pereiro, A. Martinez-Lopez, A. Falco, S. Dios, A. Figueras, J.M. Coll, B. Novoa, A. Estepa Show preview | PDF (467 K) | Related articles | Related reference work articles Highlights ► Turbots were vaccinated with a plasmid encoding the cDNA sequence of the gpG of a VHSV isolated from turbot. ► DNA vaccinated turbots were protected against challenge with a pathogenic VHSV strain isolated from turbot. ► DNA vaccinated turbots showed both VHSV-gpG specific and neutralizing antibodies. ► This is the first report showing the efficacy of a turbot DNA vaccine against a VHSV.

Expression analysis of immune response genes in fish epithelial cells following ranavirus infection Riikka Holopainen, Hannele Tapiovaara, Jarno Honkanen Show preview | PDF (1068 K) | Related articles | Related reference work articles Highlights ► We studied immune response to ranavirus infection in fish epithelial cells. ► Fish epithelial cells were infected with four different ranaviruses. ► All four ranaviruses elicited changes in immune gene expression.

Identification of expressed genes in cDNA library of hemocytes from the RLO- challenged oyster, Crassostrea ariakensis Gould with special functional implication of three complement-related fragments (CaC1q1, CaC1q2 and CaC3) Ting Xu, Jiasong Xie, Jianming Li, Ming Luo, Shigen Ye, Xinzhong Wu Show preview | PDF (1690 K) | Supplementary content | Related articles | Related reference work articles Highlights ► We constructed a SMARTer™ cDNA library of hemocytes from RLO-challenged oyster. ► We obtained 96 known genes which categorized into 11 groups and 104 unknown genes. ► We first report two C1qDC genes found in the oyster, Crassostrea ariakensis Gould. ► We first report a complement component 3-like gene in the oyster species. ► Three complement-related genes expression level up-regulated when RLO incubation.

Association of CfLGBP gene polymorphism with disease susceptibility/resistance of Zhikong scallop (Chlamys farreri) to Listonella anguillarum Vinu S. Siva, Chuanyan Yang, Jialong Yang, Lingling Wang, Leilei Wang, Zhi Zhou, Limei Qiu, Linsheng Song Show preview | PDF (764 K) | Related articles | Related reference work articles

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Highlights ► Eight SNP sites were identified in LPS and glucanase binding motif of CfLGBP. ► The mutation of locus +7679 affected PAMP binding activity. ► SNP locus +7679 G/G was associated with disease resistance of scallop. ► A candidate marker for future selection in scallop breeding program.

Differential immune response in the hard clam (mercenaria mercenaria) against bacteria and the protistan pathogen QPX (quahog parasite unknown) Mickael Perrigault, Bassem Allam Show preview | PDF (961 K) | Related articles | Related reference work articles Highlights ► Clam immune response to challenge with bacteria and the protist QPX was investigated. ► We also compared immune responses to QPX in resistant and susceptible clams. ► Different signaling pathways were triggered during bacterial and QPX challenge. ► Link between immune response toward QPX and clam resistance is proposed.

Effects of dietary supplementation of potential probiotic Pseudomonas aeruginosa VSG-2 on the innate immunity and disease resistance of tropical freshwater fish, Labeo rohita Sib Sankar Giri, Shib Sankar Sen, V. Sukumaran Show preview | PDF (397 K) | Related articles | Related reference work articles Highlights ► Effects of dietary probiotics on the innate immunity and disease resistance of Labeo rohita. ► 60 days feeding trial with dietary Pseudomonas aeruginosa at 0, 105, 107, 109 cfu g−l. ► The Probiotics supplementation improves the innate immunity and survival of L. rohita against Aeromonas hydrophila infection. ► Dietary P. aeruginosa VSG-2 administration at 107 cfu g−1 is an optimal dose.

Gene expression and protein levels of thioredoxin in the gills from the whiteleg shrimp (Litopenaeus vannamei) infected with two different viruses: The WSSV or IHHNV Karina D. Garcia-Orozco, Arturo Sanchez-Paz, Emmanuel Aispuro-Hernandez, Silvia Gomez-Jimenez, Alonso Lopez-Zavala, Sandra Araujo-Bernal, Adriana Muhlia-Almazan Show preview | PDF (497 K) | Related articles | Related reference work articles Highlights ► Litopenaeus vannamei thioredoxin mRNA amount is significantly affected by WSSV infection. ► L. vannamei thioredoxin system is active during WSSV infection. ► IHHNV does not affect LvTRX mRNA during infection. ► The dimeric and monomeric forms of LvTRX were detected during WSSV infection. ► The LvTRX dimer on its reduced form was only detected through the IHHNV infectious process.

Inonotus obliquus containing diet enhances the innate immune mechanism and disease resistance in olive flounder Paralichythys olivaceus against Uronema marinum Ramasamy Harikrishnan, Chellam Balasundaram, Moon-Soo Heo Show preview | PDF (344 K) | Related articles | Related reference work articles Highlights ► Innate humoral and cellular responses significantly enhanced in 0.1% and 1.0 diets. ► Lysozyme activity and complement activity significantly increased on weeks 2 and 4. ►

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Serum antiprotease activity and RNS significantly increased in 0.1% and 1.0% diets. ► In 0.1% and 1.0% diets the cumulative mortality low than in 0% and 0.01% diets. ► This study indicates that 0.1% and 1.0% level act as immunostimulatory effect.

Development and efficacy of an attenuated Vibrio harveyi vaccine candidate with cross protectivity against Vibrio alginolyticus Yong-hua Hu, Tian Deng, Bo-guang Sun, Li Sun Show preview | PDF (519 K) | Related articles | Related reference work articles Highlights ► A mutant Vibrio harveyi, T4DM, was derived from the pathogenic V. harveyi strain T4D. ► Compared to T4D, T4DM is highly attenuated in virulence. ► T4DM was examined as injection and immersion vaccines in a flounder model. ► T4DM-induced effective protective immunity against V. harveyi and V. alginolyticus. ► T4DM-induced specific serum IgM enhanced serum bactericidal activity.

Temperature-dependent viral replication and antiviral apoptotic response in viral haemorrhagic septicaemia virus (VHSV)-infected olive flounder (Paralichthys olivaceus) Satheesha Avunje, Wi-Sik Kim, Myung-Joo Oh, Ilsu Choi, Sung-Ju Jung Show preview | PDF (487 K) | Related articles | Related reference work articles Highlights ► VHSV replication and transcription was initially slower at 15 °C than at 20 °C. ► Apoptotic genes expressed high in both the 15 °C and 20 °C group with some time gaps. ► Caspase 3 expressed higher at 20 °C than at 15 °C. ► The individuals with high caspase 3 expression contained very low viral mRNA.

Short Communications

An unexpected loss of domains in the conservative evolution ninth complement component in a higher teleost, Miichthys miiuy Fanxing Meng, Rixin Wang, Tianjun Xu, Yuena Sun, Yuanzhi Cheng, Ge Shi Show preview | PDF (1240 K) | Related articles | Related reference work articles Highlights ► A truncated C9 component cDNA (MimiC9) was cloned from Miichthys miiuy. ► MimiC9 only presents the three domains on the N terminal, lack of the EGF and TSP2 domains. ► MimiC9 was highly expressed in liver. ► C9 of fish and mammals, including MimiC9, is under purifying selection pressure.

A CD83-like molecule in sea bass (Dicentrarchus labrax): Molecular characterization and modulation by viral and bacterial infection Francesco Buonocore, Elisa Randelli, Paola Tranfa, Giuseppe Scapigliati Show preview | PDF (308 K) | Related articles | Related reference work articles Highlights ► We identified CD83 gene from sea bass (Dicentrarchus labrax). ► We determined regulation of CD83 expression after in vitro stimulations. ► We investigated CD83 involvement in viral and bacterial immune responses.

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Description of an Atlantic salmon (Salmo salar L.) type II interleukin-1 receptor cDNA and analysis of interleukin-1 receptor expression in amoebic gill disease- affected fish R.N. Morrison, N.D. Young, B.F. Nowak Show preview | PDF (976 K) | Related articles | Related reference work articles Highlights ► An Atlantic salmon interleukin-1 receptor type II cDNA is described. ► In AGD-affected gills, IL-1β, IL-1RI and IL-1RII mRNA expression was assessed. ► Polarised IL-1β & IL-1RI expression occurs in AGD-affected tissue. ► Down-regulation of IL-1RI may be compensatory for chronic IL-1β over-expression.

Cloning of a heat shock protein 90 (HSP90) gene and expression analysis in the ridgetail white prawn Exopalaemon carinicauda

Pages 1191-1197 Jitao Li, Junying Han, Ping Chen, Zhiqiang Chang, Yuying He, Ping Liu, Qingyin Wang, Jian Li Show preview | PDF (2226 K) | Related articles | Related reference work articles Highlights ► The ridgetail white prawn Exopalaemon carinicauda. ► Molecular cloning of Heat shock protein 90 (HSP90) gene. ► Expression analysis after pH and ammonia-N stress.

A sigma-class glutathione S-transferase from Solen grandis that responded to microorganism glycan and organic contaminants Jialong Yang, Xiumei Wei, Jie Xu, Dinglong Yang, Xiangquan Liu, Jianmin Yang, Jinghui Fang, Xiaoke Hu Show preview | PDF (623 K) | Related articles | Related reference work articles Highlights ► We identified a novel sigma-class GST gene from Solen grandis. ► SgGST-S1 exhibited broad distribution patterns in tissues. ► SgGST-S1 could be induced by microorganism glycan with different levels. ► SgGST-S1 could be significantly induced by organic contaminants. ► SgGST-S1 might be involved in antioxidant process of S. grandis. cDNA microarray analysis of disk abalone genes in gills and hemocytes after viral hemorrhagic septicemia virus (VHSV) challenge Mahanama De Zoysa, Chamilani Nikapitiya, Chulhong Oh, Ilson Whang, Hyun-Jin Shin, Jehee Lee Show preview | PDF (615 K) | Related articles | Related reference work articles Highlights ► cDNA microarray analysis for understanding of differently expressed immune response transcripts. ► VHSV challenge stimulates the transcription of variety of immune response genes. ► Transcriptional profiling permits to select immune response genes for functional studies.

A divalent DNA vaccine based on Sia10 and OmpU induces cross protection against Streptococcus iniae and Vibrio anguillarum in Japanese flounder Yun Sun, Min Zhang, Chun-sheng Liu, Reng Qiu, Li Sun Show preview | PDF (636 K) | Supplementary content | Related articles | Related reference work articles Highlights

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► The DNA vaccines pIDSia10, pIDOmpU, and pSiVa1 were created based on Sia10 and OmpU. ► pIDSia10 and pIDOmpU protected flounder against S. iniae and V. anguillarum respectively. ► pSiVa1 induced cross protection against both S. iniae and V. anguillarum. ► All vaccines induced serum antibody production and enhanced serum bactericidal activity. ► pSiVa1 induced the expression of a wide spectrum of immune genes.

Identification and characterization of a putative lipopolysaccharide-induced TNF-α factor (LITAF) gene from Amphioxus (Branchiostoma belcheri): An insight into the innate immunity of Amphioxus and the evolution of LITAF Ping Jin, Jing Hu, Jinjun Qian, Liming Chen, Xiaofeng Xu, Fei Ma Show preview | PDF (634 K) | Related articles | Related reference work articles Highlights ► LITAF gene was cloned from amphioxus with a 827 bp cDNA transcription product. ► The deduced amino acid of AmphiLITAF shared 37–60% similarity with other species. ► The spatial distribution of the AmphiLITAF in different tissues was different.

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VOLUME 74, PART 6, DECEMBER 2008 Website

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VOLUME 688, JUNE 2012 Website

Research articles Ostracoda: Biostratigraphy and Applied Ecology - Proceedings of the 16th International Symposium on Ostracoda, Brasilia (Brazil), 26-30 July 2009 Guest Editors: Dermeval A. Do Carmo, Ricardo L. Pinto and Koen Martens

Preface: Ostracoda: biostratigraphy and applied ecology Dermeval A. Do Carmo, Ricardo L. Pinto and Koen Martens Download PDF (143.5 KB) View HTML

Sediment penetration depths of epi- and infaunal ostracods from Lake Geneva (Switzerland) Laurent Decrouy, Torsten Walter Vennemann and Daniel Ariztegui Download PDF (423.4 KB) View HTML

Ostracoda (Crustacea) as indicators for surface water quality: a case study from the Ledra River basin (NE Italy) Valentina Pieri, Jochen Vandekerkhove and Daniele Goi Download PDF (322.7 KB) View HTML

Ecological characteristics of the freshwater Ostracoda in Bolu Region (Turkey) Okan Külköylüoğlu and Necmettin Sarı Download PDF (400.6 KB) View HTML Supplemental

Dynamics of pleustonic ostracod populations in small ponds on the Island of Martín García (Río de la Plata, Argentina) R. Liberto, F. Mesquita-Joanes and I. César Download PDF (731.3 KB) View HTML

An invaded invader: high prevalence of entocytherid ostracods on the red swamp crayfish Procambarus clarkii (Girard, 1852) in the Eastern Iberian Peninsula J. A. Aguilar-Alberola, F. Mesquita-Joanes, S. López, A. Mestre and J. C. Casanova, et al. Download PDF (541.7 KB) View HTML

Open Access Distribution of pelagic Ostracoda (Crustacea) inhabiting the waters around Svalbard (Arctic Ocean: 76°36–81°50N) Anna Baczewska, Katarzyna Blachowiak-Samolyk and Martin V. Angel Download PDF (1.1 MB) View HTML

Pliocene coastal palaeomorphology and ostracod faunas of the Bass Strait hinterland, southeast Australia Mark T. Warne and Brent Soutar Download PDF (866.2 KB) View HTML

Late Cretaceous biostratigraphy and paleoenvironmental reconstruction based on non-marine ostracodes from well SK1 (south), Songliao Basin, northeast China Dangpeng Xi, Shun Li, Xiaoqiao Wan, Xia Jing and Qinghua Huang, et al.

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Download PDF (648.8 KB) View HTML

Contribution to the taxonomy, distribution and paleoecology of the early representatives of Penthesilenula Rossetti & Martens, 1998 (Crustacea, Ostracoda, Darwinulidae) from Argentina, with the description of a new species Sara C. Ballent and Analía R. Díaz Download PDF (515.1 KB) View HTML

Open Access Morphology and affinities of Eridostracina: Palaeozoic ostracods with moult retention Ewa Olempska Download PDF (2.4 MB) View HTML

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VOLUME 689, JUNE 2012 Website

Research articles

Pond Research and Management in Europe - Proceedings of the 4th Conference of the European Pond Conservation Network (Berlin 2010) Guest Editors: Dani Boix , Beat Oertli , Régis Céréghino , Thomas Kalettka , Jeremy Biggs and Andrew P. Hull

Pond research and management in Europe: “Small is Beautiful” Dani Boix, Jeremy Biggs, Régis Céréghino, Andrew P. Hull and Thomas Kalettka, et al. Download PDF (243.1 KB) View HTML

Ponds and the importance of their history: an audit of pond numbers, turnover and the relationship between the origins of ponds and their contemporary plant communities in south-east Northumberland, UK M. J. Jeffries Download PDF (335.2 KB) View HTML

Vegetation of Mediterranean temporary pools: a fading jewel? Laïla Rhazi, Patrick Grillas, Er-Riyahi Saber, Mouhssine Rhazi and Luc Brendonck, et al. Download PDF (490.3 KB) View HTML

Colonization in action: genetic characteristics of Daphnia magna Strauss (Crustacea, Anomopoda) in two recently restored ponds Raquel Ortells, Carla Olmo and Xavier Armengol Download PDF (534.1 KB) View HTML

Biological traits of European pond macroinvertebrates Régis Céréghino, Beat Oertli, Marcello Bazzanti, Cristina Coccia and Arthur Compin, et al. Download PDF (418.8 KB) View HTML Supplemental

Grasping the heterogeneity of kettle hole water quality in Northeast Germany G. Lischeid and T. Kalettka Download PDF (732.0 KB) View HTML

Open Access

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Do biogeographic parameters matter? Plant species richness and distribution of macrophytes in relation to area and isolation of ponds in NW Polish agricultural landscape Beata Bosiacka and Paweł Pieńkowski Download PDF (369.2 KB) View HTML

Life-history traits controlling the survival of Tillaea aquatica: a threatened wetland plant species in intensively managed fishpond landscapes of the Czech Republic Kateřina Šumberová, Michal Ducháček and Zdeňka Lososová Download PDF (604.8 KB) View HTML Supplemental

Genetic population structure of the Fire-bellied toad Bombina bombina in an area of high population density: implications for conservation N. Dolgener, C. Schröder, N. Schneeweiss and R. Tiedemann Download PDF (409.8 KB) View HTML Supplemental

Sampling macroinvertebrates in a temporary pond: comparing the suitability of two techniques to detect richness, spatial segregation and diel activity Margarita Florencio, Carmen Díaz-Paniagua, Ivan Gomez-Mestre and Laura Serrano Download PDF (289.5 KB) View HTML Supplemental

Classification trees as a tool for predicting cyanobacterial blooms Anatoly Peretyatko, Samuel Teissier, Sylvia De Backer and Ludwig Triest Download PDF (848.6 KB) View HTML

Strength of phytoplankton–nutrient relationship: evidence from 13 biomanipulated ponds Samuel Teissier, Anatoly Peretyatko, Sylvia De Backer and Ludwig Triest Download PDF (390.6 KB) View HTML

Stabilizing the clear-water state in eutrophic ponds after biomanipulation: submerged vegetation versus fish recolonization Sylvia De Backer, Samuel Teissier and Ludwig Triest Download PDF (496.2 KB) View HTML

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VOLUME 59, ISSUE 1, 2012 Website

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VOLUME 3, ISSUE 1, 2012 Website

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VOLUME 28, ISSUE 3, JUNE 2012 Website

Research articles

Interdisciplinary approaches in fish skeletal biology (pages 297–299) P. Eckhard Witten and M. Leonor Cancela Abstract Full Article (HTML) PDF(146K) References

500,000 fish phenotypes: The new informatics landscape for evolutionary and developmental biology of the vertebrate skeleton (pages 300–305) P. Mabee, J. P. Balhoff, W. M. Dahdul, H. Lapp, P. E. Midford, T. J. Vision and M. Westerfield Abstract Full Article (HTML) PDF(242K) References

Comparative genetics of postembryonic development as a means to understand evolutionary change (pages 306–315) M. P. Harris Abstract Full Article (HTML) PDF(881K) References

Interrelationship and modularity of notochord and somites: a comparative view on zebrafish and chicken vertebral body development (pages 316–319) T. P. de Azevedo, P. E. Witten, A. Huysseune, A. Bensimon-Brito, C. Winkler, T. T. To and I. Palmeirim Abstract Full Article (HTML) PDF(154K) References

The structure-mechanics relationship and the response to load of the acellular bone of neoteleost fish: a review (pages 320–329) M. N. Dean and R. Shahar Abstract Full Article (HTML) PDF(782K) References

The pattern of the lower jaw dentition in farmed Atlantic salmon (Salmo salar): a tool to study mechanisms of tooth replacement? (pages 330–335) A. Huysseune, S. Vandenplas, B. De Groeve, P.G. Fjelldal and T. Hansen Abstract Full Article (HTML) PDF(578K) References

Dual BrdU-PCNA immunodetection of proliferative cells in dental and orofacial tissues of teleosts (pages 336–340) S. Vandenplas, M. Willems and A. Huysseune Abstract Full Article (HTML) PDF(876K) References

A timeline of pharyngeal endoskeletal condensation and differentiation in the shark, Scyliorhinus canicula, and the paddlefish, Polyodon spathula (pages 341– 345) J. A. Gillis, M. S. Modrell and C. V. H. Baker Abstract Full Article (HTML) PDF(5240K) References

Understanding morphology: a comparative study on the lower jaw in two teleost species (pages 346–352) B Milligan, N Harris and T. A. Franz-Odendaal Abstract Full Article (HTML) PDF(1031K) References

Model teleosts for the study of idiopathic-type spinal curvatures: potential biomedical applications (pages 353–359)

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K. F. Gorman, K. Pohl, F. Ali, K. Bandwait and F. Breden Abstract Full Article (HTML) PDF(574K) References

Osterix:nlGFP transgenic medaka identify regulatory roles for retinoic acid signaling during osteoblast differentiation in vivo (pages 360–363) J. Renn and C. Winkler Abstract Full Article (HTML) PDF(671K) References

All four twist genes of zebrafish have partially redundant, but essential, roles in patterning the craniofacial skeleton (pages 364–371) I. Germanguz and I. Gitelman Abstract Full Article (HTML) PDF(1251K) References

Comparative gene promoter analysis: an in silico strategy to identify candidate regulatory factors for Gla Rich Protein (pages 372–376) N. Conceição, C. Fazenda and M. L. Cancela Abstract Full Article (HTML) PDF(260K) References

Molecular characterization of two paralog genes encoding Gla-rich protein (Grp) in zebrafish (pages 377–381) C. Fazenda, I. A. L. Silva, M. L. Cancela and N. Conceição Abstract Full Article (HTML) PDF(569K) References

Elasmoid scales of fishes as model in biomedical bone research (pages 382–387) J. R. Metz, E. de Vrieze, E.-J. Lock, I. E. Schulten and G. Flik Abstract Full Article (HTML) PDF(529K) References

Evidence for a hydroxyapatite precursor in regenerating cyprinid scales (pages 388–392) E. de Vrieze, L. Heijnen, J. R. Metz and G. Flik Abstract Full Article (HTML) PDF(497K) References

Body size determines the number of scales in cyprinid fishes as inferred from hormonal manipulation of developmental rate (pages 393–397) B. A. Levin, A. A. Bolotovskiy and M. A. Levina Abstract Full Article (HTML) PDF(410K) References

Thyroid hormone in skeletal development of cyprinids: effects and morphological consequences (pages 398–405) F. N. Shkil, D. V. Kapitanova, V. B. Borisov, B. Abdissa and S. V. Smirnov Abstract Full Article (HTML) PDF(5926K) References

Heterochronies in skull development of Lake Tana large African barbs (Labeobarbus; Cyprinidae; Teleostei) (pages 406–410) S. V. Smirnov, V. B. Borisov, D. V. Kapitanova, B. Abdissa and F. N. Shkil Abstract Full Article (HTML) PDF(590K) References

The effect of dietary arachidonic acid during the Artemia feeding period on larval growth and skeletogenesis in Senegalese sole, Solea senegalensis (pages 411–418) A. Boglino, M. J. Darias, A. Estévez, K. B. Andree and E. Gisbert Abstract Full Article (HTML) PDF(504K) References

Vitamin A effects on vertebral bone tissue homeostasis in gilthead sea bream (Sparus aurata) juveniles (pages 419–426)

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I. Fernández, J. B. Ortiz-Delgado, C. Sarasquete and E. Gisbert Abstract Full Article (HTML) PDF(1144K) References

Polyunsaturated fatty acids regulate cell proliferation, extracellular matrix mineralization and gene expression in a gilthead seabream skeletal cell line (pages 427–432) M. N. Viegas, J. Dias, M. L. Cancela and V. Laizé Abstract Full Article (HTML) PDF(478K) References

Vertebral deformities in farmed Atlantic salmon (Salmo salar L.) – etiology and pathology (pages 433–440) P. G. Fjelldal, T. Hansen, O. Breck, R. Ørnsrud, E.-J. Lock, R. Waagbø, A. Wargelius and P. Eckhard Witten Abstract Full Article (HTML) PDF(324K) References

Advantages and limitations of X-ray and computed tomography systems for the study of the skeleton in meagre (Argyrosomus regius) (pages 441–445) E. Gisbert, M. J. Darias and M. Font-i-Furnols Abstract Full Article (HTML) PDF(1463K) References

Vaccinated farmed Atlantic salmon are susceptible to spinal and skull deformities (pages 446–452) A. Berg, A. Yurtseva, T. Hansen, D. Lajus and P. G. Fjelldal Abstract Full Article (HTML) PDF(478K) References

Four stages characterizing vertebral fusions in Atlantic salmon (pages 453–459) E. Ytteborg, J. Torgersen, G. Baeverfjord and H. Takle Abstract Full Article (HTML) PDF(1311K) References

Lordotic-kyphotic vertebrae develop ectopic cartilage-like tissue in Senegalese sole (Solea senegalensis) (pages 460–463) J. Cardeira, A. Bensimon-Brito, P. Pousão-Ferreira, M. L. Cancela and P. J. Gavaia Abstract Full Article (HTML) PDF(546K) References

Osteology of the axial and appendicular skeletons of the meagre Argyrosomus regius (Sciaenidae) and early skeletal development at two rearing facilities (pages 464–470) J. Cardeira, R. Vallés, G. Dionísio, A. Estévez, E. Gisbert, P. Pousão-Ferreira, M. L. Cancela and P. J. Gavaia Abstract Full Article (HTML) PDF(614K) References

Effect of egg incubation temperature on the occurrence of skeletal deformities in Solea senegalensis (pages 471–476) G. Dionísio, C. Campos, L. M. P. Valente, L. E. C. Conceição, M. L. Cancela and P. J. Gavaia Abstract Full Article (HTML) PDF(366K) References

Impact of dietary protein hydrolysates on skeleton quality and proteome in Diplodus sargus larvae (pages 477–487) M. de Vareilles, N. Richard, P. J. Gavaia, T. S. Silva, O. Cordeiro, I. Guerreiro, M. Yúfera, I. Batista, C. Pires, P. Pousão-Ferreira, P. M. Rodrigues, I. Rønnestad, K. E. Fladmark and L. E. C. Conceição Abstract Full Article (HTML) PDF(478K) References

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Article first published online: 21 MAY 2012 | DOI: 10.1111/j.1439-0426.2012.01995.x This article corrects: Management approaches and aquaculture of sturgeons in the Lower Danube region countries Vol. 27, Issue Supplement s3, 94–100, Article first published online: 6 DEC 2011 Abstract Full Article (HTML) PDF(106K)

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VOLUME112, PART 5, MAY 2012 Website

Research articles

Review

Silver nanoparticles: the powerful nanoweapon against multidrug-resistant bacteria (pages 841–852) M.K. Rai, S.D. Deshmukh, A.P. Ingle and A.K. Gade Abstract Full Article (HTML) PDF(210K) References

Original articles

Two-dimensional proteome reference map of Vibrio tapetis, the aetiological agent of brown ring disease in clams (pages 853–864) J. Bermúdez-Crespo, S. Balboa, J. Alonso and J.L. Romalde Abstract Full Article (HTML) PDF(970K) References Supporting Information

Gliotoxin contamination in and pre- and postfermented corn, sorghum and wet brewer’s grains silage in Sao Paulo and Rio de Janeiro State, Brazil (pages 865– 873) L.A.M. Keller, K.M. Keller, M.P. Monge, C.M. Pereyra, V.A. Alonso, L.R. Cavaglieri, S.M. Chiacchiera and C.A. R Rosa Abstract Full Article (HTML) PDF(229K) References

Biodefence

Laboratory evaluation of large-scale decontamination approaches (pages 874– 882) M.W. Calfee, S.P. Ryan, J.P. Wood, L. Mickelsen, C. Kempter, L. Miller, M. Colby, A. Touati, M. Clayton, N. Griffin-Gatchalian, S. McDonald and R. Delafield Abstract Full Article (HTML) PDF(218K) References

Biodegradation/Bioremediation

Alkaline extracellular reduction: isolation and characterization of an alkaliphilic and halotolerant bacterium, Bacillus pseudofirmus MC02 (pages 883–891) C. Ma, L. Zhuang, S.G. Zhou, G.Q. Yang, Y. Yuan and R.X. Xu Abstract Full Article (HTML) PDF(588K) References

Removal of patulin from apple juice using inactivated lactic acid bacteria (pages 892–899) S. Hatab, T. Yue and O. Mohamad Abstract Full Article (HTML) PDF(491K) References

Biotechnology

Biodegradation of kraft lignin by a bacterial strain Comamonas sp. B-9 isolated from eroded bamboo slips (pages 900–906) Y.H. Chen, L.Y. Chai, Y.H. Zhu, Z.H. Yang, Y. Zheng and H. Zhang Abstract Full Article (HTML) PDF(261K) References

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Environmental Microbiology

Positive and negative selection towards tetracycline resistance genes in manure treatment lagoons (pages 907–919) A.L. Barkovskii, K.M. Manoylov and C. Bridges Abstract Full Article (HTML) PDF(732K) References

Transient gut retention and persistence of Salmonella through metamorphosis in the lesser mealworm, Alphitobius diaperinus (Coleoptera: Tenebrionidae) (pages 920–926) T.L. Crippen, L. Zheng, C.L. Sheffield, J.K. Tomberlin, R.C. Beier and Z. Yu Abstract Full Article (HTML) PDF(151K) References

Heat inactivation of Salmonella spp. in fresh poultry compost by simulating early phase of composting process (pages 927–935) R. Singh, J. Kim and X. Jiang Abstract Full Article (HTML) PDF(584K) References

Food Microbiology

Effect of must characteristics on the diversity of Saccharomyces strains and their prevalence in spontaneous fermentations (pages 936–944) P. Blanco, J.M. Mirás-Avalos and I. Orriols Abstract Full Article (HTML) PDF(747K) References

Physiology

Viability kinetics, induction, resuscitation and quantitative real-time polymerase chain reaction analyses of viable but nonculturable Vibrio cholerae O1 in freshwater microcosm (pages 945–953) A. Mishra, N. Taneja and M. Sharma Abstract Full Article (HTML) PDF(394K) References

Plant Microbiology/Plant Health Microbiology

Formulation development of the biocontrol agent Bacillus subtilis strain CPA-8 by spray-drying (pages 954–965) V. Yánez-Mendizábal, I. Viñas, J. Usall, R. Torres, C. Solsona, M. Abadias and N. Teixidó Abstract Full Article (HTML) PDF(820K) References

Nontarget effects of foliar fungicide application on the rhizosphere: diversity of nifH gene and nodulation in chickpea field (pages 966–974) C. Yang, C. Hamel, V. Vujanovic and Y. Gan Abstract Full Article (HTML) PDF(400K) References

Pre-and Probiotics/Intestinal Microbiology

The potential of bifidobacteria as a source of natural folate (pages 975–984) M.R. D’Aimmo, P. Mattarelli, B. Biavati, N.G. Carlsson and T. Andlid Abstract Full Article (HTML) PDF(533K) References

Public Health Microbiology

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Outer membrane defect and stronger biofilm formation caused by inactivation of a gene encoding for heptosyltransferase I in Cronobacter sakazakii ATCC BAA-894 (pages 985–997) L. Wang, X. Hu, G. Tao and X. Wang Abstract Full Article (HTML) PDF(579K) References

Development and application of a polymicrobial, in vitro, wound biofilm model (pages 998–1006) J. Woods, L. Boegli, K.R. Kirker, A.M. Agostinho, A.M. Durch, E. deLancey Pulcini, P.S. Stewart and G.A. James Abstract Full Article (HTML) PDF(503K) References

Distribution and decline of human pathogenic bacteria in soil after application in irrigation water and the potential for soil-splash-mediated dispersal onto fresh produce (pages 1007–1019) J.M. Monaghan and M.L. Hutchison Abstract Full Article (HTML) PDF(336K) References

Antimicrobial effect and mode of action of terpeneless cold-pressed Valencia orange essential oil on methicillin-resistant Staphylococcus aureus (pages 1020– 1033) A. Muthaiyan, E.M. Martin, S. Natesan, P.G. Crandall, B.J. Wilkinson and S.C. Ricke Abstract Full Article (HTML) PDF(263K) References Supporting Information

Chitosan: antimicrobial action upon staphylococci after impregnation onto cotton fabric (pages 1034–1041) F.K. Tavaria, J.C. Soares, I.L. Reis, M.H. Paulo, F.X. Malcata and M.E. Pintado Abstract Full Article (HTML) PDF(502K) References

Prevalence, phenotypic traits and molecular characterization of emetic toxin- producing Bacillus cereus strains isolated from human stools in Korea (pages 1042–1049) J.W. Chon, J.H. Kim, S.J. Lee, J.Y. Hyeon, K.Y. Song, C. Park and K.-H. Seo Abstract Full Article (HTML) PDF(173K) References

Thermal stability of structurally different viruses with proven or potential relevance to food safety (pages 1050–1057) E. Tuladhar, M. Bouwknegt, M.H. Zwietering, M. Koopmans and E. Duizer Abstract Full Article (HTML) PDF(293K) References

Corrigendum

Corrigendum (page 1058) Article first published online: 12 MAR 2012 | DOI: 10.1111/j.1365-2672.2012.05266.x This article corrects: Use of zero-valent iron biosand filters to reduce Escherichia coli O157:H12 in irrigation water applied to spinach plants in a field setting Vol. 112, Issue 3, 551–560, Article first published online: 11 JAN 2012 Abstract Full Article (HTML) PDF(52K) References

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VOLUME112, PART 6, JUNE 2012 Website

Research articles

Review

The impact of temperature on the inactivation of enteric viruses in food and water: a review (pages 1059–1074) I. Bertrand, J.F. Schijven, G. Sánchez, P. Wyn-Jones, J. Ottoson, T. Morin, M. Muscillo, M. Verani, A. Nasser, A.M. de Roda Husman, M. Myrmel, J. Sellwood, N. Cook and C. Gantzer Abstract Full Article (HTML) PDF(380K) References

Orginal articles

Overexpression of mltA in Edwardsiella tarda reduces resistance to antibiotics and enhances lethality in zebra fish (pages 1075–1085) W. Liu, N. Dong and X.-H. Zhang Abstract Full Article (HTML) PDF(377K) References

Biodegradation/Bioremediation

Arthrospira platensis biomass with high protein content cultivated in continuous process using urea as nitrogen source (pages 1086–1094) I. Avila-Leon, M. Chuei Matsudo, S. Sato and J.C.M. de Carvalho Abstract Full Article (HTML) PDF(312K) References

Biotechnology

Improvement of A21978C production in Streptomyces roseosporus by reporter- guided rpsL mutation selection (pages 1095–1101) L. Wang, Y. Zhao, Q. Liu, Y. Huang, C. Hu and G. Liao Abstract Full Article (HTML) PDF(258K) References

Environmental Microbiology

New bacilli from shallow hydrothermal vents of Panarea Island (Italy) and their biotechnological potential (pages 1102–1112) C. Gugliandolo, V. Lentini, A. Spanò and T.L. Maugeri Abstract Full Article (HTML) PDF(840K) References

Detection of class 1 integrons in Salmonella Weltevreden and silent antibiotic resistance genes in some seafood-associated nontyphoidal isolates of Salmonella in south-west coast of India (pages 1113–1122) V.K. Deekshit, B.K. Kumar, P. Rai, S. Srikumar, I. Karunasagar and I. Karunasagar Abstract Full Article (HTML) PDF(285K) References

Characterization of a mobile and multiple resistance plasmid isolated from swine manure and its detection in soil after manure application (pages 1123– 1133) T.O. Rahube and C.K. Yost Abstract Full Article (HTML) PDF(608K) References Supporting Information

Food Microbiology

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Molecular analysis of the bacterial communities in the live Pacific oyster (Crassostrea gigas) and the influence of postharvest temperature on its structure (pages 1134–1143) J. Fernandez-Piquer, J.P. Bowman, T. Ross and M.L. Tamplin Abstract Full Article (HTML) PDF(667K) References

Effective inactivation of food pathogens Listeria monocytogenes and Salmonella enterica by combined treatment of hypericin-based photosensitization and high power pulsed light (pages 1144–1151) K. Kairyte, S. Lapinskas, V. Gudelis and Z. Luksiene Abstract Full Article (HTML) PDF(551K) References

Methods

Characterization of rumen bacterial diversity and fermentation parameters in concentrate fed cattle with and without forage (pages 1152–1162) R.M. Petri, R.J. Forster, W. Yang, J.J. McKinnon and T.A. McAllister Abstract Full Article (HTML) PDF(488K) References

Mycology

Evaluation of Candida albicans adhesion and biofilm formation on a denture base acrylic resin containing silver nanoparticles (pages 1163–1172) A.F. Wady, A.L. Machado, V. Zucolotto, C.A. Zamperini, E. Berni and C.E. Vergani Abstract Full Article (HTML) PDF(952K) References

Physiology

Effect of pluronic acid F-127 on the toxicity towards eukaryotic cells of CSA-13, a cationic steroid analogue of antimicrobial peptides (pages 1173–1183) C. Nagant, P.B. Savage and J.P. Dehaye Abstract Full Article (HTML) PDF(1168K) References

Pre-and Probiotics/Intestinal Microbiology

Cell viability and immunostimulating and protective capacities of Bifidobacterium longum 51A are differentially affected by technological variables in fermented milks (pages 1184–1192) T.C. Souza, M.F. Zacarías, A.M. Silva, A. Binetti, J. Reinheimer, J.R. Nicoli and G. Vinderola Abstract Full Article (HTML) PDF(295K) References

Characterization of lactic acid bacteria-based probiotics as potential heavy metal sorbents (pages 1193–1206) J.N. Bhakta, K. Ohnishi, Y. Munekage, K. Iwasaki and M.Q. Wei Abstract Full Article (HTML) PDF(1067K) References

Public Health Microbiology

Dissemination of ceftazidime-resistant Acinetobacter baumannii clonal complex 92 in Korea (pages 1207–1211) Y. Lee, I.K. Bae, J. Kim, S.H. Jeong and K. Lee Abstract Full Article (HTML) PDF(140K) References

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Inhibitory effects of silver ions on Legionella pneumophila grown on agar, intracellular in Acanthamoeba castellanii and in artificial biofilms (pages 1212– 1219) C. Unger and C. Lück Abstract Full Article (HTML) PDF(330K) References

Bacterial water quality and network hydraulic characteristics: a field study of a small, looped water distribution system using culture-independent molecular methods (pages 1220–1234) R. Sekar, P. Deines, J. Machell, A.M. Osborn, C.A. Biggs and J.B. Boxall Abstract Full Article (HTML) PDF(709K) References

Staphylococcus aureus biofilm formation and antibiotic susceptibility tests on polystyrene and metal surfaces (pages 1235–1243) D.C. Coraça-Huber, M. Fille, J. Hausdorfer, K. Pfaller and M. Nogler Abstract Full Article (HTML) PDF(768K) References

Development of a new CARD-FISH protocol for quantification of Legionella pneumophila and its application in two hospital cooling towers (pages 1244– 1256) A.K.T. Kirschner, A. Rameder, B. Schrammel, A. Indra, A.H. Farnleitner and R. Sommer Abstract Full Article (HTML) PDF(501K) References

Occurrence of Cronobacter spp. in retail foods (pages 1257–1265) I. Hochel, H. Růžičková, L. Krásný and K. Demnerová Abstract Full Article (HTML) PDF(128K) References

Genotypic and phenotypic characterization of Bordetella pertussis strains used in different vaccine formulations in Latin America (pages 1266–1276) D. Bottero, M.E. Gaillard, L.A. Basile, M. Fritz and D.F. Hozbor Abstract Full Article (HTML) PDF(218K) References Supporting Information

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VOLUME 24, PART 3, JUNE 2012 Website

Research articles Special Issue: 4th Congress, International Society for Applied Phycology, Halifax Guest Editors: Alan T. Critchley , Roberto De Philippis and Stephen J.B. O'Leary

Utilization of algal materials for nutraceutical and cosmeceutical applications— what do manufacturers need to know? Kevin W. Gellenbeck Download PDF (105.1 KB) View HTML

Microalgae mass culture: the constraints of scaling-up Johan U. Grobbelaar Download PDF (105.1 KB) View HTML

Outdoor cultivation of Chlamydomonas reinhardtii for photobiological hydrogen production Stephanie C. Geier, Sabine Huyer, Konstantin Praebst, Moritz Husmann and Christian Walter, et al. Download PDF (453.0 KB) View HTML

Hectare-scale demonstration of high rate algal ponds for enhanced wastewater treatment and biofuel production Rupert Craggs, Donna Sutherland and Helena Campbell Download PDF (521.4 KB) View HTML

Mixotrophic and photoautotrophic cultivation of 14 microalgae isolates from Saskatchewan, Canada: potential applications for wastewater remediation for biofuel production Kyoung C. Park, Crystal Whitney, Jesse C. McNichol, Kathryn E. Dickinson and Scott MacQuarrie, et al. Download PDF (350.0 KB) View HTML

Appraisal of a horizontal two-phase flow photobioreactor for industrial production of delicate microalgae species A. Muller-Feuga, M. Lemar, E. Vermel, R. Pradelles and L. Rimbaud, et al. Download PDF (294.7 KB) View HTML

Simulated cell trajectories in a stratified gas–liquid flow tubular photobioreactor Annelie K. Moberg, Gary K. Ellem, Graeme J. Jameson and Joseph G. Herbertson Download PDF (339.9 KB) View HTML

Screening for a low-cost Haematococcus pluvialis medium reveals an unexpected impact of a low N/P ratio on vegetative growth Pierre Tocquin, Anthony Fratamico and Fabrice Franck Download PDF (527.4 KB) View HTML

Isolation and characterization of a Scenedesmus acutus strain to be used for bioremediation of urban wastewater E. Doria, P. Longoni, L. Scibilia, N. Iazzi and R. Cella, et al. Download PDF (397.6 KB) View HTML

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On-land cultivation of functional seaweed products for human usage Jeff T. Hafting, Alan T. Critchley, M. Lynn Cornish, Scott A. Hubley and Allan F. Archibald Download PDF (154.3 KB) View HTML

Development of Saccharina latissima (Phaeophyceae) kelp hatcheries with year- round production of zoospores and juvenile sporophytes on culture ropes for kelp aquaculture Silje Forbord, Jorunn Skjermo, Johanne Arff, Aleksander Handå and Kjell Inge Reitan, et al. Download PDF (394.6 KB) View HTML

Cultivation of a hybrid of free-living gametophytes between Undariopsis peterseniana and Undaria pinnatifida: morphological aspects and cultivation period Eun Kyoung Hwang, Yong Gun Gong and Chan Sun Park Download PDF (377.8 KB) View HTML

Management and production of the brown algae Ascophyllum nodosum in the Canadian maritimes Raul Ugarte and Glyn Sharp Download PDF (379.8 KB) View HTML

The Lessonia nigrescens fishery in northern Chile: “how you harvest is more important than how much you harvest” Julio A. Vásquez, Nicole Piaget and J. M. Alonso Vega Download PDF (836.0 KB) View HTML

Extract powder from the brown alga Ascophyllum nodosum (Linnaeus) Le Jolis (AMPEP): a “vaccine-like” effect on Kappaphycus alvarezii (Doty) Doty ex P.C. Silva Rafael Rodrigues Loureiro, Renata Perpetuo Reis, Flávia Diniz Berrogain and Alan T. Critchley Download PDF (150.9 KB) View HTML

Seasonality of epiphytic development of the hydroid Obelia geniculata on cultivated Saccharina japonica (Laminariaceae, Phaeophyta) in Korea Chan Sun Park and Eun Kyoung Hwang Download PDF (325.6 KB) View HTML

Bioremediation potential of Chondrus crispus (Basin Head) and Palmaria palmata: effect of temperature and high nitrate on nutrient removal P. Corey, J. K. Kim, D. J. Garbary, B. Prithiviraj and J. Duston Download PDF (305.1 KB) View HTML

Cultivation of Ulva lactuca with manure for simultaneous bioremediation and biomass production Mette Møller Nielsen, Annette Bruhn, Michael Bo Rasmussen, Birgit Olesen and Martin M. Larsen, et al. Download PDF (346.4 KB) View HTML

Variation in the chemical composition of Capsosiphon fulvescens with area and during the harvest period Sang-Mi Sun, Se-Yeong Cho, Tai-Sun Shin, Gyu-Hwa Chung and Chang-Bum Ahn, et al. Download PDF (204.9 KB) View HTML

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Impacts of glyphosate on photosynthetic behaviors in Kappaphycus alvarezii and Neosiphonia savatieri detected by JIP-test Tong Pang, Jianguo Liu, Qian Liu, Litao Zhang and Wei Lin Download PDF (380.1 KB) View HTML

Myrionema strangulans (Chordariales, Phaeophyceae) epiphyte on Ulva spp. (Ulvophyceae) from Patagonian Atlantic coasts Amira Gabriela Siniscalchi, María Cecilia Gauna, Eduardo J. Cáceres and Elisa R. Parodi Show SummaryHide Summary Download PDF (1.3 MB) View HTML

Deep-water rhodolith productivity and growth in the southwestern Atlantic M. A. O. Figueiredo, R. Coutinho, A. B. Villas-Boas, F. T. S. Tâmega and R. Mariath Download PDF (251.5 KB) View HTML

Ploidy determination of three Kappaphycus alvarezii strains (Rhodophyta, Gigartinales) by confocal fluorescence microscopy Carmen S. Zitta, Eliana M. Oliveira, Zenilda L. Bouzon and Leila Hayashi Download PDF (229.1 KB) View HTML

EST-SSR markers derived from Laminaria digitata and its transferable application in Saccharina japonica Fuli Liu, Feijiu Wang and Delin Duan Download PDF (128.2 KB) View HTML

The stable isotope of nitrogen in an experimental culture of Ulva spp. and its assimilation in the nutrition of white shrimp Litopenaeus vannamei, Baja California Sur, Mexico A. Sánchez, I. Sánchez-Rodríguez and M. Casas-Valdez Download PDF (203.5 KB) View HTML

Extraction and bioautographic-guided separation of antibacterial compounds from Ulva lactuca Shiau Pin Tan, Laurie O’Sullivan, Maria Luz Prieto, Gillian E. Gardiner and Peadar G. Lawlor, et al. Download PDF (1.8 MB) View HTML

Jania rubens-associated bacteria: molecular identification and antimicrobial activity A. Ismail-Ben Ali, M. El Bour, L. Ktari, H. Bolhuis and M. Ahmed, et al. Download PDF (347.0 KB) View HTML

Profiling whole microalgal cells by high-resolution magic angle spinning (HR- MAS) magnetic resonance spectroscopy Nadine Merkley and Raymond T. Syvitski Download PDF (147.6 KB) View HTML

Raman microspectroscopy of algal lipid bodies: β-carotene quantification Zdeněk Pilát, Silvie Bernatová, Jan Ježek, Mojmír Šerý and Ota Samek, et al. Download PDF (248.1 KB) View HTML

Pilot-scale supercritical carbon dioxide extractions for the recovery of triacylglycerols from microalgae: a practical tool for algal biofuels research W. J. Bjornsson, K. M. MacDougall, J. E. Melanson, S. J. B. O’Leary and P. J. McGinn

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Download PDF (369.1 KB) View HTML

Evaluation of Moringa oleifera seed flour as a flocculating agent for potential biodiesel producer microalgae Cláudia Maria Luz Lapa Teixeira, Fabiana Vasconcelos Kirsten and Pedro Celso Nogueira Teixeira Download PDF (203.6 KB) View HTML

Factors affecting the microbial digestion of an industrial seaweed-based residue Juncal Nogales, Mary Concannon and Michael Hall Download PDF (397.3 KB) View HTML

Open Access Dietary algae and HIV/AIDS: proof of concept clinical data J. Teas and M. R. Irhimeh Download PDF (256.4 KB) View HTML

Detection of immunoactive insulin in Spirulina Razique Anwer, Saima Khursheed and Tasneem Fatma Download PDF (543.3 KB) View HTML n-3 Fatty acid content in eggs laid by hens fed with marine algae and sardine oil and stored at different times and temperatures Silvia Carrillo, Victor Hugo Ríos, Concepción Calvo, María Elena Carranco and Margarita Casas, et al. Download PDF (160.5 KB) View HTML

Investigation of the application of Acadian Marine Plant Extract Powder (AMPEP) to enhance the growth, phenolic content, free radical scavenging, and iron chelating activities of Kappaphycus Doty (Solieriaceae, Gigartinales, Rhodophyta) Anicia Q. Hurtado, Munib Joe, Roman C. Sanares, Di Fan and Balakrishnan Prithiviraj, et al. Download PDF (631.6 KB) View HTML

Nutritional value of some algae from the north-western Mediterranean coast of Egypt N. G. Shams El Din and Z. M. El-Sherif Download PDF (432.9 KB) View HTML

Algal eating habits of phycologists attending the ISAP Halifax Conference and members of the general public Maeve D. Edwards, Susan Løvstad Holdt and Stephen Hynes Download PDF (368.6 KB) View HTML

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VOLUME 3, PART 1, MARCH 2012 Website

Research articles

Resistance Determinants of Pseudomonas Species from Aquaculture in Australia Olasumbo L Ndi and Mary D Barton

Use of Ultraviolet C (UVC) Radiation to Inactivate Infectious Hematopoietic Necrosis Virus (IHNV) and Viral Hemorrhagic Septicemia Virus (VHSV) in Fish Processing Plant Effluent Luis OB Afonso, Zina Richmond, Alexandra A Eaves, Jon Richard, Laura M Hawley and Kyle A Garver

Effect of Different Organic Manures on the Growth of Screw Vallisneria, Vallisneria spiralis Linne 1753 Shelar GS, Dhaker HD, Pathan DI and Shirdhankar MM

Atypical Chytridiomyces Fungal Infection in Cultured Macrobrachium rosenbergii in India Ambrose Paulraj, José Vitor Lima-Filho, Kareem Altaff and Silvio Peixoto

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VOLUME 3, PART 2, APRIL 2012 Website

Research articles

Antibiotic Resistance of the Genus Aeromonas Spp Saavedra MJ

Biodiversity and Adaptability of Holothuria leucospilota and Stichopus japonicus Sea Cucumber Species in Artificial Environment Abdoulie Ceesay, Mariana Nor Shamsudin, Norfarrah Mohammed Alipiah and Intan Safinar Ismail

Effects of Aquaculture Researchers’ Job Characteristics on Linkage Activities in Nigeria J.B Ogunremi, E.O Faturoti and O.I Oladele

Use of Yeast-Fermented Canola Meal to Replace Fishmeal in the Diet of Asian Sea Bass Lates Calcarifer (Bloch, 1790) Pichet Plaipetch and Amararatne Yakupitiyage

Assessing Consumption of Bioactive Micro-Particles by Filter-Feeding Asian Carp Nathan R Jensen, Jon J Amberg, James A Luoma, Liza R Walleser and Mark P Gaikowski

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JJJooouuurrrnnnaaalll ooofff EEExxxpppeeerrriiimmmeeennntttaaalll MMMaaarrriiinnneee BBBiiioolllooogggyyy aaannnddd EEEcccooolllooogggyyy

VOLUME 418-419, MAY 2012 Website

Research articles The effects of small fish presence on a species-poor community dominated by omnivores: Example of a size-based trophic cascade J. Compte, S. Gascón, X.D. Quintana, D. Boix Show preview | PDF (1131 K) | Related articles | Related reference work articles Highlights ► A small fish produces a trophic cascade on plankton of a Mediterranean salt marsh. ► Omnivory has an important role in these food webs. ► The trophic cascade is a result of size-dependent interactions amongst organisms. ► Aphanius iberus has weak but positive effect on macrophyte biomass.

Effect of the mud snail Ilyanassa obsoleta on vital rates of the intertidal amphipod Corophium volutator Michael R.S. Coffin, Myriam A. Barbeau, Diana J. Hamilton, David Drolet Show preview | PDF (1335 K) | Related articles | Related reference work articles Highlights ► Mud snail interactions with amphipods on mudflats in Bay of Fundy, Canada. ► Snails negatively affect amphipod survival and juvenile growth. ► Snails are opportunistic predators of amphipods and other species. ► Snail attack methods vary and have implications for gastropods in other systems.

Formation of triacylglycerol in Nitzschia closterium f. minutissima under nitrogen limitation and possible physiological and biochemical mechanisms Wenhua Liu, Zhongwen Huang, Ping Li, Jinfeng Xia, Bin Chen Show preview | PDF (929 K) | Related articles | Related reference work articles Research Highlights ► This paper investigated triacylglycerol accumulation in N. closterium; ► low nitrogen causes significant decrease in chl a and photosynthesis efficiency; ► the soluble protein decreased at low nitrogen concentration; ► ROS of all treatments increased largely at stationary phase; ► accumulation of TAG seems to be a protective mechanism.

Ocean acidification induces multi-generational decline in copepod naupliar production with possible conflict for reproductive resource allocation Susan C. Fitzer, Gary S. Caldwell, Andrew J. Close, Anthony S. Clare, Robert C. Upstill- Goddard, Matthew G. Bentley Show preview | PDF (595 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Ocean acidification impacts on copepod reproduction. ► Multi-generations of copepod naupliar production have been modelled. ► Ocean acidification induces decline in copepod reproduction and development. ► Changes in copepod growth imply reallocation of resources to reproduction. ► Ocean acidification may drive shifts in copepod life history strategies.

Bacterial and phytoplankton nutrient limitation in tropical marine waters, and a coastal lake in Brazil Aquaculture Journals Page: 107 of 169

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Per Carlsson, Edna Granéli, Wilhelm Granéli, Eliane Gonzalez Rodriguez, Wanderson Fernandes de Carvalho, Andreas Brutemark, Elin Lindehoff Show preview | PDF (493 K) | Related articles | Related reference work articles Highlights ► Phytoplankton and bacterial nutrient limitation was investigated in tropical waters. ► Phytoplankton and bacteria may compete for a common resource (P) in a tropical lake. ► Phytoplankton and bacteria can be limited by different nutrients in marine waters. ► Phytoplankton and bacteria do not necessarily compete for the same nutrient.

Multi-generation cultivation of the copepod Calanus helgolandicus in a re- circulating system Ylenia Carotenuto, Francesco Esposito, Fabio Pisano, Chiara Lauritano, Massimo Perna, Antonio Miralto, Adrianna Ianora Show preview | PDF (1245 K) | Related articles | Related reference work articles Highlights ► The copepod Calanus helgolandicus was mass cultivated in a large volume system. ► A mixed diet of flagellates and the diatom Thalassiosira weissflogii was supplied. ► The highest population growth rate (0.067 d–1) was related to the use of the diatom. ► Addition of the diatom for > 3 months reduced egg viability and population growth.

Species and size matter: An experimental study of microhabitat use under the influence of competitive interactions in intertidal gobiids Seiji Arakaki, Mutsunori Tokeshi Show preview | PDF (1173 K) | Related articles | Related reference work articles Highlights ► We examine how biotic interactions affect microhabitat use in intertidal gobies. ► We manipulate the identity and body size of paired fish in laboratory experiments. ► Microhabitat use varies with the identity/size of a paired individual. ► Diel patterns of habitat use may be different among gobiid species. ► Intertidal gobies show flexible habitat use under variable conditions.

Strontium (Sr) uptake from water and food in otoliths of juvenile pike (Esox lucius L.) Olof Engstedt, Per Koch-Schmidt, Per Larsson Show preview | PDF (523 K) | Related articles | Related reference work articles Highlights ► With increasing salinity, Sr:Ca levels in pike otoliths increase. ► Pike given a diet from marine environment get higher Sr:Ca response in their otoliths. ► Maximum Sr:Ca values in experiment corresponded with maximum field values.

A rapid photographic method detects depth gradient in coralligenous assemblages Julie Deter, Pierre Descamp, Pierre Boissery, Laurent Ballesta, Florian Holon Show preview | PDF (698 K) | Related articles | Related reference work articles Highlights ► We present a fast and objective method for the survey of coralligenous assemblages. ► We compare 7 photographic methods of estimating percent covers of sessile organisms. ► Using simulated quadrats, random-point-quadrats with 64 points is the best method. ► In

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the field, communities deduced from 30 to 40 photographic quadrats are similar. ► The method is able to detect a depth gradient in natural coralligenous assemblages.

Spatio-temporal patterns of larval supply and settlement of intertidal invertebrates reflect a combination of passive transport and larval behavior V. Hoffmann, M.C. Pfaff, G.M. Branch Show preview | PDF (540 K) | Related articles | Related reference work articles Highlights ► We show spatio-temporal patterns in settlement of intertidal mussels and barnacles. ► Settlement is higher in a retentive bay than at a headland upwelling centre. ► Settlement rates are temporally coupled with larval supply rates. ► Mussel settlement conforms to adult zonation, whereas barnacle settlement does not. ► Stage-specific behavior facilitates the onshore transport of barnacle larvae.

Modelled distributions of ten demersal elasmobranchs of the eastern English Channel in relation to the environment C.S. Martin, S. Vaz, J.R. Ellis, V. Lauria, F. Coppin, A. Carpentier Show preview | PDF (2495 K) | Related articles | Related reference work articles Highlights ► GLMs and GIS were used to map the habitats of five skates, four sharks and a stingray. ► Predictors used included depth, sediment type, bed stress, temperature and salinity. ► Habitat maps highlighted contrasting habitat utilisation across elasmobranch species. ► Two species showed ontogenetic differences in habitat utilisation. ► Spatial segregation by sex was found for one species.

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VOLUME 420-421, JUNE 2012 Website

Research articles

Establishment of endosymbiosis: The case of cnidarians and Symbiodinium David Fransolet, Stéphane Roberty, Jean-Christophe Plumier Show preview | PDF (600 K) | Related articles | Related reference work articles Highlights ► Cellular recognition is required between partners for symbiosis. ► Algal glycans and host lectins interact and promote the establishment of symbiosis. ► Expression of Rab proteins on symbiosomes determines their fate.

Behavioural similarities in different species of sandhoppers inhabiting transient environments Lucia Fanini, Lisa V. Gecchele, Simone Gambineri, Abdellatif Bayed, Charles Oliver Coleman, Felicita Scapini Show preview | PDF (837 K) | Related articles | Related reference work articles Graphical abstract

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Highlights ► Sandhoppers' behaviour was analysed in a transient environment (wadi mouth). ► Africorchestia spinifera, Talorchestia brito, Talitrus saltator were found and tested. ► Different species occurrence was found on the two banks of an ephemeral river. ► However, orientation was explained by the same model for the three different species.

Are native Saccostrea glomerata and invasive Crassostrea gigas oysters' habitat equivalents for epibenthic communities in south-eastern Australia? Emma M. Wilkie, Melanie J. Bishop, Wayne A. O'Connor Show preview | PDF (629 K) | Related articles | Related reference work articles Highlights ► Equivalence of habitat provided by invasive and native oysters was assessed. ► Invasive Crassostrea gigas grew faster than native Saccostrea glomerata. ► Differences in growth did not translate to the composition of epibenthic communities. ► High densities of wild C. gigas reduced the abundance of some taxa. ► Effects of C. gigas on epibenthos were primarily quantitative, not qualitative.

Ontogenetic trajectories of otolith shape during shift in habitat use: Interaction between otolith growth and environment Matthias Vignon Show preview | PDF (4241 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► I focused on otolith shape during an ontogenetic shift in habitat use. ► Otolith morphology was analyzed using geometric morphometrics. ► Otolith shape is mainly linked to fish size during the early life stages. ► Growth axis can be completely reshaped by

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environmental conditions. ► Both ontogeny and environmental conditions synergistically influence otolith shape.

Regime shift of a kelp-forest benthic community induced by an ‘invasion’ of the rock lobster Jasus lalandii Laura K. Blamey, George M. Branch Show preview | PDF (1437 K) | Supplementary content | Related articles | Related reference work articles Highlights ► We surveyed benthic communities in areas with high and low rock lobster densities. ► Benthic communities differed significantly according to lobster density and depth. ► Herbivores and encrusting corallines are replaced with foliar algae and lobsters. ► The lobster-invasion has huge implications for the ecosystem and abalone fishery. ► We argue a case of alternate stable states.

Impacts of ocean warming and acidification on the larval development of the barnacle Amphibalanus improvisus Christian Pansch, Ali Nasrolahi, Yasmin Shirin Appelhans, Martin Wahl Show preview | PDF (529 K) | Related articles | Related reference work articles Highlights ► We investigated warming and pCO2 effects on the early development of A. improvisus. ► The barnacle population investigated comes from a naturally acidified habitat. ► Warming affected larval responses much stronger than high pCO2. ► Larvae show a strong tolerance to pCO2 levels as predicted for the end of the century. ► Species from fluctuating habitats, may be able to better cope with climate change.

Gene expression analysis in Mytilus chilensis populations reveals local patterns associated with ocean environmental conditions Gustavo Núñez-Acuña, Fabian J. Tapia, Pilar A. Haye, Cristian Gallardo-Escárate Show preview | PDF (1098 K) | Supplementary content | Related articles | Related reference work articles Highlights ► We report local transcriptomic patterns in populations of Mytilus chilensis. ► We correlate these patterns with oceanographic variability in southern Chile. ► We identified two groups of sites with differential patterns of gene expression. ► Analysis of gene expression patterns can reveal local patterns in populations.

Effects of hypoxia on growth of the diatom Skeletonema costatum R.S.S. Wu, K.T. Wo, J.M.Y. Chiu Show preview | PDF (415 K) | Related articles | Related reference work articles Highlights ► Diatom cultures were exposed to three levels of oxygen for 14 days. ► We investigated the effects of hypoxia on growth of the diatom. ► Cell size and density, and chlorophyll a − 1 concentration are reduced at 0.5 mg O2 L . ► Adenylate energy charge and specific − 1 growth rate are reduced at 2.0 and 0.5 mg O2 L .

Small-scale thermal responses of hydrothermal vent polynoid polychaetes: Preliminary in situ experiments and methodological development K. Robert, K.L. Onthank, S.K. Juniper, R.W. Lee Show preview | PDF (1290 K) | Supplementary content | Related articles | Related reference work articles

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Highlights ► Use of a camera-temperature logger array to study small scale thermoregulation. ► Hidden Markov model used to predict behavioural states based on movement patterns. ► Hydrothermal vent polynoids exhibited a thermoconforming strategy. ► Recommendation postulated for future camera deployments.

Drifting filamentous algal mats disturb sediment fauna: Impacts on macro– meiofaunal interactions Nina Larissa Arroyo, Katri Aarnio, Merja Mäensivu, Erik Bonsdorff Show preview | PDF (1078 K) | Related articles | Related reference work articles Highlights ► Meiofauna can be vulnerable to hypoxia induced by drifting algal mats. ► Macrofauna may cause further losses through predation. ► Macrofauna may induce migration into the algal conglomerates. ► Polychaetes actively predate on harpacticoids and their nauplii and turbellarians.

MAA-like absorbing substances in Florida Keys phytoplankton vary with distance from shore and CDOM: Implications for coral reefs Lore M. Ayoub, Pamela Hallock, Paula G. Coble, Susan S. Bell Show preview | PDF (627 K) | Related articles | Related reference work articles Highlights ► Photo-oxidative stress on coral reefs includes supra-optimal solar radiation. ► Water column mycosporine-like amino acids (MAAs) likely indicates photic stress. ► Colored dissolved organic material (CDOM) preferentially absorbs UVR. ► MAA-like absorbance peaks in phytoplankton suggest photic stress in coral reefs.

Corrigendum to “The effect of temperature gradients and stomach fullness on the vertical distribution of larval herring in experimental columns” [J. Exp. Mar. Biol. Ecol. 404 (2011) 26–32] I.A. Catalán, K.W. Vollset, B. Morales-Nin, A. Folkvord Show preview | PDF (96 K) | Related articles | Related reference work articles

An approach for quantifying effects of multiple predators that forage on different time scales Melisa C. Wong, Justine d'Entremont, Myriam A. Barbeau Show preview | PDF (493 K) | Related articles | Related reference work articles Highlights ► We studied multiple predator effects on prey of whelks and crabs consuming mussels. ► Novel design included behaviour and per capita consumption data. ► Whelks with crab changed behaviour and feeding rate, but independent effect evident. ► No interference competition for conspecific or interspecific pairs. ► Different foraging time scale may cause independent effect despite behavioural change.

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VOLUME 422-423, JULY 2012 Website

Research articles This issue is In Progress but contains articles that are final and fully citable. For recently accepted articles, see Articles in Press.

The role of disturbance in differential regulation of co-occurring brown algae species: Interactive effects of sediment deposition, abrasion and grazing on algae recruits Rita Araujo, Francisco Arenas, Per Åberg, Isabel Sousa-Pinto, Ester A. Serrão Show preview | PDF (506 K) | Related articles | Related reference work articles Highlights ► We studied the effects of disturbance in marginal populations of fucoids. ► Sources of disturbance used were sedimentation, abrasion and herbivory. ► Response variables were survival and growth of F. serratus and F. vesiculosus embryos. ► F. serratus growth was enhanced by abrasion and herbivory that also affected survival. ► F. vesiculosus survival suffered the interactive effects of all the disturbances.

Grazing and nutrient effects on a high rocky intertidal of the Peruvian central coast F.N. Firstater, F.J. Hidalgo, B.J. Lomovasky, O.O. Iribarne Show preview | PDF (383 K) | Related articles | Related reference work articles Highlights ► Over the short-term, grazing has greater effect on biofilm than nutrient addition. ► Over the longer-term, both nutrients and grazers affect biofilm cover. ► The effects of grazers and nutrients on biofilm are not reflected in macroalgae. ► Biofilm would be nutrient-limited in high intertidal of this nutrient-replete system.

Assessing the effect of food and light on Calanus sinicus swimming behavior through video-recording experiments Ming-Ren Chen, Maud Moison, Juan Carlos Molinero, Jiang-Shiou Hwang Show preview | PDF (506 K) | Related articles | Related reference work articles Highlights ► We used robust numerical techniques to identify behavioral patterns of C. sinicus. ► The light and food availability plays key role in C. sinicus. ► C. Sinicus exhibits an adaptive strategy for feeding success and minimize risk. ► Mechanistic understanding of Calanus sinicus feeding ecology.

The influence of intertidal location and temperature on the metabolic cost of emersion in Pisaster ochraceus Elizabeth K. Fly, Cristián J. Monaco, Sylvain Pincebourde, Alexa Tullis Show preview | PDF (518 K) | Supplementary content | Related articles | Related reference work articles Highlights ►Sea stars remained mainly in the low intertidal or heat-protected areas at low tide. ►Body temperature of sea stars increased along the vertical intertidal gradient. ►Oxygen consumption increased with temperature in both air and water. ►Aquatic oxygen consumption was about 2 × higher than aerial oxygen consumption. ►Water temperature affected bioenergetics more than microhabitat choice.

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Foraging ecology and ecophysiology of Cape gannets from colonies in contrasting feeding environments Christina Moseley, David Grémillet, Maëlle Connan, Peter G. Ryan, Ralf H.E. Mullers, Carl D. van der Lingen, Todd W. Miller, Janet C. Coetzee, Robert J.M. Crawford, Philippe Sabarros, Christopher D. McQuaid, Lorien Pichegru Show preview | PDF (801 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Gannets from a larger colony worked harder to feed their chicks. ► Long-term dependence on low quality diet did not affect breeding gannet body condition. ► Behavioural plasticity apparently offsets local prey shortages. ► Highlights importance of monitoring of population health indices and behaviour.

Cypris settlement and dwarf male formation in the barnacle Scalpellum scalpellum: A model for an androdioecious reproductive system U. Spremberg, J.T. Høeg, L. Buhl-Mortensen, Y. Yusa Show preview | PDF (1750 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Hermaphrodites of S. scalpellum can carry 0–13 dwarf males. ► In field populations males are invariably located in two confined receptacle areas. ► Experiments show that cyprids developing into males settle in these areas. ► Settled cyprids penetrate into the hermaphrodite tissue within 12 h after settlement. ► These events are documented by video observations.

Decoupling of recruitment from adult clam assemblages along an estuarine shoreline Megan N. Dethier, Jennifer Ruesink, Helen Berry, Amy G. Sprenger Show preview | PDF (668 K) | Related articles | Related reference work articles Highlights ► Clam abundances are low in inner Puget Sound despite abundant recruitment. ► Survival of recruits into tubes with predator protection was only slightly increased. ► Few juvenile clams were present in inner-estuarine tubes after a summer season. ► Higher summer sediment temperatures in the inner estuary may kill juvenile clams.

Changes in sedimentation, sediment characteristics, and benthic macrofaunal assemblages around marine cage culture under seasonal monsoon scales in a shallow-water bay in Taiwan Yuan-Chao Angelo Huang, Shou-Chung Huang, Hernyi Justin Hsieh, Pei-Jie Meng, Chaolun Allen Chen Show preview | PDF (612 K) | Related articles | Related reference work articles Highlights ► Marine cage culture caused higher levels of sedimentation and organic loading. ► Stress- tolerant polychaetes thrived in the cage sites with organic enrichment. ► Hydrographic regimes affected by seasonal monsoon may influence the bottom environment. ► Strong monsoon determined the extent of benthic environmental deterioration.

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VOLUME 80, PART 5, APRIL 2012 Website

Research articles Special Issue: The Current Status of Elasmobranchs: Biology, Fisheries and Conservation

The current status of elasmobranchs: biology, fisheries and conservation (pages 897–900) W. T. White, S. J. M. Blaber and J. F. Craig Abstract Full Article (HTML) PDF(445K) References

A review of the taxonomy of chondrichthyan fishes: a modern perspective (pages 901–917) W. T. White and P. R. Last Abstract Full Article (HTML) PDF(838K) References

What is an ‘elasmobranch’? The impact of palaeontology in understanding elasmobranch phylogeny and evolution (pages 918–951) J. G. Maisey Abstract Full Article (HTML) PDF(626K) References

A review of elasmobranch research in the Red Sea (pages 952–965) J. L. Y. Spaet, S. R. Thorrold and M. L. Berumen Abstract Full Article (HTML) PDF(767K) References

An overview on the role of Hexanchiformes in marine ecosystems: biology, ecology and conservation status of a primitive order of modern sharks (pages 966–990) A. Barnett, J. M. Braccini, C. A. Awruch and D. A. Ebert Abstract Full Article (HTML) PDF(559K) References

Biology of the Greenland shark Somniosus microcephalus (pages 991–1018) M. A. MacNeil, B. C. McMeans, N. E. Hussey, P. Vecsei, J. Svavarsson, K. M. Kovacs, C. Lydersen, M. A. Treble, G. B. Skomal, M. Ramsey and A. T. Fisk Abstract Full Article (HTML) PDF(890K) References

A review of the biology, fisheries and conservation of the whale shark Rhincodon typus (pages 1019–1056) D. Rowat and K. S. Brooks Abstract Full Article (HTML) PDF(644K) References Supporting Information

An overview of the biology and status of undulate ray Raja undulata in the north- east Atlantic Ocean (pages 1057–1074) J. R. Ellis, S. R. McCully and M. J. Brown Abstract Full Article (HTML) PDF(876K) References

Biology, ecology and conservation of the Mobulidae (pages 1075–1119) L. I. E. Couturier, A. D. Marshall, F. R. A. Jaine, T. Kashiwagi, S. J. Pierce, K. A. Townsend, S. J. Weeks, M. B. Bennett and A. J. Richardson Abstract Full Article (HTML) PDF(4711K) References

Molecular markers: progress and prospects for understanding reproductive ecology in elasmobranchs (pages 1120–1140)

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D. S. Portnoy and E. J. Heist Abstract Full Article (HTML) PDF(570K) References

Assessing the potential for post-copulatory sexual selection in elasmobranchs (pages 1141–1158) J. L. Fitzpatrick, R. M. Kempster, T. S. Daly-Engel, S. P. Collin and J. P. Evans Abstract Full Article (HTML) PDF(585K) References Supporting Information

Life history characteristics of a lightly exploited stock of Squalus suckleyi (pages 1159–1180) C. A. Tribuzio and G. H. Kruse Abstract Full Article (HTML) PDF(1606K) References

Biological vulnerability of two exploited sharks of the genus Deania (Centrophoridae) (pages 1181–1206) S. B. Irvine, R. K. Daley, K. J. Graham and J. D. Stevens Abstract Full Article (HTML) PDF(1057K) References

Biological observations on the crocodile shark Pseudocarcharias kamoharai (pages 1207–1212) X. J. Dai, J. F. Zhu, X. J. Chen, L. X. Xu and Y. Chen Abstract Full Article (HTML) PDF(548K) References

Reproductive biology of Zearaja chilensis (Chondrichthyes: Rajidae) in the south- east Pacific Ocean (pages 1213–1226) C. Bustamante, C. Vargas-Caro, M. C. Oddone, F. Concha, H. Flores, J. Lamilla and M. B. Bennett Abstract Full Article (HTML) PDF(942K) References

An elasmobranch maternity ward: female round stingrays Urobatis halleri use warm, restored estuarine habitat during gestation (pages 1227–1245) K. E. Jirik and C. G. Lowe Abstract Full Article (HTML) PDF(1060K) References Supporting Information

Reproductive variables of Urotrygon rogersi (Batoidea: Urotrygonidae): a species with a triannual reproductive cycle in the eastern tropical Pacific Ocean (pages 1246–1266) P. A. Mejía-Falla, A. F. Navia and E. Cortés Abstract Full Article (HTML) PDF(1522K) References

Biennial reproductive cycle in an extensive matrotrophic viviparous batoid: the sandyback stingaree Urolophus bucculentus from south-eastern Australia (pages 1267–1291) F. I. Trinnie, T. I. Walker, P. L. Jones and L. J. Laurenson Abstract Full Article (HTML) PDF(1018K) References

Micro-computed tomography: an alternative method for shark ageing (pages 1292–1299) P. T. Geraghty, A. S. Jones, J. Stewart and W. G. Macbeth Abstract Full Article (HTML) PDF(607K) References

Reassessment of spiny dogfish Squalus acanthias age and growth using vertebrae and dorsal-fin spines (pages 1300–1319) W. J. Bubley, J. Kneebone, J. A. Sulikowski and P. C. W. Tsang Abstract Full Article (HTML) PDF(953K) References

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Biology of the silky shark Carcharhinus falciformis (Carcharhinidae) in the eastern Indian Ocean, including an approach to estimating age when timing of parturition is not well defined (pages 1320–1341) N. G. Hall, C. Bartron, W. T. White, Dharmadi and I. C. Potter Abstract Full Article (HTML) PDF(841K) References

An analytical and hypothesis-driven approach to elasmobranch movement studies (pages 1342–1360) Y. P. Papastamatiou and C. G. Lowe Abstract Full Article (HTML) PDF(622K) References

The use and abuse of photographic identification in sharks and rays (pages 1361– 1379) A. D. Marshall and S. J. Pierce Abstract Full Article (HTML) PDF(672K) References

Scale and pattern of broadnose sevengill shark Notorynchus cepedianus movement in estuarine embayments (pages 1380–1400) G. D. Williams, K. S. Andrews, S. L. Katz, M. L. Moser, N. Tolimieri, D. A. Farrer and P. S. Levin Abstract Full Article (HTML) PDF(1239K) References

Patterns in composition, abundance and scarring of whale sharks Rhincodon typus near Holbox Island, Mexico (pages 1401–1416) D. Ramírez-Macías, M. Meekan, R. De La Parra-Venegas, F. Remolina-Suárez, M. Trigo- Mendoza and R. Vázquez-Juárez Abstract Full Article (HTML) PDF(1138K) References

Movement patterns of the draughtboard shark Cephaloscyllium laticeps (Scyliorhinidae) determined by passive tracking and conventional tagging (pages 1417–1435) C. A. Awruch, S. D. Frusher, J. D. Stevens and A. Barnett Abstract Full Article (HTML) PDF(777K) References

Diel temperature patterns of juvenile lemon sharks Negaprion brevirostris, in a shallow-water nursery (pages 1436–1448) A. L. DiGirolamo, S. H. Gruber, C. Pomory and W. A. Bennett Abstract Full Article (HTML) PDF(764K) References

Stable isotopes and elasmobranchs: tissue types, methods, applications and assumptions (pages 1449–1484) N. E. Hussey, M. A. MacNeil, J. A. Olin, B. C. McMeans, M. J. Kinney, D. D. Chapman and A. T. Fisk Abstract Full Article (HTML) PDF(626K) References

Stable-isotope analysis of a deep-sea benthic-fish assemblage: evidence of an enriched benthic food web (pages 1485–1507) M. D. Boyle, D. A. Ebert and G. M. Cailliet Abstract Full Article (HTML) PDF(586K) References

Pacific sleeper shark Somniosus pacificus trophic ecology in the eastern North Pacific Ocean inferred from nitrogen and carbon stable-isotope ratios and diet (pages 1508–1545) D. L. Courtney and R. Foy Abstract Full Article (HTML) PDF(915K) References

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Diet and scavenging habits of the smooth skate Dipturus innominatus (pages 1546–1562) J. S. Forman and M. R. Dunn Abstract Full Article (HTML) PDF(635K) References

Feeding habits and trophic ecology of Dasyatis longa (Elasmobranchii: Myliobatiformes): sexual, temporal and ontogenetic effects (pages 1563–1579) J. López-García, A. F. Navia, P. A. Mejía-Falla and E. A. Rubio Abstract Full Article (HTML) PDF(691K) References

Feeding ecology and dietary comparisons among three sympatric Neotrygon (Myliobatoidei: Dasyatidae) species (pages 1580–1594) I. P. Jacobsen and M. B. Bennett Abstract Full Article (HTML) PDF(830K) References

Fisheries, management and conservation of the whale shark Rhincodon typus in Taiwan (pages 1595–1607) H. H. Hsu, S. J. Joung and K. M. Liu Abstract Full Article (HTML) PDF(784K) References

A preliminary survey of whale shark Rhincodon typus catch and trade in China: an emerging crisis (pages 1608–1618) W. Li, Y. Wang and B. Norman Abstract Full Article (HTML) PDF(643K) References

Species, sex, size and male maturity composition of previously unreported elasmobranch landings in Kuwait, Qatar and Abu Dhabi Emirate (pages 1619– 1642) A. B. M. Moore, I. D. McCarthy, G. R. Carvalho and R. Peirce Abstract Full Article (HTML) PDF(1091K) References

A global review of species-specific shark-fin-to-body-mass ratios and relevant legislation (pages 1643–1677) L. Biery and D. Pauly Abstract Full Article (HTML) PDF(631K) References

Species composition of skates (Rajidae) in commercial fisheries around the British Isles and their discarding patterns (pages 1678–1703) J. F. Silva, J. R. Ellis and T. L. Catchpole Abstract Full Article (HTML) PDF(1134K) References

Skate assemblage on the eastern Patagonian Shelf and Slope: structure, diversity and abundance (pages 1704–1726) A. Arkhipkin, P. Brickle, V. Laptikhovsky, J. Pompert and A. Winter Abstract Full Article (HTML) PDF(6377K) References

Ecological risk assessment and its application to elasmobranch conservation and management (pages 1727–1748) A. J. Gallagher, P. M. Kyne and N. Hammerschlag Abstract Full Article (HTML) PDF(657K) References

Relative abundance and size of coastal sharks derived from commercial shark longline catch and effort data (pages 1749–1764) J. K. Carlson, L. F. Hale, A. Morgan and G. Burgess Abstract Full Article (HTML) PDF(1541K) References

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Evidence of stability in a chondrichthyan population: case study of the spotted ratfish Hydrolagus colliei (Chondrichthyes: Chimaeridae) (pages 1765–1788) L. A. K. Barnett, D. A. Ebert and G. M. Cailliet Abstract Full Article (HTML) PDF(871K) References Supporting Information

A review of the application of molecular genetics for fisheries management and conservation of sharks and rays (pages 1789–1843) C. L. Dudgeon, D. C. Blower, D. Broderick, J. L. Giles, B. J. Holmes, T. Kashiwagi, N. C. Krück, J. A. T. Morgan, B. J. Tillett and J. R. Ovenden Abstract Full Article (HTML) PDF(781K) References

Recovery potential and conservation options for elasmobranchs (pages 1844– 1869) C. A. Ward-Paige, D. M. Keith, B. Worm and H. K. Lotze Abstract Full Article (HTML) PDF(618K) References Supporting Information

Identification of factors influencing shark catch and mortality in the Marshall Islands tuna longline fishery and management implications (pages 1870–1894) D. Bromhead, S. Clarke, S. Hoyle, B. Muller, P. Sharples and S. Harley Abstract Full Article (HTML) PDF(1349K) References

Blue shark Prionace glauca fin-to-carcass-mass ratios in Spain and implications for finning ban enforcement (pages 1895–1903) J. Santana-Garcon, S. Fordham and S. Fowler Abstract Full Article (HTML) PDF(636K) References

Muscle function and swimming in sharks (pages 1904–1939) R. E. Shadwick and J. A. Goldbogen Abstract Full Article (HTML) PDF(2303K) References

Basics of skin structure and function in elasmobranchs: a review (pages 1940– 1967) W. Meyer and U. Seegers Abstract Full Article (HTML) PDF(3180K) References

Neuroecology of cartilaginous fishes: the functional implications of brain scaling (pages 1968–2023) K. E. Yopak Abstract Full Article (HTML) PDF(917K) References

Vision in elasmobranchs and their relatives: 21st century advances (pages 2024– 2054) T. J. Lisney, S. M. Theiss, S. P. Collin and N. S. Hart Abstract Full Article (HTML) PDF(799K) References

Phylogenetic and ecological factors influencing the number and distribution of electroreceptors in elasmobranchs (pages 2055–2088) R. M. Kempster, I. D. McCarthy and S. P. Collin Abstract Full Article (HTML) PDF(783K) References

Cell and molecular biology of the spiny dogfish Squalus acanthias and little skate Leucoraja erinacea: insights from in vitro cultured cells (pages 2089–2111) D. W. Barnes Abstract Full Article (HTML) PDF(542K) References

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Effects of nonylphenol on vitellogenin synthesis in adult males of the spotted ray Torpedo marmorata (pages 2112–2121) G. Del Giudice, M. Prisco, M. Agnese, M. Verderame, L. Rosati, E. Limatola and P. Andreuccetti Abstract Full Article (HTML) PDF(793K) References

Announcement

Airbreathing Fishes (page 2123) Abstract Full Article (HTML) PDF(468K) Supporting Information

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VOLUME 80, PART 6, MAY 2012 Website

Research articles

The contrasting role of heterochromatin in the differentiation of sex chromosomes: an overview from Neotropical fishes (pages 2125–2139) M. B. Cioffi, O. Moreira-Filho, L. F. Almeida-Toledo and L. A. C. Bertollo Article first published online: 13 APR 2012 | DOI: 10.1111/j.1095-8649.2012.03272.x Abstract Full Article (HTML) PDF(714K) References

Evidence for reproductive philopatry in the bull shark Carcharhinus leucas (pages 2140–2158) B. J. Tillett, M. G. Meekan, I. C. Field, D. C. Thorburn and J. R. Ovenden Abstract Full Article (HTML) PDF(774K) References Supporting Information

Discriminating farmed gilthead sea bream Sparus aurata and European sea bass Dicentrarchus labrax from wild stocks through scales and otoliths (pages 2159– 2175) P. Arechavala-Lopez, P. Sanchez-Jerez, J. T. Bayle-Sempere, D. G. Sfakianakis and S. Somarakis Abstract Full Article (HTML) PDF(1048K) References

Reproductive strategies of two invasive tilapia species Oreochromis mossambicus and Tilapia mariae in northern Australia (pages 2176–2197) D. J. Russell, P. A. Thuesen and F. E. Thomson Abstract Full Article (HTML) PDF(1474K) References

Population genetic structure of skipjack tuna Katsuwonus pelamis from the Indian coast using sequence analysis of the mitochondrial DNA D-loop region (pages 2198–2212) M. R. Menezes, G. Kumar and S. P. Kunal Abstract Full Article (HTML) PDF(592K) References

Large dam reservoirs are probably long-period oscillators of fish diversity (pages 2213–2235) Ł. Głowacki and T. Penczak Abstract Full Article (HTML) PDF(1109K) References Supporting Information

Structures and immunolocalization of Na+, K+-ATPase, Na+/H+ exchanger 3 and vacuolar-type H+-ATPase in the gills of blennies (Teleostei: Blenniidae) inhabiting rocky intertidal areas (pages 2236–2252)

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M. Uchiyama, M. Komiyama, H. Yoshizawa, N. Shimizu, N. Konno and K. Matsuda Abstract Full Article (HTML) PDF(1083K) References

A robust flow-cytometric protocol for assessing growth rate of hatchery-reared barramundi Lates calcarifer larvae (pages 2253–2266) J. A. Domingos, P. Fromm, C. Smith-Keune and D. R. Jerry Abstract Full Article (HTML) PDF(722K) References

Evaluation of external operculum loop tags to individually identify cage-cultured Atlantic halibut Hippoglossus hippoglossus in commercial research trials (pages 2267–2280) P. J. Sykes, H. Stryhn, C. A. McClure, C. L. Brooking and K. L. Hammell Abstract Full Article (HTML) PDF(649K) References

Influence of freshwater flows on the distribution of eggs and larvae of black bream Acanthopagrus butcheri within a drought-affected estuary (pages 2281– 2301) J. Williams, J. S. Hindell, S. E. Swearer and G. P. Jenkins Abstract Full Article (HTML) PDF(1020K) References

Panmixia in Zoarces viviparus: implications for environmental monitoring studies (pages 2302–2316) S. Bergek, F. Franzén, M. Quack, A. Hochkirch, T. Kinitz, T. Prestegaard and M. Appelberg Abstract Full Article (HTML) PDF(1189K) References Supporting Information

Empirical relationships between body tissue composition and bioelectrical impedance of brook trout Salvelinus fontinalis from a Rocky Mountain Stream (pages 2317–2327) J. B. Rasmussen, A. N. Krimmer, A. J. Paul and A. Hontela Abstract Full Article (HTML) PDF(560K) References Supporting Information

Age and growth of albacore Thunnus alalunga in the North Pacific Ocean (pages 2328–2344) K.-S. Chen, T. Shimose, T. Tanabe, C.-Y. Chen and C.-C. Hsu Abstract Full Article (HTML) PDF(1212K) References

Detection of feeding behaviour in common carp Cyprinus carpio by using an acceleration data logger to identify mandibular movement (pages 2345–2356) Y. Makiguchi, Y. Sugie, T. Kojima and Y. Naito Abstract Full Article (HTML) PDF(844K) References Supporting Information

Feeding ecology of the American freshwater goby Ctenogobius shufeldti (Gobiidae, Perciformes) in a sub-tropical estuary (pages 2357–2373) R. F. Contente, M. F. Stefanoni and H. L. Spach Abstract Full Article (HTML) PDF(698K) References

Does proximity to aquatic pollution affect reproductive traits in a wild-caught intertidal fish? (pages 2374–2383) N. M. Sopinka, J. L. Fitzpatrick, J. E. Taves, M. G. Ikonomou, S. E. Marsh-Rollo and S. Balshine Abstract Full Article (HTML) PDF(721K) References

Visibility conditions and diel period affect small-scale spatio-temporal behaviour of pike Esox lucius in the absence of prey and conspecifics (pages 2384–2389) P. A. Nilsson, H. Baktoft, M. Boel, K. Meier, L. Jacobsen, E. M. Rokkjær, T. Clausen and C. Skov

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Abstract Full Article (HTML) PDF(527K) References

Book Review

THE BANGGAI CARDINALFISH: NATURAL HISTORY, CONSERVATION AND CULTURE OF PTERAPOGON KAUDERNI - Edited by A. A. Vagelli (pages 2390–2392) L. A. JAWAD Abstract Full Article (HTML) PDF(443K)

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VOLUME 35, PART 5, MAY 2012 Website

Research articles

Lymphoid organ cell culture system from Penaeus monodon (Fabricius) as a platform for white spot syndrome virus and shrimp immune-related gene expression (pages 321–334) S Jose, P Jayesh, N S Sudheer, G Poulose, A Mohandas, R Philip and I S Bright Singh Abstract Full Article (HTML) PDF(723K) References

First case of Aeromonas schubertii infection in the freshwater cultured snakehead fish, Ophiocephalus argus (Cantor), in China (pages 335–342) J Y Liu and A H Li Abstract Full Article (HTML) PDF(226K) References

Molecular characterization and increased expression of the Nile tilapia, Oreochromis niloticus (L.), T-cell receptor beta chain in response to Streptococcus agalactiae infection (pages 343–358) N Nithikulworawong, A Yakupitiyage, SK Rakshit and P Srisapoome Abstract Full Article (HTML) PDF(525K) References

Effect of poly-β-hydroxybutyrate on Chinese mitten crab, Eriocheir sinensis, larvae challenged with pathogenic Vibrio anguillarum (pages 359–364) L Sui, J Cai, H Sun, M Wille and P Bossier Abstract Full Article (HTML) PDF(162K) References

Experimental mycobacteriosis in Atlantic cod, Gadus morhua L. (pages 365–377) M A Zerihun, D J Colquhoun and T T Poppe Abstract Full Article (HTML) PDF(631K) References

Development of a new antibody for detecting natural killer enhancing factor (NKEF)-like protein in infected salmonids (pages 379–388) J Bethke, V Rojas, J Berendsen, C Cárdenas, F Guzmán, J A Gallardo and L Mercado Abstract Full Article (HTML) PDF(678K) References

Short Communication

Achyranthes aspera enhances immunity and antigen clearance in common carp, Cyprinus carpio L. (pages 389–392) R Chakrabarti and Y V Rao Abstract Full Article (HTML) PDF(297K) References

Erratum

Development of neutralizing antibody responses in muskellunge, Esox masquinongy (Mitchill), experimentally exposed to viral haemorrhagic septicaemia virus (genotype IVb) (page 393) Article first published online: 9 APR 2012 | DOI: 10.1111/j.1365-2761.2012.01352.x This article corrects: Development of neutralizing antibody responses in muskellunge, Esox masquinongy (Mitchill), experimentally exposed to viral haemorrhagic septicaemia virus (genotype IVb) Vol. 35, Issue 1, 11–18, Article first published online: 17 NOV 2011

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VOLUME 35, PART 6, JUNE 2012 Website

Research articles

Oral transmission as a route of infection for viral haemorrhagic septicaemia virus in rainbow trout, Oncorhynchus mykiss (Walbaum) (pages 395–406) A A Schönherz, M H H Hansen, H B H Jørgensen, P Berg, N Lorenzen and K Einer-Jensen Abstract Full Article (HTML) PDF(267K) References Supporting Information

Validation of diagnostic assays to screen broodstock for Flavobacterium psychrophilum infections (pages 407–419) A Long, M P Polinski, D R Call and K D Cain Abstract Full Article (HTML) PDF(301K) References

Isolation and characterization of Aeromonas schubertii from diseased snakehead, Channa maculata (Lacepède) (pages 421–430) Y F Chen, R S Liang, X L Zhuo, X T Wu and J X Zou Abstract Full Article (HTML) PDF(503K) References

Infectivity study of Streptococcus phocae to seven fish and mammalian cell lines by confocal microscopy (pages 431–436) M Cortez-San Martin, A González-Contreras and R Avendaño-Herrera Abstract Full Article (HTML) PDF(234K) References

Morphopathological features of a severe ulcerative disease outbreak associated with Tenacibaculum maritimum in cultivated sole, Solea senegalensis (L.) (pages 437–445) P Vilar, L D Faílde, R Bermúdez, F Vigliano, A Riaza, R Silva, Y Santos and M I Quiroga Abstract Full Article (HTML) PDF(726K) References

Development and validation of a range of endogenous controls to support the implementation of practical Taqman real-time PCR-based surveillance for fish diseases within aquaculture (pages 447–454) F Bland, R McIntosh, N Bain and M Snow Abstract Full Article (HTML) PDF(167K) References

Blood cleansing cells in head kidney and spleen in Buenos Aires tetra, Hyphessobrycon anisitsi (Eigenmann), (Characidae: Teleostei) (pages 455–460) I L Leknes Abstract Full Article (HTML) PDF(432K) References

Short Communications

Simultaneous detection of the IPN and ISA viruses in outbreaks of clinical disease and mortality in farmed Atlantic salmon, Salmo salar L., in Chile (pages 461–465) M Cortez-San Martin, A Rivas-Aravena, S Guajardo, M T Castillo, M Jashes, A M Sandino and E Spencer Abstract Full Article (HTML) PDF(237K) References

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Safety and efficacy of emamectin benzoate to treat Anguillicoloides crassus (Kuwahara, Niimi & Itagaki) infections in American eels, Anguilla rostrata (Lesueur) (pages 467–470) S Larrat, J Marvin and S Lair Abstract Full Article (HTML) PDF(140K) References Request Permissions

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Aquaculture Journals Page: 125 of 169

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VOLUME 110, ISSUE 1, MAY 2012 Website

Research articles

Regular Articles

Selection of Beauveria bassiana sensu lato and Metarhizium anisopliae sensu lato isolates as microbial control agents against the boll weevil (Anthonomus grandis) in Argentina A.L. Nussenbaum, R.E. Lecuona Show preview | PDF (219 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► All Metarhizium anisopliae isolates were pathogenic against adults of boll weevil. ► Most of the Beauveria bassiana isolates were nonpathogenic or presented low virulence. ► The isolates of M. anisopliae presented the lowest ST50, LC50, and LC90 values. ► Infected females reduced the damage caused by feeding on the cotton squares. ► Isolates were compatible with pyrethroid insecticides, but none with endosulfan.

Linking evolutionary lineage with parasite and pathogen prevalence in the Iberian honey bee Laura Jara, Almudena Cepero, Encarna Garrido-Bailón, Raquel Martín-Hernández, Mariano Higes, Pilar De la Rúa Show preview | PDF (431 K) | Supplementary content | Related articles | Related reference work articles Graphical abstract

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Highlights ► Iberian honey bees belong to African (A) or west European (M) evolutionary lineages. ► Evolutionary lineage was determined in Iberian honey bees in 2006 and 2010. ► In 2006 Nosema apis was found in a significant higher frequency in M than in A honey bees. ► In 2010 Nosema ceranae was found in a high frequency in both M and A honey bees. ► In both years no significant mite-evolutionary lineage relation was observed.

Characterization of Paecilomyces cinnamomeus from the camellia whitefly, Aleurocanthus camelliae (Hemiptera: Aleyrodidae), infesting tea in Japan Tsutomu Saito, Jun Takatsuka, Mitsuaki Shimazu Show preview | PDF (1478 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► We identify Paecilomyces cinnamomeus from the whitefly on tea. ► We examine virulence of the fungus to the whitefly larvae. ► Optimum and upper limit temperatures for fungal growth are examined. ► A bactericide and some fungicides are harmful to fungal growth.

The lipopolysaccharide biosynthesis core of the Mexican pathogenic strain Serratia entomophila is associated with toxicity to larvae of Phyllophaga blanchardi Zitlhally Rodríguez-Segura, Jianwu Chen, Francisco J. Villalobos, Sarjeet Gill, María Eugenia Nuñez-Valdez Show preview | PDF (637 K) | Supplementary content | Related articles | Related reference work articles Graphical abstract

Highlights ► The bacteria Serratia entomophila Mor4.1 bring toxicity to Phyllophaga larvae. ► Five different DNA regions participate in toxic activities at the hemocoel of larvae. ► Genes for Aquaculture Journals Page: 127 of 169

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dUTPase, flavoprotein and heptosyltransferase III are toxicity key factors. ► LPS from Mor4.1 are insecticidal to Phyllophaga larvae by injection bio-assay.

Genetic variation and virulence of Autographa californica multiple nucleopolyhedrovirus and Trichoplusia ni single nucleopolyhedrovirus isolates Robert L. Harrison, Holly J.R. Popham, Jonathan E. Breitenbach, Daniel L. Rowley Show preview | PDF (651 K) | Supplementary content | Related articles | Related reference work articles Graphical abstract

Highlights ► AcMNPV variants from Plutella xylostella and Galleria mellonella form a distinct group. ► A new baculovirus from the Agrotis-Spodoptera spp. NPV clade was identified. ► A new genotype in which the ORF ac2 bro gene split into two bro genes was detected. ► PlxyMNPV-CL3 killed Trichoplusia ni larvae faster, but required higher doses than other NPVs.

Factors influencing Nosema bombi infections in natural populations of Bombus terrestris (Hymenoptera: Apidae) Anett Huth-Schwarz, Josef Settele, Robin F.A. Moritz, F. Bernhard Kraus Show preview | PDF (399 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► In this study we examined factors influencing N. bombi parasitism in B. terrestris. ► We determined host genetic variability and colony density in natural populations. ► High density and low heterozygosity populations had higher degrees of infection per individual. ► Males had both a higher prevalence and a higher spore load than females.

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Histopathological survey of pathogens and commensals of white-clawed crayfish (Austropotamobius pallipes) in England and Wales Matt Longshaw, Paul D. Stebbing, Kelly S. Bateman, Frances A. Hockley Show preview | PDF (1105 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Endangered white clawed crayfish contain a number of infections. ► Austropotamobius pallipes bacilliform virus (ApBV) is reported for the first time in England and Wales. ► Most infections innocuous with the exception of Thelohania contejeani. ► It is important to screen crayfish for all infections prior to moving to other sites.

An insecticidal protein from Xenorhabdus budapestensis that results in prophenoloxidase activation in the wax moth, Galleria mellonella Jun Yang, Hong-Mei Zeng, Hua-Feng Lin, Xiu-Fen Yang, Zheng Liu, Li-Hua Guo, Jing-Jing Yuan, De-Wen Qiu Show preview | PDF (1636 K) | Supplementary content | Related articles | Related reference work articles Graphical abstract

Highlights ► We purified an insecticidal protein named HIP57 from Xenorhabdus budapestensis. ► By injection, HIP57 caused Galleria mellonella larval body to blacken. ► The corresponding LD50 was evaluated to 206.81 ng/larva. ► HIP57 has a molecular weight of 57 kDa and is homologous to GroEL. ► HIP57 could activate the PO cascade in G. mellonella larva..

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Interactions among flavonoids of propolis affect antibacterial activity against the honeybee pathogen Paenibacillus larvae Cristina Manuela Mihai, Liviu Al. Mărghitaș, Daniel S. Dezmirean, Flore Chirilă, Robin F.A. Moritz, Helge Schlüns Show preview | PDF (477 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Propolis extracts of different origins inhibited the growth of Paenibacillus larvae. ► The extracts showed major differences in the content of flavonoids and polyphenols. ► Interaction effects among flavonoids influence antimicrobial properties.

Effects of salinity on hard clam (Mercenaria mercenaria) defense parameters and QPX disease dynamics Mickael Perrigault, Soren F. Dahl, Emmanuelle Pales Espinosa, Bassem Allam Show preview | PDF (405 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► We investigated the effect of salinity on immunity and QPX disease development in clams. ► QPX-associated mortality was higher in clams maintained at 30 psu compared to 17 psu. ► Constitutive clam defense factors and their response to QPX challenge were also affected by salinity. ► Nevertheless, the effect of salinity appears secondary as compared to that we reported earlier for temperature.

Novel protein of IBP from silkworm, Bombyx mori, involved in cytoplasmic polyhedrosis virus infection Kun Gao, Xiang-yuan Deng, He-ying Qian, Ping Wu, Guang-xing Qin, Ting Liu, Zhong-yuan Shen, Xi-jie Guo Aquaculture Journals Page: 130 of 169

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Show preview | PDF (1137 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► A novel BmIBP2 gene was first cloned and sequenced from silkworm (Bombyx mori). ► BmIBP2 transcripts were expressed mainly in midgut. ► BmIBP2 is a putative homolog of vertebrate endocrine factor IGFBP7 in silkworm. ► Expression of BmIBP2 was significant up-regulated in midgut during BmCPV infection. ► BmIBP2 may play a key role in the immune response of silkworm to BmCPV infection.

Inactivation of the budded virus of Autographa californica M nucleopolyhedrovirus by gloverin Daniela A. Moreno-Habel, Ivan M. Biglang-awa, Angelica Dulce, Dee Dee Luu, Peter Garcia, Paul M.M. Weers, Eric J. Haas-Stapleton Show preview | PDF (1046 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Gloverin expression is upregulated in Trichoplusia ni infected with the baculovirus AcMNPV. ► Gloverin protein reduced the infectivity of AcMNPV budded virus. ► Vesicles comprised of phosphatidylglycerol were perforated by gloverin.

Mesocosm experiments to assess the transmission of Pandora neoaphidis within simple and mixed field margins and over the crop-margin interface J. Baverstock, M.T. Torrance, S.J. Clark, J.K. Pell Show preview | PDF (402 K) | Related articles | Related reference work articles Graphical abstract

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Highlight ► The effect of field margin plant composition on fungal transmission was assessed. ► Transmission of the fungus Pandora neoaphidis was greatest on a mixed field margin. ► Oviposition by the parasitoid Aphidius ervi was greatest on a simple field margin. ► Both species moved bi-directionally over the crop-margin interface. ► Field margins could be sources and sinks of both aphid natural enemies.

Further evidence of an oriental origin for Nosema ceranae (Microsporidia: Nosematidae) Cristina Botías, Denis L. Anderson, Aránzazu Meana, Encarna Garrido-Bailón, Raquel Martín-Hernández, Mariano Higes Show preview | PDF (305 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Origins and primary host of Nosema ceranae are yet to be accurately established. ► Prevalence and distribution of the parasite in four Asian bee species are evaluated. ► Further evidence of ongoing spread of N. ceranae out of Asia is also surveyed. ► N. ceranae is widespread in Apis cerana and its presence in Apis koschevnikovi is reported for the first time. ► A. cerana introduced N. ceranae to A. mellifera in the Solomon Islands.

Effect of temperature, photoperiod, flooding, and drying on the hatching pattern of the eggs of Strelkovimermis spiculatus (Nematoda: Mermithidae) María V. Micieli, Paula Risso, María F. Achinelly, M. de los M. Villar, Juliana Tarquini Show preview | PDF (264 K) | Related articles | Related reference work articles Graphical abstract

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Highlights ► Effect of abiotic factors on Strelkovimermis spiculatus preparasite emergence from numbered eggs. ► Maximum percent J2 emergence under flooding at 16 °C and 12:12 (L:D) photoperiod. ► First preparasites at Day 7 (25 °C) or 14 (16 °C) implied as minimum embryogenesis time. ► Prolonged J2 emergence after oviposition with flooding implied hatching asychrony. ► Higher J2 emergence when kept flooded than with any flooding– drying cycle.

Reaction of the mussel Mytilus galloprovincialis (Bivalvia) to Eugymnanthea inquilina (Cnidaria) and Urastoma cyprinae (Turbellaria) concurrent infestation Ivona Mladineo, Mirela Petrić, Jerko Hrabar, Ivana Bočina, Melita Peharda Show preview | PDF (1354 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Assess damage by Eugymnanthea inquilina and Urastoma cyprinae in Mytilus galloprovincialis. ► No parasitic impact on reproduction or condition index. ► Host cells ultrastructural and functional deviation at the attachment site. ► Specific host reaction resulted in tissue destruction and hemocyte activation.

Short Communications

Reduced activity of juvenile hormone esterase in microsporidia-infected Lymantria dispar larvae Julia Karlhofer, Christa Schafellner, Gernot Hoch Show preview | PDF (227 K) | Related articles | Related reference work articles Graphical abstract

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Highlights ► Fat body infection with Vairimorpha disparis affects juvenile hormone metabolism of Lymantria dispar larvae. ► Infected larvae showed significantly reduced activity of juvenile hormone esterase. ► Juvenile hormone titers were slightly elevated in infected larvae.

American Foulbrood in Uruguay: Twelve years from its first report Karina Antúnez, Matilde Anido, Belén Branchiccela, Jorge Harriet, Juan Campá, Pablo Zunino Show preview | PDF (365 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Paenibacillus larvae is present in Uruguay since 1999. In 2001 prevalence was 51%. ► We evaluated the evolution of AFB outbreaks and found a marked peak in 2002. ► In 2011, P. larvae spores prevalence decreased to 2%. ► AFB has been successfully controlled in Uruguay without the massive use of antibiotics.

A fungal-like organism associated with a wasp (Hymenoptera: Pteromalidae) in Dominican amber George Poinar Jr., Joseph W. Spatafora Show preview | PDF (375 K) | Related articles | Related reference work articles Graphical abstract

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Highlights ► A wasp parasitized by a fungal-like organism has been identified in Dominican amber. ► A fungal-like organism parasitizing a wasp in Dominican amber. ► A rare fungal-like organism in Dominican amber.

The rectal glands of Heterorhabditis bacteriophora (Rhabditida: Heterorhabditidae) hermaphrodites and their role in symbiont transmission S. Patricia Stock, Ming-Min Lee, Yolanda Flores-Lara Show preview | PDF (1092 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Three rectal glands present with terminal portion opening into the rectum by means of a duct. ► Rectal glands of Heterorhabditis hermaphrodites do not harbor Photorhabdus bacteria. ► Posterior intestinal cells contain vacuoles of various sizes harboring bacterial cells.

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VOLUME109, ISSUE 2, JUNE 2012 Website

Research articles Diseases in Aquatic Crustaceans: Problems and Solutions for Global Food Security Edited by Grant D. Stentiford

Preface

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Diseases in aquatic crustaceans: Problems and solutions for global food security Grant D. Stentiford Show preview | PDF (128 K) | Related articles | Related reference work articles Reviews

Disease will limit future food supply from the global crustacean fishery and aquaculture sectors G.D. Stentiford, D.M. Neil, E.J. Peeler, J.D. Shields, H.J. Small, T.W. Flegel, J.M. Vlak, B. Jones, F. Morado, S. Moss, J. Lotz, L. Bartholomay, D.C. Behringer, C. Hauton, D.V. Lightner Show preview | PDF (2654 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Disease is a major limiting factor on food production from crustacean fisheries and aquaculture. ► Global population increases place further pressure on creating sustainability in the sector. ► Control strategies are limited to efficient biosecurity and good management practices. ► Research focus on disease mitigation, best practice and improved supply chains required.

The role of crustacean fisheries and aquaculture in global food security: Past, present and future Melba G. Bondad-Reantaso, Rohana P. Subasinghe, Helga Josupeit, Junning Cai, Xiaowei Zhou Show preview | PDF (1238 K) | Related articles | Related reference work articles Graphical abstract

Highlights

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► Crustaceans are valuable sources of aquatic food protein. ► Production and trade are significant economic activities for developing countries. ► Important sustainability issues include shrimp fisheries, trade and aquaculture. ► Crustaceans positively contribute to food security in both producing and exporting countries.

Historic emergence, impact and current status of shrimp pathogens in Asia Timothy W. Flegel Show preview | PDF (1359 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Cultivation of domesticated, exotic whiteleg shrimp now dominates in Asia. ► Cultivation operates under biosecure conditions and global aquaculture practice. ► These changes have greatly reduced losses to shrimp viral pathogens. ► The most serious remaining disease threat is from white spot syndrome virus. ► Other disease threats depend on geographical location and shrimp species cultivated.

Historic emergence, impact and current status of shrimp pathogens in the Americas D.V. Lightner, R.M. Redman, C.R. Pantoja, K.F.J. Tang, B.L. Noble, P. Schofield, L.L. Mohney, L.M. Nunan, S.A. Navarro Show preview | PDF (1204 K) | Related articles | Related reference work articles Graphical abstract Schematic of the major viruses of penaeid shrimp. The virions are drawn to scale; scale divisions are 20 nm. IHHNV = Infectious hypodermal and hematopoietic necrosis virus; HPV = hepatopancreatic parvovirus; WSSV = White spot syndrome virus; BP = Baculovirus penaei, MBV = Penaeus monodon-type baculovirus; BMN = baculoviral midgut gland necrosis; TSV = Taura syndrome virus; IMNV = infectious myonecrosis virus; YHV = Yellow head virus; GAV = Gill associated virus; and LOV = lymphoid organ virus.

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Highlights ► Six of 8 OIE listed crustacean diseases are viral or bacterial diseases of penaeid shrimp. ► WSSV resistant lines of Penaeus vannamei, have been developed. ► Domestication of SPF/SPR stocks of P. vannamei led to its global dominance in shrimp aquaculture.

Global transboundry disease politics: The OIE perspective D.V. Lightner Show preview | PDF (218 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► The World Animal Health Organization was formerly the Office International des Epizooties (OIE). ► The OIE is recognized by the WTO as the reference body for animal health in relation to global trade. ► The OIE is responsible for informing members of the occurrence & spread of listed & emerging diseases. ► Terrestrial and aquatic animal diseases are under the purview of the OIE.

Costs and benefits of freedom from shrimp diseases in the European Union Edmund J. Peeler Show preview | PDF (328 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Important penaeid diseases are notifiable in the EU and listed by OIE. ► Import risk analysis (IRA) justifies sanitary measures necessary for disease freedom. ► Claim of TSV and YHD freedom in the EU would be strengthened by a commodity IRA. ► Decisions about WSSV status must balance the interests of all stakeholders. ► WSSV free compartments will facilitate the development of penaeid aquaculture. Aquaculture Journals Page: 138 of 169

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Transboundary movement of shrimp viruses in crustaceans and their products: A special risk? Brian Jones Show preview | PDF (188 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Spread of diseases through trade in non-viable crustacean products is of concern. ► Frozen product is freely available through international trade. ► New diseases will be traded before the OIE process for listing diseases is initiated. ► Measures to reduce risk must centre on preventing diversion of product.

Protistan parasites as mortality drivers in cold water crab fisheries J. Frank Morado, M.S.M. Siddeek, Darrell R. Mullowney, Earl G. Dawe Show preview | PDF (1565 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► We review the potential of protistan pathogens as drivers of significant mortality in wild coldwater crab species. ► We submit that the data are not clear because baseline disease data are generally absent. ► We indicate that where data may be available, epizootiological studies are incomplete with respect to the factors examined. ► We propose that disease data needs to be gathered with the final intent to model disease impacts on populations. ► We also propose that the current epidemiological triad model may be impeding studies because it is too simplistic in nature.

The impact of pathogens on exploited populations of decapod crustaceans Jeffrey D. Shields

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Show preview | PDF (2136 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Several crab and lobster fisheries have been affected by outbreaks of disease. ► Multiple stressors, including fishing pressure, are contributing factors. ► A range in microbial and parasitic pathogens is involved. ► Prominent physiographic features facilitate transmission dynamics during outbreaks. ► Models show additional indirect effects of pathogens on the fished populations.

::Diseases of wild and cultured juvenile crustaceans: Insights from below the minimum landing size Donald C. Behringer Show preview | PDF (742 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Crustaceans are exceptionally valuable fishery and aquaculture organisms. ► Many crustacean pathogens show an affinity for juveniles. ► Juveniles are often underrepresented in studies of crustacean diseases. ► Diseases can have strong effects on fisheries through ecological impacts. ► Stock assessments should incorporate more information on juveniles and disease.

Hamish J. Small Show preview | PDF (1329 K) | Related articles | Related reference work articles Graphical abstract

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Highlights ► Hematodinium spp. are parasitic dinoflagellates that infect both wild and aquaculture crustaceans. ► Several hosts support important commercial fisheries. ► Two Hematodinium spp. infect hosts from the Northern Hemisphere. ► Three different Hematodinium perezi genotypes.

The role of selective breeding and biosecurity in the prevention of disease in penaeid shrimp aquaculture Shaun M. Moss, Dustin R. Moss, Steve M. Arce, Donald V. Lightner, Jeffrey M. Lotz Show preview | PDF (185 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Disease status of shrimp can be controlled using Specific Pathogen Free stocks. ► Selective breeding can improve TSV resistance in shrimp. ► Biofloc technology provides cost-effective biosecurity on shrimp farms.

The scope of the crustacean immune system for disease control Chris Hauton Show preview | PDF (973 K) | Related articles | Related reference work articles Graphical abstract

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Highlights ► Recent advances in our understanding of decapod immunity are summarised. ► Five avenues offer promise for mitigating disease, including studies of gut immunity. ► The potential of diverse pattern recognition and antimicrobial peptides are considered. ► Challenges to progress are identified, including the lack of cell lines and genomic data.

Nucleic-acid based antivirals: Augmenting RNA interference to ‘vaccinate’ Litopenaeus vannamei Lyric C. Bartholomay, Duan S. Loy, J. Dustin Loy, D.L. Harris Show preview | PDF (257 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► RNA interference revealed in arthropod-virus interactions. ► Exploring potential patterns to design effective RNAi triggers to control shrimp virus infections. ► Defending RNAi triggers as vaccines that confer long-term, specific immunity.

Ensuring crustacean product quality in the post-harvest phase Douglas M. Neil Show preview | PDF (615 K) | Related articles | Related reference work articles Graphical abstract

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Highlights ► Norway lobsters stressed by trawl capture have strong physiological recovery mechanisms. ► On-board recovery procedures improve survival rates and mitigate against myonecrosis. ► Post-capture handling time window is non-detrimental to preserving chilled products. ► Infections by Hematodinium affect product quality, as assessed organoleptically. ► Mitigating procedures in harvesting of wild-caught crustaceans promote sustainability.

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VOLUME 89, PART 2, MAY 2012 Website

Research articles

High resolution melt analysis to track infections due to ribotype 027 Clostridium difficile Danilla Grando, Mohamed M. Said, Barrie C. Mayall, Volker Gurtler Show preview | PDF (1024 K) | Related articles | Related reference work articles Highlights ► PCR ribotyping was compared to high-resolution melt analysis (HRM-ribotyping). ► HRM-ribotyping identified a cluster containing 027 strains. ► HRM-ribotyping typed organisms within 2–3 h of colony isolation.

Simple DNA transformation in Pseudomonas based on the Yoshida effect Jerónimo Rodríguez-Beltrán, Hamouda Elabed, Kamel Gaddour, Jesús Blázquez, Alexandro Rodríguez-Rojas Show preview | PDF (362 K) | Related articles | Related reference work articles Highlights ► Efficient plasmid transformation protocol for Pseudomonas sp. ► The method do not require competent cell preparation. ► Cells at any physiological state can be used. ► The procedure is performed directly on agar plates. ► Advantages for high throughput screenings.

A rapid microtiter plate serum bactericidal assay method for determining serum complement-mediated killing of Mannheimia haemolytica Sahlu Ayalew, Anthony W. Confer, Binu Shrestha, Mark E. Payton Show preview | PDF (309 K) | Related articles | Related reference work articles Highlights A rapid microtiter plate serum bactericidal assay method for determining serum complement-mediated killing of Mannheimia haemolytica is a protocol that ► Measures the functionality of an immune response. ► Quantifies serum bactericidal activity of an immune serum response in a fairly short time. ► Enables assays to be performed in a microtiter plate and results read with plate reader eliminating human error. ► Is reproducible and cost effective.

Staining of Bartonella henselae with carboxyfluorescein diacetate succinimidyl ester for tracking infection in erythrocytes and epithelial cells Congli Yuan, Caixia Zhu, Yajie Bai, Xiaowei Yang, Xiuguo Hua Show preview | PDF (776 K) | Related articles | Related reference work articles Highlights ► A dye, carboxyfluorescein diacetate succinimidyl ester, was used to label the Bartonella bacillus. ► Stained Bartonella bacillus invade into erythrocytes and epithelial cells efficiently. ► This method offered us a convenient way to track Bartonella infection in host cells without using antibody.

Prepartum vaginal/anorectal Group B Streptococcus screening: Improvement of the enrichment step by the broth additive RambaQUICK StrepB Aquaculture Journals Page: 144 of 169

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Didier-Marc Poisson, Marie-Liesse Evrard Show preview | PDF (200 K) | Related articles | Related reference work articles

Development of a high-throughput DNA microarray for drug-resistant gene detection and its preliminary application Yali Fu, Ying Pan, Mingjie Pan, Yao Wang, Wu Liu, Yuexi Li Show preview | PDF (910 K) | Related articles | Related reference work articles Highlights ► A high-throughput DNA microarray for drug-resistant genes detection was set up. ► The target genes were labeled by random primers using Klenow enzyme. ► The high- throughput DNA microarray had good specificity and sensitivity. ► The DNA microarray was used successfully for detecting clinical isolates.

Genome profiling (GP) as an effective tool for monitoring culture collections: A case study with Trichosporon Keiichi Hamano, Sachika Ueno-Tsuji, Reiko Tanaka, Motofumi Suzuki, Kazuko Nishimura, Koichi Nishigaki Show preview | PDF (966 K) | Supplementary content | Related articles | Related reference work articles Highlights ► False labeling contained in a Trichosporon culture collection was revealed simply by the GP method. ► Classification of Trichosporon species/strains could be readily performed based on the GP results. ► The GP approach was estimated to be more cost-effective and time- saving than the sequencing one.

Rapid detection of methicillin-resistant Staphylococcus aureus in screening samples by relative quantification between the mecA gene and the SA442 gene Lonneke G.M. Bode, Perry van Wunnik, Norbert Vaessen, Paul H.M. Savelkoul, Leo C. Smeets Show preview | PDF (207 K) | Related articles | Related reference work articles Highlights ► A mecA and S. aureus-specific (SA442) PCR can be combined to screen for MRSA. ► We aimed to improve the SA442/mecA PCR to identify MRSA in screening samples. ► Relative quantification (RQ) of SA442/mecA PCR detects MRSA with high sensitivity. ► Specificity is comparable to other SCCmec-based PCR tests. ► RQ-PCR will also detect exceptional SCCmec types, i.e., of veterinary origin.

Robustness of two MALDI-TOF mass spectrometry systems for bacterial identification Etienne Carbonnelle, Patrick Grohs, Hervé Jacquier, Nesrine Day, Sylvie Tenza, Alexandra Dewailly, Odile Vissouarn, Martin Rottman, Jean-Louis Herrmann, Isabelle Podglajen, Laurent Raskine Show preview | PDF (151 K) | Related articles | Related reference work articles

Use of RapidChek® SELECT™ Salmonella to detect shedding of live attenuated Salmonella enterica serovar Typhi vaccine strains Karen E. Brenneman, Caitlin McDonald, Sandra M. Kelly-Aehle, Kenneth L. Roland, Roy Curtiss III

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Show preview | PDF (1163 K) | Related articles | Related reference work articles Highlights ► The RapidChek method rapidly and accurately identifies samples containing S. Typhi. ► RapidChek was superior to traditional methods for detecting many S. Typhi vaccines. ► Vi capsule does not interfere with detection by RapidChek SELECT Salmonella. ► O-antigen mutations do not impair detection of S. Typhi strains by RapidChek.

HRM confirmation of Neisseria gonorrhoeae in clinical specimens by G → A (position 857) mutation detection in the 16S rRNA gene before sequencing and after porA confirmation Volker Gurtler, Barrie C. Mayall, Jenny Wang Show preview | PDF (444 K) | Related articles | Related reference work articles Highlights ► A method was developed to confirm N. gonorrhoeae by HRM RT-PCR of G857A. ► Screening by opaA RT-PCR gave an initial positivity rate of 0.88%. ► Initial confirmation by porA RT-PCR reduced the positivity rate to 0.49%. ► HRM of G857A reduced the positivity rate to 0.35% and 0.27%. ► Underlining the importance of HRM G857A N. gonorrhoeae secondary confirmation.

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VOLUME 89, PART 3, JUNE 2012 Website

Research articles

Arsenic interception by cell wall of bacteria observed with surface-enhanced Raman scattering Haixia Tian, Guoqiang Zhuang, Anzhou Ma, Chuanyong Jing Show preview | PDF (1045 K) | Supplementary content | Related articles | Related reference work articles Highlights ► As resistant bacteria from As-laden and As-free environments were cultured. ► The As(V) stress on bacteria could be identified with SERS, but not with FTIR. ► Cell wall and protoplast were separated in the SERS analysis. ► The bacteria resist As(V) through sequestration of As(V) by the cell wall. ► As(V) mainly interacts with polysaccharides and flavin derivates on the cell wall.

Core genome conservation of Staphylococcus haemolyticus limits sequence based population structure analysis Jorunn Pauline Cavanagh, Claus Klingenberg, Anne-Merethe Hanssen, Elizabeth Aarag Fredheim, Patrice Francois, Jacques Schrenzel, Trond Flægstad, Johanna Ericson Sollid Show preview | PDF (399 K) | Related articles | Related reference work articles

A PCR-free cloning method for the targeted φ80 Int-mediated integration of any long DNA fragment, bracketed with meganuclease recognition sites, into the Escherichia coli chromosome Anna A. Ublinskaya, Valeriy V. Samsonov, Sergey V. Mashko, Nataliya V. Stoynova Show preview | PDF (851 K) | Related articles | Related reference work articles

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Highlights ► The method for the precise cloning of any long DNA fragments was developed. ► PCR- amplification of long DNA fragment is not required for cloning. ► The method allows targeted insertion of cloned DNA into any locus of E. coli. ► The insert can be multiplied a in step-wise fashion by repeated integrations. ► The method is useful for design of industrial strains and bacterial genome study.

High-throughput species identification of enterococci using pyrosequencing Rahat Zaheer, L. Jay Yanke, Deirdre Church, Edward Topp, Ronald R. Read, Tim A. McAllister Show preview | PDF (760 K) | Related articles | Related reference work articles

Development of a visual loop-mediated isothermal amplification method for rapid detection of the bacterial pathogen Pseudomonas putida of the large yellow croaker (Pseudosciaena crocea) Zhijuan Mao, Yangyu Qiu, Lei Zheng, Jigang Chen, Jifang Yang Show preview | PDF (549 K) | Related articles | Related reference work articles Highlights ► A visual LAMP assay for rapid detection of Pseudomonas putida is developed. ► The assay is sensitive with a detection limit of 4.8 cfu per reaction. ► It is highly specific to discriminate all P. putida isolates from other strains. ► It successfully detected the pathogen DNA in tissues of infected fish.

Evaluation of four RNA extraction methods for gene expression analyses of Cryptosporidium parvum and Toxoplasma gondii oocysts Mary J. See, Sarah E. Staggs, J.P. Dubey, Eric N. Villegas Show preview | PDF (379 K) | Related articles | Related reference work articles Highlights ► Performances of 4 RNA extraction kits were evaluated on coccidian oocysts. ► DNase I treatment is necessary to improve mRNA quality from all kits tested. ► The study developed an mRNA extraction procedure for oocyst transcriptome analysis.

The first performance report for the Bio-Rad Dx CT/NG/MG assay for simultaneous detection of Chlamydia trachomatis, Neisseria gonorrhoeae and Mycoplasma genitalium in urogenital samples Chloé Le Roy, Isabelle Le Hen, Maïthé Clerc, Véronique Arfel, Françoise Normandin, Cécile Bébéar, Bertille de Barbeyrac Show preview | PDF (187 K) | Related articles | Related reference work articles

Growth of Yersinia enterocolitica and Y. pseudotuberculosis in Yersinia selective enrichment broth according to Ossmer Aruni Premaratne, Teresa Wilson, Nicola King, J. Andrew Hudson Show preview | PDF (136 K) | Related articles | Related reference work articles Highlights ► YSEO allowed for the enrichment of both Y. enterocolitica and Y. pseudotuberculosis. ► The medium allowed all of the strains tested to grow comparably. ► The concentration of both species achieved after 24 h enrichment at 24 °C was always > 106 CFU/ml.

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Targeted gene engineering in Clostridium cellulolyticum H10 without methylation Gu-zhen Cui, Wei Hong, Jie Zhang, Wen-li Li, Yingang Feng, Ya-jun Liu, Qiu Cui Show preview | PDF (461 K) | Supplementary content | Related articles | Related reference work articles Highlights ► A methylation-free genetic platform was developed in Clostridium cellulolyticum H10. ► The platform has high transformation efficiency, screening rate and stability. ► The mutant H10∆mspI lost MspI activity and accepted unmethylated DNA efficiently. ► H10∆mspI is capable of heterologous gene expression and serial gene inactivation. ► An anaerobic green fluorescent reporter system was constructed in H10∆mspI.

A method for determining alkaline phosphatase activity in marine phytoplankton using spectrofluorometry Melissa Blakely Peacock, Raphael M. Kudela Show preview | PDF (309 K) | Related articles | Related reference work articles Highlights ► We determine phytoplankton alkaline phosphatase activity by spectrofluorometry. ► Statistical output is increased with spectrofluorometry. ► Spectrofluorometry measurement is effective for cultured and natural populations. ► We conduct method inter-comparison with microscopy and flow cytometry. ► Spectrofluorometry is better than microscopy at determining labeling intensity.

A simple and cost-effective cover-glass test for the differentiation between staphylococci and micrococci in clinical laboratory Oto Melter, Jan Tkadlec, Ivo Sedláček Show preview | PDF (212 K) | Related articles | Related reference work articles

A comparison of TO-PRO-1 iodide and 5-CFDA-AM staining methods for assessing viability of planktonic algae with epifluorescence microscopy Elena Gorokhova, Lisa Mattsson, Annica M. Sundström Show preview | PDF (517 K) | Related articles | Related reference work articles Highlights ► We compared TO-PRO-1 iodide and 5-CFDA-AM for LIVE/DEAD assessment of algae. ► Using radiation-killed cells, test mixtures with 0–100% dead cells were prepared. ► Viability was estimated with epifluorescence microscopy and microplate growth assay. ► Whereas TO-PRO-1 provided accurate estimate, CFDA underestimated viability by ~ 25%. ► Staining with TO-PRO-1 was not affected by a storage for ≤ 1 month in − 80 °C.

Medium-throughput profiling method for screening polysaccharide-degrading enzymes in complex bacterial extracts Maude Fer, Aurélie Préchoux, Andréa Leroy, Jean-François Sassi, Marc Lahaye, Claire Boisset, Pi Nyvall-Collén, William Helbert Show preview | PDF (1407 K) | Supplementary content | Related articles | Related reference work articles Highlights ► We have implemented a screening method for polysaccharide degrading enzymes occurring in complex bacterial extracts. ► Variation of profiles of enzyme activities could be observed as a function of culture conditions. ► Using a wide collection of polysaccharides, the screening allowed highlighting new enzyme activity.

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VOLUME 90, PART 1, JULY 2012 Website

Research articles

Development of a genomic site for gene integration and expression in Enterococcus faecalis Sruti DebRoy, Ransome van der Hoeven, Kavindra V. Singh, Peng Gao, Barrett R. Harvey, Barbara E. Murray, Danielle A. Garsin Show preview | PDF (1167 K) | Related articles | Related reference work articles Highlights ► A vector was designed to allow integration of DNA into a specific site in the E. faecalis genome. ► The method bypasses the need to maintain antibiotic pressure for expression of genes of interest. ► Using this system, we complimented a mutant in the EutVW two component system. ► An E. faecalis strain that stably and evenly produces green fluorescent protein (GFP) was created. ► The gfp-expressing strain was identical to wild type for in vitro growth and killing of C. elegans and mice.

Enhanced analysis of bacteria susceptibility in connected biofilms Stacy Sommerfeld Ross, Joseph M. Reinhardt, Jennifer Fiegel Show preview | PDF (1158 K) | Supplementary content | Related articles | Related reference work articles Graphical abstract

Highlights ► Connected-biofilm bacteria separated from unconnected bacteria in confocal images. ► Colocalization adjustment with membrane integrity stain maintained dead bacteria. ► Connected-biofilm bacteria and unconnected bacteria viability quantified separately.

Rapid detection of viable Bacillus pumilus SAFR-032 encapsulated spores using novel propidium monoazide-linked fluorescence in situ hybridization Bidyut R. Mohapatra, Myron T. La Duc Show preview | PDF (500 K) | Related articles | Related reference work articles Highlights ► Bacillus pumilus SAFR-032 spores were encapsulated in poly(methylmethacrylate). ► PMA was linked with FISH to determine encapsulated endospore viability. ► PMA–FISH selectively visualize and enumerate viable encapsulated endospores.

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Quantification of Pseudomonas aeruginosa hydrogen cyanide production by a polarographic approach Anne-Sophie Blier, Julien Vieillard, Eloïse Gerault, Audrey Dagorn, Tony Varacavoudin, Franck Le Derf, Nicole Orange, Marc Feuilloley, Olivier Lesouhaitier Show preview | PDF (858 K) | Related articles | Related reference work articles

Can dead bacterial cells be defined and are genes expressed after cell death? J.T. Trevors Show preview | PDF (150 K) | Related articles | Related reference work articles Highlights ► Can dead bacterial cells be defined? ► How does the presence of viable but non- culturable bacterial cells impact upon the definition of dead cells? ► Does gene expression continue after bacterial cells are dead?

Identification of non-specific hybridization using an empirical equation fitted to non-equilibrium dissociation curves Samuel W. Baushke, Robert D. Stedtfeld, Dieter M. Tourlousse, Farhan Ahmad, Lukas M. Wick, Erdogan Gulari, James M. Tiedje, Syed A. Hashsham Show preview | PDF (679 K) | Related articles | Related reference work articles Highlights ► Automated empirical modeling approach for analysis of high-throughput microarrays ► Identification of non-specific microarray signals using a new parameter (Td-w/Tm) ► Method does not rely on comparison of perfect match and mismatch dissociations. ► Evaluated three datasets with the new parameter

An in silico chimeric multi subunit vaccine targeting virulence factors of enterotoxigenic Escherichia coli (ETEC) with its bacterial inbuilt adjuvant Shahram Nazarian, Seyed Latif Mousavi Gargari, Iraj Rasooli, Jafar Amani, Samane Bagheri, Masoome Alerasool Show preview | PDF (1475 K) | Related articles | Related reference work articles Highlights ► Enterotoxigenic Escherichia coli (ETEC) is responsible for many diarrheal diseases. ► Enterotoxin and colonization are the major virulence factors in ETEC. ► A chimeric multi subunit vaccine was designed against virulence factors of ETEC. ► In silico structure and immunogenicity of the chimeric vaccine was predicted. ► Chimeric protein epitopes could induce B-cell and T-cell mediated immune responses.

DNA binding site analysis of Burkholderia thailandensis response regulators Kristy L. Nowak-Lovato, Alexana J. Hickmott, Tuhin S. Maity, Martha L. Bulyk, John Dunbar, Elizabeth Hong-Geller Show preview | PDF (1083 K) | Related articles | Related reference work articles Highlights ► Use of protein-binding microarray to identify response regulator DNA binding sites ► DNA binding sites were validated for the Burkholderia thailandensis KdpE and NarL. ► Identical DNA binding site found in orthologous Burkholderia response regulators ► DNA binding sites found upstream of itself or other response regulators ► Response regulators regulate gene expression of self and other two component systems.

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Methodologies for screening of bacteria–carbohydrate interactions: Anti- adhesive milk oligosaccharides as a case study Jonathan A. Lane, Karina Mariño, Pauline M. Rudd, Stephen D. Carrington, Helen Slattery, Rita M. Hickey Show preview | PDF (402 K) | Related articles | Related reference work articles Highlights ► Methodology to screen glycans for potential anti-infective activity against bacteria. ► Successfully validated the proposed methodology by inhibition studies with HT-29 cells. ► Identified 37 potential anti-infective glycans in bovine colostrum. ► Demonstrated E. coli interactions with 3′-sialyllactose, disialyllactose, and sialyllactosamine. ► Colostral oligosaccharides and 3′-sialyllactose prevent E. coli adhesion to HT-29 cells.

Fine visualization of filamentous structures in the bacterial cytoplasm Takashi Nakano, Hiroaki Aoki, Hong Wu, Yoshihiko Fujioka, Eiko Nakazawa, Kouichi Sano Show preview | PDF (1142 K) | Related articles | Related reference work articles Highlights ► We improved the protocol to observe cytoplasmic filaments in bacteria. ► It was to displace cytoplasmic granules to form an ice window in the cell. ► It could be applied to immunoelectron microscopy (EM) and EM tomography.

Culture media for differential isolation of Lactobacillus casei Shirota from oral samples Justyna Sutula, Lisa Coulthwaite, Joanna Verran Show preview | PDF (402 K) | Related articles | Related reference work articles Highlights ► ‘LcS Select’ medium is suitable for isolation of L. casei Shirota from oral samples. ► ‘LcS Select’ is a novel formulation and is simple to prepare. ► The medium allows development of LcS-specific colony morphologies. ► LcS Select supports a differential growth of vancomycin resistant lactobacilli. ► The agar is suitable for quantification of LcS from samples in intervention studies.

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VOLUME 29, PART 4, DECEMBER 2010 Website

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VOLUME 43, PART 2, APRIL 2012 Website

No new issue available

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VOLUME 54, PART 5, MAY 2012 Website

Research articles

Original Articles

Statistical optimization of simple culture conditions to produce biomass of an ochratoxigenic mould biocontrol yeast strain (pages 377–382) R. Pelinski, P. Cerrutti, M.L. Ponsone, S. Chulze and M. Galvagno Abstract Full Article (HTML) PDF(189K) References

Silver nanoparticles: influence of stabilizing agent and diameter on antifungal activity against Candida albicans and Candida glabrata biofilms (pages 383–391) D.R. Monteiro, S. Silva, M. Negri, L.F. Gorup, E.R. de Camargo, R. Oliveira, D.B. Barbosa and M. Henriques Abstract Full Article (HTML) PDF(1780K) References

Addition of a surfactant to tryptic soy broth allows growth of a Lactic Acid Bacteria food antimicrobial, Escherichia coli O157:H7, and Salmonella enterica (pages 392–397) T.F. Cálix-Lara, T. Duong and T.M. Taylor Abstract Full Article (HTML) PDF(290K) References

Transfer and subsequent growth and metabolism of Lactobacillus plantarum in orange juice medium during storage at 4 and 30°C (pages 398–403) M.B. Perez and F.M. Saguir Abstract Full Article (HTML) PDF(153K) References

Functional expression of mouse insulin-like growth factor-I with food-grade vector in Lactococcus lactis NZ9000 (pages 404–409) G. Gao, J.-J. Qiao, C.-H. Yang, D.-Z. Jiang, R.-Q. Li, J.-J. Su, H.-J. Xu, X.-M. Zhang, Y.-L. Bai and M.-Q. Qiao Abstract Full Article (HTML) PDF(194K) References Supporting Information

Bioactive stilbenes from a Bacillus sp. N strain associated with a novel rhabditid entomopathogenic nematode (pages 410–417) S.N. Kumar, J.V. Siji, K.N. Rajasekharan, B. Nambisan and C. Mohandas Abstract Full Article (HTML) PDF(253K) References

Growth and ochratoxin A production by Aspergillus carbonarius at different pHs and grape maturation stages (pages 418–424) S. Lasram, A. Barketi, A. Mliki and A. Ghorbel Abstract Full Article (HTML) PDF(180K) References

Comparative analysis of the roles of catalases KatB and KatG in the physiological fitness and pathogenesis of fish pathogen Edwardsiella tarda (pages 425–432) J. Xiao, T. chen, Q. Wang and Y. Zhang Abstract Full Article (HTML) PDF(940K) References

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A novel PCR-based approach for the detection and classification of potential cellulolytic fungal strains isolated from museum items and surrounding indoor environment (pages 433–440) L. Kraková, K. Chovanová, A. Puškarová, M. Bučková and D. Pangallo Abstract Full Article (HTML) PDF(373K) References

Effect of the C-terminal domain of Vibrio proteolyticus chitinase A on the chitinolytic activity in association with pH changes (pages 441–446) S. Itoi, Y. Kanomata, S. Uchida, K. Kadokura, T. Nishio, T. Oku and H. Sugita Abstract Full Article (HTML) PDF(247K) References Supporting Information

Modelling bacterial transmission in human allergen-specific IgE sensitization (pages 447–454) K. Rudi, O. Storrø, T. Øien and R. Johnsen Abstract Full Article (HTML) PDF(473K) References

Aureocin A70 production is disseminated amongst genetically unrelated Staphylococcus aureus involved in bovine mastitis (pages 455–461) H. Ceotto, R.C. da Silva Dias, J. dos Santos Nascimento, M.A.V. de Paiva Brito, M. Giambiagi-deMarval and M. do Carmo de Freire Bastos Abstract Full Article (HTML) PDF(251K) References

Airborne enteric micro-organisms and ammonia levels in diaper-changing rooms in kindergartens (pages 462–467) P.E. Vaattovaara, M. Kivimäenpää, P. Vaattovaara, P. Pasanen and H. Heinonen-Tanski Abstract Full Article (HTML) PDF(104K) References

Detection and expression of enterotoxin genes in endophytic strains of Bacillus cereus (pages 468–474) R.L. Melnick, A.L. Testen, A.M. Poleatewich, P.A. Backman and B.A. Bailey Abstract Full Article (HTML) PDF(116K) References Supporting Information

Antimicrobial efficacy of the alkaloid harmaline alone and in combination with chlorhexidine digluconate against clinical isolates of Staphylococcus aureus grown in planktonic and biofilm cultures (pages 475–482) M. Xing, F. Shen, L. Liu, Z. Chen, N. Guo, X. Wang, W. Wang, K. Zhang, X. Wu, X. Wang, Y. Li, S. Sun and L. Yu Abstract Full Article (HTML) PDF(376K) References

NOTE TO THE EDITOR

In vitro antimalarial activity and molecular docking analysis of 4-aminoquinoline- clubbed 1,3,5-triazine derivatives (pages 483–486) H.R. Bhat, S.K. Ghosh, A. Prakash, K. Gogoi and U.P. Singh Abstract Full Article (HTML) PDF(94K) References Supporting Information

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VOLUME 54, PART 6, JUNE 2012 Website

Research articles

Selection of promising fungal biological control agent of the western flower thrips Frankliniella occidentalis (Pergande) (pages 487–493)

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S. Niassy, N.K. Maniania, S. Subramanian, L.M. Gitonga, D.M. Mburu, D. Masiga and S. Ekesi Abstract Full Article (HTML) PDF(303K) References

Detection of Vibrio parahaemolyticus in shellfish using polymerase chain reaction–enzyme-linked immunosorbent assay (pages 494–498) A. Di Pinto, V. Terio, P. Di Pinto, V. Colao and G. Tantillo Abstract Full Article (HTML) PDF(110K) References

Recovery of E. coli O157 strains after exposure to acidification at pH 2 (pages 499–503) K.J. Yoshitomi, R. Zapata, K.C. Jinneman, S.D. Weagant and W. Fedio Abstract Full Article (HTML) PDF(172K) References

The effects of environmental conditions on persistence and inactivation of Brucella suis on building material surfaces (pages 504–510) M. Worth Calfee and M. Wendling Abstract Full Article (HTML) PDF(152K) References

Anti-biofilm activity of Quercus infectoria G. Olivier against methicillin-resistant Staphylococcus aureus (pages 511–517) S. Chusri, P. Na Phatthalung and S.P. Voravuthikunchai Abstract Full Article (HTML) PDF(993K) References

Methicillin-resistant Staphylococcus aureus ST398 contamination and transmission in pigs after a low dose inoculation (pages 518–523) E. Jouy, A. Le Roux, A. Kéranflec’h, S. A. Granier, F. Laurent, I. Kempf, A. Brisabois, R. Cariolet and C. Chauvin Abstract Full Article (HTML) PDF(133K) References

Reduction in Listeria monocytogenes and spoilage bacteria on smoked catfish using X-ray treatments (pages 524–529) B.S.M. Mahmoud, R. Coker and Y.-C. Su Abstract Full Article (HTML) PDF(112K) References

The culturable bacterial community of frass produced by larvae of Rhynchophorus ferrugineus Olivier (Coleoptera: Curculionidae) in the Canary island date palm (pages 530–536) G. Butera, C. Ferraro, S. Colazza, G. Alonzo and P. Quatrini Abstract Full Article (HTML) PDF(117K) References

Quantifying dental biofilm growth using cross-polarization optical coherence tomography (pages 537–542) R. Chen, J. Rudney, C. Aparicio, A. Fok and R.S. Jones Article first published online: 10 APR 2012 | DOI: 10.1111/j.1472-765X.2012.03243.x Abstract Full Article (HTML) PDF(305K) References

A transient expression assay for the in planta efficacy screening of an antimicrobial peptide against grapevine bacterial pathogens (pages 543–551) M. Visser, D. Stephan, J.M. Jaynes and J.T. Burger Abstract Full Article (HTML) PDF(335K) References Supporting Information

Whey protein coating bead improves the survival of the probiotic Lactobacillus rhamnosus CRL 1505 to low pH (pages 552–556) C.L. Gerez, G. Font de Valdez, M.L. Gigante and C.R.F. Grosso

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Abstract Full Article (HTML) PDF(333K) References

Antibacterial activity of wine phenolic compounds and oenological extracts against potential respiratory pathogens (pages 557–563) C. Cueva, S. Mingo, I. Muñoz-González, I. Bustos, T. Requena, R. del Campo, P.J. Martín- Álvarez, B. Bartolomé and M.V. Moreno-Arribas Abstract Full Article (HTML) PDF(247K) References

NOTES TO THE EDITOR

Antimicrobial efficacy of alcohol-based hand gels with a 30-s application (pages 564–567) M.F. do Prado, A.C.C. Coelho, J.P.B. de Brito, D.O. Ferreira, A.W. Junior, C. da Silva Menecucci, A.B. de Queiroz, L.B. Garcia, C.L. Cardoso and M.C.B. Tognim Abstract Full Article (HTML) PDF(92K) References

Bi-fluorescence imaging for estimating accurately the nuclear condition of Rhizoctonia spp. (pages 568–571) F. Guermache, M. Rodier-Goud, A. Caesar, C. Héraud and M.-C. Bon Abstract Full Article (HTML) PDF(203K) References

Antimicrobial susceptibility and genetic relatedness of bovine Stenotrophomonas maltophilia isolates from a mastitis outbreak (pages 572–576) M. Ohnishi, T. Sawada, K. Marumo, K. Harada, K. Hirose, A. Shimizu, M. Hayashimoto, R. Sato, N. Uchida and H. Kato Abstract Full Article (HTML) PDF(108K) References Supporting Information

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VOLUME 159, PART 5, MAY 2012 Website

Research articles

Original Paper

The effects of symbiotic state on heterotrophic feeding in the temperate sea anemone Anthopleura elegantissima Terra C. Hiebert and Brian L. Bingham Download PDF (621.0 KB) View HTML

Differences in resource utilization and behaviour between coexisting Jassa species (Crustacea, Amphipoda) Jan Beermann and Heinz-Dieter Franke Download PDF (375.4 KB) View HTML

Do regular sea urchins show preference in which part of the body they orient forward in their walk? Kazuya Yoshimura, Tomoaki Iketani and Tatsuo Motokawa Download PDF (346.4 KB) View HTML

Reducing per capita food supply alters urchin condition and habitat Juan P. Livore and Sean D. Connell Download PDF (323.6 KB) View HTML

Is the Great Barracuda (Sphyraena barracuda) a reef fish or a pelagic fish? The phylogeographic perspective Toby S. Daly-Engel, John E. Randall and Brian W. Bowen Download PDF (724.0 KB) View HTML

Particle sorting and formation and elimination of pseudofaeces in the bivalves Mulinia edulis (siphonate) and Mytilus chilensis (asiphonate) M. V. Garrido, O. R. Chaparro, R. J. Thompson, O. Garrido and J. M. Navarro Download PDF (1.6 MB) View HTML Supplemental

Fitness benefits of size-dependent diet switching in a marine herbivore Jane E. Williamson and Peter D. Steinberg Download PDF (443.0 KB) View HTML

Strong site fidelity and longer internesting interval for solitary nesting olive ridley sea turtles in Brazil Lélia Matos, Augusto C. C. D. Silva, Jaqueline C. Castilhos, Marilda I. Weber and Luciano S. Soares, et al. Download PDF (402.4 KB) View HTML

Phylogeography of the seaweed Ishige okamurae (Phaeophyceae): evidence for glacial refugia in the northwest Pacific region Kyung Min Lee, Eun Chan Yang, James A. Coyer, Giuseppe C. Zuccarello and Wei-Lui Wang, et al. Download PDF (508.6 KB) View HTML Supplemental

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Correlation between the seasonal distribution of harbour porpoises and their prey in the Sound, Baltic Sea Signe Sveegaard, Heidi Andreasen, Kim N. Mouritsen, Jens Peder Jeppesen and Jonas Teilmann, et al. Download PDF (513.3 KB) View HTML

In situ rates of body growth and palp regeneration of a spionid polychaete following simulated sublethal predation John Allen Matthews and Brian T. Hentschel Download PDF (397.3 KB) View HTML

Low levels of global genetic differentiation and population expansion in the deep-sea teleost Hoplostethus atlanticus revealed by mitochondrial DNA sequences Andrea I. Varela, Peter A. Ritchie and Peter J. Smith Download PDF (514.9 KB) View HTML

Invading Aurelia aurita has established scyphistoma populations in the Caspian Sea Sergei Korsun, José F. Fahrni and Jan Pawlowski Download PDF (401.5 KB) View HTML Supplemental

Selfing in Parvulastra exigua: an asterinid sea star with benthic development Sergio S. Barbosa, O. Selma Klanten, Hugh Jones and Maria Byrne Download PDF (364.3 KB) View HTML

Megafaunal-habitat associations at a deep-sea coral mound off North Carolina, USA Andrea M. Quattrini, Steve W. Ross, Michael C. T. Carlson and Martha S. Nizinski Download PDF (1.1 MB) View HTML Supplemental

Seasonal patterns in fatty acids of Calanus hyperboreus (Copepoda, Calanoida) from Cumberland Sound, Baffin Island, Nunavut Bailey C. McMeans, Michael T. Arts, Scott A. Rush and Aaron T. Fisk Download PDF (584.7 KB) View HTML

Catalytic properties and polymorphism of serine endopeptidases from the midgut gland of the brown shrimp Crangon crangon (Decapoda, Caridea) Reinhard Saborowski, Jessica Schatte and Luis Gimenez Download PDF (580.5 KB) View HTML

Evolution, radiation and chemotaxonomy of Lamellodysidea, a demosponge genus with anti-plasmodial metabolites Dirk Erpenbeck, John N. A. Hooper, Isabelle Bonnard, Patricia Sutcliffe and Mayuri Chandra, et al. Download PDF (782.0 KB) View HTML Supplemental

Tolerance of Mediterranean seagrasses (Posidonia oceanica and Cymodocea nodosa) to hypersaline stress: water relations and osmolyte concentrations Jose Miguel Sandoval-Gil, Lázaro Marín-Guirao and Juan M. Ruiz Download PDF (457.6 KB) View HTML

The distribution of herbivorous fishes on the Great Barrier Reef Alistair Cheal, Michael Emslie, Ian Miller and Hugh Sweatman Download PDF (2.1 MB) View HTML

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Increasing heterogeneity of sensitive assemblages as a consequence of human impact in submarine caves Giuseppe Guarnieri, Antonio Terlizzi, Stanislao Bevilacqua and Simonetta Fraschetti Download PDF (449.4 KB) View HTML

Method

Identification of calanoid copepod prey species via molecular detection of carbon fixation genes Wilford B. Boling, Geoff A. Sinclair and Boris Wawrik Download PDF (356.0 KB) View HTML Supplemental

Short Communication

Observations on a school of ocean sunfish and evidence for a symbiotic cleaning association with albatrosses Takuzo Abe, Keiko Sekiguchi, Hiroji Onishi, Kota Muramatsu and Takehiko Kamito Download PDF (337.4 KB) View HTML

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VOLUME 159, PART 6, JUNE 2012 Website

Research articles

Original Paper

Inducible defenses in the eastern oyster Crassostrea virginica Gmelin in response to the presence of the predatory oyster drill Urosalpinx cinerea Say in Long Island Sound Joshua P. Lord and Robert B. Whitlatch Download PDF (308.9 KB) View HTML

The trophic ecology of two abundant mesopredators in south-east coastal waters of Tasmania, Australia Jonah L. Yick, Adam Barnett and Sean R. Tracey Download PDF (1.3 MB) View HTML

Parent–offspring dietary segregation of Cory’s shearwaters breeding in contrasting environments Hany Alonso, José P. Granadeiro, Vitor H. Paiva, Ana S. Dias and Jaime A. Ramos, et al. Download PDF (444.2 KB) View HTML

A new method to determine in situ growth rates of decapod shrimp: a case study with brown shrimp Crangon crangon R. Perger and A. Temming Download PDF (484.0 KB) View HTML

Copepodid and adult Argestidae Por, 1986 (Copepoda: Harpacticoida) in the southeastern Atlantic deep sea: diversity and community structure at the species level Lena Menzel and Kai Horst George Download PDF (1.1 MB) View HTML Supplemental

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Multi-marker estimate of genetic connectivity of sole (Solea solea) in the North- East Atlantic Ocean E. L. Cuveliers, M. H. D. Larmuseau, B. Hellemans, S. L. N. A. Verherstraeten and F. A. M. Volckaert, et al. Download PDF (705.0 KB) View HTML Supplemental

Distribution of foraging habitats of male loggerhead turtles (Caretta caretta) as revealed by stable isotopes and satellite telemetry Mariela Pajuelo, Karen A. Bjorndal, Kimberly J. Reich, Michael D. Arendt and Alan B. Bolten Download PDF (726.1 KB) View HTML Supplemental

Reference genes assessment for the seagrass Posidonia oceanica in different salinity, pH and light conditions Ilia Anna Serra, Chiara Lauritano, Emanuela Dattolo, Andrea Puoti and Silvia Nicastro, et al. Download PDF (390.6 KB) View HTML Supplemental

What catch data can tell us about the status of global fisheries Rainer Froese, Dirk Zeller, Kristin Kleisner and Daniel Pauly Download PDF (580.5 KB) View HTML

Regional-scale variation in the distribution and abundance of farming damselfishes on Australia’s Great Barrier Reef M. J. Emslie, M. Logan, D. M. Ceccarelli, A. J. Cheal and A. S. Hoey, et al. Download PDF (585.2 KB) View HTML Supplemental

Variability in nursery function of tropical seagrass beds during fish ontogeny: timing of ontogenetic habitat shift Yohei Nakamura, Keisuke Hirota, Takuro Shibuno and Yoshiro Watanabe Download PDF (480.4 KB) View HTML

Stable isotopes identify age- and sex-specific dietary partitioning and foraging habitat segregation in southern giant petrels breeding in Antarctica and southern Patagonia Andrea Raya Rey, Michael Polito, Diego Archuby and Néstor Coria Download PDF (408.8 KB) View HTML

Climatic effects on the growth of a temperate reef fish from the Southern Hemisphere: a biochronological approach B. M. Gillanders, B. A. Black, M. G. Meekan and M. A. Morrison Download PDF (430.7 KB) View HTML

Molecular prey identification in wild Octopus vulgaris paralarvae Álvaro Roura, Ángel F. González, Kevin Redd and Ángel Guerra Download PDF (495.0 KB) View HTML Supplemental

Identification and validation of novel SNP markers in European populations of marine Mytilus mussels Małgorzata Zbawicka, Agata Drywa, Beata Śmietanka and Roman Wenne Download PDF (456.4 KB) View HTML Supplemental

Activity patterns and predatory behavior of an intertidal nemertean from rocky shores: Prosorhochmus nelsoni (Hoplonemertea) from the Southeast Pacific Serena Caplins, Miguel Angel Penna-Diaz, Erick Godoy, Nelson Valdivia and J. M. Turbeville, et al. Download PDF (666.2 KB) View HTML Supplemental

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Method

Development of a new standardised method for sustainable monitoring of the vulnerable pink sea fan Eunicella verrucosa R. Coz, V. Ouisse, C. Artero, A. Carpentier and A. Crave, et al. Download PDF (893.7 KB) View HTML

Erratum

Erratum to: The use of clear-water non-estuarine mangroves by reef fishes on the Great Barrier Reef Lachlan Barnes, David R. Bellwood, Marcus Sheaves and Jennifer K. Tanner Download PDF (93.7 KB) View HTML

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VOLUME 14, PART 3, JUNE 2012 Website

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VOLUME 78, PART 2, MARCH 2012 Website

Research articles

Stock assessment and release strategy of red sea bream Pagrus major in Kagoshima Bay, Japan HIROTOSHI SHISHIDOU, AYUKO TAKIMOTO, YASUHIRO OBATA, KATSUYUKI HAMASAKI AND SHUICHI KITADA

Estimation of the spatial distribution of a Sargassum bed in Kuruminose, Yamaguchi, Japan, using an acoustic method KENJI MINAMI, AKIRA HAMANO, NAOKI TOJO, TAKESHI NAKAMURA, HIROKI YASUMA AND KAZUSHI MIYASHITA

Hydrodynamic characteristics of plane minnow netting made of high-strength polyethylene (Dyneema) TAISEI KUMAZAWA, FUXIANG HU, HIROMI KINOSHITA AND TADASHI TOKAI

Photosynthetic and temperature characteristics of five Sargassum species (Fucales), S. piluliferum, S. patens, S. fusiforme, S. crispifolium, and S. alternato- pinnatum from Kagoshima, Japan, using dissolved oxygen sensor and pulse- amplitude-modulated (PAM) fluorometer YUTARO TSUCHIYA, GREGORY N. NISHIHARA AND RYUTA TERADA

Genetic differentiation of the neon flying squid Ommastrephes bartramii between North Pacific and South Atlantic populations TOSHIE WAKABAYASHI, SHIRO WADA, YOUSUKE OCHI, TARO ICHII AND MITSUO SAKAI

Genetic differentiation of annual Zostera marina L. growing in Kagoshima Bay, Kagoshima, Japan based on an analysis using microsatellite markers HIROMORI SHIMABUKURO, MASAKAZU HORI, SATOSHI YOSHIMITSU, NARIMITSU TOKUNAGA, TADAMITSU IGARI, KENSUKE SASAKI, MASAHIRO NAKAOKA, MASAKO KAWANE, GORO YOSHIDA AND MASAMI HAMAGUCHI

Population genetic structure of the neon flying squid Ommastrephes bartramii inferred from mitochondrial DNA sequence analysis KOHEI KUROSAKA, TAKASHI YANAGIMOTO, TOSHIE WAKABAYASHI, YUYA SHIGENOBU, YOUSUKE OCHI AND HIROSHI INADA

Role of ocypodid crabs on carbon and nitrogen cycle in a tidal flat TAKAHITO OHZONO AND TOMOYUKI MIURA

Growth of Chionoecetes japonicus females west of the Oki Islands, Sea of Japan IKUKO YOSHO, TARO HIROSE AND SHIGERU SHIRAI

Feeding trial of red sea bream with dioxin-reduced fish oil TOMOKI HONRYO, HIROSHI YAMAMOTO, ATSUNORI KUMANISHI, HIDEKI HIROSE AND YOSHIFUMI SAWADA

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Recovery of nori Porphyra color by uptake of nutrients supplied intermittently from rivers SHUZO TAKAGI, YASUKO SHIMIZU, KOJI KUSAKA, TOKISHIGE FUJISAWA, MUNEHIRO FUJIWARA, YASUNORI WATANABE AND TATEKI FUJIWARA

Distribution and stranding records of the northern fur seal Callorhinus ursinus near Tsugaru Strait during winter and spring 2009 (Short Paper) TAKANORI HORIMOTO, YOKO MITANI, YUMI KOBAYASHI, KAORU HATTORI AND YASUNORI SAKURAI

N-Acyl homoserine lactone-producing abilities of intestinal bacteria from cultured Japanese smelt (Short Paper) CHIA-HUI CHEN, MASAYUKI OGAWA, KAZUYUKI SAGARA, SHIRO ITOI AND HARUO SUGITA

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VOLUME.4 , ISSUE 1, MARCH 2012 Website

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VOLUME 30, PART 5, MAY 2012 Website

Research articles

Forum: Science & Society

ELIXIR: a distributed infrastructure for European biological data Lindsey C. Crosswell, Janet M. Thornton Show preview | PDF (326 K) | Related articles | Related reference work articles

Reviews

Perspectives on cell reprogramming with RNA Jai-Yoon Sul, Tae Kyung Kim, Jae Hee Lee, James Eberwine Show preview | PDF (547 K) | Related articles | Related reference work articles

Have biopesticides come of age? Travis Glare, John Caradus, Wendy Gelernter, Trevor Jackson, Nemat Keyhani, Jürgen Köhl, Pamela Marrone, Louise Morin, Alison Stewart Show preview | PDF (351 K) | Supplementary content | Related articles | Related reference work articles

Proteins of higher fungi – from forest to application Jana Erjavec, Janko Kos, Maja Ravnikar, Tanja Dreo, Jerica Sabotič Show preview | PDF (1124 K) | Supplementary content | Related articles | Related reference work articles

Simultaneous co-fermentation of mixed sugars: a promising strategy for producing cellulosic ethanol Soo Rin Kim, Suk-Jin Ha, Na Wei, Eun Joong Oh, Yong-Su Jin Show preview | PDF (751 K) | Related articles | Related reference work articles

Applications of functionalized and nanoparticle-modified nanocrystalline cellulose Edmond Lam, Keith B. Male, Jonathan H. Chong, Alfred C.W. Leung, John H.T. Luong Show preview | PDF (1316 K) | Related articles | Related reference work articles

Electrospray–differential mobility analysis of bionanoparticles Suvajyoti Guha, Mingdong Li, Michael J. Tarlov, Michael R. Zachariah Show preview | PDF (711 K) | Related articles | Related reference work articles

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VOLUME 30, PART 6, JUNE 2012 Website

Research articles

Opinion

Constructing the electricity–carbohydrate–hydrogen cycle for a sustainability revolution Y.-H. Percival Zhang, Wei-Dong Huang Show preview | PDF (735 K) | Related articles | Related reference work articles

Reviews

Advances in shaking technologies Wolf Klöckner, Jochen Büchs Show preview | PDF (563 K) | Related articles | Related reference work articles

TiO2 nanotubes for bone regeneration Karla S. Brammer, Christine J. Frandsen, Sungho Jin Show preview | PDF (1235 K) | Supplementary content | Related articles | Related reference work articles

Inhibiting host–pathogen interactions using membrane-based nanostructures Daniel A. Bricarello, Mira A. Patel, Atul N. Parikh Show preview | PDF (2035 K) | Related articles | Related reference work articles

Novel advances in the design of three-dimensional bio-scaffolds to control cell fate: translation from 2D to 3D Edorta Santos, Rosa M. Hernández, José Luis Pedraz, Gorka Orive Show preview | PDF (1863 K) | Related articles | Related reference work articles

Distributed computation: the new wave of synthetic biology devices Javier Macía, Francesc Posas, Ricard V. Solé Show preview | PDF (1123 K) | Related articles | Related reference work articles

Process engineering of human pluripotent stem cells for clinical application Margarida Serra, Catarina Brito, Cláudia Correia, Paula M. Alves Show preview | PDF (622 K) | Related articles | Related reference work articles

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VOLUME 20, PART 4, APRIL 2012 Website

Research articles

Forum: Science & Society

Pertussis control: time for something new? Thomas A. Clark, Nancy E. Messonnier, Stephen C. Hadler Show preview | PDF (153 K) | Related articles | Related reference work articles

Opinions

Bacterial effector interplay: a new way to view effector function Stephanie R. Shames, B. Brett Finlay Show preview | PDF (463 K) | Related articles | Related reference work articles

Can the battle against tuberculosis gain from epigenetic research? Maria M. Esterhuyse, Heinz G. Linhart, Stefan H.E. Kaufmann Show preview | PDF (574 K) | Related articles | Related reference work articles

Reviews

Stress responses as determinants of antimicrobial resistance in Gram-negative bacteria Keith Poole Show preview | PDF (316 K) | Related articles | Related reference work articles

When the PilZ don’t work: effectors for cyclic di-GMP action in bacteria Robert P. Ryan, Tim Tolker-Nielsen, J. Maxwell Dow Show preview | PDF (539 K) | Related articles | Related reference work articles

Staphylococcus aureus determinants for nasal colonization Christopher Weidenmaier, Christiane Goerke, Christiane Wolz Show preview | PDF (1299 K) | Related articles | Related reference work articles

Methanogens: a window into ancient sulfur metabolism Yuchen Liu, Laura L. Beer, William B. Whitman Show preview | PDF (683 K) | Related articles | Related reference work articles

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