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Extinction Risk and Conservation of the World's Sharks and Rays
RESEARCH ARTICLE elife.elifesciences.org Extinction risk and conservation of the world’s sharks and rays Nicholas K Dulvy1,2*, Sarah L Fowler3, John A Musick4, Rachel D Cavanagh5, Peter M Kyne6, Lucy R Harrison1,2, John K Carlson7, Lindsay NK Davidson1,2, Sonja V Fordham8, Malcolm P Francis9, Caroline M Pollock10, Colin A Simpfendorfer11,12, George H Burgess13, Kent E Carpenter14,15, Leonard JV Compagno16, David A Ebert17, Claudine Gibson3, Michelle R Heupel18, Suzanne R Livingstone19, Jonnell C Sanciangco14,15, John D Stevens20, Sarah Valenti3, William T White20 1IUCN Species Survival Commission Shark Specialist Group, Department of Biological Sciences, Simon Fraser University, Burnaby, Canada; 2Earth to Ocean Research Group, Department of Biological Sciences, Simon Fraser University, Burnaby, Canada; 3IUCN Species Survival Commission Shark Specialist Group, NatureBureau International, Newbury, United Kingdom; 4Virginia Institute of Marine Science, College of William and Mary, Gloucester Point, United States; 5British Antarctic Survey, Natural Environment Research Council, Cambridge, United Kingdom; 6Research Institute for the Environment and Livelihoods, Charles Darwin University, Darwin, Australia; 7Southeast Fisheries Science Center, NOAA/National Marine Fisheries Service, Panama City, United States; 8Shark Advocates International, The Ocean Foundation, Washington, DC, United States; 9National Institute of Water and Atmospheric Research, Wellington, New Zealand; 10Global Species Programme, International Union for the Conservation -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
Updated Checklist of Marine Fishes (Chordata: Craniata) from Portugal and the Proposed Extension of the Portuguese Continental Shelf
European Journal of Taxonomy 73: 1-73 ISSN 2118-9773 http://dx.doi.org/10.5852/ejt.2014.73 www.europeanjournaloftaxonomy.eu 2014 · Carneiro M. et al. This work is licensed under a Creative Commons Attribution 3.0 License. Monograph urn:lsid:zoobank.org:pub:9A5F217D-8E7B-448A-9CAB-2CCC9CC6F857 Updated checklist of marine fishes (Chordata: Craniata) from Portugal and the proposed extension of the Portuguese continental shelf Miguel CARNEIRO1,5, Rogélia MARTINS2,6, Monica LANDI*,3,7 & Filipe O. COSTA4,8 1,2 DIV-RP (Modelling and Management Fishery Resources Division), Instituto Português do Mar e da Atmosfera, Av. Brasilia 1449-006 Lisboa, Portugal. E-mail: [email protected], [email protected] 3,4 CBMA (Centre of Molecular and Environmental Biology), Department of Biology, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal. E-mail: [email protected], [email protected] * corresponding author: [email protected] 5 urn:lsid:zoobank.org:author:90A98A50-327E-4648-9DCE-75709C7A2472 6 urn:lsid:zoobank.org:author:1EB6DE00-9E91-407C-B7C4-34F31F29FD88 7 urn:lsid:zoobank.org:author:6D3AC760-77F2-4CFA-B5C7-665CB07F4CEB 8 urn:lsid:zoobank.org:author:48E53CF3-71C8-403C-BECD-10B20B3C15B4 Abstract. The study of the Portuguese marine ichthyofauna has a long historical tradition, rooted back in the 18th Century. Here we present an annotated checklist of the marine fishes from Portuguese waters, including the area encompassed by the proposed extension of the Portuguese continental shelf and the Economic Exclusive Zone (EEZ). The list is based on historical literature records and taxon occurrence data obtained from natural history collections, together with new revisions and occurrences. -
Solomon Islands Marine Life Information on Biology and Management of Marine Resources
Solomon Islands Marine Life Information on biology and management of marine resources Simon Albert Ian Tibbetts, James Udy Solomon Islands Marine Life Introduction . 1 Marine life . .3 . Marine plants ................................................................................... 4 Thank you to the many people that have contributed to this book and motivated its production. It Seagrass . 5 is a collaborative effort drawing on the experience and knowledge of many individuals. This book Marine algae . .7 was completed as part of a project funded by the John D and Catherine T MacArthur Foundation Mangroves . 10 in Marovo Lagoon from 2004 to 2013 with additional support through an AusAID funded community based adaptation project led by The Nature Conservancy. Marine invertebrates ....................................................................... 13 Corals . 18 Photographs: Simon Albert, Fred Olivier, Chris Roelfsema, Anthony Plummer (www.anthonyplummer. Bêche-de-mer . 21 com), Grant Kelly, Norm Duke, Corey Howell, Morgan Jimuru, Kate Moore, Joelle Albert, John Read, Katherine Moseby, Lisa Choquette, Simon Foale, Uepi Island Resort and Nate Henry. Crown of thorns starfish . 24 Cover art: Steven Daefoni (artist), funded by GEF/IWP Fish ............................................................................................ 26 Cover photos: Anthony Plummer (www.anthonyplummer.com) and Fred Olivier (far right). Turtles ........................................................................................... 30 Text: Simon Albert, -
New Zealand Fishes a Field Guide to Common Species Caught by Bottom, Midwater, and Surface Fishing Cover Photos: Top – Kingfish (Seriola Lalandi), Malcolm Francis
New Zealand fishes A field guide to common species caught by bottom, midwater, and surface fishing Cover photos: Top – Kingfish (Seriola lalandi), Malcolm Francis. Top left – Snapper (Chrysophrys auratus), Malcolm Francis. Centre – Catch of hoki (Macruronus novaezelandiae), Neil Bagley (NIWA). Bottom left – Jack mackerel (Trachurus sp.), Malcolm Francis. Bottom – Orange roughy (Hoplostethus atlanticus), NIWA. New Zealand fishes A field guide to common species caught by bottom, midwater, and surface fishing New Zealand Aquatic Environment and Biodiversity Report No: 208 Prepared for Fisheries New Zealand by P. J. McMillan M. P. Francis G. D. James L. J. Paul P. Marriott E. J. Mackay B. A. Wood D. W. Stevens L. H. Griggs S. J. Baird C. D. Roberts‡ A. L. Stewart‡ C. D. Struthers‡ J. E. Robbins NIWA, Private Bag 14901, Wellington 6241 ‡ Museum of New Zealand Te Papa Tongarewa, PO Box 467, Wellington, 6011Wellington ISSN 1176-9440 (print) ISSN 1179-6480 (online) ISBN 978-1-98-859425-5 (print) ISBN 978-1-98-859426-2 (online) 2019 Disclaimer While every effort was made to ensure the information in this publication is accurate, Fisheries New Zealand does not accept any responsibility or liability for error of fact, omission, interpretation or opinion that may be present, nor for the consequences of any decisions based on this information. Requests for further copies should be directed to: Publications Logistics Officer Ministry for Primary Industries PO Box 2526 WELLINGTON 6140 Email: [email protected] Telephone: 0800 00 83 33 Facsimile: 04-894 0300 This publication is also available on the Ministry for Primary Industries website at http://www.mpi.govt.nz/news-and-resources/publications/ A higher resolution (larger) PDF of this guide is also available by application to: [email protected] Citation: McMillan, P.J.; Francis, M.P.; James, G.D.; Paul, L.J.; Marriott, P.; Mackay, E.; Wood, B.A.; Stevens, D.W.; Griggs, L.H.; Baird, S.J.; Roberts, C.D.; Stewart, A.L.; Struthers, C.D.; Robbins, J.E. -
Accepted Manuscript
ACCEPTED MANUSCRIPT miR-24 is involved in vertebrate LC-PUFA biosynthesis as demonstrated in marine teleost Siganus canaliculatus Cuiying Chen1#, Shuqi Wang1#, Mei Zhang1, Baojia Chen1, Cuihong You1, Dizhi Xie2, Yang Liu1, Óscar Monroig3, Douglas R. Tocher4, Khor Waiho1, Yuanyou Li2* 1 Guangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou 515063, China. 2 College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China. 3 Instituto de Acuicultura Torre de la Sal, Consejo Superior de Investigaciones Científicas (IATS-CSIC), 12595 Ribera de Cabanes, Castellón, Spain 4 Institute of Aquaculture, Faculty of Natural Sciences, University of Stirling, Stirling FK9 4LA, Scotland, UK. Present address: College of Marine Sciences, South China Agricultural University, 483 Wushan Road, Guangzhou 510642, China ACCEPTED MANUSCRIPT # These authors contributed equally to this work. * To whom correspondence should be addressed. Email: [email protected]; tel/fax number: +86 20 85283529. 1 ACCEPTED MANUSCRIPT ABSTRACT Recently, microRNAs (miRNAs) have emerged as crucial regulators of lipid metabolism. However, the miRNA-mediated regulatory mechanism on long-chain (≥C20) polyunsaturated fatty acids (LC-PUFA) biosynthesis in vertebrates remains largely unknown. Here, we address a potentially important role of miRNA-24 (miR-24) in the regulation of LC-PUFA biosynthesis in rabbitfish Siganus canaliculatus. miR-24 showed significantly higher abundance in liver of rabbitfish reared in brackish water than in seawater for fish fed vegetable oil diets and in S. canaliculatus hepatocyte line (SCHL) cells incubated with alpha-linolenic acid (ALA) than the control group. Similar expression patterns were also observed on the expression of sterol regulatory element-binding protein-1 (srebp1) and LC-PUFA biosynthesis related genes. -
Bioinvasions in the Mediterranean Sea 2 7
Metamorphoses: Bioinvasions in the Mediterranean Sea 2 7 B. S. Galil and Menachem Goren Abstract Six hundred and eighty alien marine multicellular species have been recorded in the Mediterranean Sea, with many establishing viable populations and dispersing along its coastline. A brief history of bioinvasions research in the Mediterranean Sea is presented. Particular attention is paid to gelatinous invasive species: the temporal and spatial spread of four alien scyphozoans and two alien ctenophores is outlined. We highlight few of the dis- cernible, and sometimes dramatic, physical alterations to habitats associated with invasive aliens in the Mediterranean littoral, as well as food web interactions of alien and native fi sh. The propagule pressure driving the Erythraean invasion is powerful in the establishment and spread of alien species in the eastern and central Mediterranean. The implications of the enlargement of Suez Canal, refl ecting patterns in global trade and economy, are briefl y discussed. Keywords Alien • Vectors • Trends • Propagule pressure • Trophic levels • Jellyfi sh • Mediterranean Sea Brief History of Bioinvasion Research came suddenly with the much publicized plans of the in the Mediterranean Sea Saint- Simonians for a “Canal de jonction des deux mers” at the Isthmus of Suez. Even before the Suez Canal was fully The eminent European marine naturalists of the sixteenth excavated, the French zoologist Léon Vaillant ( 1865 ) argued century – Belon, Rondelet, Salviani, Gesner and Aldrovandi – that the breaching of the isthmus will bring about species recorded solely species native to the Mediterranean Sea, migration and mixing of faunas, and advocated what would though mercantile horizons have already expanded with be considered nowadays a ‘baseline study’. -
Microbiome Patterns Across the Gastrointestinal Tract of the Rabbitfish Siganus Fuscescens
Microbiome patterns across the gastrointestinal tract of the rabbitfish Siganus fuscescens Shaun Nielsen, Jackson Wilkes Walburn, Adriana Vergés, Torsten Thomas and Suhelen Egan Centre for Marine Bio-Innovation and School of Biological Earth and Environmental Sciences, University of New South Wales, Sydney, Australia ABSTRACT Most of our knowledge regarding the biodiversity of gut microbes comes from terrestrial organisms or marine species of economic value, with less emphasis on ecologically important species. Here we investigate the bacterial composition associated with the gut of Siganus fuscescens, a rabbitfish that plays an important ecological role in coastal ecosystems by consuming seaweeds. Members of Firmicutes, Bacteroidetes and delta- Proteobacteria were among the dominant taxa across samples taken from the contents and the walls (sites) of the midgut and hindgut (location). Despite the high variability among individual fish, we observed statistically significant differences in beta-diversity between gut sites and gut locations. Some bacterial taxa low in abundance in the midgut content (e.g., Desulfovibrio) were found in greater abundances on the midgut wall and within the hindgut, suggesting that the gut may select for specific groups of environmental and/or food-associated microorganisms. In contrast, some distinct taxa present in the midgut content (e.g., Synechococcus) were noticeably reduced in the midgut wall and hindgut, and are thus likely to be representative of transient microbiota. This is the first assessment of -
Chondrichthyes: Carcharhiniformes: Scyliorhinidae) from the Gulf of Aden
Zootaxa 3881 (1): 001–016 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3881.1.1 http://zoobank.org/urn:lsid:zoobank.org:pub:809A2B3B-2C2C-4D26-A50F-6D5185D3BD6A Apristurus breviventralis, a new species of deep-water catshark (Chondrichthyes: Carcharhiniformes: Scyliorhinidae) from the Gulf of Aden JUNRO KAWAUCHI1,4, SIMON WEIGMANN2 & KAZUHIRO NAKAYA3 1Chair of Marine Biology and Biodiversity (Systematic Ichthyology), Graduate School of Fisheries Sciences, Hokkaido University, 3- 3-1 Minato-cho, Hakodate Hokkaido 041-8611, Japan. E-mail: junro@ frontier.hokudai.ac.jp 2Biocenter Grindel and Zoological Museum, University of Hamburg, Section Ichthyology, Martin-Luther-King-Platz 3, D-20146 Hamburg, Germany. E-mail: [email protected] 3Hokkaido University, 3-1-1 Minato-cho, Hakodate, Hokkaido 041-8611, Japan. E-mail: [email protected] 4Corresponding author Abstract A new deep-water catshark of the genus Apristurus Garman, 1913 is described based on nine specimens from the Gulf of Aden in the northwestern Indian Ocean. Apristurus breviventralis sp. nov. belongs to the ‘brunneus group’ of the genus and is characterized by having pectoral-fin tips reaching beyond the midpoint between the paired fin bases, a much shorter pectoral-pelvic space than the anal-fin base, a low and long-based anal fin, and a first dorsal fin located behind pelvic-fin insertion. The new species most closely resembles the western Atlantic species Apristurus canutus, but is distinguishable in having greater nostril length than internarial width and longer claspers in adult males. -
Life History Aspects and Taxonomy of Deep-Sea Chondrichthyans in the Southwestern Indian Ocean Paul Joseph Clerkin San Jose State University
San Jose State University SJSU ScholarWorks Master's Theses Master's Theses and Graduate Research Fall 2017 Life History Aspects and Taxonomy of Deep-Sea Chondrichthyans in the Southwestern Indian Ocean Paul Joseph Clerkin San Jose State University Follow this and additional works at: https://scholarworks.sjsu.edu/etd_theses Recommended Citation Clerkin, Paul Joseph, "Life History Aspects and Taxonomy of Deep-Sea Chondrichthyans in the Southwestern Indian Ocean" (2017). Master's Theses. 4869. DOI: https://doi.org/10.31979/etd.ms3e-x835 https://scholarworks.sjsu.edu/etd_theses/4869 This Thesis is brought to you for free and open access by the Master's Theses and Graduate Research at SJSU ScholarWorks. It has been accepted for inclusion in Master's Theses by an authorized administrator of SJSU ScholarWorks. For more information, please contact [email protected]. LIFE HISTORY ASPECTS AND TAXONOMY OF DEEP-SEA CHONDRICHTHYANS IN THE SOUTHWESTERN INDIAN OCEAN A Thesis Presented to the Faculty of Moss Landing Marine Laboratories and San José State University In Partial Fulfilment of the Requirements for the Degree Master of Science by Paul J. Clerkin December 2017 © 2017 Paul J. Clerkin ALL RIGHTS RESERVED The Designated Thesis Committee Approves the Thesis Titled LIFE HISTORY ASPECTS AND TAXONOMY OF DEEP-SEA CHONDRICHTHYANS IN THE SOUTHWESTERN INDIAN OCEAN by Paul J. Clerkin APPROVED FOR THE DEPARTMENT OF MARINE SCIENCE SAN JOSÉ STATE UNIVERSITY December 2017 Dr. David A. Ebert Moss Landing Marine Laboratories Dr. Scott Hamilton Moss Landing Marine Laboratories Dr. Kenneth H. Coale Moss Landing Marine Laboratories ABSTRACT ASPECTS OF THE LIFE HISTORY AND TAXONOMY OF DEEP-SEA CHONDRICHTHYANS IN THE SOUTHWESTERN INDIAN OCEAN by Paul J. -
Fossil Chimaeroid Remains (Chondrichthyes: Holocephali) from Williamsburg County, South Carolina, Usa
Paludicola 8(1):37-48 September 2010 © by the Rochester Institute of Vertebrate Paleontology FOSSIL CHIMAEROID REMAINS (CHONDRICHTHYES: HOLOCEPHALI) FROM WILLIAMSBURG COUNTY, SOUTH CAROLINA, USA David J. Cicimurri Campbell Geology Museum, Clemson University, Clemson, South Carolina 29634 <[email protected]> ABSTRACT Three fossil holocephalian tooth plates have been recovered in Kingstree, Williamsburg County, South Carolina. All of the fossils were collected from a lag deposit containing a temporally mixed vertebrate assemblage. Two specimens, an incomplete left mandibular tooth plate and an incomplete left palatine tooth plate, are Edaphodon and compare favorably to E. mirificus. The third specimen is an incomplete and highly abraded right mandibular tooth plate from a very young individual that is questionably referred to Edaphodon. The tooth plates were associated with Cretaceous shark and dinosaur teeth, Paleocene shark and crocodilian teeth and turtle bones, and Plio-Pleistocene shark teeth and terrestrial mammal remains. The source of the Cretaceous fossils is arguably from Maastrichtian (late Cretaceous) strata (i.e., Peedee or Steel Creek formations), whereas Paleocene fossils are likely derived from the Danian (lower Paleocene) Rhems Formation. These fossils were probably concentrated together during Plio- Pleistocene sea level highstand, at which time the younger vertebrate material was deposited. INTRODUCTION Fossils from Clapp Creek came to the attention of Rudy Mancke (then Curator of Natural History at the Some of the geologic history of the South South Carolina State Museum) in the mid 1980s, and Carolina Coastal Plain is preserved as a complex soon thereafter he alerted Bruce Lampright (then of stratigraphic sequence that is far from completely Coastal Carolina University) to the fossil deposits to be understood. -
Biomechanics of Locomotion in Sharks, Rays, and Chimaeras
5 Biomechanics of Locomotion in Sharks, Rays, and Chimaeras Anabela M.R. Maia, Cheryl A.D. Wilga, and George V. Lauder CONTENTS 5.1 Introduction 125 5.1.1 Approaches to Studying Locomotion in Chondrichthyans 125 5.1.2 Diversity of Locomotory Modes in Chondrichthyans 127 5.1.3 Body Form and Fin Shapes 127 5.2 Locomotion in Sharks 128 5.2.1 Function of the Body during Steady Locomotion and Vertical Maneuvering 128 5.2.2 Function of the Caudal Fin during Steady Locomotion and Vertical Maneuvering 130 5.2.3 Function of the Pectoral Fins during Locomotion 134 5.2.3.1 Anatomy of the Pectoral Fins 134 5.2.3.2 Role of the Pectoral Fins during Steady Swimming 136 5.2.3.3 Role of the Pectoral Fins during Vertical Maneuvering 138 5.2.3.4 Function of the Pectoral Fins during Benthic Station-Holding 139 5.2.3.5 Motor Activity in the Pectoral Fins 139 5.2.4 Routine Maneuvers and Escape Responses 140 5.2.5 Synthesis 141 5.3 Locomotion in Skates and Rays 142 5.4 Locomotion in Holocephalans 145 5.5 Material Properties of Chondrichthyan Locomotor Structures 146 5.6 Future Directions 147 Acknowledgments 148 References 148 5.1.1 Approaches to Studying 5.1 Introduction Locomotion in Chondrichthyans The body form of sharks is notable for the distinctive Historically, many attempts have been made to under- heterocercal tail with external morphological asymme- stand the function of the median and paired fins in try present in most taxa and the ventrolateral winglike sharks and rays, and these studies have included work pectoral fins extending laterally from the body (Figure with models (Affleck.