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Cuivre Bryophytes
Trip Report for: Cuivre River State Park Species Count: 335 Date: Multiple Visits Lincoln County Agency: MODNR Location: Lincoln Hills - Bryophytes Participants: Bryophytes from Natural Resource Inventory Database Bryophyte List from NRIDS and Bruce Schuette Species Name (Synonym) Common Name Family COFC COFW Acarospora unknown Identified only to Genus Acarosporaceae Lichen Acrocordia megalospora a lichen Monoblastiaceae Lichen Amandinea dakotensis a button lichen (crustose) Physiaceae Lichen Amandinea polyspora a button lichen (crustose) Physiaceae Lichen Amandinea punctata a lichen Physiaceae Lichen Amanita citrina Citron Amanita Amanitaceae Fungi Amanita fulva Tawny Gresette Amanitaceae Fungi Amanita vaginata Grisette Amanitaceae Fungi Amblystegium varium common willow moss Amblystegiaceae Moss Anisomeridium biforme a lichen Monoblastiaceae Lichen Anisomeridium polypori a crustose lichen Monoblastiaceae Lichen Anomodon attenuatus common tree apron moss Anomodontaceae Moss Anomodon minor tree apron moss Anomodontaceae Moss Anomodon rostratus velvet tree apron moss Anomodontaceae Moss Armillaria tabescens Ringless Honey Mushroom Tricholomataceae Fungi Arthonia caesia a lichen Arthoniaceae Lichen Arthonia punctiformis a lichen Arthoniaceae Lichen Arthonia rubella a lichen Arthoniaceae Lichen Arthothelium spectabile a lichen Uncertain Lichen Arthothelium taediosum a lichen Uncertain Lichen Aspicilia caesiocinerea a lichen Hymeneliaceae Lichen Aspicilia cinerea a lichen Hymeneliaceae Lichen Aspicilia contorta a lichen Hymeneliaceae Lichen -
Pannariaceae Generic Taxonomy LL Ver. 27.9.2013.Docx
http://www.diva-portal.org Preprint This is the submitted version of a paper published in The Lichenologist. Citation for the original published paper (version of record): Ekman, S. (2014) Extended phylogeny and a revised generic classification of the Pannariaceae (Peltigerales, Ascomycota). The Lichenologist, 46: 627-656 http://dx.doi.org/10.1017/S002428291400019X Access to the published version may require subscription. N.B. When citing this work, cite the original published paper. Permanent link to this version: http://urn.kb.se/resolve?urn=urn:nbn:se:nrm:diva-943 Extended phylogeny and a revised generic classification of the Pannariaceae (Peltigerales, Ascomycota) Stefan EKMAN, Mats WEDIN, Louise LINDBLOM & Per M. JØRGENSEN S. Ekman (corresponding author): Museum of Evolution, Uppsala University, Norbyvägen 16, SE –75236 Uppsala, Sweden. Email: [email protected] M. Wedin: Dept. of Botany, Swedish Museum of Natural History, Box 50007, SE –10405 Stockholm, Sweden. L. Lindblom and P. M. Jørgensen: Dept. of Natural History, University Museum of Bergen, Box 7800, NO –5020 Bergen, Norway. Abstract: We estimated phylogeny in the lichen-forming ascomycete family Pannariaceae. We specifically modelled spatial (across-site) heterogeneity in nucleotide frequencies, as models not incorporating this heterogeneity were found to be inadequate for our data. Model adequacy was measured here as the ability of the model to reconstruct nucleotide diversity per site in the original sequence data. A potential non-orthologue in the internal transcribed spacer region (ITS) of Degelia plumbea was observed. We propose a revised generic classification for the Pannariaceae, accepting 30 genera, based on our phylogeny, previously published phylogenies, as well as morphological and chemical data available. -
Clementeana 13. 2011
CLEMENTEANA Boletín de la SOCIEDAD ESPAÑOLA DE LIQUENOLOGÍA (SEL) Ramalina clementeana nº 13. Barcelona, octubre 2011 Editor: N.L. Hladun Dept. Biología Vegetal (Botánica) Universidad de Barcelona Diagonal 643 08028 Barcelona, España tel: +34-3-403 98 65; fax: +34-3-411 28 42 Email: [email protected] Publicaciones de la Sociedad Española de Líquenologia Clementeana es el boletín oficial de la Sociedad Española de Liquenología (SEL). Se publica, un número Flora Liquenológica Ibérica por año, en castellano, con colaboraciones seleccionadas en inglés, francés o alemán. Las colaboraciones se deben hacer llegar al editor antes del 30 de noviembre, para que pueda ser publicado en el mes de enero. Se Vol 1: Peltigerales: Lobariaceae, Nephromataceae, Peltigeraceae. 2003. (BURGAZ, ruega que los escritos sean remitidos en soporte magnético de 3.5" en procesador de Word. A.R. & MARTÍNEZ). Vol 2: Ostropales: Graphidaceae ( CARBALLAL, R. & LÓPEZ DE SILANES, La SEL está abierta a todas aquellas personas interesadas en el estudio de los líquenes. La cuota es de 30 € año para los socios de número y de 15 € para los socios estudiantes, si el pago se realiza por domiciliación M.E:), Solorinellaceae (LÓPEZ DE SILANES, M.E:),; Gyalectales: Gyalectaceae. bancaria o en su defecto por transferencia, a la cc 2100-0555-35-0200632868 de la Caixa de Pensions, (PAZ-BERMÚDEZ, G.; LÓPEZ DE SILANES, M.E:; ÁLVAREZ, J.), 2004. oficina Central-Diagonal (Barcelona). Si se efectua mediante talón nominativo, a favor de la Sociedad Vol 3. Lecanorales: Bacidiaceae I. 2007. (LLOP, E.) Española de Liquenología, el importe será de 33 ó 18 debido a los gastos bancarios. -
An Evolving Phylogenetically Based Taxonomy of Lichens and Allied Fungi
Opuscula Philolichenum, 11: 4-10. 2012. *pdf available online 3January2012 via (http://sweetgum.nybg.org/philolichenum/) An evolving phylogenetically based taxonomy of lichens and allied fungi 1 BRENDAN P. HODKINSON ABSTRACT. – A taxonomic scheme for lichens and allied fungi that synthesizes scientific knowledge from a variety of sources is presented. The system put forth here is intended both (1) to provide a skeletal outline of the lichens and allied fungi that can be used as a provisional filing and databasing scheme by lichen herbarium/data managers and (2) to announce the online presence of an official taxonomy that will define the scope of the newly formed International Committee for the Nomenclature of Lichens and Allied Fungi (ICNLAF). The online version of the taxonomy presented here will continue to evolve along with our understanding of the organisms. Additionally, the subfamily Fissurinoideae Rivas Plata, Lücking and Lumbsch is elevated to the rank of family as Fissurinaceae. KEYWORDS. – higher-level taxonomy, lichen-forming fungi, lichenized fungi, phylogeny INTRODUCTION Traditionally, lichen herbaria have been arranged alphabetically, a scheme that stands in stark contrast to the phylogenetic scheme used by nearly all vascular plant herbaria. The justification typically given for this practice is that lichen taxonomy is too unstable to establish a reasonable system of classification. However, recent leaps forward in our understanding of the higher-level classification of fungi, driven primarily by the NSF-funded Assembling the Fungal Tree of Life (AFToL) project (Lutzoni et al. 2004), have caused the taxonomy of lichen-forming and allied fungi to increase significantly in stability. This is especially true within the class Lecanoromycetes, the main group of lichen-forming fungi (Miadlikowska et al. -
Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
Winter 2009 the California Lichen Society Seeks to Promote the Appreciation, Conservation and Study of Lichens
Bulletin of the California Lichen Society Volume 16 No. 2 Winter 2009 The California Lichen Society seeks to promote the appreciation, conservation and study of lichens. The interests of the Society include the entire western part of the continent, although the focus is on California. Dues categories (in $US per year): Student and fixed income - $10, Regular - $20 ($25 for foreign members), Family - $25, Sponsor and Libraries - $35, Donor - $50, Benefactor - $100 and Life Membership - $500 (one time) payable to the California Lichen Society, PO Box 7775 #21135 , San Francisco, California 94120-7775. Members receive the Bulletin and notices of meetings, field trips, lectures and workshops. Board Members of the California Lichen Society: President: Erin Martin, shastalichens gmail.com Vice President: Michelle Caisse Secretary: Patti Patterson Treasurer: Cheryl Beyer Editor: Tom Carlberg Committees of the California Lichen Society: Data Base: Bill Hill, chairperson Conservation: Eric Peterson, chairperson Education/Outreach: Erin Martin, chairperson Poster/Mini Guides: Janet Doell, chairperson Events/field trips/workshops: Judy Robertson, chairperson The Bulletin of the California Lichen Society (ISSN 1093-9148) is edited by Tom Carlberg, tcarlberg7 yahoo.com. The Bulletin has a review committee including Larry St. Clair, Shirley Tucker, William Sanders, and Richard Moe, and is produced by Eric Peterson. The Bulletin welcomes manuscripts on technical topics in lichenology relating to western North America and on conservation of the lichens, as well as news of lichenologists and their activities. The best way to submit manuscripts is by e-mail attachments or on a CD in the format of a major word processor (DOC or RTF preferred). -
Lichens and Lichenicolous Fungi of Yosemite National Park, California
North American Fungi Volume 8, Number 11, Pages 1-47 Published September 9, 2013 Lichens and Lichenicolous Fungi of Yosemite National Park, California M. Hutten1, U. Arup2, O. Breuss3, T. L. Esslinger4, A. M. Fryday5, K. Knudsen6, J. C. Lendemer7, C. Printzen8, H. T. Root9, M. Schultz10, J. Sheard11, T. Tønsberg12, and B. McCune9 1Lassen Volcanic National Park, P.O. Box 100, Mineral, CA 96063 USA. 2Botanical Museum, Lund University, Box 117, 221 00 Lund, Sweden 3Naturhistorisches Museum Wien, Botanische Abteilung, Burgring 7, A-1010 Wien, Austria 4Dept. of Biological Sciences #2715, P.O. Box 6050, North Dakota State University, Fargo ND 58108, U.S.A. 5Dept. of Plant Biology, Michigan State University, East Lansing, MI 48824, U.S.A. 6Dept. of Botany & Plant Sciences, University of California, Riverside, CA 92521, U.S.A. 7New York Botanical Garden, Bronx, NY 10458-5126, U.S.A. 8Abt. Botanik & Molek. Evol., Forschungsinstitut Senckenberg, Senckenberganlage 25, D-60325 Frankfurt am Main, Germany 9Dept. Botany and Plant Pathology, Oregon State University, Corvallis OR 97331, U.S.A. 10Biocenter Klein Flottbek, University of Hamburg, Ohnhorststr. 18, D-22609 Hamburg, Germany 11Dept. of Biology, University of Saskatchewan, 112 Science Place, Saskatoon, SK S7N 5E2, Canada 12Museum of Natural History, University of Bergen, Allégaten 41, N-5007 Bergen, Norway Hutten, M., U. Arup, O. Breuss, T. L. Esslinger, A. M. Fryday, K. Knudsen, J. C. Lendemer, C. Printzen, H. T. Root, M. Schultz, J. Sheard, T. Tønsberg, and B. McCune. 2013. Lichens and Lichenicolous Fungi of Yosemite National Park, California. North American Fungi 8(11): 1-47. -
Extended Phylogeny and a Revised Generic Classification of The
The Lichenologist 46(5): 627–656 (2014) 6 British Lichen Society, 2014 doi:10.1017/S002428291400019X Extended phylogeny and a revised generic classification of the Pannariaceae (Peltigerales, Ascomycota) Stefan EKMAN, Mats WEDIN, Louise LINDBLOM and Per M. JØRGENSEN Abstract: We estimated phylogeny in the lichen-forming ascomycete family Pannariaceae. We specif- ically modelled spatial (across-site) heterogeneity in nucleotide frequencies, as models not incorpo- rating this heterogeneity were found to be inadequate for our data. Model adequacy was measured here as the ability of the model to reconstruct nucleotide diversity per site in the original sequence data. A potential non-orthologue in the internal transcribed spacer region (ITS) of Degelia plumbea was observed. We propose a revised generic classification for the Pannariaceae, accepting 30 genera, based on our phylogeny, previously published phylogenies, as well as available morphological and chemical data. Four genera are established as new: Austroparmeliella (for the ‘Parmeliella’ lacerata group), Nebularia (for the ‘Parmeliella’ incrassata group), Nevesia (for ‘Fuscopannaria’ sampaiana), and Pectenia (for the ‘Degelia’ plumbea group). Two genera are reduced to synonymy, Moelleropsis (included in Fuscopannaria) and Santessoniella (non-monophyletic; type included in Psoroma). Lepido- collema, described as monotypic, is expanded to include 23 species, most of which have been treated in the ‘Parmeliella’ mariana group. Homothecium and Leightoniella, previously treated in the Collemataceae, are here referred to the Pannariaceae. We propose 41 new species-level combinations in the newly described and re-circumscribed genera mentioned above, as well as in Leciophysma and Psoroma. Key words: Collemataceae, lichen taxonomy, model adequacy, model selection Accepted for publication 13 March 2014 Introduction which include c. -
The Lichens of Italy – a Second Annotated Catalogue
The lichens of Italy – A second annotated catalogue Appello ai lichenologi italiani Prevedo di mandare in stampa la seconda versione annotata della Checklist dei Licheni d’Italia entro la prima metà del 2016. Di seguito trovate la lista dei 1188 lavori pubblicati dal 1993 ad oggi che sono riuscito a ‘digerire’ sino ad ora. Vi pregherei di confrontare questa lista con quella dei vostri lavori pubblicati dopo il 1993. Se trovate qualche lavoro non compreso nella lista che citi almeno una specie (anche comune) per l’Italia, vi sarei grato se poteste inviarmi il relativo pdf entro il 31 dicembre 2015 (se prima ancora meglio). grazie in anticipo! Pier Luigi Nimis Abramini V., Chiappetta D., Valcuvia-Passadore M. - 2008 - La flora lichenica della Valle del Lesina (Sondrio). - Not. Soc. Lich. Ital., 21: 25. Accattino E., Favero-Longo S.E., Borghi A., Piervittori R. - 2012 - Licheni e patine biologiche sui materiali lapidei della città di Torino: il caso dello gneiss di Villar Focchiardo. - Not. Soc. Lich. Ital., 25:41. Adamo P. - 1997 - Bioalterazione di rocce di natura vulcanica, dolomitica e mafica indotta da licheni. - Not. Soc. Lich. Ital., 10: 63-64. Adamo P., Marchetiello A., Violante P. - 1993 - The weathering of mafic rocks by lichens . - Lichenologist, 25, 3: 285- 297. Adamo P., Vingiani S., Violante P. - 2000 - I licheni Stereocaulon vesuvianum Pers. e Lecidea fuscoatra (L.) Ach. ed il muschio Grimmia pulvinata agenti di bioalterazione di una tefrite fonolitica dell' Etna (Sicilia) . - Not. Soc. Lich. Ital., 13: 63-64. Adamo P., Arienzo M., Pugliese M., Roca V., Violante P. - 2003 - Accumulo di radionuclidi nel tallo di Stereocaulon vesuvianum a seguito dell'incidente alla centrale elettronucleare di Chernobyl . -
A Catalogue of Carlos Tavares Portuguese Lichen Collection Housed at the Botanical Garden of the University of Lisbon Herbarium (Lisu)
Portugaliae Acta Biol. 22: 5-144 Lisboa, 2007 A CATALOGUE OF CARLOS TAVARES PORTUGUESE LICHEN COLLECTION HOUSED AT THE BOTANICAL GARDEN OF THE UNIVERSITY OF LISBON HERBARIUM (LISU) Palmira Carvalho1, Rui Figueira1,2, Ana Martins1 & João Calaim1 1Universidade de Lisboa, Museu Nacional de História Natural, Jardim Botânico, Rua da Escola Politécnica, 58, 1250-102 Lisboa, email: [email protected] 2CERENA, Instituto Superior Técnico, Av. Rovisco Pais, 1049-001 Lisboa Carvalho, P., Figueira, R., Martins, A. & Calaim, J. (2007). A catalogue of Carlos Tavares Portuguese lichen collection housed at the Botanical Garden of the University of Lisbon Herbarium (LISU). Portugaliae Acta Biol. 22: 5-144. Carlos das Neves Tavares (1914-1972) was an illustrious botanist that held the position of professor of the College of Sciences of the University of Lisbon and was director of the Museum, Laboratory and Botanical Garden of the University of Lisbon. Internationally, he is considered to be one of the best lichenologists of its time. With an extensive scientific curriculum, covering several areas, it was in the field of lichenology that he distinguished himself and for that he is still remembered and acknowledged. He wrote more than one hundred papers in this field and organized a valuable herbarium during his life. In this work we intend to emphasize the herbarium that he left as a legacy, in particular the 7506 specimens collected in Mainland Portugal, with special reference to type material. Key words: Lichens, Portugal, Tavares, LISU, herbarium. Carvalho, P., Figueira, R., Martins, A. & Calaim, J. (2007). Catálogo da colecção de líquenes portugueses de Carlos Tavares do Herbário do Jardim Botânico da Universidade de Lisboa (LISU). -
Piedmont Lichen Inventory
PIEDMONT LICHEN INVENTORY: BUILDING A LICHEN BIODIVERSITY BASELINE FOR THE PIEDMONT ECOREGION OF NORTH CAROLINA, USA By Gary B. Perlmutter B.S. Zoology, Humboldt State University, Arcata, CA 1991 A Thesis Submitted to the Staff of The North Carolina Botanical Garden University of North Carolina at Chapel Hill Advisor: Dr. Johnny Randall As Partial Fulfilment of the Requirements For the Certificate in Native Plant Studies 15 May 2009 Perlmutter – Piedmont Lichen Inventory Page 2 This Final Project, whose results are reported herein with sections also published in the scientific literature, is dedicated to Daniel G. Perlmutter, who urged that I return to academia. And to Theresa, Nichole and Dakota, for putting up with my passion in lichenology, which brought them from southern California to the Traingle of North Carolina. TABLE OF CONTENTS Introduction……………………………………………………………………………………….4 Chapter I: The North Carolina Lichen Checklist…………………………………………………7 Chapter II: Herbarium Surveys and Initiation of a New Lichen Collection in the University of North Carolina Herbarium (NCU)………………………………………………………..9 Chapter III: Preparatory Field Surveys I: Battle Park and Rock Cliff Farm……………………13 Chapter IV: Preparatory Field Surveys II: State Park Forays…………………………………..17 Chapter V: Lichen Biota of Mason Farm Biological Reserve………………………………….19 Chapter VI: Additional Piedmont Lichen Surveys: Uwharrie Mountains…………………...…22 Chapter VII: A Revised Lichen Inventory of North Carolina Piedmont …..…………………...23 Acknowledgements……………………………………………………………………………..72 Appendices………………………………………………………………………………….…..73 Perlmutter – Piedmont Lichen Inventory Page 4 INTRODUCTION Lichens are composite organisms, consisting of a fungus (the mycobiont) and a photosynthesising alga and/or cyanobacterium (the photobiont), which together make a life form that is distinct from either partner in isolation (Brodo et al. -
Australas. Lichenol. 46
Australasian Lichenology Number 46, January 2000 Australasian Lichenology Menegazzia dielsii (Hillmann) R. Sant. Number 46, January 2000 =w= -= -.- Menegazzia.. pertransita. (Stirton) R. Sant. Smm (hydrated) 5 mm ANNOUNCEMENTS AND NEWS 14th meeting of Australasian lichenologists, Melbourne, 2000 ......................... 2 5th International Flora Malesiana Symposiwn, Sydney, 2001 ......................... 2 Australian lichen checklist now on the Web ....................................................... 2 New book-Australian rainforest lichens ................................ .. ......................... 3 New calendar-Australasian cryptogams ........................................................... 3 RECENT LITERATURE ON AUSTRALASIAN LICHENS .................................. 4 ARTICLES Archer, AW-Platygrapha albovestita C. Knight, an additional synonym for Cyclographina platyleuca (Nyl.) D.D. Awasthi & M. Joshi ............................. 6 Galloway, DJ-Contributions to a history of New Zealand lichenology 3. The French ...................................... .......................................................................... 7 Elix, JA- A new species of Karoowia from Australia ...................................... 18 McCarthy, PM-Porina austropaci/ica (Trichotheliaceae), a new species from Norfolk Island .................................................................................................. 21 Elix, JA; Griffin, FK; Louwhoff, SHJJ-Norbaeomycesic acid, a new depside from the lichen Hypotrachyna oriental is .......................................................