RESEARCH ARTICLE Biodiversity of Trichoderma Community in the Tidal Flats and Wetland of Southeastern China Kandasamy Saravanakumar1,2,3, Chuanjin Yu1,2,3, Kai Dou1,2,3, Meng Wang1,2,3, Yaqian Li1,2,3*, Jie Chen1,2,3 1 School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, P.R. China, 2 State Key Laboratory of Microbial Metabolism, Shanghai Jiao Tong University, Shanghai, P.R. China, 3 Key Laboratory of Urban Agriculture (South), Ministry of Agriculture, Shanghai, P.R. China *
[email protected] a11111 Abstract To investigate the biodiversity of Trichoderma (Hypocreaceae) and their relation to sediment physical and chemical properties, we collected a total of 491 sediment samples from coastal wetlands (tidal flat and wetland) in Southeast China. Further, we applied two types of molecu- OPEN ACCESS lar approaches such as culture dependent and independent methods for identification of Tri- choderma spp. A total of 254 isolates were obtained and identified to 13 species such as T. Citation: Saravanakumar K, Yu C, Dou K, Wang M, Li Y, Chen J (2016) Biodiversity of Trichoderma aureoviride, T. asperellum, T. harzianum, T. atroviride, T. koningiopsis, T. longibrachiatum, T. Community in the Tidal Flats and Wetland of koningii. T. tawa, T. viridescens, T. virens, T. hamatum, T. viride, and T. velutinum by the cul- Southeastern China. PLoS ONE 11(12): e0168020. ture-dependent (CD) method of these, T. tawa was newly described in China. Subsequently, doi:10.1371/journal.pone.0168020 the culture indepented method of 454 pyrosequencing analysis revealed a total of six species Editor: Vijai Gupta, National University of IrelandÐ such as T.