Formation of Phenylacetic Acid and Benzaldehyde by Degradation Of
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556 Florida Entomologist 81(4) December, 1998
556 Florida Entomologist 81(4) December, 1998 Nontarget Hymenoptera have been collected in bucket traps placed in field crops which were baited for several different noctuid species (Adams et al. 1989, Mitchell et al. 1989, Gauthier et al. 1991), however, this is the first report for collection of L. bicolor. SUMMARY Larra bicolor was collected as a nontarget species in white bucket traps baited with sex pheromones and the floral attractant phenylacetaldehyde in an agricultural area in northwestern Alachua County, Florida. The first wasp was collected in mid- June, but larger numbers of wasps were collected in late September and early Octo- ber. More wasps were collected in traps that had phenylacetaldehyde as a lure. This collection method may aid researchers in determining the dispersal and effectiveness of this natural enemy of Scapteriscus mole crickets. REFERENCES CITED ADAMS, R. G., K. D. MURRAY, AND L. M. LOS. 1989. Effectiveness and selectivity of sex pheromone lures and traps for monitoring fall armyworm (Lepidoptera: Noctu- idae) adults in Connecticut sweet corn. J. Econ. Entomol. 82: 285-290. FRANK, J. H., J. P. PARKMAN, AND F. D. BENNETT. 1995. Larra bicolor (Hymenoptera: Sphecidae), a biological control agent of Scapteriscus mole crickets (Ortho- ptera: Gryllotalpidae), established in northern Florida. Fla. Entomol. 78: 619- 623. GAUTHIER, N. L., P. A. LOGAN, L. A. TEWKSBURY, C. F. HOLLINGSWORTH, D. C. WEBER, AND R. G. ADAMS. 1991. Field bioassay of pheromone lures and trap designs for monitoring adult corn earworm (Lepidoptera: Noctuidae) in sweet corn in southern New England. J. Econ. Entomol. 84: 1833-1836. MITCHELL, E. -
Chemical and Photochemical Studies of Unsaturated Cyclooctane Derivatives Thomas Kenneth Hall Iowa State University
Iowa State University Capstones, Theses and Retrospective Theses and Dissertations Dissertations 1965 Chemical and photochemical studies of unsaturated cyclooctane derivatives Thomas Kenneth Hall Iowa State University Follow this and additional works at: https://lib.dr.iastate.edu/rtd Part of the Organic Chemistry Commons Recommended Citation Hall, Thomas Kenneth, "Chemical and photochemical studies of unsaturated cyclooctane derivatives " (1965). Retrospective Theses and Dissertations. 3297. https://lib.dr.iastate.edu/rtd/3297 This Dissertation is brought to you for free and open access by the Iowa State University Capstones, Theses and Dissertations at Iowa State University Digital Repository. It has been accepted for inclusion in Retrospective Theses and Dissertations by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. This dissertation has been microiihned exactly as received 66—2988 HALL, Thomas Kenneth, 1936— CHEMICAL AND PHOTOCHEMICAL STUDIES OF UNSATURATED CYCLOOCTANE DERIVATIVES. Iowa State University of Science and Technology Ph.D., 1965 Chemistry, organic University Microfilms, Inc., Ann Arbor, Michigan CHEMICAL AND PHOTOCHEMICAL STUDIES OF UNSATURATED CYCLOOCTANE DERIVATIVES by Thomas Kenneth Hall A Dissertation Submitted to the Graduate Faculty in Partial Fulfillment of The Requirements for the Degree of DOCTOR OF PHILOSOPHY Major Subject; Organic Chemistry Approved: Signature was redacted for privacy. Signature was redacted for privacy. Head -
Carboligation Using the Aldol Reaction
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 1730 Carboligation using the aldol reaction A comparison of stereoselectivity and methods DERAR AL-SMADI ACTA UNIVERSITATIS UPSALIENSIS ISSN 1651-6214 ISBN 978-91-513-0472-4 UPPSALA urn:nbn:se:uu:diva-362866 2018 Dissertation presented at Uppsala University to be publicly examined in BMC C2:301, Husargatan 3, Uppsala, Friday, 30 November 2018 at 09:15 for the degree of Doctor of Philosophy. The examination will be conducted in English. Faculty examiner: Professor Ulf Nilsson (Lund University). Abstract Al-Smadi, D. 2018. Carboligation using the aldol reaction. A comparison of stereoselectivity and methods. Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 1730. 50 pp. Uppsala: Acta Universitatis Upsaliensis. ISBN 978-91-513-0472-4. The research summarized in this thesis focuses on synthesizing aldehyde and aldol compounds as substrates and products for the enzyme D-fructose-6-aldolase (FSA). Aldolases are important enzymes for the formation of carbon-carbon bonds in nature. In biological systems, aldol reactions, both cleavage and formation play central roles in sugar metabolism. Aldolases exhibit high degrees of stereoselectivity and can steer the product configurations to a given enantiomeric and diastereomeric form. To become truly useful synthetic tools, the substrate scope of these enzymes needs to become broadened. In the first project, phenylacetaldehyde derivatives were synthesized for the use as test substrates for E. coli FSA. Different methods were discussed to prepare phenylacetaldehyde derivatives, the addition of a one carbon unit to benzaldehyde derivatives using a homologation reaction was successful and was proven efficient and non-sensitive to the moisture. -
Metabolic Engineering of Escherichia Coli to High Efficient Synthesis
Zhang et al. AMB Expr (2017) 7:105 DOI 10.1186/s13568-017-0407-0 ORIGINAL ARTICLE Open Access Metabolic engineering of Escherichia coli to high efcient synthesis phenylacetic acid from phenylalanine Lihua Zhang1,2, Qian Liu1,2, Hong Pan2*, Xun Li2 and Daoyi Guo1,2* Abstract Phenylacetic acid (PAA) is a fne chemical with a high industrial demand for its widespread uses. Whereas, microor- ganic synthesis of PAA is impeded by the formation of by-product phenethyl alcohol due to quick, endogenous, and superfuous conversion of aldehydes to their corresponding alcohols, which resulted in less conversation of PAA from aldehydes. In this study, an Escherichia coli K-12 MG1655 strain with reduced aromatic aldehyde reduction (RARE) that does duty for a platform for aromatic aldehyde biosynthesis was used to prompt more PAA biosynthesis. We establish a microbial biosynthetic pathway for PAA production from the simple substrate phenylalanine in E. coli with heterolo- gous coexpression of aminotransferase (ARO8), keto acid decarboxylase (KDC) and aldehyde dehydrogenase H (AldH) gene. It was found that PAA transformation yield was up to ~94% from phenylalanine in E. coli and there was no by-product phenethyl alcohol was detected. Our results reveal the high efciency of the RARE strain for production of PAA and indicate the potential industrial applicability of this microbial platform for PAA biosynthesis. Keywords: Metabolic engineering, Phenylacetic acid, Phenylalanine, Phenylacetaldehyde Introduction utilizing a nitrile hydratase and an amidase of Rhodococ- Phenylacetic acid (PAA) has received much attention on cus equi TG328 (Gilligan et al. 1993) or an arylacetoni- account of its extensive applications, which ofer the huge trilase from Pseudomonas fuorescens EBC191 (Sosedov demand. -
Review: Synthetic Methods for Amphetamine
Review: Synthetic Methods for Amphetamine A. Allen1 and R. Ely2 1Array BioPharma Inc., Boulder, Colorado 80503 2Drug Enforcement Administration, San Francisco, CA Abstract: This review focuses on synthesis of amphetamine. The chemistry of these methods will be discussed, referenced and precursors highlighted. This review covers the period 1985 to 2009 with emphasis on stereoselective synthesis, classical non-chiral synthesis and bio-enzymatic reactions. The review is directed to the Forensic Community and thus highlights precursors, reagents, stereochemistry, type and name reactions. The article attempts to present, as best as possible, a list of references covering amphetamine synthesis from 1900 -2009. Although this is the same fundamental ground as the recent publication by K. Norman; “Clandestine Laboratory Investigating Chemist Association” 19, 3(2009)2-39, this current review offers another perspective. Keywords: Review, Stereoselective, Amphetamine, Syntheses, references, Introduction: It has been 20 years since our last review of the synthetic literature for the manufacture of amphetamine and methamphetamine. Much has changed in the world of organic transformation in this time period. Chiral (stereoselective) synthetic reactions have moved to the forefront of organic transformations and these stereoselective reactions, as well as regio-reactions and biotransformations will be the focus of this review. Within the synthesis of amphetamine, these stereoselective transformations have taken the form of organometallic reactions, enzymatic reactions, ring openings, - aminooxylations, alkylations and amination reactions. The earlier review (J. Forensic Sci. Int. 42(1989)183-189) addressed for the most part, the ―reductive‖ synthetic methods leading to this drug of abuse. It could be said that the earlier review dealt with ―classical organic transformations,‖ roughly covering the period from 1900-1985. -
Biochemical Screening and PTEN Mutation Analysis in Individuals with Autism Spectrum Disorders and Macrocephaly
European Journal of Human Genetics (2014) 22, 273–276 & 2014 Macmillan Publishers Limited All rights reserved 1018-4813/14 www.nature.com/ejhg SHORT REPORT Biochemical screening and PTEN mutation analysis in individuals with autism spectrum disorders and macrocephaly Judith A Hobert1, Rebecca Embacher2, Jessica L Mester1,3, Thomas W Frazier II1,2 and Charis Eng*,1,3,4,5 Unlike some other childhood neurodevelopmental disorders, no diagnostic biochemical marker has been identified in all individuals with an autism spectrum disorder (ASD). This deficit likely results from genetic heterogeneity among the population. Therefore, we evaluated a subset of individuals with ASDs, specifically, individuals with or without macrocephaly in the presence or absence of PTEN mutations. We sought to determine if amino or organic acid markers could be used to identify individuals with ASDs with or without macrocephaly in the presence or absence of PTEN mutations, and to establish the degree of macrocephaly in individuals with ASDs and PTEN mutation. Urine, blood and occipital–frontal circumference (OFC) measurements were collected from 69 individuals meeting DSM-IV-TR criteria. Urine and plasma samples were subjected to amino and organic acid analyses. PTEN was Sanger-sequenced from germline genomic DNA. Germline PTEN mutations were identified in 27% (6/22) of the macrocephalic ASD population. All six PTEN mutation-positive individuals were macrocephalic with average OFC þ 4.35 standard deviations (SDs) above the mean. No common biochemical abnormalities were identified in macrocephalic ASD individuals with or without PTEN mutations. In contrast, among the collective ASD population, elevation of urine aspartic acid (87%; 54/62), plasma taurine (69%; 46/67) and reduction of plasma cystine (72%; 46/64) were observed. -
Formation of Aldehydes by Direct Oxidative Degradation of Amino
BrewingScience July / August 2013 (Vol. 66) 104 Monatsschrift für Brauwissenschaft P. C. Wietstock, and F.-J. Methner The scientifi c organ Yearbook 2006 of the Weihenstephan Scientifi c Centre of the TU Munich of the Versuchs- und Lehranstalt für Brauerei in Berlin (VLB) Formationof the Scientifi c Station for Breweries in Munich of Aldehydes by Direct Oxidative of the Veritas laboratory in Zurich of Doemens wba – Technikum GmbH in Graefelfi ng/Munich www.brauwissenschaft.de Degradation of Amino Acids via Hydroxyl and Ethoxy Radical Attack in Buffered Model Solutions The formation of aldehydes in bottled beer is promoted by the presence of oxygen and transition metal ions. In this paper, a so far unrevealed pathway to explain this phenomenon is presented. Leucine, isoleucine, and 2+ phenylalanine were oxidized by H2O2-Fe in ‘beer-like’ buffered model solutions (pH 4.5; 5 % (v/v) ethanol) at room temperature thereby yielding 3-methylbutanal, 2-methylbutanal, phenylacetaldehyde, and benzaldehyde, respectively, as measured and identified by solvent extraction and HRGC-MS. Further trials revealed that the aldehydes formed were significantly correlated with radical concentration as determined by electron spin resonance (ESR) spectroscopy indicating that hydroxyl radicals (•OH) and ethoxy radicals (EtO•) are involved in the pathway. A reaction route for ‘beer-like’ model systems is featured and confirmed by a storage trial in which a steady increase of aldehydes over a time span of 18 days could be demonstrated. Descriptors: aldehydes, amino acids, electron spin resonance spectroscopy, hydroxyl radicals 1 Introduction beer. In comparison to other carbonyls, (E)-2-nonenal has a very low determined flavor threshold of 0.03–0.05 ppb [57, 66] and is Beer instability has many faces and can be divided into a number accompanied with the so-called “cardboard” or “bready” flavors [6, of categories such as physical-, flavor-, microbiological-, foam-, and 7, 34, 38, 46]. -
Retropath2.0: a Retrosynthesis Workflow for Metabolic Engineers
bioRxiv preprint doi: https://doi.org/10.1101/141721; this version posted June 29, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. RetroPath2.0: a retrosynthesis workflow for metabolic engineers Baudoin Delépine1,2,3,§, Thomas Duigou3,§, Pablo Carbonell4, Jean-Loup Faulon3,1,2,4,* 1 CNRS-UMR8030 / Laboratoire iSSB, Université Paris-Saclay, Évry 91000, France 2 CEA, DRF, IG, Genoscope, Évry 91000, France 3 Micalis Institute, INRA, AgroParisTech, Université Paris-Saclay, 78350 Jouy-en-Josas, France 4 SYNBIOCHEM Centre, Manchester Institute of Biotechnology, University of Manchester, Manchester, UK §: These authors contributed equally to this work. *: Corresponding author at: Micalis, Institut National de la Recherche Agronomique, Domaine de Vilvert, 78352 JOUY-EN-JOSAS, FRANCE; E-mail address: [email protected] Highlights • State-of-the-art Computer-Aided Design retrosynthesis solutions lack open source and ease of use • We propose RetroPath2.0 a modular and open-source workflow to perform retrosynthesis • RetroPath2.0 computes reaction network between Source and Sink sets of compounds • RetroPath2.0 is distributed as a KNIME workflow for desktop computers • RetroPath2.0 is ready-for-use and distributed with reaction rules Funding This work was supported by the French National Research Agency [ANR-15-CE1-0008], the Biotechnology and Biological Sciences Research Council, Centre for synthetic biology of fine and speciality chemicals [BB/M017702/1]; Synthetic Biology Applications for Protective Materials [EP/N025504/1], and GIP Genopole. -
[Beta]-Keto Sulfoxides Leo Arthur Ochrymowycz Iowa State University
Iowa State University Capstones, Theses and Retrospective Theses and Dissertations Dissertations 1969 Chemistry of [beta]-keto sulfoxides Leo Arthur Ochrymowycz Iowa State University Follow this and additional works at: https://lib.dr.iastate.edu/rtd Part of the Organic Chemistry Commons Recommended Citation Ochrymowycz, Leo Arthur, "Chemistry of [beta]-keto sulfoxides " (1969). Retrospective Theses and Dissertations. 3766. https://lib.dr.iastate.edu/rtd/3766 This Dissertation is brought to you for free and open access by the Iowa State University Capstones, Theses and Dissertations at Iowa State University Digital Repository. It has been accepted for inclusion in Retrospective Theses and Dissertations by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. This dissertation has been microfihned exactly as received 70-7726 OCHRYMOWYCZ, Leo Arthur, 1943- CHEMISTRY OF p -KETO SULFOXIDES. Iowa State University, Ph.D., 1969 Chemistry, organic University Microfilms, Inc., Ann Arbor, Michigan CHEMISTRY OF jg-KETO SULFOXIDES by Leo Arthur Ochrymowycz A Dissertation Submitted to the Graduate Faculty in Partial Fulfillment of The Requirements for the Degree of DOCTOR OF PHILOSOPHY Major Subject ; Organic Chemistry Approved : Signature was redacted for privacy. f Major Work Signature was redacted for privacy. d of Maj Department Signature was redacted for privacy. Graduate College Iowa State University Of Science and Technology Ames, Iowa 1969 il TABLE OP CONTENTS Page -
Engineering an Alcohol Dehydrogenase for Balancing
Research Article Cite This: ACS Sustainable Chem. Eng. 2019, 7, 15706−15714 pubs.acs.org/journal/ascecg Engineering an Alcohol Dehydrogenase for Balancing Kinetics in NADPH Regeneration with 1,4-Butanediol as a Cosubstrate † # † # ‡ § † † † Guochao Xu, , Cheng Zhu, , Aitao Li, Yan Ni, Ruizhi Han, Jieyu Zhou, and Ye Ni*, † Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi 214122, Jiangsu, China ‡ Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Hubei Key Laboratory of Industrial Biotechnology, College of Life Sciences, Hubei University, Wuhan 430062, China § Department of Biomedical Engineering, Eindhoven University of Technology, NL-5600 Eindhoven, MB, Netherlands *S Supporting Information ABSTRACT: Cofactor regeneration using diols as “smart cosubstrates” is one of the most promising approaches, due to the thermodynamic preference and 0.5-equiv requirement. In order to establish an efficient NADPH regeneration system with 1,4-butanediol (1,4-BD), a NADP+- dependent alcohol dehydrogenase from Kluyveromyces polysporus (KpADH) was engineered to solve the kinetic imbalance. Several hotspots were identified through molecular dynamic simulation and subjected to saturation and combinatorial mutagenesis. Variant KpADHV84I/Y127M −1 exhibited a lower KM of 15.1 mM and a higher kcat of 30.1 min than WTKpADH. The oxidation of 1,4-BD to 4-hydroxybutanal was found to be the rate-limiting step, for which the kcat/KM value of double mutant −1· −1 KpADHV84I/Y127M was 2.00 min mM , 11.6-fold higher than that of WT KpADH. KpADHV84I/Y127M preferred diols with a longer chain length − (C5 C6). The ratio of kcat/KM toward 2-hydroxytetrahydrofuran (2-HTHF), in comparison to 1,4-BD, in KpADHV84I/Y127M was dramatically reduced by almost 100-fold compared to WTKpADH, which was advantageous for NADPH regeneration. -
Publishers Version
Engineering an alcohol dehydrogenase for nalancing kinetics in NADPH regeneration with 1,4-butanediol as a cosubstrate Citation for published version (APA): Xu, G., Zhu, C., Li, A., Ni, Y., Han, R., Zhou, J., & Ni, Y. (2019). Engineering an alcohol dehydrogenase for nalancing kinetics in NADPH regeneration with 1,4-butanediol as a cosubstrate. ACS Sustainable Chemistry and Engineering, 7(18), 15706-15714. https://doi.org/10.1021/acssuschemeng.9b03879 Document license: TAVERNE DOI: 10.1021/acssuschemeng.9b03879 Document status and date: Published: 16/09/2019 Document Version: Publisher’s PDF, also known as Version of Record (includes final page, issue and volume numbers) Please check the document version of this publication: • A submitted manuscript is the version of the article upon submission and before peer-review. There can be important differences between the submitted version and the official published version of record. People interested in the research are advised to contact the author for the final version of the publication, or visit the DOI to the publisher's website. • The final author version and the galley proof are versions of the publication after peer review. • The final published version features the final layout of the paper including the volume, issue and page numbers. Link to publication General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. • Users may download and print one copy of any publication from the public portal for the purpose of private study or research. -
Tomato Aromatic Amino Acid Decarboxylases Participate in Synthesis of the Flavor Volatiles 2-Phenylethanol and 2-Phenylacetaldehyde
Tomato aromatic amino acid decarboxylases participate in synthesis of the flavor volatiles 2-phenylethanol and 2-phenylacetaldehyde Denise Tieman*, Mark Taylor*, Nicolas Schauer†, Alisdair R. Fernie†, Andrew D. Hanson*, and Harry J. Klee*‡ *Department of Horticultural Sciences, University of Florida, P.O. Box 110690, Gainesville, FL 32611-0690; and †Max-Planck Institut fu¨r Molekulare Pflanzenphysiologie, Am Mu¨hlenberg 1, 14476 Golm-Potsdam, Germany Communicated by Hans Janos Kende, Michigan State University, East Lansing, MI, March 27, 2006 (received for review February 3, 2006) An important phenylalanine-derived volatile compound produced also probably related to their attractiveness to mammals and other by plants is 2-phenylethanol. It is a major contributor to flavor in seed dispersers (9). Such multiple roles in defense and reproduction many foods, including fresh fruits, such as tomato, and an insect- suggest that regulation of their synthesis is likely to be critical to the attracting scent in roses and many other flowers. Despite the plant. centrality of 2-phenylethanol to flavor and fragrance, the plant Despite the importance of 2-phenylacetaldehyde and 2-phenyl- genes responsible for its synthesis have not been identified. Here, ethanol to flavor and aroma, it is not clear how plants synthesize we describe a biosynthetic pathway for 2-phenylethanol and other them. The yeast Saccharomyces cerevisiae produces 2-phenylethanol phenylalanine-derived volatiles in tomato fruits and a small family from phenylalanine via phenylpyruvate and 2-phenylacetaldehyde of decarboxylases (LeAADC1A, LeAADC1B, and LeAADC2) that can (10). Deuterium-labeling studies in rose (Rosa damascena Mill.) mediate that pathway’s first step. These enzymes each catalyze indicated that there might be as many as four pathways of synthesis conversion of phenylalanine to phenethylamine and tyrosine to (10).