Guiding Species Recovery through Assessment of Spatial and Temporal Population Genetic Structure of Two Critically Endangered Freshwater Mussel Species (Bivalvia: Unionidae) Jess Walter Jones (
[email protected] ) United States Fish and Wildlife Service Timothy W. Lane Virginia Department of Game and Inland Fisheries N J Eric M. Hallerman Virginia Tech: Virginia Polytechnic Institute and State University Research Article Keywords: Freshwater mussels, Epioblasma brevidens, E. capsaeformis, endangered species, spatial and temporal genetic variation, effective population size, species recovery planning, conservation genetics Posted Date: March 16th, 2021 DOI: https://doi.org/10.21203/rs.3.rs-282423/v1 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License Page 1/28 Abstract The Cumberlandian Combshell (Epioblasma brevidens) and Oyster Mussel (E. capsaeformis) are critically endangered freshwater mussel species native to the Tennessee and Cumberland River drainages, major tributaries of the Ohio River in the eastern United States. The Clinch River in northeastern Tennessee (TN) and southwestern Virginia (VA) harbors the only remaining stronghold population for either species, containing tens of thousands of individuals per species; however, a few smaller populations are still extant in other rivers. We collected and analyzed genetic data to assist with population restoration and recovery planning for both species. We used an 888 base-pair sequence of the mitochondrial NADH dehydrogenase 1 (ND1) gene and ten nuclear DNA microsatellite loci to assess patterns of genetic differentiation and diversity in populations at small and large spatial scales, and at a 9-year (2004 to 2013) temporal scale, which showed how quickly these populations can diverge from each other in a short time period.