Pigment Signatures and Phylogenetic Relationships of the Pavlovophyceae (Haptophyta)1

Total Page:16

File Type:pdf, Size:1020Kb

Load more

J. Phycol. 39, 379–389 (2003) PIGMENT SIGNATURES AND PHYLOGENETIC RELATIONSHIPS OF THE PAVLOVOPHYCEAE (HAPTOPHYTA)1 Kees Van Lenning,2 Mikel Latasa, Marta Estrada Institut de Ciències del Mar, Consejo Superior de Investigaciones Científicas, Passeig Marítim 37-49, 08003 Barcelona, Spain Alberto G. Sáez, Linda Medlin Alfred Wegener Institute für Polar und Meeresforschung, Department of Biological Oceanography, Am. Handelshafen 12, D-27570 Bremerhaven, Germany Ian Probert, Benoît Véron Université de Caen Basse Normandie, Laboratoire de Biologie et Biotechnologies Marines, Esplanade de la Paix, 14032 Caen Cedex, France and Jeremy Young The Natural History Museum, Department of Palaeontology, Cromwell Rd, London SW7 5BD, UK Variations in the HPLC-derived pigment composi- Knowledge of photosynthetic pigment systems is es- tion of cultured Pavlovophyceae (Cavalier-Smith) Green sential to our understanding of taxonomic and bio- et Medlin were compared with phylogenetic relation- logical relationships within phytoplankton groups ships inferred from 18S rDNA sequencing, morpholog- and can be used for the estimation of phytoplankton ical characteristics, and current taxonomy. The four abundance in field populations using a chemotaxo- genera described for this haptophyte class (Diacronema nomic approach based on multiple pigments (Mackey Prauser emend. Green et Hibberd, Exanthemachrysis et al. 1996). Pigment analyses of natural field samples Lepailleur, Pavlova Butcher, and Rebecca Green) were and unialgal cultures are now commonly performed represented by nine different species (one of which using reverse-phase HPLC (High Performance Liquid with data from GeneBank only). Chlorophylls a, c1, Chromatography). 2 c2 and MgDVP (Mg-[3,8-divinyl]-phytoporphyrin-13 - All oxygenic photosynthetic organisms synthesize a methylcarboxylate) and the carotenoids fucoxanthin, monovinyl (MV) or a divinyl (DV) form of chl a, and diadinoxanthin, diatoxanthin, and ␤,␤-carotene were the sum of these two compounds (total chl a) is there- detected in all cultures. Species only differed in the fore commonly used as a proxy for total phytoplank- content of an unknown (diadinoxanthin-like) xantho- ton biomass. Each species synthesizes a specific suite phyll and two polar chl c forms, identified as a monovi- of additional pigments (chl types and carotenoids), nyl (chl c1-like) and a divinyl (chl c2-like) compound. which have a light-harvesting or photoprotective func- This is the first observation of the monovinyl form in tion (Demers et al. 1991, Falkowski and Raven 1997). haptophytes. Based on distribution of these two chl c The composition of these accessory pigments is noto- forms, species were separated into Pavlovophyceae pig- riously similar in all terrestrial plants but more com- ment types A, B, and C. These pigment types crossed plex and with a higher degree of variability among taxonomic boundaries at the generic level but were in phytoplankton species. Despite this diversity, similari- complete accordance with species groupings based on ties generally increase toward the lower taxonomic molecular phylogenetic relationships and certain levels (Jeffrey and Vesk 1997). This indicates that the ultrastructural characteristics (position and nature of complex metabolic processes required for pigment pyrenoid, stigma, and flagella). These results suggest synthesis must be genetically coded. Pigments are that characterization of the pigment signature of un- hence not only practical chemotaxonomic markers identified culture strains of Pavlovophyceae can be used for specific phytoplankton groups in aquatic ecosys- to predict their phylogenetic affinities and vice versa. tems, but also of potential use in phylogenetic recon- Additional studies have been initiated to evaluate this structions. possibility for the haptophyte class Prymnesiophyceae. Since the mid-1960s, cultured haptophytes have Key index words: 18S rDNA; chlorophyll c pigments; been the subject of many pigment studies (Jeffrey and divinyl chlorophylls; Haptophyta; monovinyl chloro- Allen 1964), and applications of advances in the analyt- phylls; Pavlovophyceae; phylogeny ical field revealed an extraordinary diversity in associ- ated pigments not observed for any other taxonomic group. Associated pigments include the carotenoids ␤ ␤ 1Received 7 May 2002. Accepted 4 December 2002. diadinoxanthin (Ddx), diatoxanthin (Dtx), , -caro- 2Author for correspondence: e-mail [email protected]. tene, ␤,⑀-carotene, fucoxanthin (Fx) (Jeffrey and 379 380 KEES VAN LENNING ET AL. Allen 1964, Norgård et al. 1974), 19Ј-hexanoyloxyfu- bers of the Prymnesiophyceae Hibberd emend. Cava- coxanthin (HFx) (Arpin et al. 1976), 4-keto-Fx (Ege- lier-Smith. The most obvious of these is the markedly land et al. 1999), and 4-keto-HFx (Garrido and Zapata anisokont nature of the flagella and the relatively sim- 1998, Egeland et al. 2000). The presence of the lat- ple arrangement of microtubules and fibrous roots ter was previously mentioned by Arpin et al. (1976) of the pavlovophyceaen flagellar-haptonematal basal but then suggested to be 19Ј-hexanoyloxy-paracen- complex (Green and Hori 1994). In addition, when trone 3-acetate. Further pigments include chl c1 and c2 scales occur in the Pavlovophyceae, they are not of the (based on elution order with chromatographic plate scale type found in the Prymnesiophyceae but method used; Jeffrey 1969, 1972), a not yet identified rather consist of small dense bodies. These so-called chl c-like (Fawley 1989) and MV and DV forms of chl knob-scales are considered to be modified scales (Green c3 (Jeffrey and Wright 1987, Fookes and Jeffrey 1989, 1980) or modified hairs (Cavalier-Smith 1994), which Garrido and Zapata 1993, 1998, Garrido et al. 1995). often form a dense investment on the longer flagel- In addition to these polar (nonesterified) chl types, lum together with fine microtubular hairs. The mi- two different nonpolar chl c pigments were detected totic process in the Pavlovophyceae also differs from in Emiliania huxleyi (Nelson and Wakeham 1989) and that of the Prymnesiophyceae (Green and Hori 1988, Chrysochromulina polylepsis (Zapata et al. 1998), respec- Hori and Green 1994). Medlin et al. (1997), using a tively. These compounds were recently identified as a molecular clock calibrated from the coccolithophorid chl c2 moiety esterified to a monogalactosyldiacylglyc- fossil record, placed an average time of divergence for eride bearing a different combination of two fatty acid the two classes of the Haptophyta at about 420 million residues (Garrido et al. 2000, Zapata et al. 2001). years ago from an 18S rRNA phylogeny. Based on combinations of accessory pigments, a range Biochemical support for the clear distinction of the of haptophyte pigment types were defined (Jeffrey two haptophyte classes has been provided by the de- and Wright 1994, Garrido 1997, Rodríguez 2002). tection of unusual dihydroxysterols (steroidal diols Comparison of DNA sequences during the last termed “pavlovols”), which are restricted to species years resulted in outstanding advances in understand- from the Pavlovophyceae (Véron et al. 1996, Volkman ing phylogenetic relationships among haptophyte et al. 1997). Considerable ecological diversity is appar- species and members from other taxonomic groups. ent within the Pavlovophyceae, members of which are Combining molecular studies with detailed analyses found in oceanic, coastal, brackish, and freshwater en- of pigments should provide a robust approach to de- vironments, and individual species may also be widely termine phylogenetic relationships in algal groups. distributed geographically (Green 1980). Moreover, this approach can be used to evaluate evo- lutionary development of the photosystem. materials and methods In the present work, these possibilities were evalu- ated using cultured representatives of the haptophyte Experimental strains and culture conditions. Monoclonal strains class Pavlovophyceae (Cavalier-Smith) Green et Med- of the haptophyte species Diacronema vlkianum Prauser emend. Green et Hibberd (HAP 67), Exanthemachrysis gayraliae Le- lin. This class has been largely ignored in phyloge- pailleur (HAP 15), Pavlova gyrans Butcher emend. Green et netic studies but is a common component of coastal Manton (HAP 28), Pavlova lutheri (Droop) Green (HAP 44 ϭ phytoplankton populations. This group was selected PLY75, UTEXLB1293), Pavlova pinguis Green emend. Green because it comprises a limited number of species with (HAP 19), Pavlova virescens Billard (HAP 16), and Pavlova sp. (HAP 33) were obtained from the Algobank culture collection minor, but well-defined, morphological differences, (University of Caen, France). Of these, E. gayraliae, P. virescens, currently classified in one order (Pavlovales Green), and P. lutheri are type strains. Pavlova sp. (HAP 33), an unde- one family (Pavlovaceae Green), and four genera (Di- scribed marine species, is provisionally named P. “pseudograni- acronema Prauser emend. Green et Hibberd, Exanthe- fera” because of similarities to the freshwater species P. granifera machrysis Lepailleur, Pavlova Butcher, and Rebecca (Mack) Green (Billard, personal communication). All strains were grown in Tris II enriched seawater medium (Cosson Green). 1987) at room temperature (20Њ C) under natural illumination -The class Pavlovophyceae was erected by Cavalier- (maximum 35 ␮mol photonsؒmϪ2ؒsϪ1) provided by a north-fac Smith (1993) based on the order Pavlovales Green. ing window. Taxonomic identity was confirmed by TEM, and This class
Recommended publications
  • Ecology of Oceanic Coccolithophores. I. Nutritional Preferences of the Two Stages in the Life Cycle of Coccolithus Braarudii and Calcidiscus Leptoporus

    Ecology of Oceanic Coccolithophores. I. Nutritional Preferences of the Two Stages in the Life Cycle of Coccolithus Braarudii and Calcidiscus Leptoporus

    AQUATIC MICROBIAL ECOLOGY Vol. 44: 291–301, 2006 Published October 10 Aquat Microb Ecol Ecology of oceanic coccolithophores. I. Nutritional preferences of the two stages in the life cycle of Coccolithus braarudii and Calcidiscus leptoporus Aude Houdan, Ian Probert, Céline Zatylny, Benoît Véron*, Chantal Billard Laboratoire de Biologie et Biotechnologies Marines, Université de Caen Basse-Normandie, Esplanade de la Paix, 14032 Caen Cedex, France ABSTRACT: Coccolithus braarudii and Calcidiscus leptoporus are 2 coccolithophores (Prymnesio- phyceae: Haptophyta) known to possess a complex heteromorphic life cycle, with alternation between a motile holococcolith-bearing haploid stage and a non-motile heterococcolith-bearing diploid stage. The ecological implications of this type of life cycle in coccolithophores are currently poorly known. The nutritional preferences of each stage of both species, and their growth response to conditions of turbulence were investigated by varying their growth conditions. Of the different cul- ture media tested, only the synthetic seawater medium did not support the growth of both stages of C. braarudii and C. leptoporus. With natural seawater-based media, the growth rate of the haploid phase of both coccolithophores was stimulated by the addition of soil extract (K/2: 0.23 ± 0.02 d–1 and K/2 with soil extract 0.35 ± 0.01 d–1 for the C. braarudii haploid stage), while the diploid phase was not, indicating that the motile stage is capable of utilizing compounds present in soil extract or ingest- ing bacteria that are activated in enriched media. The addition of sodium acetate to the medium also stimulated the haploid phase of C.
  • University of Oklahoma

    University of Oklahoma

    UNIVERSITY OF OKLAHOMA GRADUATE COLLEGE MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION SUBMITTED TO THE GRADUATE FACULTY in partial fulfillment of the requirements for the Degree of DOCTOR OF PHILOSOPHY By JOSHUA THOMAS COOPER Norman, Oklahoma 2017 MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION APPROVED FOR THE DEPARTMENT OF MICROBIOLOGY AND PLANT BIOLOGY BY ______________________________ Dr. Boris Wawrik, Chair ______________________________ Dr. J. Phil Gibson ______________________________ Dr. Anne K. Dunn ______________________________ Dr. John Paul Masly ______________________________ Dr. K. David Hambright ii © Copyright by JOSHUA THOMAS COOPER 2017 All Rights Reserved. iii Acknowledgments I would like to thank my two advisors Dr. Boris Wawrik and Dr. J. Phil Gibson for helping me become a better scientist and better educator. I would also like to thank my committee members Dr. Anne K. Dunn, Dr. K. David Hambright, and Dr. J.P. Masly for providing valuable inputs that lead me to carefully consider my research questions. I would also like to thank Dr. J.P. Masly for the opportunity to coauthor a book chapter on the speciation of diatoms. It is still such a privilege that you believed in me and my crazy diatom ideas to form a concise chapter in addition to learn your style of writing has been a benefit to my professional development. I’m also thankful for my first undergraduate research mentor, Dr. Miriam Steinitz-Kannan, now retired from Northern Kentucky University, who was the first to show the amazing wonders of pond scum. Who knew that studying diatoms and algae as an undergraduate would lead me all the way to a Ph.D.
  • An Explanation for the 18O Excess in Noelaerhabdaceae Coccolith Calcite

    An Explanation for the 18O Excess in Noelaerhabdaceae Coccolith Calcite

    Available online at www.sciencedirect.com ScienceDirect Geochimica et Cosmochimica Acta 189 (2016) 132–142 www.elsevier.com/locate/gca An explanation for the 18O excess in Noelaerhabdaceae coccolith calcite M. Hermoso a,⇑, F. Minoletti b,c, G. Aloisi d,e, M. Bonifacie f, H.L.O. McClelland a,1, N. Labourdette b,c, P. Renforth g, C. Chaduteau f, R.E.M. Rickaby a a University of Oxford – Department of Earth Sciences, South Parks Road, Oxford OX1 3AN, United Kingdom b Sorbonne Universite´s, UPMC Universite´ Paris 06 – Institut de Sciences de la Terre de Paris (ISTeP), 4 Place Jussieu, 75252 Paris Cedex 05, France c CNRS – UMR 7193 ISTeP, 4 Place Jussieu, 75252 Paris Cedex 05, France d Sorbonne Universite´s, UPMC Universite´ Paris 06 – UMR 7159 LOCEAN, 4 Place Jussieu, 75005 Paris, France e CNRS – UMR 7159 LOCEAN, 4 Place Jussieu, 75005 Paris, France f Institut de Physique du Globe de Paris, Sorbonne Paris Cite´, Universite´ Paris-Diderot, UMR CNRS 7154, 1 rue Jussieu, 75238 Paris Cedex, France g Cardiff University – School of Earth and Ocean Sciences, Parks Place, Cardiff CF10 3AT, United Kingdom Received 10 November 2015; accepted in revised form 11 June 2016; available online 18 June 2016 Abstract Coccoliths have dominated the sedimentary archive in the pelagic environment since the Jurassic. The biominerals pro- duced by the coccolithophores are ideally placed to infer sea surface temperatures from their oxygen isotopic composition, as calcification in this photosynthetic algal group only occurs in the sunlit surface waters. In the present study, we dissect the isotopic mechanisms contributing to the ‘‘vital effect”, which overprints the oceanic temperatures recorded in coccolith calcite.
  • The Plankton Lifeform Extraction Tool: a Digital Tool to Increase The

    The Plankton Lifeform Extraction Tool: a Digital Tool to Increase The

    Discussions https://doi.org/10.5194/essd-2021-171 Earth System Preprint. Discussion started: 21 July 2021 Science c Author(s) 2021. CC BY 4.0 License. Open Access Open Data The Plankton Lifeform Extraction Tool: A digital tool to increase the discoverability and usability of plankton time-series data Clare Ostle1*, Kevin Paxman1, Carolyn A. Graves2, Mathew Arnold1, Felipe Artigas3, Angus Atkinson4, Anaïs Aubert5, Malcolm Baptie6, Beth Bear7, Jacob Bedford8, Michael Best9, Eileen 5 Bresnan10, Rachel Brittain1, Derek Broughton1, Alexandre Budria5,11, Kathryn Cook12, Michelle Devlin7, George Graham1, Nick Halliday1, Pierre Hélaouët1, Marie Johansen13, David G. Johns1, Dan Lear1, Margarita Machairopoulou10, April McKinney14, Adam Mellor14, Alex Milligan7, Sophie Pitois7, Isabelle Rombouts5, Cordula Scherer15, Paul Tett16, Claire Widdicombe4, and Abigail McQuatters-Gollop8 1 10 The Marine Biological Association (MBA), The Laboratory, Citadel Hill, Plymouth, PL1 2PB, UK. 2 Centre for Environment Fisheries and Aquacu∑lture Science (Cefas), Weymouth, UK. 3 Université du Littoral Côte d’Opale, Université de Lille, CNRS UMR 8187 LOG, Laboratoire d’Océanologie et de Géosciences, Wimereux, France. 4 Plymouth Marine Laboratory, Prospect Place, Plymouth, PL1 3DH, UK. 5 15 Muséum National d’Histoire Naturelle (MNHN), CRESCO, 38 UMS Patrinat, Dinard, France. 6 Scottish Environment Protection Agency, Angus Smith Building, Maxim 6, Parklands Avenue, Eurocentral, Holytown, North Lanarkshire ML1 4WQ, UK. 7 Centre for Environment Fisheries and Aquaculture Science (Cefas), Lowestoft, UK. 8 Marine Conservation Research Group, University of Plymouth, Drake Circus, Plymouth, PL4 8AA, UK. 9 20 The Environment Agency, Kingfisher House, Goldhay Way, Peterborough, PE4 6HL, UK. 10 Marine Scotland Science, Marine Laboratory, 375 Victoria Road, Aberdeen, AB11 9DB, UK.
  • Aquatic Species Program Review Proceedings of the March 1985 Principal Investigators Meeting

    Aquatic Species Program Review Proceedings of the March 1985 Principal Investigators Meeting

    NOTICE This report was prepared as an account of work sponsored by the United States Government. Neither the United States nor the United States Department of Energy, nor any of their employees, nor any of their contractors, subcontractors, or their employees, makes any warranty, expressed or implied, or assumes any legai liability or responsibility for the accuracy, completeness or usefulness of any information, apparatus, product or process disclosed, or represents that its use would not infringe privately owned rights. Printed in the United States of America Available from: National Technical Information Service U.S. Departmenr of Commerce 5285 Port Royal Road Springfield, VA 221 61 Price: Microfiche A01 Printed Copy A1 6 Codes are ~sedfor pricing ail publications. The code is determined by the number of pages in the publication. lnformation pertaining to the pricing codes can be found in the current issue of the following publications, which are generally available in most tibraries; Energy Research Abstracts. (ERA); Government Reports Announcements and Index (GRA and I); Scientific and Technical Abstract Reports (STAR;; and publication. NTIS-PR-360 available from NT1S at the above address. SER IICP-231-2700 UC Category: 61c DE85Ol2137 Aquatic Species Program Review Proceedings of the March 1985 Principal Investigators Meeting 20 - 21 March 1985 Golden, CO June 1985 Prepared under Task No. 4513.10 FTP No. 513 Solar Energy Research Institute A Division of Midwest Research Institute 1617 Cole Boulevard Golden, Colorado 80401 Prepared for the U.S. Department of Energy Contract No. DE-AC02-83CH10093 PREFACE This volume contains progress reports presented by the Aquatic Species Program subcontractors and SERl researchers at the SERl Aquatic Species Review held at SERI, March 20 and 2 1, 1985.
  • Within-Arctic Horizontal Gene Transfer As a Driver of Convergent Evolution in Distantly Related 1 Microalgae 2 Richard G. Do

    Within-Arctic Horizontal Gene Transfer As a Driver of Convergent Evolution in Distantly Related 1 Microalgae 2 Richard G. Do

    bioRxiv preprint doi: https://doi.org/10.1101/2021.07.31.454568; this version posted August 2, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Within-Arctic horizontal gene transfer as a driver of convergent evolution in distantly related 2 microalgae 3 Richard G. Dorrell*+1,2, Alan Kuo3*, Zoltan Füssy4, Elisabeth Richardson5,6, Asaf Salamov3, Nikola 4 Zarevski,1,2,7 Nastasia J. Freyria8, Federico M. Ibarbalz1,2,9, Jerry Jenkins3,10, Juan Jose Pierella 5 Karlusich1,2, Andrei Stecca Steindorff3, Robyn E. Edgar8, Lori Handley10, Kathleen Lail3, Anna Lipzen3, 6 Vincent Lombard11, John McFarlane5, Charlotte Nef1,2, Anna M.G. Novák Vanclová1,2, Yi Peng3, Chris 7 Plott10, Marianne Potvin8, Fabio Rocha Jimenez Vieira1,2, Kerrie Barry3, Joel B. Dacks5, Colomban de 8 Vargas2,12, Bernard Henrissat11,13, Eric Pelletier2,14, Jeremy Schmutz3,10, Patrick Wincker2,14, Chris 9 Bowler1,2, Igor V. Grigoriev3,15, and Connie Lovejoy+8 10 11 1 Institut de Biologie de l'ENS (IBENS), Département de Biologie, École Normale Supérieure, CNRS, 12 INSERM, Université PSL, 75005 Paris, France 13 2CNRS Research Federation for the study of Global Ocean Systems Ecology and Evolution, 14 FR2022/Tara Oceans GOSEE, 3 rue Michel-Ange, 75016 Paris, France 15 3 US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, 1 16 Cyclotron Road, Berkeley,
  • Diversity and Evolution of Protist Mitochondria: Introns, Gene Content and Genome Architecture

    Diversity and Evolution of Protist Mitochondria: Introns, Gene Content and Genome Architecture

    Diversity and Evolution of Protist Mitochondria: Introns, Gene Content and Genome Architecture 著者 西村 祐貴 内容記述 この博士論文は内容の要約のみの公開(または一部 非公開)になっています year 2016 その他のタイトル プロティストミトコンドリアの多様性と進化:イン トロン、遺伝子組成、ゲノム構造 学位授与大学 筑波大学 (University of Tsukuba) 学位授与年度 2015 報告番号 12102甲第7737号 URL http://hdl.handle.net/2241/00144261 Diversity and Evolution of Protist Mitochondria: Introns, Gene Content and Genome Architecture A Dissertation Submitted to the Graduate School of Life and Environmental Sciences, the University of Tsukuba in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy in Science (Doctral Program in Biologial Sciences) Yuki NISHIMURA Table of Contents Abstract ........................................................................................................................... 1 Genes encoded in mitochondrial genomes of eukaryotes ..................................................... 3 Terminology .......................................................................................................................... 4 Chapter 1. General introduction ................................................................................ 5 The origin and evolution of mitochondria ............................................................................ 5 Mobile introns in mitochondrial genome .............................................................................. 6 The organisms which are lacking in mitochondrial genome data ........................................ 8 Chapter 2. Lateral transfers of mobile introns
  • Literature Review of the Microalga Prymnesium Parvum and Its Associated Toxicity

    Literature Review of the Microalga Prymnesium Parvum and Its Associated Toxicity

    Literature Review of the Microalga Prymnesium parvum and its Associated Toxicity Sean Watson, Texas Parks and Wildlife Department, August 2001 Introduction Recent large-scale fish kills associated with the golden-alga, Prymnesium parvum, have imposed monetary and ecological losses on the state of Texas. This phytoflagellate has been implicated in fish kills around the world since the 1930’s (Reichenbach-Klinke 1973). Kills due to P. parvum blooms are normally accompanied by water with a golden-yellow coloration that foams in riffles (Rhodes and Hubbs 1992). The factors responsible for the appearance of toxic P. parvum blooms have yet to be determined. The purpose of this paper is to present a review of the work by those around the globe whom have worked with Prymnesium parvum in an attempt to better understand the biology and ecology of this organism as well as its associated toxicity. I will concentrate on the relevant biology important in the ecology and identification of this organism, its occurrence, nutritional requirements, factors governing its toxicity, and methods used to control toxic blooms with which it is associated. Background Biology and Diagnostic Features Prymnesium parvum is a microalga in the class Prymnesiophyceae, order Prymnesiales and family Prymnesiaceae, and is a common member of the marine phytoplankton (Bold and Wynne 1985, Larsen 1999, Lee 1980). It is a uninucleate, unicellular flagellate with an ellipsoid or narrowly oval cell shape (Lee 1980, Prescott 1968). Green, Hibberd and Pienaar (1982) reported that the cells range from 8-11 micrometers long and 4-6 micrometers wide. The authors also noted that the cells are PWD RP T3200-1158 (8/01) 2 Lit.
  • PRYMNESIUM FAVEOLATUM SP. NOV. (PRYMNESIOPHYCEAE), a NEW TOXIC SPECIES from the MEDITERRANEAN SEA J Fresnel, I

    PRYMNESIUM FAVEOLATUM SP. NOV. (PRYMNESIOPHYCEAE), a NEW TOXIC SPECIES from the MEDITERRANEAN SEA J Fresnel, I

    PRYMNESIUM FAVEOLATUM SP. NOV. (PRYMNESIOPHYCEAE), A NEW TOXIC SPECIES FROM THE MEDITERRANEAN SEA J Fresnel, I. Probert, C. Billard To cite this version: J Fresnel, I. Probert, C. Billard. PRYMNESIUM FAVEOLATUM SP. NOV. (PRYMNESIO- PHYCEAE), A NEW TOXIC SPECIES FROM THE MEDITERRANEAN SEA. Vie et Milieu / Life & Environment, Observatoire Océanologique - Laboratoire Arago, 2001, pp.89-97. hal-03192104 HAL Id: hal-03192104 https://hal.sorbonne-universite.fr/hal-03192104 Submitted on 7 Apr 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. VIE ET MILIEU, 2001, 51 (1-2) : 89-97 PRYMNESIUM FAVEOLATUM SP. NOV. (PRYMNESIOPHYCEAE), A NEW TOXIC SPECIES FROM THE MEDITERRANEAN SEA /. FRESNEL, I. PROBERT, C. BILLARD Laboratoire de Biologie et Biotechnologies Marines, Université de Caen, Esplanade de la Paix, 14032 Caen Cedex, France PRYMNESIUM FAVEOLATUM SP. NOV. ABSTRACT. - A new marine species of Prymnesium is described based on cultu- PRYMNESIOPHYCEAE red material originating from a sublittoral sample collected on the eastern French SCALES Mediterranean coast. Prymnesium faveolatum sp. nov. exhibits typical generic cha- ULTRASTRUCTURE TOXICITY racters in terms of cell morphometry, swimming mode and organelle arrangement. MEDITERRANEAN Organic body scales, présent in several proximal layers, have a narrow inflexed rim and are ornamented with a variably developed cross.
  • Introns, Gene Content and Genome Architecture

    Introns, Gene Content and Genome Architecture

    Diversity and Evolution of Protist Mitochondria: Introns, Gene Content and Genome Architecture A Dissertation Submitted to the Graduate School of Life and Environmental Sciences, the University of Tsukuba in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy in Science (Doctral Program in Biologial Sciences) Yuki NISHIMURA Table of Contents Abstract ........................................................................................................................... 1 Genes encoded in mitochondrial genomes of eukaryotes ..................................................... 3 Terminology .......................................................................................................................... 4 Chapter 1. General introduction ................................................................................ 5 The origin and evolution of mitochondria ............................................................................ 5 Mobile introns in mitochondrial genome .............................................................................. 6 The organisms which are lacking in mitochondrial genome data ........................................ 8 Chapter 2. Lateral transfers of mobile introns among distantly related mitochondrial genomes ................................................................................................ 11 Summary ................................................................................................................................ 11 2-1. Leucocryptos
  • Emerging Interaction Patterns in the Emiliania Huxleyi-Ehv System

    Emerging Interaction Patterns in the Emiliania Huxleyi-Ehv System

    viruses Article Emerging Interaction Patterns in the Emiliania huxleyi-EhV System Eliana Ruiz 1,*, Monique Oosterhof 1,2, Ruth-Anne Sandaa 1, Aud Larsen 1,3 and António Pagarete 1 1 Department of Biology, University of Bergen, Bergen 5006, Norway; [email protected] (R.-A.S.); [email protected] (A.P.) 2 NRL for fish, Shellfish and Crustacean Diseases, Central Veterinary Institute of Wageningen UR, Lelystad 8221 RA, The Nederlands; [email protected] 3 Uni Research Environment, Nygårdsgaten 112, Bergen 5008, Norway; [email protected] * Correspondence: [email protected]; Tel.: +47-5558-8194 Academic Editors: Mathias Middelboe and Corina Brussaard Received: 30 January 2017; Accepted: 16 March 2017; Published: 22 March 2017 Abstract: Viruses are thought to be fundamental in driving microbial diversity in the oceanic planktonic realm. That role and associated emerging infection patterns remain particularly elusive for eukaryotic phytoplankton and their viruses. Here we used a vast number of strains from the model system Emiliania huxleyi/Emiliania huxleyi Virus to quantify parameters such as growth rate (µ), resistance (R), and viral production (Vp) capacities. Algal and viral abundances were monitored by flow cytometry during 72-h incubation experiments. The results pointed out higher viral production capacity in generalist EhV strains, and the virus-host infection network showed a strong co-evolution pattern between E. huxleyi and EhV populations. The existence of a trade-off between resistance and growth capacities was not confirmed. Keywords: Phycodnaviridae; Coccolithovirus; Coccolithophore; Haptophyta; Killing-the-winner; cost of resistance; infectivity trade-offs; algae virus; marine viral ecology; viral-host interactions 1.
  • Integrative Taxonomy of the Pavlovophyceae (Haptophyta): a Reassessment

    Integrative Taxonomy of the Pavlovophyceae (Haptophyta): a Reassessment

    Protist, Vol. 162, 738–761, November 2011 http://www.elsevier.de/protis Published online date 28 June 2011 ORIGINAL PAPER Integrative Taxonomy of the Pavlovophyceae (Haptophyta): A Reassessment El Mahdi Bendifa,b,1, Ian Proberta,2, Annie Hervéc, Chantal Billardb, Didier Gouxd, Christophe Lelongb, Jean-Paul Cadoretc, and Benoît Vérona,b,3 aUniversité de Caen Basse-Normandie, Algobank-Caen, IFR 146, 14032 Caen, France bUniversité de Caen Basse-Normandie, UMR 100 PE2 M - IFREMER, 14032 Caen, France cIFREMER, Laboratoire de Physiologie et Biotechnologie des Algues, rue de l’Ile d’Yeu, BP21105, 44311 Nantes, France dUniversité de Caen Basse-Normandie, Centre de Microscopie Appliquée à la Biologie, IFR 146, 14032 Caen, France Submitted October 18, 2010; Accepted March 15, 2011 Monitoring Editor: Barry S. C. Leadbeater. The Pavlovophyceae (Haptophyta) contains four genera (Pavlova, Diacronema, Exanthemachrysis and Rebecca) and only thirteen characterised species, several of which are important in ecological and eco- nomic contexts. We have constructed molecular phylogenies inferred from sequencing of ribosomal gene markers with comprehensive coverage of the described diversity, using type strains when avail- able, together with additional cultured strains. The morphology and ultrastructure of 12 of the described species was also re-examined and the pigment signatures of many culture strains were determined. The molecular analysis revealed that sequences of all described species differed, although those of Pavlova gyrans and P. pinguis were nearly identical, these potentially forming a single cryptic species complex. Four well-delineated genetic clades were identified, one of which included species of both Pavlova and Diacronema. Unique combinations of morphological/ultrastructural characters were iden- tified for each of these clades.