Archaea;Crenarchaeota;Marine;Other

Total Page:16

File Type:pdf, Size:1020Kb

Archaea;Crenarchaeota;Marine;Other Archaea;Crenarchaeota;Marine;Other;Other;Other Archaea;Crenarchaeota;Miscellaneous;Other;Other;Other Archaea;Crenarchaeota;Soil;Other;Other;Other Archaea;Crenarchaeota;South;Other;Other;Other Archaea;Crenarchaeota;terrestrial;Other;Other;Other Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Miscellaneous;Other Archaea;Euryarchaeota;Methanobacteria;Methanobacteriales;Methanobacteriaceae;Methanobacterium Archaea;Euryarchaeota;Methanomicrobia;Methanocellales;Methanocellaceae;Rice Archaea;Euryarchaeota;Methanomicrobia;Methanosarcinales;Methanosarcinaceae;Methanosarcina Archaea;Euryarchaeota;Thermoplasmata;Thermoplasmatales;Marine;Other Bacteria;Acidobacteria;Acidobacteria;11-24;uncultured;Other Bacteria;Acidobacteria;Acidobacteria;Acidobacteriales;Acidobacteriaceae;Acidobacterium Bacteria;Acidobacteria;Acidobacteria;Acidobacteriales;Acidobacteriaceae;Candidatus Bacteria;Acidobacteria;Acidobacteria;Acidobacteriales;Acidobacteriaceae;uncultured Bacteria;Acidobacteria;Acidobacteria;BPC102;uncultured;Other Bacteria;Acidobacteria;Acidobacteria;Bryobacter;uncultured;Other Bacteria;Acidobacteria;Acidobacteria;Candidatus;Other;Other Bacteria;Acidobacteria;Acidobacteria;DA023;uncultured;Other Bacteria;Acidobacteria;Acidobacteria;DA023;unidentified;Other Bacteria;Acidobacteria;Acidobacteria;DS-100;uncultured;Other Bacteria;Acidobacteria;Acidobacteria;PAUC26f;uncultured;Other Bacteria;Acidobacteria;Acidobacteria;RB41;uncultured;Other Bacteria;Acidobacteria;Holophagae;32-20;uncultured;Other Bacteria;Acidobacteria;Holophagae;43F-1404R;uncultured;Other Bacteria;Acidobacteria;Holophagae;Holophagales;Holophagaceae;uncultured Bacteria;Acidobacteria;Holophagae;NS72;uncultured;Other Bacteria;Acidobacteria;Holophagae;SJA-36;uncultured;Other Bacteria;Acidobacteria;Holophagae;Sva0725;uncultured;Other Bacteria;Acidobacteria;Holophagae;iii1-8;uncultured;Other Bacteria;Acidobacteria;RB25;uncultured;Other;Other Bacteria;Actinobacteria;Actinobacteria;Actinobacteridae;Actinomycetales;Frankineae Bacteria;Actinobacteria;Actinobacteria;Actinobacteridae;Actinomycetales;Micrococcineae Bacteria;Actinobacteria;Actinobacteria;Actinobacteridae;Actinomycetales;Propionibacterineae Bacteria;Actinobacteria;Actinobacteria;Actinobacteridae;Actinomycetales;Pseudonocardineae Bacteria;Actinobacteria;Actinobacteria;MB-A2-108;uncultured;Other Bacteria;Actinobacteria;Actinobacteria;Rubrobacteridae;AKIW543;uncultured Bacteria;Actinobacteria;Actinobacteria;Rubrobacteridae;Solirubrobacterales;Elev-16S-1332 Bacteria;Actinobacteria;Actinobacteria;Rubrobacteridae;Solirubrobacterales;FFCH13075 Bacteria;Bacteroidetes;Flavobacteria;Flavobacteriales;Cryomorphaceae;Fluviicola Bacteria;Bacteroidetes;Flavobacteria;Flavobacteriales;Flavobacteriaceae;Flavobacterium Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;AKYH767;uncultured Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;Chitinophagaceae;Chitinophaga Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;Chitinophagaceae;Ferruginibacter Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;Chitinophagaceae;Flavisolibacter Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;Chitinophagaceae;Niastella Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;Chitinophagaceae;Terrimonas Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;Chitinophagaceae;uncultured Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;Cytophagaceae;Adhaeribacter Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;Cytophagaceae;Flexibacter Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;Cytophagaceae;Siphonobacter Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;NS11-12;Other Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;PHOS-HE51;uncultured Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;Saprospiraceae;uncultured Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;Sphingobacteriaceae;Mucilaginibacter Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;Sphingobacteriaceae;Pedobacter Bacteria;Bacteroidetes;Sphingobacteria;Sphingobacteriales;env.OPS;Other Bacteria;Candidate;Other;Other;Other;Other Bacteria;Chlorobi;Chlorobia;Chlorobiales;OPB56;uncultured Bacteria;Chlorobi;Chlorobia;Chlorobiales;SJA-28;uncultured Bacteria;Chloroflexi;Anaerolineae;Anaerolineales;Anaerolineaceae;uncultured Bacteria;Chloroflexi;Chloroflexi;Chloroflexales;Chloroflexaceae;Roseiflexus Bacteria;Chloroflexi;Thermomicrobia;JG30-KF-CM45;uncultured;Other Bacteria;Cyanobacteria;Chloroplast;Auxenochlorella;Other;Other Bacteria;Cyanobacteria;Chloroplast;Vitis;Other;Other Bacteria;Cyanobacteria;Chloroplast;uncultured;Other;Other Bacteria;Cyanobacteria;MLE1-12;uncultured;Other;Other Bacteria;Elusimicrobia;Elusimicrobia;Lineage;Other;Other Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus Bacteria;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus Bacteria;Firmicutes;Erysipelotrichi;Erysipelotrichales;Erysipelotrichaceae;Asteroleplasma Bacteria;Gemmatimonadetes;Gemmatimonadetes;AT425-EubC11;Other;Other Bacteria;Gemmatimonadetes;Gemmatimonadetes;BD2-11;Other;Other Bacteria;Gemmatimonadetes;Gemmatimonadetes;Gemmatimonadales;Gemmatimonadaceae;Gemmatimonas Bacteria;Gemmatimonadetes;Gemmatimonadetes;Gemmatimonadales;Gemmatimonadaceae;uncultured Bacteria;JL-ETNP-Z39;uncultured;Other;Other;Other Bacteria;Nitrospirae;Nitrospira;Nitrospirales;0319-6A21;uncultured Bacteria;Nitrospirae;Nitrospira;Nitrospirales;4-29;uncultured Bacteria;Nitrospirae;Nitrospira;Nitrospirales;Nitrospiraceae;Nitrospira Bacteria;Planctomycetes;BD7-11;uncultured;Other;Other Bacteria;Planctomycetes;OM190;uncultured;Other;Other Bacteria;Planctomycetes;Phycisphaerae;WD2101;Other;Other Bacteria;Planctomycetes;Planctomycetacia;Planctomycetales;Planctomycetaceae;Blastopirellula Bacteria;Planctomycetes;Planctomycetacia;Planctomycetales;Planctomycetaceae;Gemmata Bacteria;Planctomycetes;Planctomycetacia;Planctomycetales;Planctomycetaceae;Isosphaera Bacteria;Planctomycetes;Planctomycetacia;Planctomycetales;Planctomycetaceae;Pir4 Bacteria;Planctomycetes;Planctomycetacia;Planctomycetales;Planctomycetaceae;Pirellula Bacteria;Planctomycetes;Planctomycetacia;Planctomycetales;Planctomycetaceae;Planctomyces Bacteria;Planctomycetes;Planctomycetacia;Planctomycetales;Planctomycetaceae;Singulisphaera Bacteria;Planctomycetes;Planctomycetacia;Planctomycetales;Planctomycetaceae;Zavarzinella Bacteria;Planctomycetes;Planctomycetacia;Planctomycetales;Planctomycetaceae;uncultured Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bradyrhizobiaceae;Bradyrhizobium Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;DUNssu371;uncultured Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Hyphomicrobiaceae;Devosia Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Methylocystaceae;uncultured Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Nordella;uncultured Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Nordella;unidentified Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Xanthobacteraceae;uncultured Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Roseomonas Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;uncultured Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;DA111;uncultured Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;I-10;uncultured Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;MND8;uncultured Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;MNH4;uncultured Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;wr0007;alpha Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;wr0007;metagenome Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;wr0007;uncultured Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Novosphingobium Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Pandoraea Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Aquabacterium Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Azohydromonas Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Comamonas Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Hydrogenophaga Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Hylemonella Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Inhella Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Paucibacter Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Piscinibacter Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Polaromonas Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Pseudorhodoferax Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Ramlibacter Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Rhizobacter Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Simplicispira Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Variovorax Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;uncultured Bacteria;Proteobacteria;Betaproteobacteria;Nitrosomonadales;Nitrosomonadaceae;uncultured Bacteria;Proteobacteria;Betaproteobacteria;SC-I-84;uncultured;Other Bacteria;Proteobacteria;Betaproteobacteria;TRA3-20;uncultured;Other Bacteria;Proteobacteria;Deltaproteobacteria;Desulfobacterales;Nitrospinaceae;Candidatus Bacteria;Proteobacteria;Deltaproteobacteria;Desulfobacterales;Nitrospinaceae;uncultured
Recommended publications
  • Contribution of the Calcifying Green Alga Phacotus Lenticularis to Lake Carbonate Sequestration
    Technische Universität München Wissenschaftszentrum Weihenstephan für Ernährung, Landnutzung und Umwelt Lehrstuhl für Aquatische Systembiologie Contribution of the calcifying green alga Phacotus lenticularis to lake carbonate sequestration Sebastian Lenz Vollständiger Abdruck der von der Fakultät Wissenschaftszentrum Weihenstephan für Ernährung, Landnutzung und Umwelt der Technischen Universität München zur Erlangung des akademischen Grades eines Doktors der Naturwissenschaften genehmigten Dissertation. Vorsitzender: Prof. Dr. Johannes Kollmann Prüfer der Dissertation: 1. Prof. Dr. Jürgen Geist 2. apl. Prof. Dr. Tanja Gschlößl Die Dissertation wurde am 21.01.2020 bei der Technischen Universität München eingereicht und durch die Fakultät Wissenschaftszentrum Weihenstephan für Ernährung, Landnutzung und Umwelt am 23.04.2020 angenommen. So remember to look up at the stars and not down at your feet. Try to make sense of what you see and wonder about what makes the universe exist. Be curious. And however difficult life may seem, there is always something you can do and succeed at. It matters that you don’t just give up. Professor Stephen Hawking (y 14 March 2018) Contents Preface 10 1 Introduction 12 1.1 Carbon cycling and carbonate-water system in alkaline lakes . 12 1.2 Biogenic calcite precipitation . 14 1.3 Calcifying phytoplankton Phacotus lenticularis . 15 1.4 Objectives . 18 1.5 Materials and Methods . 19 1.5.1 Study sites and monitoring concept . 19 1.5.2 Sampling for representative monitoring . 21 1.5.3 Carbonate measurements . 23 1.5.4 Sediment core analysis . 28 2 Calcite production by the calcifying green alga Phacotus lenticularis 31 2.1 Abstract . 31 2.2 Author contributions . 32 2.3 Introduction .
    [Show full text]
  • Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016
    Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016 April 1981 Revised, May 1982 2nd revision, April 1983 3rd revision, December 1999 4th revision, May 2011 Prepared for U.S. Department of Commerce Ohio Department of Natural Resources National Oceanic and Atmospheric Administration Division of Wildlife Office of Ocean and Coastal Resource Management 2045 Morse Road, Bldg. G Estuarine Reserves Division Columbus, Ohio 1305 East West Highway 43229-6693 Silver Spring, MD 20910 This management plan has been developed in accordance with NOAA regulations, including all provisions for public involvement. It is consistent with the congressional intent of Section 315 of the Coastal Zone Management Act of 1972, as amended, and the provisions of the Ohio Coastal Management Program. OWC NERR Management Plan, 2011 - 2016 Acknowledgements This management plan was prepared by the staff and Advisory Council of the Old Woman Creek National Estuarine Research Reserve (OWC NERR), in collaboration with the Ohio Department of Natural Resources-Division of Wildlife. Participants in the planning process included: Manager, Frank Lopez; Research Coordinator, Dr. David Klarer; Coastal Training Program Coordinator, Heather Elmer; Education Coordinator, Ann Keefe; Education Specialist Phoebe Van Zoest; and Office Assistant, Gloria Pasterak. Other Reserve staff including Dick Boyer and Marje Bernhardt contributed their expertise to numerous planning meetings. The Reserve is grateful for the input and recommendations provided by members of the Old Woman Creek NERR Advisory Council. The Reserve is appreciative of the review, guidance, and council of Division of Wildlife Executive Administrator Dave Scott and the mapping expertise of Keith Lott and the late Steve Barry.
    [Show full text]
  • Protistology Review of Diversity and Taxonomy of Cercomonads
    Protistology 3 (4), 201217 (2004) Protistology Review of diversity and taxonomy of cercomonads Alexander P. Myl’nikov 1 and Serguei A. Karpov 2 1 Institute for the Biology of Inland Waters, Borok, Yaroslavl district, Russia 2 Biological Faculty, Herzen Pedagogical State University, St. Petersburg, Russia Summary Cercomonads are very common heterotrophic flagellates in water and soil. Phylogenetically they are a key group of a protistan phylum Cercozoa. Morphological and taxonomical analysis of cercomonads reveals that the order Cercomonadida (Vickerman) Mylnikov, 1986 includes two families: Cercomonadidae Kent, 1880 (=Cercobodonidae Hollande, 1942) and Heteromitidae Kent, 1880 em. Mylnikov, 2000 (=Bodomorphidae Hollande, 1952), which differ in several characters: body shape, temporary/habitual pseudopodia, presence/absence of plasmodia stage and microtubular cone, type of extrusomes. The family Cercomonadidae includes Cercomonas Dujardin, 1841 and Helkesimastix Woodcock et Lapage, 1914. All species of Cercobodo are transferred to the genus Cercomonas. The family Heteromitidae includes Heteromita Dujardin, 1841 emend. Mylnikov et Karpov, Protaspis Skuja, 1939, Allantion Sandon, 1924, Sainouron Sandon, 1924, Cholamonas Flavin et al., 2000 and Katabia Karpov et al., 2003. The names Bodomorpha and Sciviamonas are regarded as junior synonyms of Heteromita. The genus Proleptomonas Woodcock, 1916 according to its morphology is not a cercomonad, and is not included in the order. The genus Massisteria Larsen and Patterson, 1988 is excluded from
    [Show full text]
  • Plant Life Magill’S Encyclopedia of Science
    MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE Volume 4 Sustainable Forestry–Zygomycetes Indexes Editor Bryan D. Ness, Ph.D. Pacific Union College, Department of Biology Project Editor Christina J. Moose Salem Press, Inc. Pasadena, California Hackensack, New Jersey Editor in Chief: Dawn P. Dawson Managing Editor: Christina J. Moose Photograph Editor: Philip Bader Manuscript Editor: Elizabeth Ferry Slocum Production Editor: Joyce I. Buchea Assistant Editor: Andrea E. Miller Page Design and Graphics: James Hutson Research Supervisor: Jeffry Jensen Layout: William Zimmerman Acquisitions Editor: Mark Rehn Illustrator: Kimberly L. Dawson Kurnizki Copyright © 2003, by Salem Press, Inc. All rights in this book are reserved. No part of this work may be used or reproduced in any manner what- soever or transmitted in any form or by any means, electronic or mechanical, including photocopy,recording, or any information storage and retrieval system, without written permission from the copyright owner except in the case of brief quotations embodied in critical articles and reviews. For information address the publisher, Salem Press, Inc., P.O. Box 50062, Pasadena, California 91115. Some of the updated and revised essays in this work originally appeared in Magill’s Survey of Science: Life Science (1991), Magill’s Survey of Science: Life Science, Supplement (1998), Natural Resources (1998), Encyclopedia of Genetics (1999), Encyclopedia of Environmental Issues (2000), World Geography (2001), and Earth Science (2001). ∞ The paper used in these volumes conforms to the American National Standard for Permanence of Paper for Printed Library Materials, Z39.48-1992 (R1997). Library of Congress Cataloging-in-Publication Data Magill’s encyclopedia of science : plant life / edited by Bryan D.
    [Show full text]
  • Molecular and Phylogenetic Analysis Reveals New Diversity of Dunaliella
    Journal of the Marine Molecular and phylogenetic analysis reveals Biological Association of the United Kingdom new diversity of Dunaliella salina from hypersaline environments cambridge.org/mbi Andrea Highfield1 , Angela Ward1, Richard Pipe1 and Declan C. Schroeder1,2,3 1The Marine Biological Association of the United Kingdom, The Laboratory, Citadel Hill, Plymouth PL1 2PB, UK; Original Article 2School of Biological Sciences, University of Reading, Reading RG6 6LA, UK and 3Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St Paul, MN 55108, USA Cite this article: Highfield A, Ward A, Pipe R, Schroeder DC (2021). Molecular and Abstract phylogenetic analysis reveals new diversity of Dunaliella salina from hypersaline Twelve hyper-β carotene-producing strains of algae assigned to the genus Dunaliella salina environments. Journal of the Marine Biological have been isolated from various hypersaline environments in Israel, South Africa, Namibia Association of the United Kingdom 101,27–37. and Spain. Intron-sizing of the SSU rDNA and phylogenetic analysis of these isolates were https://doi.org/10.1017/S0025315420001319 undertaken using four commonly employed markers for genotyping, LSU rDNA, ITS, rbcL Received: 9 June 2020 and tufA and their application to the study of Dunaliella evaluated. Novel isolates have Revised: 21 December 2020 been identified and phylogenetic analyses have shown the need for clarification on the tax- Accepted: 21 December 2020 onomy of Dunaliella salina. We propose the division of D. salina into four sub-clades as First published online: 22 January 2021 defined by a robust phylogeny based on the concatenation of four genes. This study further Key words: demonstrates the considerable genetic diversity within D.
    [Show full text]
  • The Revised Classification of Eukaryotes
    See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/231610049 The Revised Classification of Eukaryotes Article in Journal of Eukaryotic Microbiology · September 2012 DOI: 10.1111/j.1550-7408.2012.00644.x · Source: PubMed CITATIONS READS 961 2,825 25 authors, including: Sina M Adl Alastair Simpson University of Saskatchewan Dalhousie University 118 PUBLICATIONS 8,522 CITATIONS 264 PUBLICATIONS 10,739 CITATIONS SEE PROFILE SEE PROFILE Christopher E Lane David Bass University of Rhode Island Natural History Museum, London 82 PUBLICATIONS 6,233 CITATIONS 464 PUBLICATIONS 7,765 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Biodiversity and ecology of soil taste amoeba View project Predator control of diversity View project All content following this page was uploaded by Smirnov Alexey on 25 October 2017. The user has requested enhancement of the downloaded file. The Journal of Published by the International Society of Eukaryotic Microbiology Protistologists J. Eukaryot. Microbiol., 59(5), 2012 pp. 429–493 © 2012 The Author(s) Journal of Eukaryotic Microbiology © 2012 International Society of Protistologists DOI: 10.1111/j.1550-7408.2012.00644.x The Revised Classification of Eukaryotes SINA M. ADL,a,b ALASTAIR G. B. SIMPSON,b CHRISTOPHER E. LANE,c JULIUS LUKESˇ,d DAVID BASS,e SAMUEL S. BOWSER,f MATTHEW W. BROWN,g FABIEN BURKI,h MICAH DUNTHORN,i VLADIMIR HAMPL,j AARON HEISS,b MONA HOPPENRATH,k ENRIQUE LARA,l LINE LE GALL,m DENIS H. LYNN,n,1 HILARY MCMANUS,o EDWARD A. D.
    [Show full text]
  • Hidden Diversity of Plankton in the Soda Lake Nakuru, Kenya, During A
    Hydrobiologia (2013) 702:95–103 DOI 10.1007/s10750-012-1310-y PRIMARY RESEARCH PAPER Hidden diversity of eukaryotic plankton in the soda lake Nakuru, Kenya, during a phase of low salinity revealed by a SSU rRNA gene clone library Wei Luo • Kiplagat Kotut • Lothar Krienitz Received: 12 July 2012 / Revised: 28 August 2012 / Accepted: 31 August 2012 / Published online: 16 September 2012 Ó Springer Science+Business Media B.V. 2012 Abstract A SSU rRNA gene clone library was Our findings reveal a hidden diversity, which would constructed to establish the diversity of eukaryotic not have been detected by traditional observations. plankton in the African soda lake Nakuru during a phase of low salinity (9.7 ppt = hyposaline). Nor- Keywords Chlorophyta Á Clone library Á Lake mally, the lake is mesosaline (up to 50 ppt) and its Nakuru Á Lesser Flamingo Á Phytoflagellates Á phytoplankton is dominated by few species of cyano- Soda lakes Á SSU rRNA bacteria, in particular Arthrospira fusiformis, which is the main food resource of Lesser Flamingos. Our study recovered a unique phytoplankton species composi- Introduction tion characterized by a high diversity of monadoid and coccoid green algae. Out of 77 clones detected, 52 The phytoplankton of saline-alkaline lakes in the Great belonged to Chlorophyta. Many of the chlorophytes African Rift Valley usually is dominated by cyano- were transported from the catchment area into the lake bacteria, mainly Arthrospira fusiformis (Voronichin) through small seasonal rivers and an outflow of the Koma´rek et Lund (often erroneously identified as Nakuru town sewage treatment plant. Other phyloge- ‘‘Spirulina platensis’’), which forms the food base for netic groups detected were Fungi, Cryptophyta, hundreds of thousands of Lesser Flamingos (Phoenic- Jakobida, Alveolata, Stramenopiles, and Metazoa.
    [Show full text]
  • A Functional Approach to Resolving the Biogeocomplexity of Two Extreme Environments Haydn Rubelmann III University of South Florida, [email protected]
    University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School 11-12-2014 A Functional Approach to Resolving the Biogeocomplexity of Two Extreme Environments Haydn Rubelmann III University of South Florida, [email protected] Follow this and additional works at: https://scholarcommons.usf.edu/etd Part of the Marine Biology Commons, and the Microbiology Commons Scholar Commons Citation Rubelmann, Haydn III, "A Functional Approach to Resolving the Biogeocomplexity of Two Extreme Environments" (2014). Graduate Theses and Dissertations. https://scholarcommons.usf.edu/etd/5432 This Dissertation is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. A Functional Approach to Resolving the Biogeocomplexity of Two Extreme Environments by Haydn Rubelmann III A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy Department of Cell Biology, Microbiology and Molecular Biology College of Arts and Sciences University of South Florida Major Professor: James R. Garey, Ph.D. Randy Larsen, Ph.D. Kathleen Scott, Ph.D. David Merkler, Ph.D. Date of Approval: November 12, 2014 Keywords: environmental microbiology, extremophiles, shallow-water hydrothermal vents, anoxic marine pits Copyright © 2014, Haydn Rubelmann III DEDICATION I would like to dedicate this dissertation to three of my personal champions: my grandfather, Haydn Rubelmann Sr. (1929 - 2004), who encouraged me to pursue an academic career; my stepfather, Dale Jones (1954 - 2008), who was the best father anyone could ever hope for, and my husband, Eduardo Godoy, who suffered through not only 8 years of my doctoral tenure, but a grueling civil liberty injustice that almost wedged the Caribbean Sea between us.
    [Show full text]
  • 2004 University of Connecticut Storrs, CT
    Welcome Note and Information from the Co-Conveners We hope you will enjoy the NEAS 2004 meeting at the scenic Avery Point Campus of the University of Connecticut in Groton, CT. The last time that we assembled at The University of Connecticut was during the formative years of NEAS (12th Northeast Algal Symposium in 1973). Both NEAS and The University have come along way. These meetings will offer oral and poster presentations by students and faculty on a wide variety of phycological topics, as well as student poster and paper awards. We extend a warm welcome to all of our student members. The Executive Committee of NEAS has extended dormitory lodging at Project Oceanology gratis to all student members of the Society. We believe this shows NEAS members’ pride in and our commitment to our student members. This year we will be honoring Professor Arthur C. Mathieson as the Honorary Chair of the 43rd Northeast Algal Symposium. Art arrived with his wife, Myla, at the University of New Hampshire in 1965 from California. Art is a Professor of Botany and a Faculty in Residence at the Jackson Estuarine Laboratory of the University of New Hampshire. He received his Bachelor of Science and Master’s Degrees at the University of California, Los Angeles. In 1965 he received his doctoral degree from the University of British Columbia, Vancouver, Canada. Over a 43-year career Art has supervised many undergraduate and graduate students studying the ecology, systematics and mariculture of benthic marine algae. He has been an aquanaut-scientist for the Tektite II and also for the FLARE submersible programs.
    [Show full text]
  • Marteilia Refringens and Marteilia Pararefringens Sp
    Parasitology Marteilia refringens and Marteilia pararefringens sp. nov. are distinct parasites cambridge.org/par of bivalves and have different European distributions Research Article 1,2 1,2,3 1 4 5 Cite this article: Kerr R et al (2018). Marteilia R. Kerr , G. M. Ward , G. D. Stentiford , A. Alfjorden , S. Mortensen , refringens and Marteilia pararefringens sp. nov. J. P. Bignell1,S.W.Feist1, A. Villalba6,7, M. J. Carballal6, A. Cao6, I. Arzul8, are distinct parasites of bivalves and have different European distributions. Parasitology D. Ryder1 and D. Bass1,3 145, 1483–1492. https://doi.org/10.1017/ S003118201800063X 1Pathology and Microbial Systematics Theme, Centre for Environment, Fisheries and Aquaculture Science (Cefas), Weymouth Laboratory, Weymouth, Dorset DT4 8UB, UK; 2Biosciences, College of Life and Environmental Sciences, Received: 19 July 2017 3 Revised: 16 January 2018 Stocker Road, University of Exeter, Exeter EX4 4QD, UK; Department of Life Sciences, The Natural History 4 Accepted: 8 February 2018 Museum, Cromwell Road, SW7 5BD, London, UK; Division of fish, Department of animal health and antimicrobial First published online: 11 June 2018 strategies, National Veterinary Institute (SVA), Sweden; 5Institute of Marine Research, PO. Box 1870, Nordnes, 5817 Bergen, Norway; 6Centro de Investigacións Mariñas, Consellería do Mar da Xunta de Galicia, 36620 Vilanova de Key words: Arousa, Spain; 7Department of Life Sciences, University of Alcalá, 28871 Alcalá de Henares, Spain and 8Institut Marteilia refringens; Marteilia pararefringens; Français de Recherche pour l’Exploitation de la Mer (Ifremer), Laboratoire de Génétique et Pathologie des ITS1 rDNA; IGS rDNA; Paramyxida; Mollusques Marins, Avenue de Mus de Loup, 17390 La Tremblade, France Ascetosporea; Mytilus edulis; Ostrea edulis Author for correspondence: Abstract Grant D.
    [Show full text]
  • Marteilia Refringens and Marteilia Pararefringens Sp
    Parasitology Marteilia refringens and Marteilia pararefringens sp. nov. are distinct parasites cambridge.org/par of bivalves and have different European distributions Research Article 1,2 1,2,3 1 4 5 Cite this article: Kerr R et al (2018). Marteilia R. Kerr , G. M. Ward , G. D. Stentiford , A. Alfjorden , S. Mortensen , refringens and Marteilia pararefringens sp. nov. J. P. Bignell1,S.W.Feist1, A. Villalba6,7, M. J. Carballal6, A. Cao6, I. Arzul8, are distinct parasites of bivalves and have different European distributions. Parasitology D. Ryder1 and D. Bass1,3 145, 1483–1492. https://doi.org/10.1017/ S003118201800063X 1Pathology and Microbial Systematics Theme, Centre for Environment, Fisheries and Aquaculture Science (Cefas), Weymouth Laboratory, Weymouth, Dorset DT4 8UB, UK; 2Biosciences, College of Life and Environmental Sciences, Received: 19 July 2017 3 Revised: 16 January 2018 Stocker Road, University of Exeter, Exeter EX4 4QD, UK; Department of Life Sciences, The Natural History 4 Accepted: 8 February 2018 Museum, Cromwell Road, SW7 5BD, London, UK; Division of fish, Department of animal health and antimicrobial First published online: 11 June 2018 strategies, National Veterinary Institute (SVA), Sweden; 5Institute of Marine Research, PO. Box 1870, Nordnes, 5817 Bergen, Norway; 6Centro de Investigacións Mariñas, Consellería do Mar da Xunta de Galicia, 36620 Vilanova de Key words: Arousa, Spain; 7Department of Life Sciences, University of Alcalá, 28871 Alcalá de Henares, Spain and 8Institut Marteilia refringens; Marteilia pararefringens; Français de Recherche pour l’Exploitation de la Mer (Ifremer), Laboratoire de Génétique et Pathologie des ITS1 rDNA; IGS rDNA; Paramyxida; Mollusques Marins, Avenue de Mus de Loup, 17390 La Tremblade, France Ascetosporea; Mytilus edulis; Ostrea edulis Author for correspondence: Abstract Grant D.
    [Show full text]
  • Imgim21 [Ug Cl11 [Mg C/M?I [Ug Cl11 [Mg C/M21 [Ug Cl11 Img C/M21 [Ug Cill Img Clm21 Median 54,L 7,7 1,5 02 32 0,5 3,O 0,4 46,4 6,6
    .. Lebensräume polare On the ecology of racteristics, se other aquatic habi Marina Car Ber. Polarforsch. Meeresforsch. 40 ISSN 1618 - 3193 Marina Carstens c/o Institut füPolarökologi der UniversitäKiel Wischhofstraß 1-3, Geb. 12 D-24148 Kiel Germany E-mail: [email protected] Diese Arbeit ist die leicht verändert Fassung einer Dissertation, die der Mathematisch-Naturwissenschaftlichen Fakultäder Christian-Albrechts- UniversitäKiel im Juni 2001 vorgelegt wurde. Inhaltsverzeichnis Inhaltsverzeichnis Zusammenfassung Summary Einleitung Lebensräum im Ökosyste Meereis Ökologi der Meereistümpe- Erkenntnisse anderer Autoren Ziel der Untersuchungen Terminologie Untersuchungsgebiet Hydrographie Eisbedeckung Eisverhältnissin den Untersuchungsjahren 1993 und 1994 Material und Methoden Untersuchungsmaterial Meereistümpe Vergleichsstationen: Landtümpeund -Seen, Tümpeauf Gletschern und Eisbergen, Proben aus dem marinen Milieu 3.1.2.1 Schmelzwassertümpeauf Gletschern und Eisbergen 3.1.2.2Landtümpe und -Seen 3.1.2.3Proben aus dem marinen Milieu Untersuchungsmethoden Probennahme und in situ-Messungen (Tem eratur, pH-Wert, Leitfähigkeit Sauerstoffkonzentration, PAR, Dimensionen) Bestimmung der Nährstoffkonzentratione Bestimmung der Salinitä Bestimmung der Chlorophyll a-Konzentrationen Bestimmung der Konzentration des partikuläre organischen Materials (CIN-Analyse) Fixierung und Probenaufbereitung füdie mikroskopische Auswertung Quantitative mikroskopische Auswertung Mikroskopische Analyse, Identifizierung und systematische
    [Show full text]