Phenotypic Plasticity of Wall Ultrastructure in the Green Alga Pediastrum S.L

Total Page:16

File Type:pdf, Size:1020Kb

Phenotypic Plasticity of Wall Ultrastructure in the Green Alga Pediastrum S.L Polish Botanical Journal 61(1): 73–88, 2016 DOI: 10.1515/pbj-2016-0005 PHENOTYPIC PLASTICITY OF WALL ULTRASTRUCTURE IN THE GREEN ALGA PEDIASTRUM S.L. (CHLOROPHYTA, SPHAEROPLEALES) Joanna Lenarczyk1 & Konrad Wołowski Abstract. This study examined wall ultrastructure variability in the microscopic green alga Pediastrum s.l. Its value as a diagnostic character is discussed. Field and cultured material of 21 taxa were compared using light and scanning electron microscopy. Nine ultrastructural elements occurring on the surface of Pediastrum are documented with LM and SEM micrographs. The highest number of taxa showed reticulate ornamentation composed of a trigonal mesh and granules situated on its corners. The paper considers the use of wall ultrastructure to reconcile traditional and modern taxonomical systems with regard to Pediastrum varieties, and addresses the phylogenetic relationships between strains representing different varieties. Key words: cell wall patterns, green algae, Pediastrum, scanning electron microscopy, taxonomy, ultrastructure Joanna Lenarczyk & Konrad Wołowski, Department of Phycology, W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, 31-512 Kraków, Poland; e-mail: [email protected] Introduction Pediastrum Meyen (Chlorophyceae, Sphaerople- types. That work examined 11 species from field, ales) is currently recognized as containing 46 taxa cultured and herbarium material, originating mainly belonging to 27 species (Buchheim et al. 2005; from Europe (e.g., Germany, France, Sweden) and Lenarczyk 2014). Although the genus itself is cos- also from other continents including Asia and mopolitan, only a few species such as Pediastrum North and South America. Parra concluded that boryanum (Turpin) Menegh. and P. duplex Meyen cell wall ornamentation is an important character occur worldwide (Komárek & Jankovská 2001). for distinguishing taxa on the infraspecific level. Other species such as P. privum (Printz) E. Hege- This opinion was supported by Wu (1987), who wald (Kowalska & Wołowski 2010a; Lang et al. revised taxa from Taiwan and documented them 2012) are less common. Taxa of the genus form with SEM micrographs. However, in a study of distinctive flat aggregations of cells (coenobia) granule density on the cell wall surface in cultured as a disc-like structure usually composed of 16, P. boryanum, Nielsen (2000) concluded that those 32 or 64 individual cells. Species and infraspe- structures alone cannot be used as characters for cific taxa are distinguished mainly by the shape diagnosing infraspecific taxa. Wall ultrastructure in of marginal cells, including their lobes and pro- Pediastrum has also been analyzed in taxonomic cesses, incisions between the lobes, and wall work by Couté and Tell (1979), Hegewald and surface ornamentation. The latter character usu- Yamagishi (1994), An et al. (1999), Hegewald ally requires observation by scanning electron and Jeon (2000), McManus and Lewis (2011) microscopy. and others. A broad study of wall structure in Pediastrum Wall ultrastructure has been treated in studies was published by Parra (1979), who introduced of the formation of the coenobium and cell wall terminology for ultrastructure and ornamentation (Gawlik & Millington 1969; Millington & Gawlik 1970; Marchant 1974; Millington et al. 1981), 1 Corresponding author and more recently in research on phylogenetic 74 POLISH BOTANICAL JOURNAL 61(1). 2016 relationships (Buchheim et al. 2005; McManus electron microscopy (SEM) with critical-point drying. & Lewis 2005, 2011; Jena et al. 2014). Additionally, material from six localities (asterisked in The aim of the present study was to determine Table 1) was kept alive for culturing. the variability of wall ultrastructure in Pediastrum Fourteen monoclonal cultures were started with single Pediastrum coenobia transferred with a Narishige taxa observed in field and cultured material from MM 188 micromanipulator into sterile liquid medium various waterbodies in Poland, and to consider (Table 2). The media used were Chu’s medium (Parra these findings in the context of a practical taxo- 1979), a mixture of Chu’s and Knop’s media (Starmach nomical identification system. 1963), and L-S2T2, for which a recipe was available at the website of the ACOI Coimbra Collection of Material and methods Algae [http://acoi.ci.uc.pt/]. The strains were cultured in a Bolarus G-18-2 phytotron at ca 22°C under fluo- Inland water samples containing Pediastrum were col- rescent tubes in the Phycological Laboratory of the W. lected in summer 2008 and 2009 from 48 water bodies Szafer Institute of Botany, Polish Academy of Sciences, in lowland and upland regions of Poland, and in summer Kraków. 2011 from Wyżni Czerwony Stawek lake in the Tatra Wall patterns were observed in preserved field mate- Mountains (Table 1). Additional water samples from rial (Table 1) and living isolates (Table 2) by both light Jezioro Warnowskie lake and Jezioro Zatorek lake used (LM) and scanning electron microscopy (SEM). LM to initiate some of the Pediastrum cultures were ob- studies employed Nikon OPTIPHOT-2, Jenaval (Carl tained in 2008 (Table 2). The samples were taken with Zeiss) and Nikon Eclipse 600 microscopes. For SEM a plankton net from 1 or 2 localities of each waterbody. the material was prepared and analyzed in two ways. The material from each locality was preserved with The material preserved with formaldehyde and the living 2–4% formaldehyde, except for three samples (3, 5, 8) isolates were first rinsed with distilled water, then placed collected in 2009 (Table 1), which were preserved with on cover glasses and air-dried at ca 35°C. The cover 1–2% glutaraldehyde in cacodylate buffer in order to glasses were affixed to aluminum stubs with double- apply the protocol for preparing samples for scanning sided carbon type. The material preserved with glutar- Similarity 0.0 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1.0 P. tetras P. duplex var. gracillimum P. duplex var. duplex 1 P. angulosum var. angulosum P. duplex var. asperum 5 P. boryanum var. forcipatum 3 P. boryanum var. pseudoglabrum P. kawraiskyi 4 2 P. biradiatum var. biradiatum P. orientale 6a P. alternans 6b P. boryanum var. boryanum P. boryanum var. brevicorne P. boryanum var. cornutum P. boryanum var. perforatum 7c P. cf. subgranulatum P. duplex var. rugulosum P. boryanum var. longicorne 7a P. integrum var. integrum P. simplex var. simplex 7c P. simplex var. echinulatum 7b Fig. 1. Similarities between wall patterns in Pediastrum, based on Jaccard’s coefficient and UPGMA clustering. For numbers of types of wall patterns see Table 4. Drawings after Lenarczyk (2014). J. LENARCZYK & K. WOŁOWSKI: PHENOTYPIC PLASTICITY OF PHENOTYPIC PLASTICITY WOŁOWSKI: K. & LENARCZYK J. Table 1. Characteristics of 49 waterbodies, together with the occurrence of 21 studied taxa in alphabetical order. Data on morphometry and trophy of all waterbodies cited from Lenarczyk (2014), except for no. 49 cited from Lenarczyk and Saługa (2013). Water samples from asterisked localities were maintained live for culturing. Pediastrum taxa Morpho metry of water Latitude (N)/ Date of angulosum biradiatum boryanum cornutum forcipatum longicorne perforatum pseudoglabrum Locality bodies: area Trophy brevicorne Longitude (E) sampling integrum simplex asperum duplex gracillimum (ha), maximum var. echinulatum var. rugulosum var. var. var. var. var. var. var. var. var. var. Waterbody no. Waterbody depth (m) var. var. var. var. var. var. var. var. subgranulatum cf. P. tetras P. P. kawraiskyi P. orientale P. simpex P. simplex P. P. alternans P. angulosum P. biradiatum P. boryanum P. boryanum P. boryanum P. boryanum P. boryanum P. boryanum P. boryanum P. duplex P. duplex P. duplex P. duplex P. integrum P. 1 Jezioro Jamno lake in Unieście 54°16′/16°06′ 2 240, 3.9 eutrophic 06.07.2008 + · · + + · + · + + · · · · · + · · · · · 2 Jezioro Bukowo lake in Dąbkowice 54°21′/16°15′ 1 750, 2.8 eutrophic 06.07.2008 · · · + · · · · · · · · · + · + + · · · + 3 Jezioro Gardno lake in Gardna 54°38′/17°10′ 2 470, 2.6 eutrophic 11.07.2008, + · · + · · + + + + · + · · · + + · · · · Wielka 12.08.2009 4 Jezioro Łebsko lake in Kluki 54°41′/17°21′ 7 140, 6.3 eutrophic 11.07.2008 + · · + · · + · · + · · · + · + + · · · + 5 Jezioro Sarbsko lake in Nowęcin 54°45′/17°35′ 650, 3.2 eutrophic 05.07.2008, + · · + · · + + + + · · · · · + · · · · + 12.08.2009 6 Pond in Golczewo 53°49′/14°58′ 2.13, – eutrophic 27.07.2009 · · · · · + · · · · + · · · · · · · · · · PEDIASTRUM 7 Pond ca 1 km NE of Święta 53°34′/14°38′ 25.0, 1.5 eutrophic 27.07.2009 · · · + · · + · · · · · · · · · · · · · + 8 Pond ca 1.5 km E of Święta 53°33′/14°39′ 11.9, 0.8 eutrophic 27.07.2009 · · · + · · + · · + · · + + · · + + + · + 9 Jezioro Bartoszewo lake near 53°31′/14°27′ 3.6, 2.5 eutrophic 28.07.2009 · · · + · · + · · · · · · · · · · · · · + Bartoszewo 10 Jezioro Dąbie lake in Czarna Łąka 53°27′/14°42′ 5 600, 8.0 eutrophic 28.07.2009 · · · + · · + + · · · · · · · · · · · · + S.L. 11 Jezioro Rusałka lake in Szczecin 53°27′/14°32′ 3.4, – eutrophic 29.07.2009 · · · · · · · · · · · + · · · · · · · · · 75 12 Jezioro Gałęziste lake near hiking 54°07′/23°04′ 3.9, 14 mesotrophic 01.07.2008 · · · · · · · · · · · · · · · · · · · · + trail 13 Jezioro Pietry lake (SW shore) 54°06′/23°05′ 228.2, 38 eutrophic 01.07.2008 · · · · · · · · + · · · · · · · · · · · · 14 Jezioro Czarne lake near Krzywe 54°05′/23°01′ 20.5, 8.8 mesotrophic 02.07.2008 · · · · · · · · + · · · · · · · · · · · · 15a Wigry lake / Zatoka Zadworze bay 54°05′/23°05′ 2 118.3, 73 eutrophic
Recommended publications
  • 50 Annual Meeting of the Phycological Society of America
    50th Annual Meeting of the Phycological Society of America August 10-13 Drexel University Philadelphia, PA The Phycological Society of America (PSA) was founded in 1946 to promote research and teaching in all fields of Phycology. The society publishes the Journal of Phycology and the Phycological Newsletter. Annual meetings are held, often jointly with other national or international societies of mutual member interest. PSA awards include the Bold Award for the best student paper at the annual meeting, the Lewin Award for the best student poster at the annual meeting, the Provasoli Award for outstanding papers published in the Journal of Phycology, The PSA Award of Excellence (given to an eminent phycologist to recognize career excellence) and the Prescott Award for the best Phycology book published within the previous two years. The society provides financial aid to graduate student members through Croasdale Fellowships for enrollment in phycology courses, Hoshaw Travel Awards for travel to the annual meeting and Grants-In-Aid for supporting research. To join PSA, contact the membership director or visit the website: www.psaalgae.org LOCAL ORGANIZERS FOR THE 2015 PSA ANNUAL MEETING: Rick McCourt, Academy of Natural Sciences of Drexel University Naomi Phillips, Arcadia University PROGRAM DIRECTOR FOR 2015: Dale Casamatta, University of North Florida PSA OFFICERS AND EXECUTIVE COMMITTEE President Rick Zechman, College of Natural Resources and Sciences, Humboldt State University Past President John W. Stiller, Department of Biology, East Carolina University Vice President/President Elect Paul W. Gabrielson, Hillsborough, NC International Vice President Juliet Brodie, Life Sciences Department, Genomics and Microbial Biodiversity Division, Natural History Museum, Cromwell Road, London Secretary Chris Lane, Department of Biological Sciences, University of Rhode Island, Treasurer Eric W.
    [Show full text]
  • El Fitoplancton De Un Canal De Xochimilco Y La Importancia De Estudiar Ecosistemas Acuáticos Urbanos Tip Revista Especializada En Ciencias Químico-Biológicas, Vol
    Tip Revista Especializada en Ciencias Químico-Biológicas ISSN: 1405-888X [email protected] Universidad Nacional Autónoma de México México López-Mendoza, Zitlali; Tavera, Rosaluz; Novelo, Eberto El fitoplancton de un canal de Xochimilco y la importancia de estudiar ecosistemas acuáticos urbanos Tip Revista Especializada en Ciencias Químico-Biológicas, vol. 18, núm. 1, 2015, pp. 13-28 Universidad Nacional Autónoma de México Distrito Federal, México Disponible en: http://www.redalyc.org/articulo.oa?id=43238076002 Cómo citar el artículo Número completo Sistema de Información Científica Más información del artículo Red de Revistas Científicas de América Latina, el Caribe, España y Portugal Página de la revista en redalyc.org Proyecto académico sin fines de lucro, desarrollado bajo la iniciativa de acceso abierto ARTÍCULO ORIGINAL D.R. © TIP Revista Especializada en Ciencias Químico-Biológicas, 18(1):13-28, 2015 EL FITOPLANCTON DE UN CANAL DE XOCHIMILCO Y LA IMPORTANCIA DE ESTUDIAR ECOSISTEMAS ACUÁTICOS URBANOS Zitlali López-Mendoza1, Rosaluz Tavera2* y Eberto Novelo3** 1Licenciatura en Biología, 2Departamento de Ecología y Recursos Naturales, 3Departamento de Biología Comparada, Facultad de Ciencias, Universidad Nacional Autónoma de México, Ciudad Universitaria, Deleg. Coyoacán, C.P. 04510, México, D.F. E-mails: *[email protected], **[email protected] RESUMEN El fitoplancton del canal El Bordo en Xochimilco se estudió durante la época de lluvias de 2008 y la época seca de 2009. El objetivo fue conocer la estabilidad de la flora de una zona que requiere medidas de remediación. Los resultados de este estudio mostraron una composición diversa del fitoplancton, en la que destacó el registro de varias especies no observadas previamente en México y concretamente en Xochimilco.
    [Show full text]
  • Evolutionary Relationships Between the Varieties of Green Algae Pediastrum Boryanum and P
    170 Fottea, Olomouc, 18(2): 170–188, 2018 DOI: 10.5507/fot.2018.004 Evolutionary relationships between the varieties of green algae Pediastrum boryanum and P. duplex s.l. (Chlorophyceae, Hydrodictyaceae) Joanna Lenarczyk* & Marta Saługa W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, 31–512 Kraków, Poland; *Corresponding author e–mail: [email protected] Abstract: The infraspecific relationships of the two most variable species,Pediastrum boryanum and P. duplex s.l. identified on the basis of morphological criteria, have been poorly studied so far. The present study focused on 12 original strains isolated from Polish water bodies and 29 strains from the GenBank database, which represent P. boryanum, P. duplex s.l. varieties and other morphologically similar taxa, against the background of 14 other strains of the family Hydrodictyaceae. In order to estimate the level of congruence between the phylogeny and the classical taxonomic system based on morphological criteria, the strains of P. boryanum and P. duplex s.l., and other morphologically similar taxa were subjected to parallel phylogenetic analyses applying Bayesian and Maximum Likelihood methods to combined molecular data (26S rDNA and rbcL cpDNA) and morphological analyses based on light and scanning electron microscopy, and iconographic documentation of almost all strains published elsewhere. The gene topologies revealed many discrepancies in the morphological features used to delimit the analysed taxa. The polyphyly of both P. boryanum and P. duplex s.l. was confirmed. Pseudopediastrum boryanum var. cornutum (formerly P. boryanum var. cornutum) formed a well supported monophyletic clade, whereas other varieties, including var. boryanum, brevicorne and longicorne, proved to be complex taxa.
    [Show full text]
  • Organellar Phylogenomics Inform Systematics in the Green Algal
    Digital Commons @ Assumption University Biological and Physical Sciences Department Faculty Works Biological and Physical Sciences Department 2018 Organellar Phylogenomics Inform Systematics in the Green Algal Family Hydrodictyaceae (Chlorophyceae) and Provide Clues to the Complex Evolutionary History of Plastid Genomes in the Green Algal Tree of Life Hilary A. McManus Le Moyne College Karolina Fučíková Assumption College, [email protected] Paul O. Lewis University of Connecticut Louise A. Lewis University of Connecticut Kenneth G. Karol New York Botanical Garden Follow this and additional works at: https://digitalcommons.assumption.edu/sciences-faculty Part of the Life Sciences Commons Recommended Citation McManus, H. A.; Fučíková, K.; Lewis, P. O. ; Lewis, L. A. ; and Karol, K. G. (2018). Organellar Phylogenomics Inform Systematics in the Green Algal Family Hydrodictyaceae (Chlorophyceae) and Provide Clues to the Complex Evolutionary History of Plastid Genomes in the Green Algal Tree of Life. American Journal of Botany 105(3): 315-329. https://doi.org/10.1002/ajb2.1066 This Article is brought to you for free and open access by the Biological and Physical Sciences Department at Digital Commons @ Assumption University. It has been accepted for inclusion in Biological and Physical Sciences Department Faculty Works by an authorized administrator of Digital Commons @ Assumption University. For more information, please contact [email protected]. RESEARCH ARTICLE INVITED SPECIAL ARTICLE For the Special Issue: Using and Navigating the Plant Tree of Life Organellar phylogenomics inform systematics in the green algal family Hydrodictyaceae (Chlorophyceae) and provide clues to the complex evolutionary history of plastid genomes in the green algal tree of life Hilary A.
    [Show full text]
  • Chlorophyceae) and Provide Clues to the Complex Evolutionary History of Plastid Genomes in the Green Algal Tree of Life
    RESEARCH ARTICLE INVITED SPECIAL ARTICLE For the Special Issue: Using and Navigating the Plant Tree of Life Organellar phylogenomics inform systematics in the green algal family Hydrodictyaceae (Chlorophyceae) and provide clues to the complex evolutionary history of plastid genomes in the green algal tree of life Hilary A. McManus1,5, Karolina Fučíková2, Paul O. Lewis3, Louise A. Lewis3, and Kenneth G. Karol4 Manuscript received 5 July 2017; revision accepted 19 December PREMISE OF THE STUDY: Phylogenomic analyses across the green algae are resolving 2017. relationships at the class, order, and family levels and highlighting dynamic patterns of 1 Department of Biological and Environmental Sciences, Le evolution in organellar genomes. Here we present a within- family phylogenomic study to Moyne College, 1419 Salt Springs Road, Syracuse, New York resolve genera and species relationships in the family Hydrodictyaceae (Chlorophyceae), for 13066, USA which poor resolution in previous phylogenetic studies, along with divergent morphological 2 Department of Natural Sciences, Assumption College, 500 Salisbury Street, Worcester, Massachusetts 01609, USA traits, have precluded taxonomic revisions. 3 Department of Ecology and Evolutionary Biology, University of METHODS: Complete plastome sequences and mitochondrial protein- coding gene sequences Connecticut, Storrs, Connecticut 06269, USA were acquired from representatives of the Hydrodictyaceae using next- generation 4 Lewis B. and Dorothy Cullman Program for Molecular sequencing methods. Plastomes were characterized, and gene order and content were Systematics, The New York Botanical Garden, 2900 Southern Boulevard, Bronx, New York 10458, USA compared with plastomes spanning the Sphaeropleales. Single- gene and concatenated- gene 5 Author for correspondence (e-mail: [email protected]) phylogenetic analyses of plastid and mitochondrial genes were performed.
    [Show full text]
  • Evolution and Unprecedented Variants of the Mitochondrial Genetic Code in a Lineage of Green Algae
    Smith ScholarWorks Biological Sciences: Faculty Publications Biological Sciences 10-1-2019 Evolution and Unprecedented Variants of the Mitochondrial Genetic Code in a Lineage of Green Algae David Zihala Ostravská Univerzita v Ostrave Marek Eliáš Ostravská Univerzita v Ostrave Laura A. Katz Smith College, [email protected] Follow this and additional works at: https://scholarworks.smith.edu/bio_facpubs Part of the Biology Commons Recommended Citation Zihala, David; Eliáš, Marek; and Katz, Laura A., "Evolution and Unprecedented Variants of the Mitochondrial Genetic Code in a Lineage of Green Algae" (2019). Biological Sciences: Faculty Publications, Smith College, Northampton, MA. https://scholarworks.smith.edu/bio_facpubs/85 This Article has been accepted for inclusion in Biological Sciences: Faculty Publications by an authorized administrator of Smith ScholarWorks. For more information, please contact [email protected] GBE Evolution and Unprecedented Variants of the Mitochondrial Genetic Code in a Lineage of Green Algae David Zihala 1,2 and Marek Elias1,2,* 1Department of Biology and Ecology, Faculty of Science, University of Ostrava, Czech Republic 2Institute of Environmental Technologies, Faculty of Science, University of Ostrava, Czech Republic *Corresponding author: E-mail: [email protected]. Accepted: July 17, 2019 Downloaded from https://academic.oup.com/gbe/article/11/10/2992/5588413 by guest on 09 April 2021 Abstract Mitochondria of diverse eukaryotes have evolved various departures from the standard genetic code, but the breadth
    [Show full text]
  • Sphaeropleales, Chlorophyceae) No Estado De São Paulo: Levantamento Florístico
    ANA MARGARITA LOAIZA RESTANO Família Hydrodictyaceae (Sphaeropleales, Chlorophyceae) no Estado de São Paulo: levantamento florístico Dissertação apresentada ao Instituto de Botânica da Secretaria do Meio Ambiente do Estado de São Paulo como parte dos requisitos exigidos para obtenção do título de Mestre em Biodiversidade Vegetal e Meio Ambiente, Área de Concentração Plantas Avasculares e Fungos em Análises Ambientais. São Paulo 2013 ANA MARGARITA LOAIZA RESTANO Família Hydrodictyaceae (Sphaeropleales, Chlorophyceae) no Estado de São Paulo: levantamento florístico Dissertação apresentada ao Instituto de Botânica da Secretaria do Meio Ambiente do Estado de São Paulo como parte dos requisitos exigidos para obtenção do título de Mestre em Biodiversidade Vegetal e Meio Ambiente, Área de Concentração Plantas Avasculares e Fungos em Análises Ambientais. ORIENTADOR: DR. CARLOS EDUARDO DE MATTOS BICUDO Ficha Catalográfica elaborada pelo NÚCLEO DE BIBLIOTECA E MEMÓRIA Loaiza Restano, Ana Margarita L795f Família Hydrodictyaceae (Sphaeropleales, Chlorophyceae) no Estado de São Paulo: levantamento florístico / Ana Margarita Loaiza Restano -- São Paulo, 2013. 164 p. il. Dissertação (Mestrado) -- Instituto de Botânica da Secretaria de Estado do Meio Ambiente, 2013. Bibliografia. 1. Algas. 2. Taxonomia. 3. Hydrodictyaceae. I. Título CDU: 582.26 iii "E é porque simplicidade e grandiosidade são ambas belas, que procuramos, de preferência, fatos simples e fatos grandiosos; que nos deleitamos tanto em seguir os cursos gigantes das estrelas, assim como com o escrutínio, no microscópio, das prodigiosas minúcias que também são uma grandiosidade; assim como na busca das idades geológicas dos traços do passado que nos atraem devido à sua lonjura". HENRI POINCARÉ (Traduzido de "Science et méthode") (1908) iv AGRADECIMENTOS ostaria de expressar minha gratidão e admiração a todas as pessoas que, de uma ou outra maneira e com seus incalculáveis conhecimentos, me ajudaram a esclarecer dúvidas e me proporcionaram a oportunidade de realizar esta G dissertação.
    [Show full text]
  • Strain Survey on Three Continents Confirms the Polyphyly of the Genus Pediastrum (Hydrodictyaceae, Chlorophyceae)
    Fottea, Olomouc, 14(1): 63–76, 2014 63 Strain survey on three continents confirms the polyphyly of the genus Pediastrum (Hydrodictyaceae, Chlorophyceae) Mrutyunjay JENA1,2,3, Christina BOCK1,4, Chhandashree BEHERA 1,2, Siba P. ADHIKARY5 & Lothar KRIENITZ1* 1Leibniz–Institute of Freshwater Ecology and Inland Fisheries, Alte Fischerhütte2, D–16775 Stechlin– Neuglobsow, Germany; *e–mail: krie@igb–berlin.de, tel.: 033082 69926, fax: 033082 69917 2 Department of Botany, Utkal University, Bhubaneswar–756014, Odisha, India 3Department of Botany, Berhampur University, Berhampur–760007, Odisha, India 4University of Essen, Faculty of Biology, D–45141 Essen, Germany 5Department of Biotechnology, Visva–Bharati Santiniketan–731235, West Bengal, India Abstract: Approximately 100 new strains of the Pediastrum–phenotype were isolated from inland waters of India, eastern and southwestern Africa, and Germany and were studied by light and scanning electron microscopy. The 18S rRNA and ITS genes of 28 strains were sequenced and compared with 25 sequences of Hydrodictyaceae from the GenBank database. Phylogenetic analyses confirmed the polyphyly of Pediastrum. The new species Sorastrum pediastriforme was described. This species resembled morphologically Pediastrum, however, the phylogenetic analyses revealed its affiliation within the genus Sorastrum. Furthermore, the following new combinations: Monactinus sturmii, Pseudopediastrum alternans, Pp. brevicorne, Pp. integrum, and Pp. pearsonii were established. Key words: CBC, ITS, Lacunastrum, Monactinus, morphology, Pediastrum, phylogeny, Pseudopediastrum, Sorastrum, SSU, Stauridium INTRODUCTION strains of Hydrodictyon, 29 strains of Pediastrum and three strains of Sorastrum revealed a pattern of The family Hydrodictyaceae (Chlorophyceae) is colony–form evolution within the family from two– from a morphological point of view, one of the most dimensionality to three–dimensionality (MCMANUS & diverse natural lineages of coccoid green algae and LEWIS 2005).
    [Show full text]
  • Maquetación 1
    ISSN 2469-0228 www.peapaleontologica.org.ar ANCIENT COASTAL ENVIRONMENTS IN A MAASTRICHTIAN–?PALEOCENE ATLANTIC SHORELINE: A PHYTOPLANKTON APPROACH C. MARCELA BOREL1,4 M. VERÓNICA GULER1,4 EDGARDO NAVARRO2,5 RICARDO ASTINI3,4 1Instituto Geológico del Sur (CONICET-Universidad Nacional del Sur), Departamento de Geología, Laboratorio de Palinología, San Juan 670, B8000ICN Bahía Blanca, Argentina. 2Departamento de Geología, Universidad Nacional del Sur, San Juan 670, B8000ICN Bahía Blanca, Argentina. 3Centro de Investigaciones en Ciencias de la Tierra (CONICET-Universidad Nacional de Córdoba), Laboratorio de Análisis de Cuencas, Av. Vélez Sarsfield 1611, X5016GCA Córdoba, Argentina. 4Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET). 5Comisión de Investigaciones Científicas de la Provincia de Buenos Aires (CIC). Recibido: 18 de mayo de 2016 - Aceptado: 7 de noviembre de 2016 Para citar este artículo: C. Marcela Borel, M. Verónica Guler, Edgardo Navarro, and Ricardo Astini (2016). Ancient coastal environments in a Maastrichtian–?Paleocene Atlantic shoreline: a phytoplankton approach. En: M. Martínez y D. Olivera (Eds.), Palinología del Meso-Cenozoico de Argentina - Volumen en homenaje a Mirta Elena Quattrocchio. Publicación Electrónica de la Asociación Paleontológica Argentina 16 (2): 76–87. Link a este artículo: http://dx.doi.org/10.5710/PEAPA.07.11.2016.117 DESPLAZARSE HACIA ABAJO PARA ACCEDER AL ARTÍCULO Asociación Paleontológica Argentina Maipú 645 1º piso, C1006ACG, Buenos Aires República Argentina Tel/Fax (54-11) 4326-7563
    [Show full text]
  • Pediastrum Sensu Lato (Chlorophyceae) of Central Mexico
    Cryptogamie, Algologie, 2016, 37 (4): 273-295 © 2016 Adac. Tous droits réservés Pediastrum sensu lato (Chlorophyceae) of central Mexico Gloria GARDUÑO-SOLÓRZANO a*,Diana L. GUILLÉN-RUIZ a, Martha MARTÍNEZ-GARCÍAb,Rafael E. QUINTANAR-ZUÑIGA b, Jorge E. CAMPOSb &Augusto A. COMAS-GONZÁLEZ c aFacultad de Estudios Superiores Iztacala, UNAM. Herbario IZTA. Avenida de los Barrios No. 1. Los Reyes Iztacala, Tlalnepantla, Estado de México. C.P.54090 bFacultad de Estudios Superiores Iztacala, UNAM. UBIPRO. Avenida de los Barrios No. 1. Los Reyes Iztacala, Tlalnepantla, Estado de México. C.P.54090 c CentrodeEstudios Ambientales, CITMA, Apdo. 202, 55100 Cienfuegos, Cuba Résumé – Cette étude fournit de nouvelles connaissances sur les préférences écologiques Pediastrum,plus c´est la première description détailléedes populations naturelles et des cultures au Mexique. Elle fournit des informations sur l’ultrastructure et les conditions environnementalesdePediastrum sensu lato dans en endroits dans le centre du pays. Ce genre (Hydrodictyaceae, Chlorophyceae) n’a pas une origine monophylétique plutôtaété divisé en cinq genres : Lacunastrum, Monactinus, Parapediastrum, Pseudopediastrum et Stauridium.Les spécimens étudiésont été recueillies entre Octobre 2009 et Novembre 2013. Les microscopes optique et électronique ont révélé la présence de sept espèces. Parmi celles- ci, Monactinus simplex, Pediastrum duplex, Pseudopediastrum boryanum et Stauridium tetras ont une distribution dans le monde entier.Aulieu de cela, Monactinus simplex var. echinulatum, M. simplex var. sturmii et Pediastrum simplex var. clathratum ont été enregistrées comme des taxa rares. La distribution des espèces en examinant la littérature de 1841-2015 asignalé l’existence de 23 taxa dans 17 états du Mexique, où les états de Mexique, Veracruz et Michoacan avec plusieurs espèces.
    [Show full text]
  • (And Tertiary) Structure of the ITS2 and Its Application for Phylogenetic Tree Reconstructions and Species Identification
    Secondary (and tertiary) structure of the ITS2 and its application for phylogenetic tree reconstructions and species identification vorgelegt von Dipl. Biol. Alexander Keller Würzburg, 2010 Kumulative Dissertation zur Erlangung des naturwissenschaftlichen Doktorgrades (Dr. rer. nat.) der Bayerischen Julius-Maximilians-Universität Würzburg Einreichung: in Würzburg Mitglieder der Promotionskommission: Vorsitzender: Prof. Thomas Dandekar 1. Gutachter: Prof. Thomas Dandekar 2. Gutachter: Prof. Ingolf Steffan-Dewenter Promotionskolloquium: in Würzburg Aushändigung Doktorurkunde: in Würzburg iii TABLE OF CONTENTS Acknowledgements........................................ vii Summary..............................................viii Zusammenfassung ........................................ ix I General Introduction1 II Materials and Methods9 1 Materials 11 2 Bioinformatic tools 13 2.1 Annotation Tool....................................... 13 3 Bioinformatic approaches 15 3.1 HMM-Annotation...................................... 15 3.2 Secondary Structure Prediction.............................. 15 3.3 Tertiary Structure Prediction............................... 16 4 Phylogenetic procedures 17 4.1 Alignments.......................................... 17 4.2 Substitution model selection................................ 17 4.3 Tree reconstructions.................................... 18 4.4 CBC analyses........................................ 18 4.5 Tree viewers......................................... 18 5 Simulations 21 5.1 Simulations........................................
    [Show full text]
  • Phylogenetic Patterns of Gene Rearrangements in Four Mitochondrial Genomes from the Green Algal Family Hydrodictyaceae (Sphaeropleales, Chlorophyceae) Audrey A
    Farwagi et al. BMC Genomics (2015) 16:826 DOI 10.1186/s12864-015-2056-5 RESEARCH ARTICLE Open Access Phylogenetic patterns of gene rearrangements in four mitochondrial genomes from the green algal family Hydrodictyaceae (Sphaeropleales, Chlorophyceae) Audrey A. Farwagi1, Karolina Fučíková2 and Hilary A. McManus1* Abstract Background: The variability in gene organization and architecture of green algal mitochondrial genomes is only recently being studied on a finer taxonomic scale. Sequenced mt genomes from the chlorophycean orders Volvocales and Sphaeropleales exhibit considerable variation in size, content, and structure, even among closely related genera. However, sampling of mt genomes on a within-family scale is still poor and the sparsity of information precludes a thorough understanding of genome evolution in the green algae. Methods: Genomic DNA of representative taxa were sequenced on an Illumina HiSeq2500 to produce 2x100 bp paired reads, and mitochondrial genomes were assembled and annotated using Geneious v.6.1.5. Phylogenetic analysis of 13 protein-coding mitochondrial genes spanning the Sphaeropleales was performed. Results: This study presents one of the first within-family comparisons of mt genome diversity, and is the first to report complete mt genomes for the family Hydrodictyaceae (order Sphaeropleales). Four complete mt genomes representing three taxa and four phylogenetic groups, Stauridium tetras, Pseudopediastrum boryanum, and Pediastrum duplex, range in size from 37,723 to 53,560 bp. The size variability is primarily due to intergenic region expansion, and intron content is generally low compared with other mt genomes of Sphaeropleales. Conclusions: Certain gene rearrangements appear to follow a phylogenetic pattern, and with a more thorough taxon sampling genome-level sequence may be useful in resolving systematic conundrums that plague this morphologically diverse family.
    [Show full text]