<I>Metrosideros Excelsa</I>
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The Taxonomy, Phylogeny and Impact of Mycosphaerella Species on Eucalypts in South-Western Australia
The Taxonomy, Phylogeny and Impact of Mycosphaerella species on Eucalypts in South-Western Australia By Aaron Maxwell BSc (Hons) Murdoch University Thesis submitted in fulfilment of the requirements for the degree of Doctor of Philosophy School of Biological Sciences and Biotechnology Murdoch University Perth, Western Australia April 2004 Declaration I declare that the work in this thesis is of my own research, except where reference is made, and has not previously been submitted for a degree at any institution Aaron Maxwell April 2004 II Acknowledgements This work forms part of a PhD project, which is funded by an Australian Postgraduate Award (Industry) grant. Integrated Tree Cropping Pty is the industry partner involved and their financial and in kind support is gratefully received. I am indebted to my supervisors Associate Professor Bernie Dell and Dr Giles Hardy for their advice and inspiration. Also, Professor Mike Wingfield for his generosity in funding and supporting my research visit to South Africa. Dr Hardy played a great role in getting me started on this road and I cannot thank him enough for opening my eyes to the wonders of mycology and plant pathology. Professor Dell’s great wit has been a welcome addition to his wealth of knowledge. A long list of people, have helped me along the way. I thank Sarah Jackson for reviewing chapters and papers, and for extensive help with lab work and the thinking through of vexing issues. Tania Jackson for lab, field, accommodation and writing expertise. Kar-Chun Tan helped greatly with the RAPD’s research. Chris Dunne and Sarah Collins for writing advice. -
AR TICLE Recommended Names for Pleomorphic Genera In
IMA FUNGUS · 6(2): 507–523 (2015) doi:10.5598/imafungus.2015.06.02.14 Recommended names for pleomorphic genera in Dothideomycetes ARTICLE Amy Y. Rossman1, Pedro W. Crous2,3, Kevin D. Hyde4,5, David L. Hawksworth6,7,8, André Aptroot9, Jose L. Bezerra10, Jayarama D. Bhat11, Eric Boehm12, Uwe Braun13, Saranyaphat Boonmee4,5, Erio Camporesi14, Putarak Chomnunti4,5, Dong-Qin Dai4,5, Melvina J. D’souza4,5, Asha Dissanayake4,5,15, E.B. Gareth Jones16, Johannes Z. Groenewald2, Margarita Hernández-Restrepo2,3, Sinang Hongsanan4,5, Walter M. Jaklitsch17, Ruvishika Jayawardena4,5,12, Li Wen Jing4,5, Paul M. Kirk18, James D. Lawrey19, Ausana Mapook4,5, Eric H.C. McKenzie20, Jutamart Monkai4,5, Alan J.L. Phillips21, Rungtiwa Phookamsak4,5, Huzefa A. Raja22, Keith A. Seifert23, Indunil Senanayake4,5, Bernard Slippers3, Satinee Suetrong24, Kazuaki Tanaka25, Joanne E. Taylor26, Kasun M. Thambugala4,5,27, Qing Tian4,5, Saowaluck Tibpromma4,5, Dhanushka N. Wanasinghe4,5,12, Nalin N. Wijayawardene4,5, Saowanee Wikee4,5, Joyce H.C. Woudenberg2, Hai-Xia Wu28,29, Jiye Yan12, Tao Yang2,30, Ying Zhang31 1Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon 97331, USA; corresponding author e-mail: amydianer@ yahoo.com 2CBS-KNAW Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands 3Department of Microbiology and Plant Pathology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa 4Center of Excellence in Fungal Research, School of Science, Mae Fah -
<I>Caliciopsis Pleomorpha</I> <I> Sp. Nov.</I> (<I>Ascomycota
VOLUME 2 DECEMBER 2018 Fungal Systematics and Evolution PAGES 45–56 doi.org/10.3114/fuse.2018.02.04 Caliciopsis pleomorpha sp. nov. (Ascomycota: Coryneliales) causing a severe canker disease of Eucalyptus cladocalyx and other eucalypt species in Australia I.G. Pascoe1*, P.A. McGee (Maher)2, I.W. Smith3, S.-Q. Dinh4, J. Edwards4 130 Beach Road, Rhyll, Victoria 3923, Australia 2RMIT University, GPO Box 2476, Melbourne VIC 3001, Australia 3Bushbury Forest Pathology Service, 31 Old Monbulk Road, Belgrave, Victoria 3160, Australia 4Agriculture Victoria Research, AgriBio, Centre for AgriBioscience, 5 Ring Road, La Trobe University, Bundoora, Victoria 3083, Australia *Corresponding author: [email protected] Key words: Abstract: Caliciopsis pleomorpha sp. nov. is described from a severe stem canker disease of cultivated Eucalyptus cladocalyx one new taxon ‘Nana’ (dwarf sugar gum) in Australia. The fungus is a pleomorphic ascomycete (Coryneliales), with pycnidial (pleurophoma- pathogenicity like) and hyphomycetous (phaeoacremonium-like) morphs, and differs in these respects and in ITS sequences from other stem canker Caliciopsis spp. The fungus was also found associated with cankers on other Eucalyptus species growing in native habitats, taxonomy and was successfully inoculated under glasshouse conditions into a wide range of Eucalyptus species on which it caused cankers of varying severity. Published online: 13 June 2018. INTRODUCTION MATERIALS AND METHODS Editor-in-Chief Prof. dr P.W. Crous, Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands. E-mail: [email protected] In 1979, a stem canker disease was observed on Eucalyptus Microscopic observations cladocalyx, at Frankston, Victoria, Australia. Cankers were first seen on E. -
A Class-Wide Phylogenetic Assessment of Dothideomycetes
available online at www.studiesinmycology.org StudieS in Mycology 64: 1–15. 2009 doi:10.3114/sim.2009.64.01 A class-wide phylogenetic assessment of Dothideomycetes C.L. Schoch1*, P.W. Crous2, J.Z. Groenewald2, E.W.A. Boehm3, T.I. Burgess4, J. de Gruyter2, 5, G.S. de Hoog2, L.J. Dixon6, M. Grube7, C. Gueidan2, Y. Harada8, S. Hatakeyama8, K. Hirayama8, T. Hosoya9, S.M. Huhndorf10, K.D. Hyde11, 33, E.B.G. Jones12, J. Kohlmeyer13, Å. Kruys14, Y.M. Li33, R. Lücking10, H.T. Lumbsch10, L. Marvanová15, J.S. Mbatchou10, 16, A.H. McVay17, A.N. Miller18, G.K. Mugambi10, 19, 27, L. Muggia7, M.P. Nelsen10, 20, P. Nelson21, C A. Owensby17, A.J.L. Phillips22, S. Phongpaichit23, S.B. Pointing24, V. Pujade-Renaud25, H.A. Raja26, E. Rivas Plata10, 27, B. Robbertse1, C. Ruibal28, J. Sakayaroj12, T. Sano8, L. Selbmann29, C.A. Shearer26, T. Shirouzu30, B. Slippers31, S. Suetrong12, 23, K. Tanaka8, B. Volkmann- Kohlmeyer13, M.J. Wingfield31, A.R. Wood32, J.H.C.Woudenberg2, H. Yonezawa8, Y. Zhang24, J.W. Spatafora17 1National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 45 Center Drive, MSC 6510, Bethesda, Maryland 20892-6510, U.S.A.; 2CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, Netherlands; 3Department of Biological Sciences, Kean University, 1000 Morris Ave., Union, New Jersey 07083, U.S.A.; 4Biological Sciences, Murdoch University, Murdoch, 6150, Australia; 5Plant Protection Service, P.O. Box 9102, 6700 HC Wageningen, The Netherlands; 6USDA-ARS Systematic Mycology and Microbiology -
Prillieuxina Aeglicola Sp. Nov. (Ascomycota), a New Black Mildew Fungus from Himachal Pradesh, India
Current Research in Environmental & Applied Mycology 5 (1): 70–73 (2015) ISSN 2229-2225 www.creamjournal.org Article CREAM Copyright © 2015 Online Edition Doi 10.5943/cream/5/1/9 Prillieuxina aeglicola sp. nov. (ascomycota), a new black mildew fungus from Himachal Pradesh, India Gautam AK1, 2 1 Department of Botany, Abhilashi Institute of Life Sciences, Mandi-175008 (H.P.) India. 2 Faculty of Agriculture, Abhilashi University, Mandi-175045 (H.P.) India. Gautam AK 2015 – Prillieuxina aeglicola sp. nov. (ascomycota), a new black mildew fungus from Himachal Pradesh, India. Current Research in Environmental & Applied Mycology 5(1), 70–73, Doi 10.5943/cream/5/1/9 Abstract A black mildew infection was observed on leaves of Aegle marmelos from Himachal Pradesh, India. The fungus as a species of Prillieuxina was characterized by substraight, branched hyphae without appressoria and setae; orbicular thyriothecia and brown uniseptate ascospores. Prillieuxina and its species are host specific fungi and no earlier reports on A. marmelos. Therefore new species is described and illustrated in the present paper based on morphology and specificity of host association. Key words – Black mildew – India – new species – Prillieuxina – taxonomy Introduction The genus Prillieuxina is an important group of fungi known to cause black mildew infection on variety of plant hosts. The genus is an ectophytic parasite differs from other black mildew fungi in having mycellium devoid of appressoria and setae. The genus possesses orbicular and astomatous thyriothecia with radiating cells and dehisces stellately at the center. The asci are of globose, octosporous, bitunicate type and ascospores brown, conglobate, uniseptate. During October 2013, a black mildew infection was observed on leaves of Aegle marmelos (Bael), a sacred subtropical tree species of Indian subcontinent. -
Proposed Generic Names for Dothideomycetes
Naming and outline of Dothideomycetes–2014 Nalin N. Wijayawardene1, 2, Pedro W. Crous3, Paul M. Kirk4, David L. Hawksworth4, 5, 6, Dongqin Dai1, 2, Eric Boehm7, Saranyaphat Boonmee1, 2, Uwe Braun8, Putarak Chomnunti1, 2, , Melvina J. D'souza1, 2, Paul Diederich9, Asha Dissanayake1, 2, 10, Mingkhuan Doilom1, 2, Francesco Doveri11, Singang Hongsanan1, 2, E.B. Gareth Jones12, 13, Johannes Z. Groenewald3, Ruvishika Jayawardena1, 2, 10, James D. Lawrey14, Yan Mei Li15, 16, Yong Xiang Liu17, Robert Lücking18, Hugo Madrid3, Dimuthu S. Manamgoda1, 2, Jutamart Monkai1, 2, Lucia Muggia19, 20, Matthew P. Nelsen18, 21, Ka-Lai Pang22, Rungtiwa Phookamsak1, 2, Indunil Senanayake1, 2, Carol A. Shearer23, Satinee Suetrong24, Kazuaki Tanaka25, Kasun M. Thambugala1, 2, 17, Saowanee Wikee1, 2, Hai-Xia Wu15, 16, Ying Zhang26, Begoña Aguirre-Hudson5, Siti A. Alias27, André Aptroot28, Ali H. Bahkali29, Jose L. Bezerra30, Jayarama D. Bhat1, 2, 31, Ekachai Chukeatirote1, 2, Cécile Gueidan5, Kazuyuki Hirayama25, G. Sybren De Hoog3, Ji Chuan Kang32, Kerry Knudsen33, Wen Jing Li1, 2, Xinghong Li10, ZouYi Liu17, Ausana Mapook1, 2, Eric H.C. McKenzie34, Andrew N. Miller35, Peter E. Mortimer36, 37, Dhanushka Nadeeshan1, 2, Alan J.L. Phillips38, Huzefa A. Raja39, Christian Scheuer19, Felix Schumm40, Joanne E. Taylor41, Qing Tian1, 2, Saowaluck Tibpromma1, 2, Yong Wang42, Jianchu Xu3, 4, Jiye Yan10, Supalak Yacharoen1, 2, Min Zhang15, 16, Joyce Woudenberg3 and K. D. Hyde1, 2, 37, 38 1Institute of Excellence in Fungal Research and 2School of Science, Mae Fah Luang University, -
Logs and Chips of Eighteen Eucalypt Species from Australia
United States Department of Agriculture Pest Risk Assessment Forest Service of the Importation Into Forest Products Laboratory the United States of General Technical Report Unprocessed Logs and FPL−GTR−137 Chips of Eighteen Eucalypt Species From Australia P. (=Tryphocaria) solida, P. tricuspis; Scolecobrotus westwoodi; Abstract Tessaromma undatum; Zygocera canosa], ghost moths and carpen- The unmitigated pest risk potential for the importation of unproc- terworms [Abantiades latipennis; Aenetus eximius, A. ligniveren, essed logs and chips of 18 species of eucalypts (Eucalyptus amyg- A. paradiseus; Zelotypia stacyi; Endoxyla cinereus (=Xyleutes dalina, E. cloeziana, E. delegatensis, E. diversicolor, E. dunnii, boisduvali), Endoxyla spp. (=Xyleutes spp.)], true powderpost E. globulus, E. grandis, E. nitens, E. obliqua, E. ovata, E. pilularis, beetles (Lyctus brunneus, L. costatus, L. discedens, L. parallelocol- E. regnans, E. saligna, E. sieberi, E. viminalis, Corymbia calo- lis; Minthea rugicollis), false powderpost or auger beetles (Bo- phylla, C. citriodora, and C. maculata) from Australia into the strychopsis jesuita; Mesoxylion collaris; Sinoxylon anale; Xylion United States was assessed by estimating the likelihood and conse- cylindricus; Xylobosca bispinosa; Xylodeleis obsipa, Xylopsocus quences of introduction of representative insects and pathogens of gibbicollis; Xylothrips religiosus; Xylotillus lindi), dampwood concern. Twenty-two individual pest risk assessments were pre- termite (Porotermes adamsoni), giant termite (Mastotermes dar- pared, fifteen dealing with insects and seven with pathogens. The winiensis), drywood termites (Neotermes insularis; Kalotermes selected organisms were representative examples of insects and rufinotum, K. banksiae; Ceratokalotermes spoliator; Glyptotermes pathogens found on foliage, on the bark, in the bark, and in the tuberculatus; Bifiditermes condonensis; Cryptotermes primus, wood of eucalypts. C. -
Chocolate Spot Disease of Eucalyptus
Mycol Progress (2012) 11:61–69 DOI 10.1007/s11557-010-0728-8 ORIGINAL ARTICLE Chocolate spot disease of Eucalyptus Ratchadawan Cheewangkoon & Johannes Z. Groenewald & Kevin D. Hyde & Chaiwat To-anun & Pedro W. Crous Received: 30 July 2010 /Revised: 6 November 2010 /Accepted: 26 November 2010 /Published online: 24 December 2010 # The Author(s) 2010. This article is published with open access at Springerlink.com Abstract Chocolate Spot leaf disease of Eucalyptus is superficial on the host tissue and conidiogenous cells that associated with several Heteroconium-like species of can have loci that are either inconspicuous or proliferating hyphomycetes that resemble Heteroconium s.str. in mor- percurrently. Furthermore, conidiogenous cells can either phology. They differ, however, in their ecology, with the occur solitary on hyphae, or be sporodochial, arranged on a former being plant pathogenic, while Heteroconium s.str. is weakly developed stroma, which further distinguishes a genus of sooty moulds. Results of molecular analyses, Alysidiella from Heteroconium. inferred from DNA sequences of the large subunit (LSU) and internal transcribed spacers (ITS) region of nrDNA, Keywords Alysidiella . Aulographina . Capnodiales . delineated four Heteroconium-like species on Eucalyptus, Capnodiaceae . Heteroconium namely H. eucalypti, H. kleinziense, Alysidiella parasitica, and one isolate resembling a novel species in a clade separate from the holotype of Heteroconium, H. citharexyli. Introduction Based on molecular phylogeny, morphology and ecology, the Heteroconium-like species associated with Chocolate Over the past 20 years, several collections have been Spot disease are reclassified in the genus Alysidiella, which obtained of a foliar disease of Eucalyptus spp. that was is shown to have mycelium that is immersed in and commonly referred to as ‘Chocolate Spot’. -
A Manual of Diseases of Eucalyptus in South-East Asia
A Manual of Diseases of Eucalypts in South-East Asia Kenneth M. Old Michael J. Wingfield Zi Qing Yuan A Manual of Diseases of Eucalypts in South-East Asia Kenneth M. Old CSIRO Forestry and Forest Products, Canberra, Australia Michael J. Wingfield Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria, South Africa Zi Qing Yuan School of Agricultural Science, University of Tasmania, Hobart, Australia Australian Centre for International Agricultural Research (ACIAR), Canberra, Australia Center for International Forestry Research (CIFOR), Bogor, Indonesia A manual of diseases of eucalypts in South-East Asia K.M. Old, M.J. Wingfield and Z.Q. Yuan © 2003 Center for International Forestry Research Published by Center for International Forestry Research Mailing address: P.O. Box 6596 JKPWB, Jakarta 10065, Indonesia Office address: Jl. CIFOR, Situ Gede, Sindang Barang, Bogor Barat 16680, Indonesia Tel.: +62 (251) 622622; Fax: +62 (251) 622100 E-mail: [email protected] Web site: http://www.cifor.cgiar.org ISBN 064306530 With the support of CSIRO Forestry and Forest Products PO Box E4008 Kingston ACT 2604 Canberra, Australia Cover, designed by Ruth Gibbs, includes a plantation of Eucalyptus camaldulensis, with trees in foreground severely damaged by leaf and shoot blight (front cover) and a clonal nursery of the same eucalypt species (back cover). Contents Acknowledgements and dedication iv Preface v Introduction Eucalypt plantations in South-East Asia 1 Eucalyptus diseases and the scope of this manual 2 Key to diseases -
Introducing the Consolidated Species Concept to Resolve Species in the <I>Teratosphaeriaceae</I>
Persoonia 33, 2014: 1–40 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158514X681981 Introducing the Consolidated Species Concept to resolve species in the Teratosphaeriaceae W. Quaedvlieg1, M. Binder1, J.Z. Groenewald1, B.A. Summerell2, A.J. Carnegie3, T.I. Burgess4, P.W. Crous1,5,6 Key words Abstract The Teratosphaeriaceae represents a recently established family that includes numerous saprobic, extremophilic, human opportunistic, and plant pathogenic fungi. Partial DNA sequence data of the 28S rRNA and Eucalyptus RPB2 genes strongly support a separation of the Mycosphaerellaceae from the Teratosphaeriaceae, and also pro- multi-locus vide support for the Extremaceae and Neodevriesiaceae, two novel families including many extremophilic fungi that phylogeny occur on a diversity of substrates. In addition, a multi-locus DNA sequence dataset was generated (ITS, LSU, Btub, species concepts Act, RPB2, EF-1α and Cal) to distinguish taxa in Mycosphaerella and Teratosphaeria associated with leaf disease taxonomy of Eucalyptus, leading to the introduction of 23 novel genera, five species and 48 new combinations. Species are distinguished based on a polyphasic approach, combining morphological, ecological and phylogenetic species con- cepts, named here as the Consolidated Species Concept (CSC). From the DNA sequence data generated, we show that each one of the five coding genes tested, reliably identify most of the species present in this dataset (except species of Pseudocercospora). The ITS gene serves as a primary barcode locus as it is easily generated and has the most extensive dataset available, while either Btub, EF-1α or RPB2 provide a useful secondary barcode locus. -
P. 1 1 Character Evolution of Modern Fly-Speck Fungi and Implications For
bioRxiv preprint doi: https://doi.org/10.1101/2020.03.13.989582; this version posted March 14, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 2 Character evolution of modern fly-speck fungi and implications for interpreting 3 thyriothecial fossils 4 5 Ludovic Le Renard*1, André L. Firmino2, Olinto L. Pereira3, Ruth A. Stockey4, 6 Mary. L. Berbee1 7 8 1Department of Botany, University of British Columbia, Vancouver BC, V6T 1Z4, Canada 9 2Instituto de Ciências Agrárias, Universidade Federal de Uberlândia, Monte Carmelo, Minas 10 Gerais, 38500-000, Brazil 11 3Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570- 12 000, Brazil 13 4Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon 97331, 14 USA 15 16 Email: [email protected] 17 18 Manuscript received _______; revision accepted _______. 19 20 Running head: Fly-speck fungi character evolution 21 22 23 p. 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.03.13.989582; this version posted March 14, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 24 25 Abstract 26 PREMISE OF THE STUDY: Fossils show that fly-speck fungi have been reproducing with 27 small, black thyriothecia on leaf surfaces for ~250 million years. We analyze morphological 28 characters of extant thyriothecial fungi to develop a phylogenetic framework for interpreting 29 fossil taxa. -
Introducing the Consolidated Species Concept to Resolve Species in the Teratosphaeriaceae
Persoonia 33, 2014: 1–40 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158514X681981 Introducing the Consolidated Species Concept to resolve species in the Teratosphaeriaceae W. Quaedvlieg1, M. Binder1, J.Z. Groenewald1, B.A. Summerell2, A.J. Carnegie3, T.I. Burgess4, P.W. Crous1,5,6 Key words Abstract The Teratosphaeriaceae represents a recently established family that includes numerous saprobic, extremophilic, human opportunistic, and plant pathogenic fungi. Partial DNA sequence data of the 28S rRNA and Eucalyptus RPB2 genes strongly support a separation of the Mycosphaerellaceae from the Teratosphaeriaceae, and also pro- multi-locus vide support for the Extremaceae and Neodevriesiaceae, two novel families including many extremophilic fungi that phylogeny occur on a diversity of substrates. In addition, a multi-locus DNA sequence dataset was generated (ITS, LSU, Btub, species concepts Act, RPB2, EF-1α and Cal) to distinguish taxa in Mycosphaerella and Teratosphaeria associated with leaf disease taxonomy of Eucalyptus, leading to the introduction of 23 novel genera, five species and 48 new combinations. Species are distinguished based on a polyphasic approach, combining morphological, ecological and phylogenetic species con- cepts, named here as the Consolidated Species Concept (CSC). From the DNA sequence data generated, we show that each one of the five coding genes tested, reliably identify most of the species present in this dataset (except species of Pseudocercospora). The ITS gene serves as a primary barcode locus as it is easily generated and has the most extensive dataset available, while either Btub, EF-1α or RPB2 provide a useful secondary barcode locus.