[4 + 2] Annulation and Enyne Cross Metathesis
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Elimination Reactions E1, E2, E1cb and Ei
Elimination Reactions Dr. H. Ghosh Surendranath College, Kol-9 ________________________________________________ E1, E2, E1cB and Ei (pyrolytic syn eliminations); formation of alkenes and alkynes; mechanisms (with evidence), reactivity, regioselectivity (Saytzeff/Hofmann) and stereoselectivity; comparison between substitution and elimination. Substitution Reactions Elimination Reactions Elimination happens when the nucleophile attacks hydrogen instead of carbon Strong Base favor Elimination Bulky Nucleophile/Base favor Elimination High Temperature favors Elimination We know- This equation says that a reaction in which ΔS is positive is more thermodynamically favorable at higher temperature. Eliminations should therefore be favoured at high temperature Keep in Mind---- Mechanism Classification E1 Mechanism- Elimination Unimolecular E1 describes an elimination reaction (E) in which the rate-determining step is unimolecular (1) and does not involve the base. The leaving group leaves in this step, and the proton is removed in a separate second step E2 Mechanism- Elimination Bimolecular E2 describes an elimination (E) that has a bimolecular (2) rate-determining step that must involve the base. Loss of the leaving group is simultaneous with removal of the proton by the base Bulky t-butoxide—ideal for promoting E2 as it’s both bulky and a strong base (pKaH = 18). Other Organic Base used in Elimination Reaction These two bases are amidines—delocalization of one nitrogen’s lone pair on to the other, and the resulting stabilization of the protonated amidinium ion, E1 can occur only with substrates that can ionize to give relatively stable carbocations—tertiary, allylic or benzylic alkyl halides, for example. E1-Elimination Reaction not possible here The role of the leaving group Since the leaving group is involved in the rate-determining step of both E1 and E2, in general, any good leaving group will lead to a fast elimination. -
Predicting Glycosylation Stereoselectivity Using Machine Learning† Cite This: Chem
Chemical Science View Article Online EDGE ARTICLE View Journal | View Issue Predicting glycosylation stereoselectivity using machine learning† Cite this: Chem. Sci.,2021,12,2931 ab a ab All publication charges for this article Sooyeon Moon, ‡ Sourav Chatterjee, ‡ Peter H. Seeberger have been paid for by the Royal Society and Kerry Gilmore §*a of Chemistry Predicting the stereochemical outcome of chemical reactions is challenging in mechanistically ambiguous transformations. The stereoselectivity of glycosylation reactions is influenced by at least eleven factors across four chemical participants and temperature. A random forest algorithm was trained using a highly reproducible, concise dataset to accurately predict the stereoselective outcome of glycosylations. The steric and electronic contributions of all chemical reagents and solvents were quantified by quantum mechanical calculations. The trained model accurately predicts stereoselectivities for unseen nucleophiles, electrophiles, acid catalyst, and solvents across a wide temperature range (overall root mean square error 6.8%). All predictions were validated experimentally on a standardized microreactor platform. The model helped to identify novel ways to control glycosylation stereoselectivity and Creative Commons Attribution 3.0 Unported Licence. Received 11th November 2020 accurately predicts previously unknown means of stereocontrol. By quantifying the degree of influence Accepted 24th December 2020 of each variable, we begin to gain a better general understanding of the transformation, for example that DOI: 10.1039/d0sc06222g environmental factors influence the stereoselectivity of glycosylations more than the coupling partners in rsc.li/chemical-science this area of chemical space. Introduction retrosynthesis,9 reaction performance10 and products,11,12 the identication of new materials and catalysts,13–15 as well as Predicting the outcome of an organic reaction generally enantioselectivity16,17 have been addressed. -
Aldol Reactions: E-Enolates and Anti-Selectivity
Utah State University DigitalCommons@USU All Graduate Plan B and other Reports Graduate Studies 5-2005 Aldol Reactions: E-Enolates and Anti-Selectivity Matthew Grant Anderson Utah State University Follow this and additional works at: https://digitalcommons.usu.edu/gradreports Part of the Organic Chemistry Commons Recommended Citation Anderson, Matthew Grant, "Aldol Reactions: E-Enolates and Anti-Selectivity" (2005). All Graduate Plan B and other Reports. 1312. https://digitalcommons.usu.edu/gradreports/1312 This Report is brought to you for free and open access by the Graduate Studies at DigitalCommons@USU. It has been accepted for inclusion in All Graduate Plan B and other Reports by an authorized administrator of DigitalCommons@USU. For more information, please contact [email protected]. ALDOL REACTIONS: E-ENOLATES AND ANTI-SELECTIVITY Prepared By: MATTHEW GRANT ANDERSON A non-thesis paper submitted in partial fulfillment of the requirement for a Plan B Degree of Masters of Science in Organic Chemistry UTAH STATE UNIVERSITY Logan, Utah 2005 Contents Page CONTENTS ...................................................................................... .i LIST OF TABLES, FIGURES AND SCHEMES ....................................... ii,iii ABSTRACT .................................................................................... iv CHAPTER I. ALDOL REACTIONS:E-ENOLATES AND ANTI SELECTIVITY ......... 1 CHAPTER II. SECTION 1. MODELS OF E-ENOLATE FORMATION ...... .... ....... ... 12 SECTION 2. PATERSON ENOLATE PAPER ..... ......................... -
Stereoselectivity in Atmospheric Autoxidation Kristian H
Subscriber access provided by Caltech Library Clusters, Radicals, and Ions; Environmental Chemistry Stereoselectivity in Atmospheric Autoxidation Kristian H. Møller, Eric Joseph Praske, Lu Xu, John D. Crounse, Paul O. Wennberg, and Henrik Grum Kjaergaard J. Phys. Chem. Lett., Just Accepted Manuscript • DOI: 10.1021/acs.jpclett.9b01972 • Publication Date (Web): 23 Sep 2019 Downloaded from pubs.acs.org on September 24, 2019 Just Accepted “Just Accepted” manuscripts have been peer-reviewed and accepted for publication. They are posted online prior to technical editing, formatting for publication and author proofing. The American Chemical Society provides “Just Accepted” as a service to the research community to expedite the dissemination of scientific material as soon as possible after acceptance. “Just Accepted” manuscripts appear in full in PDF format accompanied by an HTML abstract. “Just Accepted” manuscripts have been fully peer reviewed, but should not be considered the official version of record. They are citable by the Digital Object Identifier (DOI®). “Just Accepted” is an optional service offered to authors. Therefore, the “Just Accepted” Web site may not include all articles that will be published in the journal. After a manuscript is technically edited and formatted, it will be removed from the “Just Accepted” Web site and published as an ASAP article. Note that technical editing may introduce minor changes to the manuscript text and/or graphics which could affect content, and all legal disclaimers and ethical guidelines that apply to the journal pertain. ACS cannot be held responsible for errors or consequences arising from the use of information contained in these “Just Accepted” manuscripts. -
Electrochemistry and Photoredox Catalysis: a Comparative Evaluation in Organic Synthesis
molecules Review Electrochemistry and Photoredox Catalysis: A Comparative Evaluation in Organic Synthesis Rik H. Verschueren and Wim M. De Borggraeve * Department of Chemistry, Molecular Design and Synthesis, KU Leuven, Celestijnenlaan 200F, box 2404, 3001 Leuven, Belgium; [email protected] * Correspondence: [email protected]; Tel.: +32-16-32-7693 Received: 30 March 2019; Accepted: 23 May 2019; Published: 5 June 2019 Abstract: This review provides an overview of synthetic transformations that have been performed by both electro- and photoredox catalysis. Both toolboxes are evaluated and compared in their ability to enable said transformations. Analogies and distinctions are formulated to obtain a better understanding in both research areas. This knowledge can be used to conceptualize new methodological strategies for either of both approaches starting from the other. It was attempted to extract key components that can be used as guidelines to refine, complement and innovate these two disciplines of organic synthesis. Keywords: electrosynthesis; electrocatalysis; photocatalysis; photochemistry; electron transfer; redox catalysis; radical chemistry; organic synthesis; green chemistry 1. Introduction Both electrochemistry as well as photoredox catalysis have gone through a recent renaissance, bringing forth a whole range of both improved and new transformations previously thought impossible. In their growth, inspiration was found in older established radical chemistry, as well as from cross-pollination between the two toolboxes. In scientific discussion, photoredox catalysis and electrochemistry are often mentioned alongside each other. Nonetheless, no review has attempted a comparative evaluation of both fields in organic synthesis. Both research areas use electrons as reagents to generate open-shell radical intermediates. Because of the similar modes of action, many transformations have been translated from electrochemical to photoredox methodology and vice versa. -
Reactions of Alkenes and Alkynes
05 Reactions of Alkenes and Alkynes Polyethylene is the most widely used plastic, making up items such as packing foam, plastic bottles, and plastic utensils (top: © Jon Larson/iStockphoto; middle: GNL Media/Digital Vision/Getty Images, Inc.; bottom: © Lakhesis/iStockphoto). Inset: A model of ethylene. KEY QUESTIONS 5.1 What Are the Characteristic Reactions of Alkenes? 5.8 How Can Alkynes Be Reduced to Alkenes and 5.2 What Is a Reaction Mechanism? Alkanes? 5.3 What Are the Mechanisms of Electrophilic Additions HOW TO to Alkenes? 5.1 How to Draw Mechanisms 5.4 What Are Carbocation Rearrangements? 5.5 What Is Hydroboration–Oxidation of an Alkene? CHEMICAL CONNECTIONS 5.6 How Can an Alkene Be Reduced to an Alkane? 5A Catalytic Cracking and the Importance of Alkenes 5.7 How Can an Acetylide Anion Be Used to Create a New Carbon–Carbon Bond? IN THIS CHAPTER, we begin our systematic study of organic reactions and their mecha- nisms. Reaction mechanisms are step-by-step descriptions of how reactions proceed and are one of the most important unifying concepts in organic chemistry. We use the reactions of alkenes as the vehicle to introduce this concept. 129 130 CHAPTER 5 Reactions of Alkenes and Alkynes 5.1 What Are the Characteristic Reactions of Alkenes? The most characteristic reaction of alkenes is addition to the carbon–carbon double bond in such a way that the pi bond is broken and, in its place, sigma bonds are formed to two new atoms or groups of atoms. Several examples of reactions at the carbon–carbon double bond are shown in Table 5.1, along with the descriptive name(s) associated with each. -
Organic Chemistry-I (Nature of Bonding and Stereochemistry
Subject Chemistry Paper No and Title 1; Organic Chemistry-I (Nature of bonding and Stereochemistry Module No and 25; Regioselectivity Title Module Tag CHE_P1_M25 CHEMISTRY Paper No. 1: Organic Chemistry-I (Nature of bonding and Stereochemistry Module no. 25: Regioselectiveity TABLE OF CONTENTS 1. Learning Outcomes 2. Introduction 2.1 Different Examples of Regioselective Reactions 2.1.1 Regioselectivity in Addition Reactions 2.1.2 Addition of HBr to Alkenes 2.1.3 Hydroboration Reaction and Addition of Hydrogen and Bromine to Alkenes 2.1.4 Baeyer Villiger Oxidation 2.1.5 Birch Reduction 2.1.6 Electrophilic Aromatic Substitution 2.1.7 Diels Alder Reaction 2.1.8 Friedal Crafts Reaction 2.1.9 Regioselectivity of Elimination 2.2 How to Determine the Regioselectivity? 3. Summary CHEMISTRY Paper No. 1: Organic Chemistry-I (Nature of bonding and Stereochemistry Module no. 25: Regioselectiveity 1. Learning Outcomes After studying this module, you shall be able to Know what is regioselectivity. Understand the basic difference between regioselectivity and chemoselectivity. Identify the regioselectivity in various reactions. Calculate the regioselectivity for a particular reaction. 2. Introduction 2. What is Regioselectivity? Regioselectivity is known as the preference chemical bond breaking or making in one direction of over all other possible directions. It is certainly applicable to positions which many reagents affect during the course of the reaction. An example to consider is which proton a strong base will abstract from an organic molecule, or where on a substituted benzene ring a further substituent will add. If there occurs a preponderance over which regioisomer will be formed, then that reaction can be termed as regioselective. -
Regioselectivity in the [2 + 2] Cyclo-Addition Reaction of Triplet Carbonyl Compounds to Substituted Alkenes
J. Chem. Sci., Vol. 117, No. 5, September 2005, pp. 561–571. © Indian Academy of Sciences. Regioselectivity in the [2 + 2] cyclo-addition reaction of triplet carbonyl compounds to substituted alkenes (Paterno–Büchi reaction): A spin-polarized conceptual DFT approach B PINTÉR,1 F DE PROFT,2 T VESZPRÉMI1 and P GEERLINGS2,* 1Inorganic Chemistry Department, Budapest University of Technology and Economics (BUTE), Szent Gellért tér 4, H-1521, Budapest, Hungary 2Eenheid Algemene Chemie (ALGC), Vrije Universiteit Brussel (VUB), Faculteit, Wetenschappen, Pleinlaan 2, 1050 Brussels, Belgium e-mail: [email protected] Abstract. Regioselectivity of the photochemical [2 + 2] cyclo-addition of triplet carbonyl compounds with a series of ground state electron-rich and electron-poor alkenes, the Paterno–Büchi reaction, is studied. Activation barriers for the first step of the triplet reaction are computed in the case of the O-attack. Next, the observed regioselectivity is explained using a series of DFT-based reactivity indices. In the first step, we use the local softness and the local HSAB principle within a softness matching approach, and explain the relative activation barriers of the addition step. In the final step, the regioselectivity is assessed within the framework of spin-polarized conceptual density functional theory, considering response functions of the system’s external potential v, number of electrons N and spin number Ns, being the difference between the number of a and b electrons in the spin-polarized system. Although the concept of local spin philicity, in- troduced recently within this theory, appears less suited to predict the regioselectivity in this reaction, the correct regioselectivity emerges from considering an interaction between the largest values of the generalized Fukui functions fss on both interacting molecules. -
Elimination Reactions Are Described
Introduction In this module, different types of elimination reactions are described. From a practical standpoint, elimination reactions widely used for the generation of double and triple bonds in compounds from a saturated precursor molecule. The presence of a good leaving group is a prerequisite in most elimination reactions. Traditional classification of elimination reactions, in terms of the molecularity of the reaction is employed. How the changes in the nature of the substrate as well as reaction conditions affect the mechanism of elimination are subsequently discussed. The stereochemical requirements for elimination in a given substrate and its consequence in the product stereochemistry is emphasized. ELIMINATION REACTIONS Objective and Outline beta-eliminations E1, E2 and E1cB mechanisms Stereochemical considerations of these reactions Examples of E1, E2 and E1cB reactions Alpha eliminations and generation of carbene I. Basics Elimination reactions involve the loss of fragments or groups from a molecule to generate multiple bonds. A generalized equation is shown below for 1,2-elimination wherein the X and Y from two adjacent carbon atoms are removed, elimination C C C C -XY X Y Three major types of elimination reactions are: α-elimination: two atoms or groups are removed from the same atom. It is also known as 1,1-elimination. H R R C X C + HX R Both H and X are removed from carbon atom here R Carbene β-elimination: loss of atoms or groups on adjacent atoms. It is also H H known as 1,2- elimination. R C C R R HC CH R X H γ-elimination: loss of atoms or groups from the 1st and 3rd positions as shown below. -
Application of Enzymes in Regioselective and Stereoselective Organic Reactions
catalysts Review Application of Enzymes in Regioselective and Stereoselective Organic Reactions Ruipu Mu 1,*, Zhaoshuai Wang 2,3,* , Max C. Wamsley 1, Colbee N. Duke 1, Payton H. Lii 1, Sarah E. Epley 1, London C. Todd 1 and Patty J. Roberts 1 1 Department of Chemistry, Centenary College of Louisiana, Shreveport, LA 71104, USA; [email protected] (M.C.W.); [email protected] (C.N.D.); [email protected] (P.H.L.); [email protected] (S.E.E.); [email protected] (L.C.T.); [email protected] (P.J.R.) 2 Department of Pharmaceutical Science, College of Pharmacy, University of Kentucky, Lexington, KY 40536, USA 3 Center for Pharmaceutical Research and Innovation, College of Pharmacy, University of Kentucky, Lexington, KY 40536, USA * Correspondence: [email protected] (R.M.); [email protected] (Z.W.) Received: 22 June 2020; Accepted: 21 July 2020; Published: 24 July 2020 Abstract: Nowadays, biocatalysts have received much more attention in chemistry regarding their potential to enable high efficiency, high yield, and eco-friendly processes for a myriad of applications. Nature’s vast repository of catalysts has inspired synthetic chemists. Furthermore, the revolutionary technologies in bioengineering have provided the fast discovery and evolution of enzymes that empower chemical synthesis. This article attempts to deliver a comprehensive overview of the last two decades of investigation into enzymatic reactions and highlights the effective performance progress of bio-enzymes exploited in organic synthesis. Based on the types of enzymatic reactions and enzyme commission (E.C.) numbers, the enzymes discussed in the article are classified into oxidoreductases, transferases, hydrolases, and lyases. -
Chapter 8: Alkenes: Structure and Preparation Via Elimination Reactions
with cyanide anion affords a . N C: + H3C-H2C-H2C-H2C Br H3C-H2C-H2C-H2CC N + KBr K . with azide anion affords alkyl azides Br N3 + NaBr NN N + SN2 Na . with an thiols or thiolate ions affords a . – R–S + H3CH2C–Cl + H3CH2C– S–R + KCl S 2 + N Li 165 Chapter 8: Alkenes: Structure and Preparation via Elimination Reactions 8.1 Introduction to Elimination Reactions – Nucleophiles are Lewis bases. They can also promote elimination reactions of alkyl halides or sulfonates rather than substitution. SN2 – H3C-O Br OCH3 H H elimination + HOCH3 – H3C-O Br OH2 elimination + H O+ H 3 Br SN1 166 OH 83 8.2 Alkenes in Nature and in Industry (please read) 8.3 Nomenclature of Alkenes (please read and understand) Prefix-Parent-Suffix Suffix for alkenes: -ene Many of the same rules for alkanes apply to alkenes 1. Name the parent hydrocarbon by locating the longest carbon chain that contains the double bond and name it according to the number of carbons with the suffix -ene. H3C CH2 H C CH 3 2 C CH2 C CH 2 H C CH CH 3 2 2 H3C CH2 CH2 Parent = pentene not hexene (does not contain double bond) 2a. Number the carbons of the parent chain so the double bond carbons have the lowest possible numbers. Indicate the double bond by the number of the first alkene carbon. H3C CH2 CH2 CH CH CH3 123456 167 2-hexene 2b. If the double bond is equidistant from each end, number so the first substituent has the lowest number. -
Development of the Interrupted Nazarov Cyclization of Allenyl Vinyl Ketones, with Application to the Total Synthesis of the Cyclooctane Natural Product Roseadione
Development of the Interrupted Nazarov Cyclization of Allenyl Vinyl Ketones, with Application to the Total Synthesis of the Cyclooctane Natural Product Roseadione by Vanessa M. Marx Submitted in partial fulfilment of the requirements for the degree of Doctor of Philosophy at Dalhousie University Halifax, Nova Scotia May 2011 © Copyright by Vanessa M. Marx, 2011 DALHOUSIE UNIVERSITY DEPARTMENT OF CHEMISTRY The undersigned hereby certify that they have read and recommend to the Faculty of Graduate Studies for acceptance a thesis entitled “Development of the Interrupted Nazarov Cyclization of Allenyl Vinyl Ketones, with Application to the Total Synthesis of the Cyclooctane Natural Product Roseadione” by Vanessa M. Marx in partial fulfilment of the requirements for the degree of Doctor of Philosophy. Dated: May 19, 2011 Supervisor: _________________________________ Readers: _________________________________ _________________________________ _________________________________ Departmental Representative: _________________________________ ii DALHOUSIE UNIVERSITY DATE: May 19, 2011 AUTHOR: Vanessa M. Marx TITLE: Development of the Interrupted Nazarov Cyclization of Allenyl Vinyl Ketones, with Application to the Total Synthesis of the Cyclooctane Natural Product Roseadione DEPARTMENT OR SCHOOL: Department of Chemistry DEGREE: PhD CONVOCATION: October YEAR: 2011 Permission is herewith granted to Dalhousie University to circulate and to have copied for non-commercial purposes, at its discretion, the above title upon the request of individuals or institutions. I understand that my thesis will be electronically available to the public. The author reserves other publication rights, and neither the thesis nor extensive extracts from it may be printed or otherwise reproduced without the author’s written permission. The author attests that permission has been obtained for the use of any copyrighted material appearing in the thesis (other than the brief excerpts requiring only proper acknowledgement in scholarly writing), and that all such use is clearly acknowledged.