Artificial Selection and Domestication: Modern Lessons from Darwin's
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Maladaptation in Feral and Domesticated Animals
Nova Southeastern University NSUWorks Biology Faculty Articles Department of Biological Sciences 8-2019 Maladaptation in Feral and Domesticated Animals Eben Gering Michigan State University, [email protected] Darren Incorvaia Michigan State University R. Henriksen Linkoping University- Sweden Dominic Wright Linkoping University- Sweden Follow this and additional works at: https://nsuworks.nova.edu/cnso_bio_facarticles Part of the Biology Commons NSUWorks Citation Gering, Eben; Darren Incorvaia; R. Henriksen; and Dominic Wright. 2019. "Maladaptation in Feral and Domesticated Animals." Evolutionary Applications 12, (7): 1274-1286. doi:10.1111/eva.12784. This Article is brought to you for free and open access by the Department of Biological Sciences at NSUWorks. It has been accepted for inclusion in Biology Faculty Articles by an authorized administrator of NSUWorks. For more information, please contact [email protected]. Received: 17 October 2018 | Revised: 10 January 2019 | Accepted: 7 February 2019 DOI: 10.1111/eva.12784 SPECIAL ISSUE REVIEW AND SYNTHESES Maladaptation in feral and domesticated animals Eben Gering1 | Darren Incorvaia1 | Rie Henriksen2 | Dominic Wright2 | Thomas Getty1 1Department of Integrative Biology and Ecology, Evolutionary Biology, and Behavior Abstract Program, Michigan State University, East Selection regimes and population structures can be powerfully changed by domesti‐ Lansing, Michigan cation and feralization, and these changes can modulate animal fitness in both cap‐ 2IIFM Biology and AVIAN Behavioural Genomics and Physiology Group, Linköping tive and natural environments. In this review, we synthesize recent studies of these University, Sweden two processes and consider their impacts on organismal and population fitness. Correspondence Domestication and feralization offer multiple windows into the forms and mecha‐ Eben Gering, Department of Integrative nisms of maladaptation. -
The Evolution of Animal Domestication
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/266740619 The Evolution of Animal Domestication Article in Annual Review of Ecology Evolution and Systematics · October 2014 DOI: 10.1146/annurev-ecolsys-120213-091620 CITATIONS READS 179 3,162 2 authors: Greger Larson Dorian Q Fuller University of Oxford University College London 196 PUBLICATIONS 6,523 CITATIONS 322 PUBLICATIONS 12,021 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Dog Domestication View project Rwandan Archaeology View project All content following this page was uploaded by Dorian Q Fuller on 12 October 2014. The user has requested enhancement of the downloaded file. ES45CH06-Larson ARI 16 September 2014 11:18 V I E E W R S I E N C N A D V A The Evolution of Animal Domestication Greger Larson1 and Dorian Q. Fuller2 1Durham Evolution and Ancient DNA, Department of Archaeology, Durham University, Durham, DH1 3LE, United Kingdom; email: [email protected] 2Institute of Archaeology, University College London, London WC1H 0PY, United Kingdom Annu. Rev. Ecol. Evol. Syst. 2014. 66:115–36 Keywords The Annual Review of Ecology, Evolution, and archaeology, genetics, livestock, introgression, selection, agriculture Systematics is online at ecolsys.annualreviews.org This article’s doi: Abstract 10.1146/annurev-ecolsys-120213-091620 The domestication of plants and animals over the past 11,500 years has Copyright c 2014 by Annual Reviews. had a significant effect not just on the domesticated taxa but also on human All rights reserved evolution and on the biosphere as a whole. -
The History of Farm Foxes Undermines the Animal Domestication Syndrome, Trends in Ecology & Evolution (2019)
Please cite this article in press as: Lord et al., The History of Farm Foxes Undermines the Animal Domestication Syndrome, Trends in Ecology & Evolution (2019), https://doi.org/10.1016/j.tree.2019.10.011 Trends in Ecology & Evolution Opinion The History of Farm Foxes Undermines the Animal Domestication Syndrome Kathryn A. Lord,1,2 Greger Larson,3,@ Raymond P. Coppinger,4,6 and Elinor K. Karlsson1,2,5,@,* The Russian Farm-Fox Experiment is the best known experimental study in animal domestication. Highlights By subjecting a population of foxes to selection for tameness alone, Dimitry Belyaev generated The ‘domestication syndrome’ has foxes that possessed a suite of characteristics that mimicked those found across domesticated been a central focus of research species. This ‘domestication syndrome’ has been a central focus of research into the biological into the biological processes un- pathways modified during domestication. Here, we chart the origins of Belyaev’s foxes in derlying domestication. The eastern Canada and critically assess the appearance of domestication syndrome traits across an- Russian Farm-Fox Experiment was imal domesticates. Our results suggest that both the conclusions of the Farm-Fox Experiment the first to test whether there is a and the ubiquity of domestication syndrome have been overstated. To understand the process causal relationship between selec- tion for tameness and the domes- of domestication requires a more comprehensive approach focused on essential adaptations to tication syndrome. human-modified environments. Historical records and genetic The Origins of Domestication Syndrome analysis show that the foxes used in The domestication syndrome describes a suite of behavioral and morphological characteristics the Farm-Fox Experiment origi- consistently observed in domesticated populations. -
UNIVERSITY of CALIFORNIA Los Angeles the Evolution of Animals Through Domestication and Other Human Relationships
UNIVERSITY OF CALIFORNIA Los Angeles The Evolution of Animals through Domestication and other Human Relationships: An Animal-Centered Approach A thesis submitted in partial satisfaction of the requirements for the degree Master of Arts in Anthropology by Steven Michael Ammerman 2017 ©Copyright by Steven Michael Ammerman 2017 ABSTRACT OF THE THESIS The Evolution of Animals through Domestication and other Human Relationships: An Animal-Centered Approach by Steven Michael Ammerman Master of Arts in Anthropology University of California, Los Angeles, 2017 Professor Monica L. Smith, Chair As a component of the environment themselves, humans maintain a mutualistic modifying process with that environment. The interaction between humans and animals has led to different categories of relationships—commensal animals, tame animals, domesticated animals, and feral animals. In the study of human-animal interactions, the foremost consideration is how the niche construction of humans affects the evolutionary trajectory of other animals, but other animals also construct niches within this human-impacted environment to enhance their survival. The concept of niche construction provides a useful way of thinking about how humans and animals interact in the environment because this concept considers physical changes, behavioral changes, and cultural changes. In an animal-centered approach, consideration of how the traits and actions of animals play an active role in allowing and encouraging their ongoing relationships with humans is just as important as the consideration of actions of humans. ii The thesis of Steven Michael Ammerman is approved. Nancy E. Levine P. Jeffrey Brantingham Monica L. Smith, Committee Chair University of California, Los Angeles 2017 iii Table of Contents 1. -
Paleogenomics of Animal Domestication
Paleogenomics of Animal Domestication Evan K. Irving-Pease, Hannah Ryan, Alexandra Jamieson, Evangelos A. Dimopoulos, Greger Larson, and Laurent A. F. Frantz Abstract Starting with dogs, over 15,000 years ago, the domestication of animals has been central in the development of modern societies. Because of its importance for a range of disciplines – including archaeology, biology and the humanities – domestication has been studied extensively. This chapter reviews how the field of paleogenomics has revolutionised, and will continue to revolutionise, our under- standing of animal domestication. We discuss how the recovery of ancient DNA from archaeological remains is allowing researchers to overcome inherent shortcom- ings arising from the analysis of modern DNA alone. In particular, we show how DNA, extracted from ancient substrates, has proven to be a crucial source of information to reconstruct the geographic and temporal origin of domestic species. We also discuss how ancient DNA is being used by geneticists and archaeologists to directly observe evolutionary changes linked to artificial and natural selection to generate a richer understanding of this fascinating process. Keywords Ancient DNA · Archaeology · Domestication · Entomology · Evolution · Genomics · Zoology E. K. Irving-Pease (*) · H. Ryan · A. Jamieson · E. A. Dimopoulos · G. Larson The Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and History of Art, University of Oxford, Oxford, UK e-mail: [email protected] L. A. F. Frantz (*) The Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and History of Art, University of Oxford, Oxford, UK School of Biological and Chemical Sciences, Queen Mary University of London, London, UK e-mail: [email protected] Charlotte Lindqvist and Om P. -
Genetics and Animal Domestication: New Windows on an Elusive Process K
Journal of Zoology. Print ISSN 0952-8369 Genetics and animal domestication: new windows on an elusive process K. Dobney1 & G. Larson2 1 Department of Archaeology, University of Durham, Durham, UK 2 Department of Zoology, Henry Wellcome Ancient Biomolecules Centre, University of Oxford, UK Keywords Abstract domestication; genetics; phylogeography; molecular clocks; paedomorphosis. Domesticated animals are universally familiar. How, when, where and why they became domesticated is less well understood. The genetic revolution of the past few Correspondence decades has facilitated novel insights into a field that previously was principally the Greger Larson, Department of Zoology, domain of archaeozoologists. Although some of the conclusions drawn from Henry Wellcome Ancient Biomolecules genetic data have proved to be contentious, many studies have significantly altered Centre, University of Oxford, South Parks or refined our understanding of past human animal relationships. This review Road OX1 3PS, UK seeks not only to discuss the wider concerns and ramifications of genetic Email: [email protected] approaches to the study of animal domestication but also to provide a broader theoretical framework for understanding the process itself. More specifically, we Received 6 July 2005; accepted 8 September discuss issues related to the terminology associated with domestication, the 2005 possibility of domestication genes, and the promise and problems of genetics to answer the fundamental questions associated with domestication. doi:10.1111/j.1469-7998.2006.00042.x Introduction Defining domestication Over the past 10 000 years, human history has been wholly Terminology typically used in domestication studies, including transformed by the domestication of plants and animals. the word ‘domestication’ itself, is often confusing and poorly Although the term ‘domestic animal’ has universal meaning, defined. -
A Growing Problem Selective Breeding in the Chicken Industry
A GROWING PROBLEM SELECTIVE BREEDING IN THE CHICKEN INDUSTRY: THE CASE FOR SLOWER GROWTH A GROWING PROBLEM SELECTIVE BREEDING IN THE CHICKEN INDUSTRY: THE CASE FOR SLOWER GROWTH TABLE OF CONTENTS EXECUTIVE SUMMARY ............................................................................. 2 SELECTIVE BREEDING FOR FAST AND EXCESSIVE GROWTH ......................... 3 Welfare Costs ................................................................................. 5 Labored Movement ................................................................... 6 Chronic Hunger for Breeding Birds ................................................. 8 Compromised Physiological Function .............................................. 9 INTERACTION BETWEEN GROWTH AND LIVING CONDITIONS ...................... 10 Human Health Concerns ................................................................. 11 Antibiotic Resistance................................................................. 11 Diseases ............................................................................... 13 MOVING TO SLOWER GROWTH ............................................................... 14 REFERENCES ....................................................................................... 16 COVER PHOTO: CHRISTINE MORRISSEY EXECUTIVE SUMMARY In an age when the horrors of factory farming are becoming more well-known and people are increasingly interested in where their food comes from, few might be surprised that factory farmed chickens raised for their meat—sometimes called “broiler” -
Rethinking Dog Domestication by Integrating Genetics, Archeology, and Biogeography
Rethinking dog domestication by integrating genetics, archeology, and biogeography Greger Larsona,1, Elinor K. Karlssonb,c, Angela Perria, Matthew T. Webster d,SimonY.W.Hoe, Joris Petersf, Peter W. Stahl g, Philip J. Piperh,i, Frode Lingaasj, Merete Fredholmk, Kenine E. Comstockl, Jaime F. Modianom,n, Claude Schellingo, Alexander I. Agoulnikp, Peter A. Leegwaterq, Keith Dobneyr, Jean-Denis Vignes, Carles Vilàt, Leif Anderssond,u, and Kerstin Lindblad-Tohb,d aDurham Evolution and Ancient DNA, Department of Archaeology, University of Durham, Durham DH1 3LE, United Kingdom; bBroad Institute of MIT and Harvard, Cambridge MA 02142; cFaculty of Arts and Sciences Center for Systems Biology, Harvard University, Cambridge MA 02138; dScience for Life Laboratory Uppsala, Department of Medical Biochemistry and Microbiology, Uppsala University, SE-751 23 Uppsala, Sweden; eSchool of Biological Sciences, University of Sydney, Sydney NSW 2006, Australia; fVeterinary Sciences Department, Institute of Palaeoanatomy, Domestication Research and the History of Veterinary Medicine, Ludwig-Maximilian University, 80539 Munich, Germany; gDepartment of Anthropology, University of Victoria, Victoria, BC, Canada V8W 2Y2; hSchool of Archaeology and Anthropology, Australian National University, Canberra, Australian Capital Territory 200, Australia; iArchaeological Studies Program, University of the Philippines, Diliman, 1101, Quezon City, Philippines; jDepartment of Basic Sciences and Aquatic Medicine, Division of Genetics, Norwegian School of Veterinary Science, -
Detecting Sex and Selection in Ancient Cattle Remains Using
!! ! " # $ %&'%(&)% $ * +(+%(''()%(& , - ,,, .(%)/)&% ! " # $% % %&%%' ' ' ( )* + ) , -)$% %) , , . / , ( ). ) 0!1)22 ) )3,40154 566!501$ 52) . %%%% + + + ). ++ ' )* 2$0 ' 7 + )" + + ' ' ). + 4 ' ' ' '+ / + ) * ' + '' ) 5 8 ' 9 . 3 '' : + $%%%%51%%%% + + ).9 ,( + + '8 ' ' ) * + 7 )3 ,( + + + ' )* ' + +' ' 4 ) .,( 8 ! !" ! # !$ %&'( ! !)*+,-. ! ;-, $% % 3,, 26 52$ ! 3,40154 566!501$ 52 & &&& 5 $<$2 = &>> )7)> ? @ & &&& 5 $<$2 A Till mamma Art work on front page by Lotta Tomasson List of Papers This thesis is based on the following papers, which are referred to in the text by their Roman numerals. I Svensson, E.M., Axelsson, E., Vretemark, M., Makowiecki, D., Gilbert, M.T.P., Willerslev, E., Götherström, A. Insights into Y chromosomal genetic variation and effective population size in the extinct European aurochs Bos primigenius. Manuscript II Svensson, E., Götherström, A., (2008) Temporal fluctuations of Y-chromosomal variation in Bos taurus. Biology Letters, 4(6):752-754 III Svensson, E.M., Götherström, A., Vretemark, M. (2008) A DNA test for sex identification in cattle confirms osteometric results. Journal of Archaeological Science 35(4):942-946 IV Telldahl, Y., Svensson, E.M., Götherström, A., Storå, J. -
PLANT BREEDING David Luckett and Gerald Halloran ______
CHAPTER 4 _____________________________________________________________________ PLANT BREEDING David Luckett and Gerald Halloran _____________________________________________________________________ WHAT IS PLANT BREEDING AND WHY DO IT? Plant breeding, or crop genetic improvement, is the production of new, improved crop varieties for use by farmers. The new variety may have higher yield, improved grain quality, increased disease resistance, or be less prone to lodging. Ideally, it will have a new combination of attributes which are significantly better than the varieties already available. The new variety will be a new combination of genes which the plant breeder has put together from those available in the gene pool of that species. It may contain only genes already existing in other varieties of the same crop, or it may contain genes from other distant plant relatives, or genes from unrelated organisms inserted by biotechnological means. The breeder will have employed a range of techniques to produce the new variety. The new gene combination will have been chosen after the breeder first created, and then eliminated, thousands of others of poorer performance. This chapter is concerned with describing some of the more important genetic principles that define how plant breeding occurs and the techniques breeders use. Plant breeding is time-consuming and costly. It typically takes more than ten years for a variety to proceed from the initial breeding stages through to commercial release. An established breeding program with clear aims and reasonable resources will produce a new variety regularly, every couple of years or so. Each variety will be an incremental improvement upon older varieties or may, in rarer circumstances, be a quantum improvement due to some novel gene, the use of some new technique or a response to a new pest or disease. -
Animal Domestication in the Era of Ancient Genomics Laurent Frantz, Daniel Bradley, Greger Larson, Ludovic Orlando
Animal domestication in the era of ancient genomics Laurent Frantz, Daniel Bradley, Greger Larson, Ludovic Orlando To cite this version: Laurent Frantz, Daniel Bradley, Greger Larson, Ludovic Orlando. Animal domestication in the era of ancient genomics. Nature Reviews Genetics, Nature Publishing Group, 2020, 21 (8), pp.449-460. 10.1038/s41576-020-0225-0. hal-03030302 HAL Id: hal-03030302 https://hal.archives-ouvertes.fr/hal-03030302 Submitted on 30 Nov 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Animal domestication in the era of ancient genomics Laurent A. F. Frantz1†, Daniel G. Bradley2, Greger Larson3 and Ludovic Orlando4,5† 1 School of Biological and Chemical Sciences, Queen Mary University of London, London, UK. 2 Smurfit Institute of Genetics, Trinity College Dublin, Dublin, Ireland 3 The Palaeogenomics & Bio-Archaeology Research Network, Research Laboratory for Archaeology and History of Art, The University of Oxford, Oxford, UK. 4 Laboratoire d’Anthropobiologie Moléculaire et d’Imagerie de Synthèse, CNRS UMR 5288, Université de Toulouse, -
Born to Run: EVOLUTION: Variation and Natural Selection Artificial Selection Lab Two Versions of This Lesson by Theodore Garland, Jr., Ph.D
Born to Run: EVOLUTION: Variation and Natural Selection Artificial Selection Lab Two versions of this lesson by Theodore Garland, Jr., Ph.D. have been tested with 7th (University of California, Riverside) grade students by the second and Tricia Radojcic, Ph.D. author, and it has been used (Bella Vista Middle School, Murrieta, California) once at the Riverside STEM academy. SYNOPSIS Students are introduced to the field of experimental evolution by evaluating skeletal changes in mice that have been artificially selected over many generations for the behavioral trait of voluntary exercise wheel running. A video presentation by Dr. Theodore Garland, Jr. of the University of California, Riverside discusses the experimental design and presents the results of the collaborative research on the structural, metabolic, and neural changes in the selected lines of mice. In an inquiry-based activity, students develop hypotheses about the skeletal changes that might occur in the legs of the selected mouse populations and design an investigation using measurements taken from photographed femurs (thigh bones) of mice from both selected lines and non- selected control lines. PRINCIPAL CONCEPT Experimental evolution allows the processes of evolution to be modeled and observed in the laboratory with real organisms. ASSOCIATED CONCEPTS 1. A population of animals can be changed dramatically by selective breeding over successive generations. 2. Selective breeding for a behavioral trait also causes changes in neurobiology, body structures (e.g., limb bones), metabolism, and biochemistry. 3. Variation in behavioral traits and any other associated biological traits can be passed on from parents to their offspring. ASSESSABLE OBJECTIVES Students will.... 1.