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Asian Herpetological Research 2012, 3(3): 219–226 DOI: 10.3724/SP.J.1245.2011.00219

Evaluation of the Validity of the Ratsnake Subspecies carinata deqenensis (Serpent: )

Peng GUO1*,**, Qin LIU1*, Edward A. MYERS2, 3, Shaoying LIU4, Yan XU1, 5, Yang LIU4 and Yuezhao WANG6

1 College of Life Sciences and Food Engineering, Yibin University, Yibin 644007, Sichuan, China 2 Department of Biology, Graduate School and University Center, City University of New York, 365 5th Ave., New York, NY 10016, USA 3 Department of Biology, College of Staten Island, City University of New York, 2800 Victory Blvd., Staten Island, NY 10314, USA 4 Sichuan Academy of Forestry, Chengdu 610066, Sichuan, China 5 Chengdu University of Technology, Chengdu 610050, Sichuan, China 6 Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, Sichuan, China

Abstract Based on morphological character comparisons and molecular phylogenetic reconstruction, we assessed the validity of the ratsnake subspecies deqenensis. Phylogenetic relationships inferred from fragments of two mitochondrial genes (ND2 and ND4) and one nuclear gene (c-mos) revealed a well-supported and minimally divergent sister relationship between putative E. c. deqenensis and E. c. carinata. Morphological comparisons indicated that all diagnostic characters proposed in the original description of E. c. deqenensis are unable to separate this taxon from E. c. carinata. On the basis of these preliminary investigations, we provisionally suggest that E. c. deqenensis is not a valid subspecies, and should henceforth be treated as a synonym of E. c. carinata.

Keywords , , morphology, hemipenis, molecular phylogeny, Hengduan Mountains

1. Introduction Elaphe carinata was originally described as Phyllophis carinata based on a single specimen from China (Günther, The King ratsnake, Elaphe carinata (Günther, 1864), 1864). In addition to the nominate form, another two belongs to the family Colubridae (Pyron et al., 2011), subspecies E. c. deqenensis and E. c. yonaguniensis were and ranges through Vietnam, Japan and China. In China, recognized (Uetz, 2011). E. c. yonaguniensis is endemic this is widely distributed across a large region to the Ryukyu Islands, Japan and Taiwan, China. The from western Yunnan (Gongshan County.) in the west to subspecies E. c. deqenensis was described from Deqin Shanghai in the east, and from northern Guangdong in County, Yunnan, China based on several specimens (Yang the south to Hebei in the north (Zhao, 2006). E. carinata and Su, 1984). The taxon E. c. deqenensis is restricted to is a large snake with adults ranging from 1500 mm to a small area in Yunnan (Deqin and Weixi counties) and 2000 mm in total length (Zhao et al., 1998). This snake is distinguished from E. c. carinata by body coloration, occupies a variety of at elevations ranging pattern, morphometrics and scalation (Yang and Su, between 100 and 2500 m above sea level (Zhao, 2006). 1984; Yang and Rao, 2008). The validity of this taxon is currently disputed, with the arrangement accepted by * Both authors contributed equally to this work. Utiger et al. (2002) and Uetz (2011), but not by Zhao et al. ** Corresponding author: Prof. Peng GUO from the College of Life (1998) and Zhao (2006). Despite these disagreements, no Science and Food Engineering, Yibin University, Sichuan, China, with his research focusing on herpetology, particularly molecular systematics, morphological or molecular study has been conducted to morphology evolution, biogeography and population genetics of Asian examine the systematics of this taxon. . E-mail: [email protected] Three specimens of E. carinata were collected from Received: 16 February 2012 Accepted: 8 August 2012 the type locality of E. c. deqenensis (Deqin County, 220 Asian Herpetological Research Vol. 3

Yunnan) during fieldwork in 2010 (Figure 1). These obtained from the original description (Yang and Su, specimens have allowed investigation of the status of this 1984) and from Yang and Rao (2008). Comparative data subspecies on the basis of morphological comparisons from specimens from other E. carinata populations were and molecular phylogenetic reconstruction. obtained from published work (Wu et al., 1985; Huang, 1990; Fan et al., 1998; Zhao et al., 1998; Yang and Rao, 2008). 2.2 Molecular phylogenetic reconstruction Tissue samples from two of the three putative E. c. deqenensis specimens were used for DNA sequence generation, and comparative sequences from seven other species of Elaphe (sensu stricto) (Burbrink and Lawson, 2007) were obtained from GenBank (Table 1). Based on previous molecular studies examining the relationships of ratsnakes, several closely-related representatives of the subfamily Colubrinae were chosen as outgroup taxa (Burbrink and Lawson, 2007) (Table 1). Figure 1 Sample locality of E. c. deqenensis (indicated by a red Genomic DNA was extracted from 85% ethanol- dot). preserved tissues using standard proteinase K and phenol- chloroform protocols (Sambrook and Russell, 2002). Two 2. Materials and Methods mitochondrial protein-coding gene fragments NADH dehydrogenase subunit 4 (ND4), NADH dehydrogenase 2.1 Morphological comparisons Thirty morphological subunit 2 (ND2), and a fragment of one nuclear protein- characters related to scalation, and body dimensions were coding gene (the oocyte maturation factor c-mos) recorded for the three specimens (YBU 10004–10006; were amplified following Arévalo et al. (1994) (ND4), two adult males and one juvenile male) (Appendix). Burbrink and Lawson (2007) (ND2) and Slowinski Measurements of body and tail length were taken with and Lawson (2002) (c-mos). These amplified loci were a ruler to the nearest 1 cm. Ventral scale counts were sequenced using an ABI 3730 Genetic Analyzer (Applied recorded following Dowling (1951), while the preparation Biosystems) following the manufacturer’s protocols. and description of hemipenes followed Dowling and Novel sequences generated in the present study are Savage (1960). The type specimens of E. c. deqenensis deposited in GenBank (Accession Nos. JN799413– were unavailable for examination as they could not be JN799418) (Table 1). found in the museum in which they were deposited, DNA sequences were aligned using the program Mega therefore morphological data for these specimens were 4.0 with default parameters (Tamura et al., 2007; Kumar

Table 1 Specimens used in the molecular phylogenetic analysis.

Taxon Voucher No. Origin GenBank accession No. (ND2/ND4/c-mos) DQ902210/DQ902283/DQ902062 E. carinata carinata LSUMZ 37012 China DQ902211/DQ902284/DQ902063 E. carinata deqenensis YBU 10004/GP 1271 Yunnan, China JN799417/JN799413/JN799415 E. carinata deqenensis YBU 10005/GP 1272 Yunnan, China JN799418/JN799414/JN799416 E. climacophora CAS 163993 Japan DQ902212/DQ902285/DQ902064 E. dione LSUMZ 45799 Russia DQ902214/DQ902287/DQ902066 E. quadrivirgata Japan DQ902228/DQ902300/DQ902078 E. quatuorlineata LSUMZ 40626 Turkey AY487028/AY487067/AY486955 E. schrenki DQ902233/DQ902302/DQ902082 vulpinus (O) CAS 184362 Ohio, USA DQ902238/DQ902306/DQ902089 Rhinechis scalaris (O) LSUMZ 37393 Spain AY487029/AY487068/AY486956 Stilosoma extenuatum (O) LSUMZ 40124 Florida, USA DQ902245/AF138776/DQ902093 situlus (O) CAS 175031 Unknown DQ902234/DQ902303/DQ902083

YBU: Yibin University; CAS: California Academy of Sciences, San Francisco; LSUMZ: Louisiana State Museum of Natural Science; GP: Authors’ catalogue numbers. Outgroups are followed by (O), and sequences generated in this study are shown in bold. No. 3 Peng GUO et al. Validity of Elaphe carinata deqenensis 221 et al., 2008). Protein-coding fragments were translated 4.67 and 3.86. Other characteristics were: Supralabials 8, into amino acid sequences using Mega 4.0 to check for with 3 being anterior to the orbit, 2 entering the orbit, and SUHPDWXUHVWRSFRGRQVZKLFKPD\LQGLFDWHDPSOL¿FDWLRQ SRVWHULRUWRWKHRUELWLQIUDODELDOVRUZLWKWKH¿UVW of pseudogenes (Zhang and Hewitt, 1996). Average SDLULQFRQWDFWZLWKRQHDQRWKHUWKH¿UVWWR¿IWKWRXFKLQJ divergence estimates between species and subspecies WKHDQWHULRUFKLQVKLHOGVDQGWKH¿IWKDQGVL[WKWRXFKLQJ were calculated from each locus separately as well as the posterior chin shields; preoculars 2, postoculars 2, from all three loci combined Mega 4.0 (Tamura et al., temporals 6 or 7, loreal 1; both males having 23–23–17 2007; Kumar et al., 2008). dorsal scale rows, strongly keeled with the exception of Bayesian inference (BI) and maximum parsimony the outer row on each side; ventral scales 213 + 2 and 218 (MP) were used to reconstruct phylogenetic relationships. + 2, subcaudals 71 and 88 pairs, anal plate divided. The For the Bayesian analysis, sequence data were partitioned coloration of both adult males is similar. Scales on the by locus, resulting in three partitions (c-mos, ND4 and top of the head are rich brown, paling on the sides. This 1' 7KHVLPSOHVWEHVW¿WPRGHORIVHTXHQFHHYROXWLRQ color extends onto the nape but rapidly becomes darker (Posada and Crandall, 1998; Posada and Buckley, 2004) and less rich, and most body scales are a dull brown. The was inferred under the Akaike Information Criterion interstitial skin is black, with numerous irregular cream (AIC) using MrModeltest v. 2.2 (Nylander, 2004). The cross-bars. This cream color is also present on the bases Bayesian analysis was performed using MrBayes v. of dorsal scales that coincide with the bars. The bars 3.1.2 (Huelsenbeck and Ronquist, 2001; Ronquist and IDGHSRVWHULRUO\WRVFDWWHUHGFUHDPÀHFNVDQGGLVDSSHDU Huelsenbeck, 2003), with three independent runs each altogether towards the vent. The underside of the head consisting of four Markov chains (three heated chains is yellow-white. Ventrals are basically white with and a single cold chain) starting from random trees, and innumerable tiny black speckles, which tend to be dense applying the appropriate models of sequence evolution. posteriorly (Figure 3). Each analysis was run for a total of 5 × 106 generations and sampled every 1000 generations. Stationarity was confirmed by plotting the likelihood against generation in the program Tracer v. 1.4 (Drummond and Rambaut, 2007). MP trees were generated from unweighted characters using PAUP* 4.0b10 (Swofford, 2003), applying a heuristic search with 1000 random sequence addition replicates and tree bisection-reconnection (TBR) branch swapping. Support values for clades were obtained by bootstrapping (BS; Felsenstein, 1985) using 1000 bootstrap pseudoreplicates.

3. Results

3.1 Description of morphology The everted hemipenes are single and bulbous, each with a simple sulcus that Figure 2 Sulcate (A) and asulcate (B) views of a hemipenis of E. extends to the top of the organ. The basal 1/5 of each carinata (YBU 10005) from Deqin County, Yunnan, China. hemipenis is smooth, followed by an approximately equal segment covered in papillae. The top 1/5 of the organ is The juvenile specimen measures 350 mm SVL and nude and smooth, and the middle 2/5 is calyculate, with 95 mm TL, with a SVL/TL ratio of 3.68. Ventral scales the edges of each calyce ornamented with small spines are 212 and subcaudals 99. The dorsum is light tan with (Figure 2). four longitudinal stripes, two dorsolateral and two lateral, The following descriptions are made based on two which originate immediately behind the head. The lateral adult males collected from Deqin County, Yunnan (Figure stripes terminate around the position of the cloaca, while 1). These are large, stout-bodied . The the dorsolateral stripes extend to the tip of the tail. Dark snout-vent lengths (SVL) of the two specimens examined EURZQÀHFNVDUHVFDWWHUHGVSDUVHO\DQGLUUHJXODUO\RQWKH were 1450 mm and 1080 mm, with respective tail lengths dorsum, with density decreasing caudad, and disappearing (TL) of 310 mm and 280 mm, giving SVL/TL ratios of altogether approximately 2/3 of the way down the body. 222 Asian Herpetological Research Vol. 3

Ventrals are consistent with the dorsal scales in coloration, E\0U0RGHOWHVWZHUHDVIROORZV*75,īIRU1' but scattered black dots are present on both sides of the +.<,īIRU1'DQG+.<IRUFPRV7KHVHPRGHOV ventrals (Figure 4). were implemented in our analyses, and the resultant BI 50% majority-rule consensus tree is shown in Figure 5. All seven representatives of Elaphe were monophyletic, and the two individuals representing E. c. deqenensis were included with E. c. carinata in a well-supported clade (100% PP: Figure 5).

Figure 3 Dorsal view of an adult male E. carinata (YBU 10005) from Deqin County, Yunnan, China.

Figure 5 Bayesian 50% majority-rule consensus tree inferred from the combined ND2, ND4 and c-mos data. Node support is provided in the format: Bayesian posterior probabilities / MP bootstrap values.

The parsimony analysis produced a single tree with a length = 504, CI = 0.58, RI = 0.51, and RC = 0.30. The MP tree showed consistently high support values with BI Figure 4 Dorsal view of the juvenile E. carinata (YBU 10006) tree in the clade including all putative species of Elaphe from Deqin County, Yunnan, China. (99% BS) and the clade including the three specimens of E. carinata (100% BS) (Figure 5). The disagreements 3.1 Molecular phylogeny The final molecular dataset were indicated in several nodes which are very low in consisted of 2292 DNA base pairs (bp): 1032 bp ND2, support indices in MP tree. Bootstrap values are reported 693 bp ND4, and 567 bp c-mos. 701 bp (30.6%) and on the Bayesian 50% majority-rule consensus tree in 614 bp (26.8%) were variable, and 486 bp (21.2%) and Figure 5. 356 bp (15.5%) were parsimony-informative when the RXWJURXSVZHUHLQFOXGHGDQGH[FOXGHG:HDUHFRQ¿GHQW 4. Discussion that pseudogenes were not amplified as no insertions, deletions, or stop codons were detected in the protein- 7UDGLWLRQDOO\VXEVSHFLHVKDYHEHHQLGHQWL¿HGRQWKHEDVLV coding genes (Zhang and Hewitt, 1996). Uncorrected of morphological characters. However, morphological sequence divergence from interspecific comparisons variation may result from phenotypic plasticity and (excluding outgroups) ranged between 12.4%–17.9% for adaptation to local environments, which may mislead our ND2, 12.1%–17.3% for ND4, and 9.1%–12.2% for the understanding of evolutionary relationships (Herrmann FRPELQHGGDWDVHW,QWUDVSHFL¿FVHTXHQFHGLYHUJHQFHVIRU et al., 2004). DNA sequence data are, thus, commonly E. carinata were much lower, ranging between 1.9%– used for phylogenetic reconstruction, as is the case in this 2.8% for ND2, ND4 and the combined dataset (Table 2). study. Both methods of phylogenetic tree reconstruction The optimal models of sequence evolution identified showed that the specimens from Deqin currently No. 3 Peng GUO et al. Validity of Elaphe carinata deqenensis 223

Table 2$YHUDJHLQWHUVSHFL¿FDQGLQWUDVSHFL¿FGLYHUJHQFHHVWLPDWHV 7DPXUD1HLGLVWDQFHVZLWKJDPPDFRUUHFWLRQ $ERYHGLDJRQDO Distances calculated from ND2/ND4; Below diagonal: Distances calculated from the combined data set (ND2, ND4 and c-mos). Comparisons between E. c. deqenensis and E. c. carinata are shown in bold. The distances calculated from c-mos are not included due to their low variation.

c. deqenensis bimaculata c. carinata climacophora dione quadrivirgata quatuorlineata schrenckii c. deqenensis 13.9/15.1 2.8/1.9 17.2/14.9 15.4/17.2 16.7/14.1 14.8/15.7 15.0/14.9 bimaculata 10.8 14.5/14.1 16.9/14.7 12.4/12.4 15.1/15.7 12.9/13.7 14.5/16.2 c. carinata 2.0 10.7 17.5/13.6 15.0/16.7 18.0/12.1 16.3/14.2 16.4/14.2 climacophora 12.1 11.7 11.7 17.9/15.1 16.5/14.0 15.1/14.2 17.0/15.0 dione 12.1 9.1 11.7 12.2 15.2/15.0 14.6/15.4 14.9/17.3 quadrivirgata 11.5 11.3 11.4 11.4 11.2 14.9/15.7 13.4/14.9 quatuorlineata 11.2 9.7 11.3 10.8 10.9 11.1 13.5/16.3 schrenckii 11.1 11.2 11.4 11.8 11.3 10.3 10.6 recognized as E. c. deqenensis form a well-supported bold are direct quotations from these two papers. clade with E. c. carinata, and this clade is nested within Lower ratio of SVL to TL: After the original description the genus Elaphe (Figure 5). Based on our small sample, (Yang and Su, 1984), Yang and Rao (2008) added the ratio the genetic divergence between the two subspecies of of SVL to TL as a diagnostic character for E. c. deqenensis. Elaphe carinata is approximately one quarter that between Yang and Rao (2008) proposed that in deqenensis this ratio the Elaphe species included in this study (Table 2). When is lower (3.1 in males and 2.8 in a single female) than in E. compared with other studies of colubroid snakes, the c. carinata (4.36 in males and 4.84 in females). However, genetic divergence within E. carianta is low (Guicking the ratios for the two male and one juvenile deqenensis et al., 2008; Guo et al., 2011). For example, for ND4, the examined in this study (ranging from 3.68 to 4.67) were LQWUDVSHFL¿FJHQHWLFGLYHUJHQFHRIProtobothrops jerdonii higher than those reported by Yang and Su (1984), and varies between 2.8%–4.7% (Guo et al., 2011), which is Yang and Rao (2008). In addition, some specimens much higher than that of E. carinataEXWWKHLQWHUVSHFL¿F belonging to E. c. carinata have lower ratios of SVL to divergence of Protobothrops ranges between 3.5%–13% TL. For example, a male from Guizhou has a ratio 3.17 (Liu et al., 2012), which is consistent with those of (Wu et al., 1985), and two females from Shanxi have ratios Elaphe. of 2.92 and 2.84 (Fan et al., 1998) (Table 3). Though our The hemipenes of E. c. deqenensis and E. c. carinata sampling is not sufficient to investigate the distribution appear to be morphologically similar based on the of this character in the two putative subspecies, it is clear descriptions of the specimens from Fujian, China by that it cannot serve as a diagnostic character for their Pope (1935) and the specimens from Hunan, China by separation. Zhang et al. (1984). However, morphological data from Ventral scales are less than 214: Yang and Su (1984), our putative E. c. deqenensis specimens do not fit with and Yang and Rao (2008) proposed that deqenensis has the meristic and morphometric characters proposed for fewer than 214 ventral scales (210.6 in males and 214 in subspecies delineation in E. carinata by Yang and Su a female), while E. c. carinata has more than 214. Based (1984), and Yang and Rao (2008). A detailed comparison on published data it appears that putative E. c. carinata of our results with those of Yang and Su (1984), and Yang specimens from Zhejiang, Sichuan, Guizhou, Shanxi, and Rao (2008) is presented below, where the phrases in Gansu and Guangxi often exhibit ventral scale counts

Table 3 Body measurements of E. carinata from China.

Locality Sex SVL (mm) TL (mm) SVL/TL References Deqin, Yunnan ƃƃ 850, 880 280, 320 2.75, 3.04 Yang and Rao (2008) Deqin, Yunnan ƃƃ 1450, 1080 310, 280 4.67, 3.86 This study Gongshan, Yunnan ƃƃ 1070, 1106 240, 260 4.25, 4.46 Yang and Rao (2008) Songtao, Guizhou ƃƃ 940–1560 238–436 3.17–4.67 Wu et al. (1985) Zhejiang ƃƃ 7 90–1430 195–356 3.83–4.50 Huang et al. (1990) Tengchong, Yunnan ƂƂ 1112–1540 229–327 4.64–5.07 Yang and Rao (2008) Songtao, Guizhou ƂƂ 934–1666 220–310 3.88–6.26 Wu et al. (1985) Zhejiang ƂƂ 820–1535 200–360 4.10–5.24 Huang et al. (1990) Shanxi ƂƂ 1022, 1010 350, 356 2.92, 2.84 Fan et al. (1998) Deqin, Yunnan J 350 95 3.68 This study 224 Asian Herpetological Research Vol. 3 of less than 214 (Table 4). We also found that one of our 2004; Vogel, 2006; Guo et al., 2009), Opisthotropis cheni putative deqenensis specimens (YBU 10005) had 218 (Li et al., 2010). Such variation has often formed the basis ventral scales. Additionally, the number of subcaudals for description of species and subspecies (e. g., Orlov in deqenensis varies between 71 and 94 (Yang and Rao, and Helfenberger, 1997, but see Burbrink et al., 2000). 2008; this study), which is within the range of variation However, comprehensive evolutionary investigations in E. c. carinata (69–99, though one specimen from (particularly those using molecular phylogenies) often Zhejiang had a count of 57; Table 4). do not support taxonomic arrangements based solely on Body scales at neck are 25: Yang and Su (1984) and coloration and pattern (Burbrink et al., 2000; Tillack et Yang and Rao (2008) proposed that deqenensis has 25 al., 2003; Guo et al., 2009). For example, Pantherophis rows of body scales on the neck, and they regarded this obsoletus was historically regarded as comprising up to as a diagnostic character for deqenensis. However, this eight subspecies defined primarily on the basis of adult character is considerably variable in most snakes (e. g., color and pattern. However, molecular phylogenies Protobothrops jerdonii, personal observation), thus it is coupled with detailed morphological analyses seldom used for taxon delimitation as it is of little use demonstrated that these subspecies did not represent in discriminating between snake species and subspecies distinct evolutionary lineages (Burbrink et al., 2000). Thus, (Zhao et al., 1998). Burbrink et al. (2000) proposed that it was dangerous to Different body coloration and pattern: The coloration recognize subspecies based on few characters, especially and patterning of our putative deqenensis specimens were those associated with color and pattern. consistent with the descriptions provided by Yang and Su Although the molecular results were not sufficient (1984), and Yang and Rao (2008), in which deqenensis to conclude whether the subspecies E. c. deqenensis lacks yellow coloration on the body, has narrow black was a valid evolutionary unit or not, the morphological cross-bands at the anterior of the body, and no reticulate comparison indicated that the putatively diagnostic pattern posteriorly or on the tail. E. carinata displays morphological characters could not be used to separate E. LQWUDVSHFL¿FFRORUDQGSDWWHUQSRO\PRUSKLVPWKDWDSSHDUV c. deqenensis from E. c. carinata. Thus, we provisionally to be associated with (Zhao et al., 1998; Zhao, suggest that the populations of E. carinata from 2006; personal observation) and with age. Intraspecific Deqin and Weixi counties of China do not represent variation in color and pattern in snakes can be extreme, distinct taxonomic entities, and should be regarded for example, in (Burbrink et al., as members of the typical race (E. c. carinata). More 2000), Himalayophis tibetanus (Gumprecht et al., 2004; extensive geographic sampling and sequences from Vogel, 2006), Protobothrops jerdonii (Gumprecht et al., additional unlinked genetic markers will be necessary to

Table 4 Ventral (Vs) and subcaudal (Sc) scale counts for E. carinata from China.

Locality Sex Vs Sc References Deqin, Yunnan ƃƃ 206–213 72–94 Yang and Rao (2008) Deqin, Yunnan ƃƃ 213, 218 71, 88 This study Gongshan, Yunnan ƃƃ 217–221 83 Yang and Rao (2008) Guizhou ƃƃ 194–228 81–103 Wu et al. (1985) Zhejiang ƃƃ 213–222 85–99 Huang et al. (1990) Guangxi ƃ 203 97 Zhao et al. (1998) Zhejiang ƃƃ 212–227 75–102 Zhao et al. (1998) Sichuan ƃƃ 208–218 87–93 Zhao et al. (1998) Shaanxi ƃ 214 73 Zhao et al. (1998) Deqin, Yunnan Ƃ 214 92 Yang and Rao (2008) Deqin, Yunnan J 212 92 This study Tengchong, Yunnan ƂƂ 218–224 74–83 Yang and Rao (2008) Guizhou ƂƂ 186–226 73–95 Wu et al. (1985) Zhejiang ƂƂ 216–220 57–92 Huang et al. (1990) Zhejiang ƂƂ 198–219 73–89 Zhao et al. (1998) Shanxi ƂƂ 208–209 84–86 Fan et al. (1998) Guangxi Ƃ 219 86 Zhao et al. (1998) Yizhang, Hunan Ƃ 220 69 Zhao et al. (1998) Sichuan ƂƂ 213–214 82–87 Zhao et al. (1998) Gansu ƂƂ 211 80–81 Zhao et al. (1998) No. 3 Peng GUO et al. Validity of Elaphe carinata deqenensis 225 comprehensively investigate the possible existence of Huang M. H., Jin Y. L., Cai C. M. 1990. Fauna of Zhejiang: cryptic taxa within the polymorphic E. carinata. Amphibia and Reptilia. Hangzhou: Zhejiang Science and Technology Publishing House (In Chinese) Acknowledgments This study was funded by the Huelsenbeck J. P., Ronquist F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics, 17: 754–755 National Natural Science Foundation of China (Grant Nos: Kumar S., Dudley J., Nei M., Tamura K. 2008. MEGA: A NSFC30670236, NSFC30970334, NSFC31071892), the biologist-centric software for evolutionary analysis of DNA and Program for New Century Excellent Talents in University, protein sequences. Brief in Bioinform, 9: 299–306 the Ministry of Education of China (NCET-08-0908), and Li C., Liu Q., Guo P. 2010. Expanded description of a Chinese the Sichuan Youth Sciences and Technology Foundation endemic snake Opisthotropis cheni (Serpentes: Colubridae: (08ZQ06-006). We thank R. Liao for his assistance in the Natricinae). Asian Herpetol Res, 1(1): 57–60 ¿HOG Liu Q., Myers E. A., Zhong G. H., Hu J., Zhao H., Guo P. 2012. Molecular evidence on the systematic position of the lance- headed pitviper Protobothrops maolanensis Yang et al., 2011. References Zootaxa, 3178: 57–62 Nylander J. A. A. 2004. MrModeltest v. 2. Program distributed by Arévalo E., Davis S. K., Sites J. W. 1994. Mitochondrial DNA the author. Evolutionary Biology Centre, Uppsala University sequence divergence and phylogenetic relationships among Orlov N. L., Helfenberger N. 1997. New mountain species of eight chromosome races of the Sceloporus grammicus complex Trimeresurus (Serpentes, Viperidae, Crotalinae) of the “green” (Phrynosomatidae) in central Mexico. Syst Biol, 43: 387–418 pit vipers group from the Himalayas. Rus J Herpetol, 4: 195–197 Burbrink F. T., Lawson R. 2007. How and when did Old World Pope C. H. 1935. The reptiles of China. Turtles, crocodilians, ratsnakes disperse into the New World? Mol Phylogenet Evol, snakes, lizards. Natural History of Central Asia, X. New York: 43: 173–189 American Museum of Natural History. Burbrink F. T. 2000. Systematics of the eastern ratsnake complex Posada D., Buckley T. R. 2004. Model selection and model (Elaphe obsoleta). Herpetol Monogr, 15: 1–53 averaging in phylogenetics: Advantages of the AIC and Bayesian Burbrink F. T., Lawson R., Slowinksi J. B. 2000. MtDNA approaches over likelihood ratio tests. Syst Bio, 53: 793–808 phylogeography of the North American (Elaphe Posada D., Crandall K. A. 1998. Modeltest: Testing the model of obsoleta): A critique of the subspecies concept. Evolution, 54: DNA substitution. Bioinformatics, 14: 817–818 2107–2118 Pyron R. A., Burbrink F. T., Colli G. R., de Oca A. N. M., Dowing H. G., Savage J. M. 1960. A guide to the snake hemipenis: Vitt L. J., Kuczynski C. A., Wiens J. J. 2011 The phylogeny A survey of basic structure and systematic characters. Zoologica, of advanced snakes (Colubroidea), with discovery of a new 45: 17–28 subfamily and comparison of support methods for likelihood Dowling H. G. 1951. A proposed system for counting ventrals in trees. Mol Phylogenet Evol, 58: 329–342 snakes. Br J Herpetol, 1: 97–99 Rambaut A., Drummond A. J. 2007. Tracer v. 1.4. Available from Fan L. S., Guo C. W., Liu H. J. 1998. Amphibians and Reptiles of http://evolve.zoo.ox.ac.uk Shanxi Province. Beijing: China Forestry Press (In Chinese) Ronquist F., Huelsenbeck J. P. 2003. MRBAYES 3: Bayesian Felsenstein J.&RQ¿GHQFHOLPLWVRQSK\ORJHQLHV$QDSSURDFK phylogenetic inference under mixed models. Bioinformatics, 19: using the bootstrap. Evolution, 39: 783–791 1572–1574 Guicking D., Joger U., Wink M. 2008. Molecular phylogeography Sambrook J., Russell D. W. 2002. Molecular Cloning: A of the viperine snake Natrix maura (Serpentes: Colubridae): Laboratory Manual (3rd Ed). New York: Cold Spring Harbor Evidence for strong intraspecific differentiation. Org Divers Laboratory Press Evol, 8: 130–145 Slowinski J. B., Lawson R. 2002. Snake phylogeny: Evidence Gumprecht A., Tillack F., Orlov N. L., Captain A., Ryabow S. from nuclear and mitochondrial genes. Mol Phylogenet Evol, 24: 2004. Asian pitvipers. Berlin: Geitje Books 194–202 Günther A. 1864. The Reptiles of British India. London: Taylor and Swofford D. L. 2003. PAUP* bv10: Phylogenetic analysis using Francis parsimony (* and other methods) v. 4. Sunderland, MA: Sinauer Guo P., Liu Q., Li C., Chen X., Jiang K., Wang Y. Z., Malhotra Assoc. A. 2011. Molecular phylogeography of the Jerdon’s pit viper Tamura K., Dudley J., Nei M., Kumar S. 2007. MEGA 4: (Protobothrops jerdonii): importance of the uplifting of the Molecular evolutionary genetics analysis (MEGA) software v. Tibetan Plateau. J Biogeogr, 38: 2326–2336 4.0. Mol. Bio Evol, 24: 1596–1599 Guo P., Malhotra A., Li C., Creer S., Pook C. E., Wen T. 2009. Tillack F., Lorenz M., Orlov N. L., Helfenberger N., Shah Systematics of the Protobothrops jerdonii complex (Serpentes, K. B., Eckert W. 2003. Sha´s Grubenotter Trimeresurus Viperidae, Crotalinae) inferred from morphometric data and karanshahi Orlov and Helfenberger, 1997 - ein Juniorsynonym molecular phylogeny. Herpetol J, 19: 85–96 von Trimeresurus tibetanus Huang, 1982 (Serpentes: Viperidae: Herrmann H. W., Ziegler T., Malhotra A., Thorpe R. S., Crotalinae), mit Angaben zur Verbreitung, Biologie und der Parkinson C. L. 2004. Redescription and systematics of Vorstellung neuer Farbvarianten asu Zent. Sauria, 25: 3–15 Trimeresurus cornutus (Serpentes: Viperidae) based on Uetz P. The database (http://reptile-database.reptarium.cz). morphology and molecular data. Herpetologica, 60: 211–221 Accessed in December 2011 226 Asian Herpetological Research Vol. 3

Utiger U., Helfenberger N., Schätti B., Schmidt C., Ruf M., Zool Res, 5: 159–163 (In Chinese) Ziswiler V. 2002. Molecular systematics and phylogeny of Old Zhang D. X., Hewitt G. M. 1996. Nuclear integrations: Challenges World and New World ratsnakes, Elaphe Auct., and related for mitochondrial DNA markers. Trends Ecol Evol, 11: 247–251 genera (Reptilia, , Colubridae). Rus J Herpetol, 9: Zhang F. J., Hu S. Q., Zhao E. M. 1984. Comparative studies 105–124 and phylogenetic discussions on hemipenial morphology of the Vogel G. 2006. Venomous Snakes of Asia. Frankurt: Chimaira Chinese Colubrinae (Colubridae). Acta Herpetol Sin, 3: 23–44 Wu L., Li D. J., Liu J. S. 1985. The Retile Fauna of Guizhou. (In Chinese) Guiyang: Guizhou People’s Press (In Chinese) Zhao E. M. 2006. Snakes of China. Hefei: Anhui Sciences and Yang D. T., Rao D. Q. 2008. Amphibia and Reptilia of Yunnan. Technology Publishing House (In Chinese) Kunming: Yunnan Sciences and Technology Press (In Chinese) Zhao E. M., Huang M. H., Zong Y. 1998. Fauna Sinica: Reptilia, Yang D. T., Su C. Y. 1984. A preliminary study on the subspecies Vol. 3, Squamata, Serpentes. Beijing: Science Press (In Chinese) differentiation of Elaphe carinata (Serpentiformes: Colubridae).

Appendix from the head), which is the ventral scale to which the scale reduction traces diagonally. Before analysis, the VS position was Morphological characters used in the morphological analysis, and transformed into the percentage of the total number of ventral scales their abbreviations are provided below: (%VS), to control for variation. (Sbucaudal scale position: SC). VS21to19: Ventral scale position of the reduction from 21 to 19 1. Scalation scale rows. BSCK: Keeling of body scales (mid body), recorded as 0: none; 0.5: VS19to17: Ventral scale position of the reduction from 29 to 27 weak; 1: strong. scale rows; and then SC6to4, SC8to6, DV21to19, DV19to17, KHEADSC: Keeling of the scales on the back of the head. DV8to6, DV6to4. KTEMP: Keeling of the temporal scales. SC: Number of pairs of subcaudal scales (any unpaired scales are 3. Body dimensions All measurements are made on the right side of the head only unless treated as a pair). it was damaged, in which case they were done on the left. SUBLAB: Average number of sublabials on the left and right hand DEYE: Diameter of the eye measured between the edges of the side. surrounding scales. SUPLAB: Average number of supralabials on the left and right hand EYE2NOS: Distance between the eye and the nostril, measured side. between the suture between the second and third preocular (from VS: Number of ventral scales (VS), not including anal scale, the bottom) and the inner edge of the nostril. UHFRUGHGE\WKH'RZOLQJ  PHWKRG LHWKH¿UVW96LVWKHRQH LHEAD: Length of the head, between the tip of the snout to the ZKLFKFRQWDFWVWKH¿UVWGRUVDOVFDOHURZRQERWKVLGHV  posterior edge of the lower jawbone. PREOC: Number of preocular scales. LSUPOC: Length of the supraoculars measured. POSTOC: Number of postocular scales. WSUPOC: Width of the supraoculars measured. Anal: Divided or fused. SVL: Distance between the tip of the snout and the cloaca. NSC: Numbers of the single subcaudal scale. TAIL: Distance between the anterior edge of the first subcaudal Loreal: Numbers of the loreal. scale and the tail tip. 2. Scale reduction formula WMT: Width of the top rostal. These are recorded as a series of characters, each referring to a WMB: Width of the bottom rostal. specific reduction. Each position will have two characters, the WHEAD: Width of the head measured between the outer edges of dorso-ventral (DV) position of the reduction (the lowest of the two the supraoculars. merging scale rows), and the ventral scale (VS) position (counted WSUPOC: Width of the supraoculars measured at the widest part.