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Nitroso and Nitro Compounds 11/22/2014 Part 1
Hai Dao Baran Group Meeting Nitroso and Nitro Compounds 11/22/2014 Part 1. Introduction Nitro Compounds O D(Kcal/mol) d (Å) NO NO+ Ph NO Ph N cellular signaling 2 N O N O OH CH3−NO 40 1.48 molecule in mammals a nitro compound a nitronic acid nitric oxide b.p = 100 oC (8 mm) o CH3−NO2 57 1.47 nitrosonium m.p = 84 C ion (pKa = 2−6) CH3−NH2 79 1.47 IR: υ(N=O): 1621-1539 cm-1 CH3−I 56 Nitro group is an EWG (both −I and −M) Reaction Modes Nitro group is a "sink" of electron Nitroso vs. olefin: e Diels-Alder reaction: as dienophiles Nu O NO − NO Ene reaction 3 2 2 NO + N R h 2 O e Cope rearrangement υ O O Nu R2 N N N R1 N Nitroso vs. carbonyl R1 O O O O O N O O hυ Nucleophilic addition [O] N R2 R O O R3 Other reaction modes nitrite Radical addition high temp low temp nitrolium EWG [H] ion brown color less ion Redox reaction Photochemical reaction Nitroso Compounds (C-Nitroso Compounds) R2 R1 O R3 R1 Synthesis of C-Nitroso Compounds 2 O R1 R 2 N R3 3 R 3 N R N R N 3 + R2 2 R N O With NO sources: NaNO2/HCl, NOBF4, NOCl, NOSbF6, RONO... 1 R O R R1 O Substitution trans-dimer monomer: blue color cis-dimer colorless colorless R R NOBF OH 4 - R = OH, OMe, Me, NR2, NHR N R2 R3 = H or NaNO /HCl - para-selectivity ΔG = 10 Kcal mol-1 Me 2 Me R1 NO oxime R rate determining step Blue color: n π∗ absorption band 630-790 nm IR: υ(N=O): 1621-1539 cm-1, dimer υ(N−O): 1300 (cis), 1200 (trans) cm-1 + 1 Me H NMR (α-C-H) δ = 4 ppm: nitroso is an EWG ON H 3 Kochi et al. -
2016 Zaffagnini Trost BBA.Pdf
Biochimica et Biophysica Acta 1864 (2016) 952–966 Contents lists available at ScienceDirect Biochimica et Biophysica Acta journal homepage: www.elsevier.com/locate/bbapap Protein S-nitrosylation in photosynthetic organisms: A comprehensive overview with future perspectives☆ M. Zaffagnini a,1,M.DeMiab,1, S. Morisse b, N. Di Giacinto a,C.H.Marchandb,A.Maesb, S.D. Lemaire b,⁎,P.Trosta,⁎ a Laboratory of Plant Redox Biology, Department of Pharmacy and Biotechnology, University of Bologna, 40126 Bologna, Italy b Sorbonne Universités, UPMC Univ Paris 06, Centre National de la Recherche Scientifique, UMR8226, Laboratoire de Biologie Moléculaire et Cellulaire and des Eucaryotes, Institut de Biologie Physico-Chimique, 75005 Paris, France article info abstract Article history: Background: The free radical nitric oxide (NO) and derivative reactive nitrogen species (RNS) play essential roles Received 16 November 2015 in cellular redox regulation mainly through protein S-nitrosylation, a redox post-translational modification in Received in revised form 15 January 2016 which specific cysteines are converted to nitrosothiols. Accepted 4 February 2016 Scope of view: This review aims to discuss the current state of knowledge, as well as future perspectives, regarding Available online 6 February 2016 protein S-nitrosylation in photosynthetic organisms. Major conclusions: NO, synthesized by plants from different sources (nitrite, arginine), provides directly or indi- Keywords: rectly the nitroso moiety of nitrosothiols. Biosynthesis, reactivity and scavenging systems of NO/RNS, determine Cysteine Denitrosylation the NO-based signaling including the rate of protein nitrosylation. Denitrosylation reactions compete with Nitric oxide nitrosylation in setting the levels of nitrosylated proteins in vivo. Nitrosothiols General significance: Based on a combination of proteomic, biochemical and genetic approaches, protein Redox signaling nitrosylation is emerging as a pervasive player in cell signaling networks. -
ATSDR Case Studies in Environmental Medicine Nitrate/Nitrite Toxicity
ATSDR Case Studies in Environmental Medicine Nitrate/Nitrite Toxicity Agency for Toxic Substances and Disease Registry Case Studies in Environmental Medicine (CSEM) Nitrate/Nitrite Toxicity Course: WB2342 CE Original Date: December 5, 2013 CE Expiration Date: December 5, 2015 Key • Nitrate toxicity is a preventable cause of Concepts methemoglobinemia. • Infants younger than 4 months of age are at particular risk of nitrate toxicity from contaminated well water. • The widespread use of nitrate fertilizers increases the risk of well-water contamination in rural areas. About This This educational case study document is one in a series of and Other self-instructional modules designed to increase the primary Case Studies care provider’s knowledge of hazardous substances in the in environment and to promote the adoption of medical Environmen- practices that aid in the evaluation and care of potentially tal Medicine exposed patients. The complete series of Case Studies in Environmental Medicine is located on the ATSDR Web site at URL: http://www.atsdr.cdc.gov/csem/csem.html In addition, the downloadable PDF version of this educational series and other environmental medicine materials provides content in an electronic, printable format. Acknowledgements We gratefully acknowledge the work of the medical writers, editors, and reviewers in producing this educational resource. Contributors to this version of the Case Study in Environmental Medicine are listed below. Please Note: Each content expert for this case study has indicated that there is no conflict of interest that would bias the case study content. CDC/ATSDR Author(s): Kim Gehle MD, MPH CDC/ATSDR Planners: Charlton Coles, Ph.D.; Kimberly Gehle, MD; Sharon L. -
Mechanisms of Nitric Oxide Reactions Mediated by Biologically Relevant Metal Centers
Struct Bond (2014) 154: 99–136 DOI: 10.1007/430_2013_117 # Springer-Verlag Berlin Heidelberg 2013 Published online: 5 October 2013 Mechanisms of Nitric Oxide Reactions Mediated by Biologically Relevant Metal Centers Peter C. Ford, Jose Clayston Melo Pereira, and Katrina M. Miranda Abstract Here, we present an overview of mechanisms relevant to the formation and several key reactions of nitric oxide (nitrogen monoxide) complexes with biologically relevant metal centers. The focus will be largely on iron and copper complexes. We will discuss the applications of both thermal and photochemical methodologies for investigating such reactions quantitatively. Keywords Copper Á Heme models Á Hemes Á Iron Á Metalloproteins Á Nitric oxide Contents 1 Introduction .................................................................................. 101 2 Metal-Nitrosyl Bonding ..................................................................... 101 3 How Does the Coordinated Nitrosyl Affect the Metal Center? .. .. .. .. .. .. .. .. .. .. .. 104 4 The Formation and Decay of Metal Nitrosyls ............................................. 107 4.1 Some General Considerations ........................................................ 107 4.2 Rates of NO Reactions with Hemes and Heme Models ............................. 110 4.3 Mechanistic Studies of NO “On” and “Off” Reactions with Hemes and Heme Models ................................................................................. 115 4.4 Non-Heme Iron Complexes .......................................................... -
Systems Biology Reveals Reprogramming of the S-Nitroso
www.nature.com/scientificreports OPEN Systems biology reveals reprogramming of the S‑nitroso‑proteome in the cortical and striatal regions of mice during aging process Maryam Kartawy, Igor Khaliulin & Haitham Amal* Cell aging depends on the rate of cumulative oxidative and nitrosative damage to DNA and proteins. Accumulated data indicate the involvement of protein S‑nitrosylation (SNO), the nitric oxide (NO)-mediated posttranslational modifcation (PTM) of cysteine thiols, in diferent brain disorders. However, the changes and involvement of SNO in aging including the development of the organism from juvenile to adult state is still unknown. In this study, using the state‑of‑the‑ art mass spectrometry technology to identify S‑nitrosylated proteins combined with large‑scale computational biology, we tested the S‑nitroso‑proteome in juvenile and adult mice in both cortical and striatal regions. We found reprogramming of the S‑nitroso‑proteome in adult mice of both cortex and striatum regions. Signifcant biological processes and protein–protein clusters associated with synaptic and neuronal terms were enriched in adult mice. Extensive quantitative analysis revealed a large set of potentially pathological proteins that were signifcantly upregulated in adult mice. Our approach, combined with large scale computational biology allowed us to perform a system‑level characterization and identifcation of the key proteins and biological processes that can serve as drug targets for aging and brain disorders in future studies. Nitric oxide (NO) is produced in diferent organs and tissues, including the central and peripheral nervous sys- tem, and is one of the most important signaling molecules in the body1,2. At low concentrations, it participates in cell signaling and may have therapeutic value for brain injury 3. -
C-Nitroso-Substituted Ligands of Poly(ADP-Ribose) Polymerase (Zinc Rmger/Drug-Induced Cell Death) WILLIAM G
Proc. Nati. Acad. Sci. USA Vol. 89, pp. 7703-7707, August 1992 Pharmacology Induction of endonuclease-mediated apoptosis in tumor cells by C-nitroso-substituted ligands of poly(ADP-ribose) polymerase (zinc rmger/drug-induced cell death) WILLIAM G. RICE*t, CHRISTOPHER D. HILLYERt, BRAD HARTEN*, CATHERINE A. SCHAEFFER*, MARK DORMINY*, DIXON A. LACKEY III*, EVA KIRSTEN§, JEROME MENDELEYEV§, KALMAN G. BUKI§, ALAEDDIN HAKAM§, AND ERNEST KUNt§ *Division of Hematology and Oncology, Department of Pediatrics, and tDepartment of Pathology and Laboratory of Medicine and the Winship Cancer Center, Emory University School of Medicine, Atlanta, GA 30322; and §Laboratory for Environmental Toxicology and Chemistry, The Romberg Tiburon Center, San Francisco State University, P.O. Box 855, Tiburon, CA 94920 Communicated by John Baldeschwieler, May 19, 1992 ABSTRACT 6-Nitroso-1,2-benzopyrone and 3-ni- Assays. For cell proliferation tests, cells were cultured in trosobenzamide, two C-nitroso compounds that inactivate the 96-well tissue culture plates at 3 x 103 cells per well (250-gl eukaryotic nuclear protein poly(ADP-ribose) polymerase total volume per well) for 2 hr (or the indicated length oftime) [NAD+:poly(adenosine diphosphate D-ribose) ADP-D-ribosyl- in the absence or presence of various concentrations of transferase, ADPRT, EC 2.4.2.30] at one zinc-ringer site, NOBA or NOBP; thereafter 0.5 ,uCi of [methyl-3H]thymidine completely suppressed the proliferation of leukemic and other (85 Ci/mmol; 1 Ci = 37 GBq) was added per well and its malignant human cells and subsequently produced cell death. incorporation into DNA following an 18-hr incubation was Tumoricidal concentrations of the drugs were relatively harm- determined radiochemically (6). -
Some Chemistry of Organometallic Nitrosyl Complexes
SOME CHEMISTRY OF ORGANOMETALLIC NITROSYL COMPLEXES Cr, Mo and W By TEEN TEEN CHIN B.Sc, The University of New Brunswick, 1986 A THESIS SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF MASTER OF SCIENCE in THE FACULTY OF GRADUATE STUDIES (Department of Chemistry) We accept this thesis as conforming to the required standard THE UNIVERSITY OF BRITISH COLUMBIA January 1989 • Teen Teen Chin, 1989 In presenting this thesis in partial fulfilment of the requirements for an advanced degree at the University of British Columbia, I agree that the Library shall make it freely available for reference and study. I further agree that permission for extensive copying of this thesis for scholarly purposes may be granted by the head of my department or by his or her representatives. It is understood that copying or publication of this thesis for financial gain shall not be allowed without my written permission. Department of CH£MlST&y The University of British Columbia Vancouver, Canada Date 06/*'//9#9 DE-6 (2/88) ii Abstract While cationic nitrosyl complexes containing the / 5 5 "Cp M(NO) " (Cp' = -C H (Cp) or r? -C Me (Cp*) ; M = Cr, Mo 2 »7 5 5 5 5 and W) fragment are well-known, cationic nitrosyl complexes containing the "Cp'MfNO)" fragment are rarely encountered. The preparation of a series of cationic nitrosyl complexes containing the latter fragment resulting from the treatment of [Cp'M(NO)X ] (M= Mo or W; X = I, Br or CI; m = ; n = or m n 2 1 2; M = Cr; X = I; m = 1; n = 2) with nitrosonium, [N0]+, or + silver(I), [Ag] , salts in CH3CN is described. -
Nitric Oxide-Dependent Posttranslational Modification in Plants: an Update
Int. J. Mol. Sci. 2012, 13, 15193-15208; doi:10.3390/ijms131115193 OPEN ACCESS International Journal of Molecular Sciences ISSN 1422-0067 www.mdpi.com/journal/ijms Review Nitric Oxide-Dependent Posttranslational Modification in Plants: An Update Jeremy Astier and Christian Lindermayr Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, Ingolstädter Landstr. 1, 85764 Neuherberg, Germany; E-Mails: [email protected] (J.A.); [email protected] (C.L.); Tel.: +49-89-3187-2129 (J.A.); +49-89-3187-2285 (C.L.); Fax: +49-89-3187-3383 (J.A.); +49-89-3187-3383 (C.L.) Received: 6 September 2012; in revised form: 16 October 2012 / Accepted: 6 November 2012 / Published: 16 November 2012 Abstract: Nitric oxide (NO) has been demonstrated as an essential regulator of several physiological processes in plants. The understanding of the molecular mechanism underlying its critical role constitutes a major field of research. NO can exert its biological function through different ways, such as the modulation of gene expression, the mobilization of second messengers, or interplays with protein kinases. Besides this signaling events, NO can be responsible of the posttranslational modifications (PTM) of target proteins. Several modifications have been identified so far, whereas metal nitrosylation, the tyrosine nitration and the S-nitrosylation can be considered as the main ones. Recent data demonstrate that these PTM are involved in the control of a wide range of physiological processes in plants, such as the plant immune system. However, a great deal of effort is still necessary to pinpoint the role of each PTM in plant physiology. Taken together, these new advances in proteomic research provide a better comprehension of the role of NO in plant signaling. -
N-Nitroso Compounds in the Diet
Mutation Research 443Ž. 1999 129±138 www.elsevier.comrlocatergentox Community address: www.elsevier.comrlocatermutres N-Nitroso compounds in the diet William Lijinsky 11398 High Hay DriÕe, Columbia, MD 21044, USA Received 7 October 1998; received in revised form 12 February 1999; accepted 12 February 1999 Abstract N-Nitroso compounds were known almost 40 years ago to be present in food treated with sodium nitrite, which made fish meal hepatotoxic to animals through formation of nitrosodimethylamineŽ. NDMA . Since that time, N-nitroso compounds have been shown in animal experiments to be the most broadly acting and the most potent group of carcinogens. The key role of nitrite and nitrogen oxides in forming N-nitroso compounds by interaction with secondary and tertiary amino compounds has led to the examination worldwide of foods for the presence of N-nitroso compounds, which have been found almost exclusively in those foods containing nitrite or which have become exposed to nitrogen oxides. Among these are cured meats, especially baconÐand especially when cooked; concentrations of 100 mgkgy1 have been found or, more usually, near 10 mgkgy1. This would correspond to consumption of 1 mg of NDMA in a 100-g portion. Much higher concentrations of NDMAŽ. but lower ones of other nitrosamines have been found in Japanese smoked and cured fish Ž more than 100 mg kgy1. Beer is one source of NDMA, in which as much as 70 mg ly1 has been reported in some types of German beer, although usual levels are much lowerŽ 10 or 5 mg ly1. ; this could mean a considerable intake for a heavy beer drinker of several liters per day. -
A Mitochondria-Targeted S-Nitrosothiol Modulates Respiration, Nitrosates Thiols, and Protects Against Ischemia-Reperfusion Injury
A mitochondria-targeted S-nitrosothiol modulates respiration, nitrosates thiols, and protects against ischemia-reperfusion injury Tracy A. Primea, Frances H. Blaikieb, Cameron Evansb, Sergiy M. Nadtochiyc, Andrew M. Jamesa, Christina C. Dahma, Dario A. Vitturid, Rakesh P. Pateld, C. Robin Hileye, Irina Abakumovaa, Raquel Requejoa, Edward T. Chouchania, Thomas R. Hurda, John F. Garveyf, Cormac T. Taylorf, Paul S. Brookesc, Robin A. J. Smithb, and Michael P. Murphya,1 aMRC Mitochondrial Biology Unit, Hills Road, Cambridge CB2 0XY, United Kingdom; bDepartment of Chemistry, University of Otago, P. O. Box 56, Dunedin 9054, New Zealand; cDepartment of Anesthesiology, University of Rochester Medical Center, 601 Elmwood Avenue, Rochester, NY 14642; dDepartment of Pathology and Center for Free Radical Biology, University of Alabama at Birmingham, 901 19th Street South, Birmingham, AL 35294; eDepartment of Pharmacology, University of Cambridge, Tennis Court Road, Cambridge CB2 1PD, United Kingdom; and fConway Institute, University College, Dublin, Dublin 4, Ireland Edited by Salvador Moncada, University College London, London, United Kingdom, and approved May 1, 2009 (received for review March 25, 2009) Nitric oxide (NO•) competitively inhibits oxygen consumption by phonium (TPP) cationic moiety, which has been used to target mitochondria at cytochrome c oxidase and S-nitrosates thiol pro- molecules to mitochondria both in vitro and in vivo (11). The teins. We developed mitochondria-targeted S-nitrosothiols (MitoS- delocalized positive charge and lipophilic surface enables TPP NOs) that selectively modulate and protect mitochondrial function. cations to cross biological membranes rapidly without a require- The exemplar MitoSNO1, produced by covalently linking an S- ment for a carrier protein, and to accumulate several hundred- nitrosothiol to the lipophilic triphenylphosphonium cation, was fold in energized mitochondria in vivo driven by the membrane rapidly and extensively accumulated within mitochondria, driven potential (⌬) (12). -
Mini Review Strategies for Profiling Native S-Nitrosylation
Mini Review Strategies for Profiling Native S-Nitrosylation Jaimeen D. Majmudar, Brent R. Martin Department of Chemistry, University of Michigan, 930 N. University Ave., Ann Arbor, MI 48109 Received 10 May 2013; accepted 24 June 2013 Published online 5 July 2013 in Wiley Online Library (wileyonlinelibrary.com). DOI 10.1002/bip.22342 ABSTRACT: of oxidative regulation. VC 2013 Wiley Periodicals, Inc. Biopolymers 101: 173–179, 2014. Cysteine is a uniquely reactive amino acid, capable of Keywords: nitrosylation; post-translational modifica- undergoing both nucleophlilic and oxidative post- tion; nitric oxide translational modifications. One such oxidation reaction involves the covalent modification of cysteine via the gas- eous second messenger nitric oxide (NO), termed S-nitro- This article was originally published online as an accepted pre- print. The “Published Online” date corresponds to the preprint sylation (SNO). This dynamic post-translational version. You can request a copy of the preprint by emailing modification is involved in the redox regulation of pro- the Biopolymers editorial office at [email protected] teins across all phylogenic kingdoms. In mammals, calcium-dependent activation of NO synthase triggers the local release of NO, which activates nearby guanylyl INTRODUCTION cyclases and cGMP-dependent pathways. In parallel, dif- ulfur is the lightest element that can produce stable fusible NO can locally modify redox active cellular thiols, exceptions to the octet rule because of the presence functionally modulating many redox sensitive enzymes. of “d” orbitals. Typical cysteine residues in proteins 1 Aberrant SNO is implicated in the pathology of many have a side chain pKa values of 8.0, and thus 10% of cysteine thiols are in their reactive thiolate form at diseases, including neurodegeneration, inflammation, S physiological pH. -
NITROSYLMETALLOPORPHYRIN COMPLEXES AS MODELS for /C URED MEAT
NITROSYLMETALLOPORPHYRIN COMPLEXES AS MODELS FOr /c URED MEAT PIGMENTS s' A Thesis Presented to the University of Surrey for the Degree of Doctor of Philosophy in the Faculty of Chemical and Biological Sciences hy Russell Martin Thompson, B.Sc. The Joseph Kenyon Research Laboratories, Department of Chemistry, University of Surrey, Guildford, SURREY GU2 5XH England September 1988 5 - <=\o5 3 ci ProQuest Number: 10804592 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. In the unlikely event that the author did not send a com plete manuscript and there are missing pages, these will be noted. Also, if material had to be removed, a note will indicate the deletion. uest ProQuest 10804592 Published by ProQuest LLC(2018). Copyright of the Dissertation is held by the Author. All rights reserved. This work is protected against unauthorized copying under Title 17, United States C ode Microform Edition © ProQuest LLC. ProQuest LLC. 789 East Eisenhower Parkway P.O. Box 1346 Ann Arbor, Ml 48106- 1346 ABSTRACT A range of nitrosylmetalloporphyrin complexes, M(porph)NO [M = Fe, Co; porph = TPP, OEP, TpivPP], some labelled with 1 5NO, has been synthesised and investigated as structural and spectroscopic models of the cured meat pigment, nitrosylmyoglobin. The nitrosylmetalloporphyrins were found to be unstable in solution (and some in the solid state) with respect to loss or further reaction of the nitrosyl ligand. The diamagnetic cobalt (III) porphyrin^nitrosyIs and a range of other square pyramidal complexes of cobalt(III) with an apical nitrosyl ligand have been further investigated by 15 59 N and Co NMR spectroscopy to establish whether the CoNO group is bent or linear and to study nephelauxetic and spectrochemical effects at the metal.