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The Lichens' Microbiota, Still a Mystery?
fmicb-12-623839 March 24, 2021 Time: 15:25 # 1 REVIEW published: 30 March 2021 doi: 10.3389/fmicb.2021.623839 The Lichens’ Microbiota, Still a Mystery? Maria Grimm1*, Martin Grube2, Ulf Schiefelbein3, Daniela Zühlke1, Jörg Bernhardt1 and Katharina Riedel1 1 Institute of Microbiology, University Greifswald, Greifswald, Germany, 2 Institute of Plant Sciences, Karl-Franzens-University Graz, Graz, Austria, 3 Botanical Garden, University of Rostock, Rostock, Germany Lichens represent self-supporting symbioses, which occur in a wide range of terrestrial habitats and which contribute significantly to mineral cycling and energy flow at a global scale. Lichens usually grow much slower than higher plants. Nevertheless, lichens can contribute substantially to biomass production. This review focuses on the lichen symbiosis in general and especially on the model species Lobaria pulmonaria L. Hoffm., which is a large foliose lichen that occurs worldwide on tree trunks in undisturbed forests with long ecological continuity. In comparison to many other lichens, L. pulmonaria is less tolerant to desiccation and highly sensitive to air pollution. The name- giving mycobiont (belonging to the Ascomycota), provides a protective layer covering a layer of the green-algal photobiont (Dictyochloropsis reticulata) and interspersed cyanobacterial cell clusters (Nostoc spec.). Recently performed metaproteome analyses Edited by: confirm the partition of functions in lichen partnerships. The ample functional diversity Nathalie Connil, Université de Rouen, France of the mycobiont contrasts the predominant function of the photobiont in production Reviewed by: (and secretion) of energy-rich carbohydrates, and the cyanobiont’s contribution by Dirk Benndorf, nitrogen fixation. In addition, high throughput and state-of-the-art metagenomics and Otto von Guericke University community fingerprinting, metatranscriptomics, and MS-based metaproteomics identify Magdeburg, Germany Guilherme Lanzi Sassaki, the bacterial community present on L. -
Molecular Phylogenetic Study at the Generic Boundary Between the Lichen-Forming Fungi Caloplaca and Xanthoria (Ascomycota, Teloschistaceae)
Mycol. Res. 107 (11): 1266–1276 (November 2003). f The British Mycological Society 1266 DOI: 10.1017/S0953756203008529 Printed in the United Kingdom. Molecular phylogenetic study at the generic boundary between the lichen-forming fungi Caloplaca and Xanthoria (Ascomycota, Teloschistaceae) Ulrik SØCHTING1 and Franc¸ ois LUTZONI2 1 Department of Mycology, Botanical Institute, University of Copenhagen, O. Farimagsgade 2D, DK-1353 Copenhagen K, Denmark. 2 Department of Biology, Duke University, Durham, NC 27708-0338, USA. E-mail : [email protected] Received 5 December 2001; accepted 5 August 2003. A molecular phylogenetic analysis of rDNA was performed for seven Caloplaca, seven Xanthoria, one Fulgensia and five outgroup species. Phylogenetic hypotheses are constructed based on nuclear small and large subunit rDNA, separately and in combination. Three strongly supported major monophyletic groups were revealed within the Teloschistaceae. One group represents the Xanthoria fallax-group. The second group includes three subgroups: (1) X. parietina and X. elegans; (2) basal placodioid Caloplaca species followed by speciations leading to X. polycarpa and X. candelaria; and (3) a mixture of placodioid and endolithic Caloplaca species. The third main monophyletic group represents a heterogeneous assemblage of Caloplaca and Fulgensia species with a drastically different metabolite content. We report here that the two genera Caloplaca and Xanthoria, as well as the subgenus Gasparrinia, are all polyphyletic. The taxonomic significance of thallus morphology in Teloschistaceae and the current delimitation of the genus Xanthoria is discussed in light of these results. INTRODUCTION Taxonomy of Teloschistaceae and its genera The Teloschistaceae is a well-delimited family of Hawksworth & Eriksson (1986) assigned the Teloschis- lichenized fungi. -
Foliicolous Lichens and Their Lichenicolous Fungi Collected During the Smithsonian International Cryptogamic Expedition to Guyana 1996
45 Tropical Bryology 15: 45-76, 1998 Foliicolous lichens and their lichenicolous fungi collected during the Smithsonian International Cryptogamic Expedition to Guyana 1996 Robert Lücking Lehrstuhl für Pflanzensystematik, Universität Bayreuth, D-95447 Bayreuth, Germany Abstract: A total of 233 foliicolous lichen species and 18 lichenicolous fungi are reported from Guyana as a result of the Smithsonian „International Cryptogamic Expedition to Guyana“ 1996. Three lichens and two lichenicolous fungi are new to science: Arthonia grubei sp.n., Badimia subelegans sp.n., Calopadia pauciseptata sp.n., Opegrapha matzeri sp.n. (lichenicolous on Amazonomyces sprucei), and Pyrenidium santessonii sp.n. (lichenicolous on Bacidia psychotriae). The new combination Strigula janeirensis (Bas.: Phylloporina janeirensis; syn.: Raciborskiella janeirensis) is proposed. Apart from Amazonomyces sprucei and Bacidia psychotriae, Arthonia lecythidicola (with the lichenicolous A. pseudopegraphina) and Byssolecania deplanata (with the lichenicolous Opegrapha cf. kalbii) are reported as new hosts for lichenicolous fungi. Arthonia pseudopegraphina growing on A. lecythidicola is the first known case of adelphoparasitism at generic level in foliicolous Arthonia. Arthonia flavoverrucosa, Badimia polillensis, and Byssoloma vezdanum are new records for the Neotropics, and 115 species are new for Guyana, resulting in a total of c. 280 genuine foliicolous species reported for that country, while Porina applanata and P. verruculosa are excluded from its flora. The foliicolous lichen flora of Guyana is representative for the Guianas (Guyana, Suriname, French Guiana) and has great affinities with the Amazon region, while the degree of endemism is low. A characteristic species for this area is Amazonomyces sprucei. Species composition is typical of Neotropical lowland to submontane humid forests, with a dominance of the genera Porina, Strigula, and Mazosia. -
Mycosphere Notes 225–274: Types and Other Specimens of Some Genera of Ascomycota
Mycosphere 9(4): 647–754 (2018) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/9/4/3 Copyright © Guizhou Academy of Agricultural Sciences Mycosphere Notes 225–274: types and other specimens of some genera of Ascomycota Doilom M1,2,3, Hyde KD2,3,6, Phookamsak R1,2,3, Dai DQ4,, Tang LZ4,14, Hongsanan S5, Chomnunti P6, Boonmee S6, Dayarathne MC6, Li WJ6, Thambugala KM6, Perera RH 6, Daranagama DA6,13, Norphanphoun C6, Konta S6, Dong W6,7, Ertz D8,9, Phillips AJL10, McKenzie EHC11, Vinit K6,7, Ariyawansa HA12, Jones EBG7, Mortimer PE2, Xu JC2,3, Promputtha I1 1 Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand 2 Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming 650201, China 3 World Agro Forestry Centre, East and Central Asia, 132 Lanhei Road, Kunming 650201, Yunnan Province, People’s Republic of China 4 Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China 5 Shenzhen Key Laboratory of Microbial Genetic Engineering, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China 6 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 7 Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand 8 Department Research (BT), Botanic Garden Meise, Nieuwelaan 38, BE-1860 Meise, Belgium 9 Direction Générale de l'Enseignement non obligatoire et de la Recherche scientifique, Fédération Wallonie-Bruxelles, Rue A. -
Wyre Forest Oak Fogging Project Wyre Forest Study Group
Wyre Forest Study Group Wyre Forest Oak Fogging Project ED. RosemarY Winnall Natural England Tree 2 Tree 3 Tree 1 Fogging tree 3 Katrina Dainton Introductory Notes by Mick Blythe The samples collected were excellent, due to both the success of the operation and the nature of the oak In the summer of 2015 Katy Dainton and Alice James tree which had a number of exciting dead and rotten of Natural England sampled the canopy of three oak branches low down in the canopy. trees in the Wyre Forest using the fogging technique. In this technique a powered fogger is used to blow a Tree 2 was a 100 year old oak tree in the PAWS fog of insecticide up through the canopy of the tree section of Longdon Wood, SO75141 77757, sampled and the dead or stunned arthropods are collected in on 24/06/2015. The understorey was ankle to knee funnels or on tarpaulins set out on the ground below. length bracken and bramble. The same method was employed except that the tarpaulins were set out at Tree 1, an 80-100 year old oak tree with no woody 5:00 a.m. on the morning of the fogging. The fogging understorey at SO76182 74811 was sampled on was carried out at 5:40 as Tree 1. 16/06/2015. The fogger used was a PulsFOG K-10-SP portable thermal fogger and the insecticide a 10% This experiment was less successful. The insecticidal solution of Permethrin. 15 tarpaulins were set out fog would not rise higher than the lower third of the beneath the chosen tree the day before. -
An Evolving Phylogenetically Based Taxonomy of Lichens and Allied Fungi
Opuscula Philolichenum, 11: 4-10. 2012. *pdf available online 3January2012 via (http://sweetgum.nybg.org/philolichenum/) An evolving phylogenetically based taxonomy of lichens and allied fungi 1 BRENDAN P. HODKINSON ABSTRACT. – A taxonomic scheme for lichens and allied fungi that synthesizes scientific knowledge from a variety of sources is presented. The system put forth here is intended both (1) to provide a skeletal outline of the lichens and allied fungi that can be used as a provisional filing and databasing scheme by lichen herbarium/data managers and (2) to announce the online presence of an official taxonomy that will define the scope of the newly formed International Committee for the Nomenclature of Lichens and Allied Fungi (ICNLAF). The online version of the taxonomy presented here will continue to evolve along with our understanding of the organisms. Additionally, the subfamily Fissurinoideae Rivas Plata, Lücking and Lumbsch is elevated to the rank of family as Fissurinaceae. KEYWORDS. – higher-level taxonomy, lichen-forming fungi, lichenized fungi, phylogeny INTRODUCTION Traditionally, lichen herbaria have been arranged alphabetically, a scheme that stands in stark contrast to the phylogenetic scheme used by nearly all vascular plant herbaria. The justification typically given for this practice is that lichen taxonomy is too unstable to establish a reasonable system of classification. However, recent leaps forward in our understanding of the higher-level classification of fungi, driven primarily by the NSF-funded Assembling the Fungal Tree of Life (AFToL) project (Lutzoni et al. 2004), have caused the taxonomy of lichen-forming and allied fungi to increase significantly in stability. This is especially true within the class Lecanoromycetes, the main group of lichen-forming fungi (Miadlikowska et al. -
The Great Bradley Estate
The Great Bradley Estate Withypool A sportsman’s paradise on Exmoor The Great Bradley Estate, Withypool, Somerset TA24 7RS Withypool 2 miles, Dulverton 7 miles, Taunton 28 miles, Tiverton Parkway 29 miles Exeter Airport 56 miles, London 180 miles Features: Principal house with five en suite bedrooms and indoor swimming pool | Two cottages | Shoot lodge | Stable yard Established high pheasant shoot, fishing and horse training facilities including a six furlong all weather gallop In all 364 acres (147 ha) Situation Great Bradley occupies a fantastic south facing position with wonderful views over the expansive Exmoor countryside and the Barle valley. It is surrounded by it’s own land, which provides useful paddocks and attractive mature woodland including three Sites of Special Scientific Interest (SSSIs). Much of the land is steep, running down into the Barle valley, so it is ideal for the private but renowned pheasant shoot. Great Bradley sits in a very private position, near the centre of the estate. It has easy access to the small village of Withypool, about 2 miles away which offers everyday facilities and an excellent pub. Dulverton is about 7 miles to the south east and has more amenities and specialist shopping. Slightly further afield Tiverton and Taunton have supermarkets and more comprehensive facilities including leisure and recreation. Although Great Bradley is in the heart of Exmoor National Park, the M5 motorway can be accessed at Taunton (28 miles) or Tiverton (Junction 27). From Taunton the fastest mainline trains take about 1 hour 45 minutes to London Paddington. Exmoor National Park The National Park, which was designated in 1954, provides access for riding and walking over many thousands of acres of open moorland and its historic coastline, all directly accessible from the property. -
One Hundred New Species of Lichenized Fungi: a Signature of Undiscovered Global Diversity
Phytotaxa 18: 1–127 (2011) ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ Monograph PHYTOTAXA Copyright © 2011 Magnolia Press ISSN 1179-3163 (online edition) PHYTOTAXA 18 One hundred new species of lichenized fungi: a signature of undiscovered global diversity H. THORSTEN LUMBSCH1*, TEUVO AHTI2, SUSANNE ALTERMANN3, GUILLERMO AMO DE PAZ4, ANDRÉ APTROOT5, ULF ARUP6, ALEJANDRINA BÁRCENAS PEÑA7, PAULINA A. BAWINGAN8, MICHEL N. BENATTI9, LUISA BETANCOURT10, CURTIS R. BJÖRK11, KANSRI BOONPRAGOB12, MAARTEN BRAND13, FRANK BUNGARTZ14, MARCELA E. S. CÁCERES15, MEHTMET CANDAN16, JOSÉ LUIS CHAVES17, PHILIPPE CLERC18, RALPH COMMON19, BRIAN J. COPPINS20, ANA CRESPO4, MANUELA DAL-FORNO21, PRADEEP K. DIVAKAR4, MELIZAR V. DUYA22, JOHN A. ELIX23, ARVE ELVEBAKK24, JOHNATHON D. FANKHAUSER25, EDIT FARKAS26, LIDIA ITATÍ FERRARO27, EBERHARD FISCHER28, DAVID J. GALLOWAY29, ESTER GAYA30, MIREIA GIRALT31, TREVOR GOWARD32, MARTIN GRUBE33, JOSEF HAFELLNER33, JESÚS E. HERNÁNDEZ M.34, MARÍA DE LOS ANGELES HERRERA CAMPOS7, KLAUS KALB35, INGVAR KÄRNEFELT6, GINTARAS KANTVILAS36, DOROTHEE KILLMANN28, PAUL KIRIKA37, KERRY KNUDSEN38, HARALD KOMPOSCH39, SERGEY KONDRATYUK40, JAMES D. LAWREY21, ARMIN MANGOLD41, MARCELO P. MARCELLI9, BRUCE MCCUNE42, MARIA INES MESSUTI43, ANDREA MICHLIG27, RICARDO MIRANDA GONZÁLEZ7, BIBIANA MONCADA10, ALIFERETI NAIKATINI44, MATTHEW P. NELSEN1, 45, DAG O. ØVSTEDAL46, ZDENEK PALICE47, KHWANRUAN PAPONG48, SITTIPORN PARNMEN12, SERGIO PÉREZ-ORTEGA4, CHRISTIAN PRINTZEN49, VÍCTOR J. RICO4, EIMY RIVAS PLATA1, 50, JAVIER ROBAYO51, DANIA ROSABAL52, ULRIKE RUPRECHT53, NORIS SALAZAR ALLEN54, LEOPOLDO SANCHO4, LUCIANA SANTOS DE JESUS15, TAMIRES SANTOS VIEIRA15, MATTHIAS SCHULTZ55, MARK R. D. SEAWARD56, EMMANUËL SÉRUSIAUX57, IMKE SCHMITT58, HARRIE J. M. SIPMAN59, MOHAMMAD SOHRABI 2, 60, ULRIK SØCHTING61, MAJBRIT ZEUTHEN SØGAARD61, LAURENS B. SPARRIUS62, ADRIANO SPIELMANN63, TOBY SPRIBILLE33, JUTARAT SUTJARITTURAKAN64, ACHRA THAMMATHAWORN65, ARNE THELL6, GÖRAN THOR66, HOLGER THÜS67, EINAR TIMDAL68, CAMILLE TRUONG18, ROMAN TÜRK69, LOENGRIN UMAÑA TENORIO17, DALIP K. -
Habitats Regulations Assessment for the Preferred Strategy
THE WEST SOMERSET LOCAL PLAN 2012 TO 2032 DRAFT PREFERRED STRATEGY HABITAT REGULATIONS ASSESSMENT January 2012 This report was prepared by Somerset County Council on behalf of the Exmoor National Park Authority, as the 'competent authority' under the Conservation of Habitats and Species Regulations 2010. Copyright The maps in this report are reproduced from Ordnance Survey material with the permission of Ordnance Survey on behalf of the Controller of Her Majesty’s Stationery Office. © Crown copyright. Unauthorised reproduction infringes Crown copyright and may lead to prosecution or civil proceedings. (Somerset County Council)(100038382)(2011) 2 Contents 1. Introduction ................................................................................................................. 4 2. Screening Exercise ..................................................................................................... 6 3. Characteristics and Description of the Natura 2000 Sites ........................................... 8 Introduction .................................................................................................................. 8 Identification of Natura 2000 sites................................................................................ 8 Ecological Zones of Influence .................................................................................... 11 Description and Characterisation of Natura 2000 Sites ............................................. 11 4. Potential Impacts of the Plan on Ecology ................................................................. -
JNCC Coastal Directories Project Team
Coasts and seas of the United Kingdom Region 11 The Western Approaches: Falmouth Bay to Kenfig edited by J.H. Barne, C.F. Robson, S.S. Kaznowska, J.P. Doody, N.C. Davidson & A.L. Buck Joint Nature Conservation Committee Monkstone House, City Road Peterborough PE1 1JY UK ©JNCC 1996 This volume has been produced by the Coastal Directories Project of the JNCC on behalf of the project Steering Group and supported by WWF-UK. JNCC Coastal Directories Project Team Project directors Dr J.P. Doody, Dr N.C. Davidson Project management and co-ordination J.H. Barne, C.F. Robson Editing and publication S.S. Kaznowska, J.C. Brooksbank, A.L. Buck Administration & editorial assistance C.A. Smith, R. Keddie, J. Plaza, S. Palasiuk, N.M. Stevenson The project receives guidance from a Steering Group which has more than 200 members. More detailed information and advice came from the members of the Core Steering Group, which is composed as follows: Dr J.M. Baxter Scottish Natural Heritage R.J. Bleakley Department of the Environment, Northern Ireland R. Bradley The Association of Sea Fisheries Committees of England and Wales Dr J.P. Doody Joint Nature Conservation Committee B. Empson Environment Agency Dr K. Hiscock Joint Nature Conservation Committee C. Gilbert Kent County Council & National Coasts and Estuaries Advisory Group Prof. S.J. Lockwood MAFF Directorate of Fisheries Research C.R. Macduff-Duncan Esso UK (on behalf of the UK Offshore Operators Association) Dr D.J. Murison Scottish Office Agriculture, Environment & Fisheries Department Dr H.J. Prosser Welsh Office Dr J.S. -
Volume 2, Chapter 12-5: Terrestrial Insects: Hemimetabola-Notoptera
Glime, J. M. 2017. Terrestrial Insects: Hemimetabola – Notoptera and Psocoptera. Chapter 12-5. In: Glime, J. M. Bryophyte Ecology. 12-5-1 Volume 2. Interactions. Ebook sponsored by Michigan Technological University and the International Association of Bryologists. eBook last updated 19 July 2020 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology2/>. CHAPTER 12-5 TERRESTRIAL INSECTS: HEMIMETABOLA – NOTOPTERA AND PSOCOPTERA TABLE OF CONTENTS NOTOPTERA .................................................................................................................................................. 12-5-2 Grylloblattodea – Ice Crawlers ................................................................................................................. 12-5-3 Grylloblattidae – Ice Crawlers ........................................................................................................... 12-5-3 Galloisiana ................................................................................................................................. 12-5-3 Grylloblatta ................................................................................................................................ 12-5-3 Grylloblattella ............................................................................................................................ 12-5-4 PSOCOPTERA – Booklice, Barklice, Barkflies .............................................................................................. 12-5-4 Summary ......................................................................................................................................................... -
New Forest Remembers WWII Project Oral History Team: Transcription Document
Mr Owen Page 1 10/01/2019 New Forest Remembers WWII Project Oral History Team: Transcription Document Contributor’s name Donald William Bond Name code DWB Interviewer’s name Sue Jackson Code number 007 Audio Typist name Dru Owen Transcription Date 17 - 19/10/2013 Transcription file name DWB – Donald William Bond - OH Transcription.doc Web Pages: Oral History article: https://nfknowledge.org/contributions/memories-of-lyndhurst-and-denny-sawmill/#map=10/- 1.53/50.86/0/22:0:0.6|36:1:1|37:1:1 Project information: www.newforestnpa.gov.uk/wwii File name DWB 007 0001M0.WAV Interview date:24/02/13 [00:00:00] Could I just ask you to tell me your name, and when and where you were born? Donald William Bond and I was born in Lyndhurst. Possibly at the Fenwick hospital. When were you born? The ninth of the tenth, twenty eight [09/10/1928]. [00:00:20] Were you in Lyndhurst at the start of the war? Yes. So you were about seventeen? At the start of the war I war eleven actually, when the war broke out on September the third. © 2014 New Forest National Park Authority Lymington Town Hall, Avenue Road, Lymington, Hampshire SO41 9ZG Email [email protected] www.newforestnpa.gov.uk/wwii VAT Reg No. 871 9343 00 CHAIRMAN JULIAN JOHNSON CHIEF EXECUTIVE ALISON BARNES Mr Owen Page 2 10/01/2019 And what were you doing at that stage, were you at school? I was at school, Emery Down school. [00:00:42] Do you remember much about school life, school days? A lot, yeah I do.