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Parasites & Vectors BioMed Central Research Open Access Composition and structure of the parasite faunas of cod, Gadus morhua L. (Teleostei: Gadidae), in the North East Atlantic Diana Perdiguero-Alonso1, Francisco E Montero2, Juan Antonio Raga1 and Aneta Kostadinova*1,3 Address: 1Marine Zoology Unit, Cavanilles Institute of Biodiversity and Evolutionary Biology, University of Valencia, PO Box 22085, 46071, Valencia, Spain, 2Department of Animal Biology, Plant Biology and Ecology, Autonomous University of Barcelona, Campus Universitari, 08193, Bellaterra, Barcelona, Spain and 3Central Laboratory of General Ecology, Bulgarian Academy of Sciences, 2 Gagarin Street, 1113, Sofia, Bulgaria Email: Diana Perdiguero-Alonso - [email protected]; Francisco E Montero - [email protected]; Juan Antonio Raga - [email protected]; Aneta Kostadinova* - [email protected] * Corresponding author Published: 18 July 2008 Received: 4 June 2008 Accepted: 18 July 2008 Parasites & Vectors 2008, 1:23 doi:10.1186/1756-3305-1-23 This article is available from: http://www.parasitesandvectors.com/content/1/1/23 © 2008 Perdiguero-Alonso et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Abstract Background: Although numerous studies on parasites of the Atlantic cod, Gadus morhua L. have been conducted in the North Atlantic, comparative analyses on local cod parasite faunas are virtually lacking. The present study is based on examination of large samples of cod from six geographical areas of the North East Atlantic which yielded abundant baseline data on parasite distribution and abundance. -
Distribution and Relative Abundance of Demersal Fishes from Beam Trawl
CENTRE FOR ENVIRONMENT, FISHERIES AND AQUACULTURE SCI ENCE SCIENCE SERIES TECHNICAL REPORT Number 124 Distribution and relative abundance of demersal fi shes from beam trawl surveys in the eastern English Channel (ICES division VIId) and the southern North Sea (ICES division IVc) 1993-2001 M. Parker-Humphreys LOWESTOFT 2005 1 This report should be cited as: Parker-Humphreys, M. (2005). Distribution and relative abundance of demersal fishes from beam trawl surveys in eastern English Channel (ICES division VIId) and the southern North Sea (ICES division IVc) 1993-2001. Sci. Ser. Tech Rep., CEFAS Lowestoft, 124: 92pp. © Crown copyright, 2005 This publication (excluding the logos) may be re-used free of charge in any format or medium for research for non-commercial purposes, private study or for internal circulation within an organisation. This is subject to it being re-used accurately and not used in a misleading context. The material must be acknowledged as Crown copyright and the title of the publication specified. This publication is also available at www.cefas.co.uk For any other use of this material please apply for a Click-Use Licence for core material at www.hmso.gov.uk/ copyright/licences/core/core_licence.htm, or by writing to: HMSO’s Licensing Division St Clements House 2-16 Colegate Norwich NR3 1BQ Fax: 01603 723000 E-mail: [email protected] 2 CONTENTS ........................................................................................Page 1. Eastern English Channel Fisheries ............................................................................................. -
Updated Checklist of Marine Fishes (Chordata: Craniata) from Portugal and the Proposed Extension of the Portuguese Continental Shelf
European Journal of Taxonomy 73: 1-73 ISSN 2118-9773 http://dx.doi.org/10.5852/ejt.2014.73 www.europeanjournaloftaxonomy.eu 2014 · Carneiro M. et al. This work is licensed under a Creative Commons Attribution 3.0 License. Monograph urn:lsid:zoobank.org:pub:9A5F217D-8E7B-448A-9CAB-2CCC9CC6F857 Updated checklist of marine fishes (Chordata: Craniata) from Portugal and the proposed extension of the Portuguese continental shelf Miguel CARNEIRO1,5, Rogélia MARTINS2,6, Monica LANDI*,3,7 & Filipe O. COSTA4,8 1,2 DIV-RP (Modelling and Management Fishery Resources Division), Instituto Português do Mar e da Atmosfera, Av. Brasilia 1449-006 Lisboa, Portugal. E-mail: [email protected], [email protected] 3,4 CBMA (Centre of Molecular and Environmental Biology), Department of Biology, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal. E-mail: [email protected], [email protected] * corresponding author: [email protected] 5 urn:lsid:zoobank.org:author:90A98A50-327E-4648-9DCE-75709C7A2472 6 urn:lsid:zoobank.org:author:1EB6DE00-9E91-407C-B7C4-34F31F29FD88 7 urn:lsid:zoobank.org:author:6D3AC760-77F2-4CFA-B5C7-665CB07F4CEB 8 urn:lsid:zoobank.org:author:48E53CF3-71C8-403C-BECD-10B20B3C15B4 Abstract. The study of the Portuguese marine ichthyofauna has a long historical tradition, rooted back in the 18th Century. Here we present an annotated checklist of the marine fishes from Portuguese waters, including the area encompassed by the proposed extension of the Portuguese continental shelf and the Economic Exclusive Zone (EEZ). The list is based on historical literature records and taxon occurrence data obtained from natural history collections, together with new revisions and occurrences. -
Marine Fishes of the Azores: an Annotated Checklist and Bibliography
MARINE FISHES OF THE AZORES: AN ANNOTATED CHECKLIST AND BIBLIOGRAPHY. RICARDO SERRÃO SANTOS, FILIPE MORA PORTEIRO & JOÃO PEDRO BARREIROS SANTOS, RICARDO SERRÃO, FILIPE MORA PORTEIRO & JOÃO PEDRO BARREIROS 1997. Marine fishes of the Azores: An annotated checklist and bibliography. Arquipélago. Life and Marine Sciences Supplement 1: xxiii + 242pp. Ponta Delgada. ISSN 0873-4704. ISBN 972-9340-92-7. A list of the marine fishes of the Azores is presented. The list is based on a review of the literature combined with an examination of selected specimens available from collections of Azorean fishes deposited in museums, including the collection of fish at the Department of Oceanography and Fisheries of the University of the Azores (Horta). Personal information collected over several years is also incorporated. The geographic area considered is the Economic Exclusive Zone of the Azores. The list is organised in Classes, Orders and Families according to Nelson (1994). The scientific names are, for the most part, those used in Fishes of the North-eastern Atlantic and the Mediterranean (FNAM) (Whitehead et al. 1989), and they are organised in alphabetical order within the families. Clofnam numbers (see Hureau & Monod 1979) are included for reference. Information is given if the species is not cited for the Azores in FNAM. Whenever available, vernacular names are presented, both in Portuguese (Azorean names) and in English. Synonyms, misspellings and misidentifications found in the literature in reference to the occurrence of species in the Azores are also quoted. The 460 species listed, belong to 142 families; 12 species are cited for the first time for the Azores. -
Evolutionary History of the Genus Trisopterus Q ⇑ Elena G
Molecular Phylogenetics and Evolution 62 (2012) 1013–1018 Contents lists available at SciVerse ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Short Communication Evolutionary history of the genus Trisopterus q ⇑ Elena G. Gonzalez a, , Regina L. Cunha b, Rafael G. Sevilla a,1, Hamid R. Ghanavi a,1, Grigorios Krey c,1, ⇑ José M. Bautista a, ,1 a Departmento de Bioquímica y Biología Molecular IV, Universidad Complutense de Madrid (UCM), Facultad de Veterinaria, Av. Puerta de Hierro s/n, 28040 Madrid, Spain b CCMAR, Campus de Gambelas, Universidade do Algarve, 8005-139 Faro, Portugal c National Agricultural Research Foundation, Fisheries Research Institute, Nea Peramos, Kavala, GR 64007, Greece article info abstract Article history: The group of small poor cods and pouts from the genus Trisopterus, belonging to the Gadidae family, com- Received 26 October 2011 prises four described benthopelagic species that occur across the North-eastern Atlantic, from the Baltic Accepted 30 November 2011 Sea to the coast of Morocco, and the Mediterranean. Here, we combined molecular data from mitochon- Available online 8 December 2011 drial (cytochrome b) and nuclear (rhodopsin) genes to confirm the taxonomic status of the described spe- cies and to disentangle the evolutionary history of the genus. Our analyses supported the monophyly of Keywords: the genus Trisopterus and confirmed the recently described species Trisopterus capelanus. A relaxed Gadidae molecular clock analysis estimated an Oligocene origin for the group (30 million years ago; mya) indi- Trisopterus cating this genus as one of the most ancestral within the Gadidae family. The closure and re-opening of Cytochrome b Rhodopsin the Strait of Gibraltar after the Messinian Salinity Crisis (MSC) probably triggered the speciation process Historical demography that resulted in the recently described T. -
Trisopterus Luscus (Linnaeus, 1758)
Trisopterus luscus (Linnaeus, 1758) AphiaID: 126445 FANECA Animalia (Reino) > Chordata (Filo) > Vertebrata (Subfilo) > Gnathostomata (Infrafilo) > Pisces (Superclasse) > Pisces (Superclasse-2) > Actinopteri (Classe) > Teleostei (Subclasse) > Gadiformes (Ordem) > Gadidae (Familia) © Vasco Ferreira © Vasco Ferreira © Vasco Ferreira © Vasco Ferreira 1 © Mike Weber © Mike Weber © Vasco Ferreira © Vasco Ferreira - OMARE / Jul. 11 2018 © Vasco Ferreira © Vasco Ferreira 2 © Vasco Ferreira © Vasco Ferreira © Vasco Ferreira © Vasco Ferreira © Vasco Ferreira Descrição Corpo relativamente elevado, altura do corpo maior que o comprimento da cabeça; três barbatanas dorsais contíguas; as duas barbatanas anais estão unidas por uma curta membrana, a base da primeira anal é mais longa que a distância pré-anal, situando-se a sua origem ao nível da primeira dorsal ou ligeiramente atrás; barbilho mentoniano de comprimento quase igual ao diâmetro ocular; uma mancha negra na base das peitorais. Cor acobreada com 3 ou 4 bandas pálidas verticais. O comprimento varia entre 20-30 cm; 3 Distribuição geográfica Atlântico Nordeste, desde a Noruega a Marrocos. Habitat e ecologia Espécie bentopelágica, os juvenis encontram-se na zona costeira, enquanto os adultos vivem em águas mais profundas (entre 20 e 300m). Prefere substratos mistos de rocha e areia. Características identificativas Altura do corpo maior que o comprimento da cabeça; Três barbatanas dorsais contı́guas; Duas barbatanas anais unidas por uma curta membrana, a base da primeira anal é mais longa que a distância -
Fish Identification Tools for Biodiversity and Fisheries Assessments
FAO ISSN 2070-7010 FISHERIES AND AQUACULTURE TECHNICAL PAPER 585 Fish identification tools for biodiversity and fisheries assessments Review and guidance for decision-makers Cover illustration: Mosaic by Johanne Fischer FAO FISHERIES AND AQUACULTURE TECHNICAL Fish identification tools for PAPER biodiversity and fisheries 585 assessments Review and guidance for decision-makers Edited by Johanne Fischer Senior Fishery Resources Officer Marine and Inland Fishery Resources Branch FAO Fisheries and Aquaculture Department Rome, Italy FOOD AND AGRICULTURE ORGANIZATION OF THE UNITED NATIONS Rome, 2013 The designations employed and the presentation of material in this information product do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations (FAO) concerning the legal or development status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. The mention of specific companies or products of manufacturers, whether or not these have been patented, does not imply that these have been endorsed or recommended by FAO in preference to others of a similar nature that are not mentioned. The views expressed in this information product are those of the author(s) and do not necessarily reflect the views or policies of FAO. ISBN 978-92-5-107771-9 (print) E-ISBN 978-92-5-107772-6 (PDF) © FAO 2013 FAO encourages the use, reproduction and dissemination of material in this information product. Except where otherwise indicated, material may be copied, downloaded and printed for private study, research and teaching purposes, or for use in non-commercial products or services, provided that appropriate acknowledgement of FAO as the source and copyright holder is given and that FAO’s endorsement of users’ views, products or services is not implied in any way. -
Length–Weight Relationships of 216 North Sea Benthic Invertebrates
Journal o f the Marine Biological Association o f the United 2010, Kingdom, 90(1), 95-104. © Marine Biological Association of the United Kingdom, 2010 doi:io.ioi7/Soo25 315409991408 Length-weight relationships of 216 North Sea benthic invertebrates and fish L.A. ROBINSON1, S.P.R. GREENSTREET2, H. REISS3, R. CALLAWAY4, J. CRAEYMEERSCH5, I. DE BOOIS5, S. DEGRAER6, S. EHRICH7, H.M. FRASER2, A. GOFFIN6, I. KRÖNCKE3, L. LINDAL JORGENSON8, M.R. ROBERTSON2 AND J. LANCASTER4 School of Biological Sciences, Ecosystem Dynamics Group, University of Liverpool, Liverpool, L69 7ZB, UK, fish eries Research Services, Marine Laboratory, PO Box 101, Aberdeen, AB11 9DB, UK, 3Senckenberg Institute, Department of Marine Science, Südstrand 40,26382 Wilhelmshaven, Germany, 4University of Wales, Swansea, Singleton Park, Swansea, SA2 8PP, UK, Netherlands Institute for Fisheries Research (IMARES), PO Box 77, 4400 AB Yerseke, The Netherlands, sGhent University, Department of Biology, Marine Biology Section, K.L. Ledeganckstraat 35, B 9000, Gent, Belgium, 7Federal Research Institute for Rural Areas, Forestry and Fisheries, Institute of Sea Fisheries, Palmaille 9, 22767 Hamburg, Germany, institute of Marine Research, Box 1870, 5817 Bergen, Norway Size-based analyses of marine animals are increasingly used to improve understanding of community structure and function. However, the resources required to record individual body weights for benthic animals, where the number of individuals can reach several thousand in a square metre, are often prohibitive. Here we present morphometric (length-weight) relationships for 216 benthic species from the North Sea to permit weight estimation from length measurements. These relationships were calculated using data collected over two years from 283 stations. -
Mediterranean Sea
OVERVIEW OF THE CONSERVATION STATUS OF THE MARINE FISHES OF THE MEDITERRANEAN SEA Compiled by Dania Abdul Malak, Suzanne R. Livingstone, David Pollard, Beth A. Polidoro, Annabelle Cuttelod, Michel Bariche, Murat Bilecenoglu, Kent E. Carpenter, Bruce B. Collette, Patrice Francour, Menachem Goren, Mohamed Hichem Kara, Enric Massutí, Costas Papaconstantinou and Leonardo Tunesi MEDITERRANEAN The IUCN Red List of Threatened Species™ – Regional Assessment OVERVIEW OF THE CONSERVATION STATUS OF THE MARINE FISHES OF THE MEDITERRANEAN SEA Compiled by Dania Abdul Malak, Suzanne R. Livingstone, David Pollard, Beth A. Polidoro, Annabelle Cuttelod, Michel Bariche, Murat Bilecenoglu, Kent E. Carpenter, Bruce B. Collette, Patrice Francour, Menachem Goren, Mohamed Hichem Kara, Enric Massutí, Costas Papaconstantinou and Leonardo Tunesi The IUCN Red List of Threatened Species™ – Regional Assessment Compilers: Dania Abdul Malak Mediterranean Species Programme, IUCN Centre for Mediterranean Cooperation, calle Marie Curie 22, 29590 Campanillas (Parque Tecnológico de Andalucía), Málaga, Spain Suzanne R. Livingstone Global Marine Species Assessment, Marine Biodiversity Unit, IUCN Species Programme, c/o Conservation International, Arlington, VA 22202, USA David Pollard Applied Marine Conservation Ecology, 7/86 Darling Street, Balmain East, New South Wales 2041, Australia; Research Associate, Department of Ichthyology, Australian Museum, Sydney, Australia Beth A. Polidoro Global Marine Species Assessment, Marine Biodiversity Unit, IUCN Species Programme, Old Dominion University, Norfolk, VA 23529, USA Annabelle Cuttelod Red List Unit, IUCN Species Programme, 219c Huntingdon Road, Cambridge CB3 0DL,UK Michel Bariche Biology Departement, American University of Beirut, Beirut, Lebanon Murat Bilecenoglu Department of Biology, Faculty of Arts and Sciences, Adnan Menderes University, 09010 Aydin, Turkey Kent E. Carpenter Global Marine Species Assessment, Marine Biodiversity Unit, IUCN Species Programme, Old Dominion University, Norfolk, VA 23529, USA Bruce B. -
Fishery Science: the Unique Contributions of Early Life Stages
Fishery Science: The Unique Contributions of Early Life Stages Lee A. Fuiman Robert G. Werner Blackwell Science 00 03/05/2002 08:37 Page i Fishery Science 00 03/05/2002 08:37 Page ii We dedicate this book to our good friend John Blaxter, the gentleman scientist. His scientific excellence and creativity as well as his personal charm and good humor have made permanent impressions on both of us. John’s scientific contributions permeate this book, which we hope will carry his legacy to many future generations of fishery scientists. 00 03/05/2002 08:37 Page iii Fishery Science The Unique Contributions of Early Life Stages Edited by Lee A. Fuiman Department of Marine Science, University of Texas at Austin, Marine Science Institute, Port Aransas, Texas, USA and Robert G. Werner College of Environmental Science and Forestry, State University of New York, Syracuse, New York, USA 00 03/05/2002 08:37 Page iv © 2002 by Blackwell Science Ltd, First published 2002 by Blackwell Science Ltd a Blackwell Publishing Company Editorial Offices: Library of Congress Osney Mead, Oxford OX2 0EL, UK Cataloging-in-Publication Data Tel: +44 (0)1865 206206 is available Blackwell Science, Inc., 350 Main Street, Malden, MA 02148-5018, USA ISBN 0-632-05661-4 Tel: +1 781 388 8250 Iowa State Press, a Blackwell Publishing A catalogue record for this title is available from Company, 2121 State Avenue, Ames, Iowa the British Library 50014-8300, USA Tel: +1 515 292 0140 Set in Times by Gray Publishing, Tunbridge Blackwell Science Asia Pty, 54 University Street, Wells, Kent Carlton, Victoria 3053, Australia Printed and bound in Great Britain by Tel: +61 (0)3 9347 0300 MPG Books, Bodmin, Cornwall Blackwell Wissenschafts Verlag, Kurfürstendamm 57, 10707 Berlin, Germany Tel: +49 (0)30 32 79 060 For further information on Blackwell Science, visit our website: The right of the Author to be identified as the www.blackwell-science.com Author of this Work has been asserted in accordance with the Copyright, Designs and Patents Act 1988. -
A Trophic Latitudinal Gradient Revealed in Anchovy and Sardine
www.nature.com/scientificreports OPEN A trophic latitudinal gradient revealed in anchovy and sardine from the Western Mediterranean Sea using a multi‑proxy approach Eneko Bachiller1,6*, Marta Albo‑Puigserver1, Joan Giménez1, Maria Grazia Pennino2, Neus Marí‑Mena3, Antonio Esteban4, Elena Lloret‑Lloret1, Angelique Jadaud5, Belén Carro3, José María Bellido4 & Marta Coll1 This work combines state‑of‑the‑art methods (DNA metabarcoding) with classic approaches (visual stomach content characterization and stable isotope analyses of nitrogen (δ15N) and carbon (δ13C)) to investigate the trophic ecology of anchovy (Engraulis encrasicolus) and sardine (Sardina pilchardus) at high taxonomic and spatial resolution in the Western Mediterranean Sea. Gut contents observed are in accordance with the dietary plasticity generally described for anchovy and sardine, suggesting a diet related to the opportunistic ingestion of available prey in a certain area and/or time. Genetic tools also showed modest inter‑specifc diferences regarding ingested species. However, inter‑specifc and intra‑ specifc diferences in ingested prey frequencies and prey biomass refected a latitudinal signal that could indicate a more efective predation on large prey like krill by anchovy versus sardine, as well as a generalized higher large prey ingestion by both species southwards. In fact, both species presented lower δ15N in the northernmost area. This latitudinal gradient indicates changes in the trophic ecology of anchovy and sardine that coincide with previously described better biological conditions for fsh in the southern part of the study area as well as higher landings of both species in recent years. European sardine (Sardina pilchardus) and European anchovy (Engraulis encrasicolus) are two of the most exploited small pelagic fsh in the Mediterranean Sea, representing ca. -
An Evolutionary Preserved Intergenic Spacer in Gadiform Mitogenomes
Jørgensen et al. BMC Evolutionary Biology 2014, 14:182 http://www.biomedcentral.com/1471-2148/14/182 RESEARCH ARTICLE Open Access An evolutionary preserved intergenic spacer in gadiform mitogenomes generates a long noncoding RNA Tor Erik Jørgensen1, Ingrid Bakke2, Anita Ursvik3, Morten Andreassen3, Truls Moum1 and Steinar D Johansen1,3* Abstract Background: Vertebrate mitogenomes are economically organized and usually lack intergenic sequences other than the control region. Intergenic spacers located between the tRNAThr and tRNAPro genes (“T-P spacers”) have been observed in several taxa, including gadiform species, but information about their biological roles and putative functions is still lacking. Results: Sequence characterization of the complete European hake Merluccius merluccius mitogenome identified a complex T-P spacer ranging in size from 223–532 bp. Further analyses of 32 gadiform species, representing 8 families and 28 genera, revealed the evolutionary preserved presence of T-P spacers across all taxa. Molecular complexity of the T-P spacers was found to be coherent with the phylogenetic relationships, supporting a common ancestral origin and gain of function during codfish evolution. Intraspecific variation of T-P spacer sequences was assessed in 225 Atlantic cod specimens and revealed 26 haplotypes. Pyrosequencing data representing the mito-transcriptome poly (A) fraction in Atlantic cod identified an abundant H-strand specific long noncoding RNA of about 375 nt. The T-P spacer corresponded to the 5’ part of this transcript, which terminated within the control region in a tail-to-tail configuration with the L-strand specific transcript (the 7S RNA). Conclusions: The T-P spacer is inferred to be evolutionary preserved in gadiform mitogenomes due to gain of function through a long noncoding RNA.