Carlos E. Cintra Buenrostro, Ph. D. Resume / Research Experience - August 2020
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Diversity and Life-Cycle Analysis of Pacific Ocean Zooplankton by Video Microscopy and DNA Barcoding: Crustacea
Journal of Aquaculture & Marine Biology Research Article Open Access Diversity and life-cycle analysis of Pacific Ocean zooplankton by video microscopy and DNA barcoding: Crustacea Abstract Volume 10 Issue 3 - 2021 Determining the DNA sequencing of a small element in the mitochondrial DNA (DNA Peter Bryant,1 Timothy Arehart2 barcoding) makes it possible to easily identify individuals of different larval stages of 1Department of Developmental and Cell Biology, University of marine crustaceans without the need for laboratory rearing. It can also be used to construct California, USA taxonomic trees, although it is not yet clear to what extent this barcode-based taxonomy 2Crystal Cove Conservancy, Newport Coast, CA, USA reflects more traditional morphological or molecular taxonomy. Collections of zooplankton were made using conventional plankton nets in Newport Bay and the Pacific Ocean near Correspondence: Peter Bryant, Department of Newport Beach, California (Lat. 33.628342, Long. -117.927933) between May 2013 and Developmental and Cell Biology, University of California, USA, January 2020, and individual crustacean specimens were documented by video microscopy. Email Adult crustaceans were collected from solid substrates in the same areas. Specimens were preserved in ethanol and sent to the Canadian Centre for DNA Barcoding at the Received: June 03, 2021 | Published: July 26, 2021 University of Guelph, Ontario, Canada for sequencing of the COI DNA barcode. From 1042 specimens, 544 COI sequences were obtained falling into 199 Barcode Identification Numbers (BINs), of which 76 correspond to recognized species. For 15 species of decapods (Loxorhynchus grandis, Pelia tumida, Pugettia dalli, Metacarcinus anthonyi, Metacarcinus gracilis, Pachygrapsus crassipes, Pleuroncodes planipes, Lophopanopeus sp., Pinnixa franciscana, Pinnixa tubicola, Pagurus longicarpus, Petrolisthes cabrilloi, Portunus xantusii, Hemigrapsus oregonensis, Heptacarpus brevirostris), DNA barcoding allowed the matching of different life-cycle stages (zoea, megalops, adult). -
Biodiversity of Jamaican Mangrove Areas
BIODIVERSITY OF JAMAICAN MANGROVE AREAS Volume 7 Mangrove Biotypes VI: Common Fauna BY MONA WEBBER (PH.D) PROJECT FUNDED BY: 2 MANGROVE BIOTYPE VI: COMMON FAUNA CNIDARIA, ANNELIDA, CRUSTACEANS, MOLLUSCS & ECHINODERMS CONTENTS Page Introduction…………………………………………………………………… 4 List of fauna by habitat……………………………………………………….. 4 Cnidaria Aiptasia tagetes………………………………………………………… 6 Cassiopeia xamachana………………………………………………… 8 Annelida Sabellastarte magnifica………………………………………………… 10 Sabella sp………………………………………………………………. 11 Crustacea Calinectes exasperatus…………………………………………………. 12 Calinectes sapidus……………………………………………………… 13 Portunis sp……………………………………………………………… 13 Lupella forcepes………………………………………………………… 14 Persephone sp. …………………………………………………………. 15 Uca spp………………………………………………………………..... 16 Aratus pisoni……………………………………………………………. 17 Penaeus duorarum……………………………………………………… 18 Panulirus argus………………………………………………………… 19 Alphaeus sp…………………………………………………………….. 20 Mantis shrimp………………………………………………………….. 21 Balanus eberneus………………………………………………………. 22 Balanus amphitrite…………………………………………………….. 23 Chthamalus sp………………………………………………………….. 23 Mollusca Brachidontes exustus…………………………………………………… 24 Isognomon alatus………………………………………………………. 25 Crassostrea rhizophorae……………………………………………….. 26 Pinctada radiata………………………………………………………... 26 Plicatula gibosa………………………………………………………… 27 Martesia striata…………………………………………………………. 27 Perna viridis……………………………………………………………. 28 Trachycardium muricatum……………………………………..……… 30 Anadara chemnitzi………………………………………………...……. 30 Diplodonta punctata………………………………………………..…... 32 Dosinia sp…………………………………………………………..…. -
Lake Worth Lagoon
TABLE OF CONTENTS INTRODUCTION ................................................................................ 1 PURPOSE AND SIGNIFICANCE OF THE PARK ...................................... 1 Park Significance .............................................................................. 1 PURPOSE AND SCOPE OF THE PLAN ................................................... 2 MANAGEMENT PROGRAM OVERVIEW ................................................. 7 Management Authority and Responsibility ............................................ 7 Park Management Goals .................................................................... 8 Management Coordination ................................................................. 8 Public Participation ........................................................................... 9 Other Designations ........................................................................... 9 RESOURCE MANAGEMENT COMPONENT INTRODUCTION .............................................................................. 15 RESOURCE DESCRIPTION AND ASSESSMENT ................................... 15 Natural Resources .......................................................................... 16 Topography ............................................................................... 20 Geology .................................................................................... 21 Soils ......................................................................................... 21 Minerals ................................................................................... -
Copper Tolerance of Amphibalanus Amphitrite As Observed in Central Florida
Copper Tolerance of Amphibalanus amphitrite as Observed in Central Florida by Hannah Grace Brinson Bachelor of Science Oceanography Florida Institute of Technology 2015 A thesis submitted to Department of Ocean Engineering and Sciences at Florida Institute of Technology in partial fulfillment of the requirements for the degree of: Master of Science in Biological Oceanography Melbourne, Florida December 2017 We the undersigned committee hereby approve the attached thesis, “Copper Tolerance of Amphibalanus amphitrite as observed in Central Florida,” by Hannah Grace Brinson. ________________________________ Emily Ralston, Ph.D. Research Assistant Professor of Ocean Engineering and Sciences; Department of Ocean Engineering and Sciences Major Advisor ________________________________ Geoffrey Swain, Ph.D. Professor of Oceanography and Ocean Engineering; Department of Ocean Engineering and Sciences ________________________________ Kevin B. Johnson, Ph.D. Chair of Ocean Sciences; Professor of Oceanography and Environmental Sciences; Department of Ocean Engineering and Sciences ________________________________ Richard Aronson, Ph.D. Department Head and Professor of Biological Sciences; Department of Biological Sciences ________________________________ Dr. Marco Carvalho Dean of College of Engineering and Computing Abstract Copper Tolerance of Amphibalanus amphitrite as observed in Central Florida by Hannah Grace Brinson Major Advisor: Emily Ralston, Ph.D. Copper tolerance in the invasive barnacle Amphibalanus amphitrite has been observed in Florida -
An Invitation to Monitor Georgia's Coastal Wetlands
An Invitation to Monitor Georgia’s Coastal Wetlands www.shellfish.uga.edu By Mary Sweeney-Reeves, Dr. Alan Power, & Ellie Covington First Printing 2003, Second Printing 2006, Copyright University of Georgia “This book was prepared by Mary Sweeney-Reeves, Dr. Alan Power, and Ellie Covington under an award from the Office of Ocean and Coastal Resource Management, National Oceanic and Atmospheric Administration. The statements, findings, conclusions, and recommendations are those of the authors and do not necessarily reflect the views of OCRM and NOAA.” 2 Acknowledgements Funding for the development of the Coastal Georgia Adopt-A-Wetland Program was provided by a NOAA Coastal Incentive Grant, awarded under the Georgia Department of Natural Resources Coastal Zone Management Program (UGA Grant # 27 31 RE 337130). The Coastal Georgia Adopt-A-Wetland Program owes much of its success to the support, experience, and contributions of the following individuals: Dr. Randal Walker, Marie Scoggins, Dodie Thompson, Edith Schmidt, John Crawford, Dr. Mare Timmons, Marcy Mitchell, Pete Schlein, Sue Finkle, Jenny Makosky, Natasha Wampler, Molly Russell, Rebecca Green, and Jeanette Henderson (University of Georgia Marine Extension Service); Courtney Power (Chatham County Savannah Metropolitan Planning Commission); Dr. Joe Richardson (Savannah State University); Dr. Chandra Franklin (Savannah State University); Dr. Dionne Hoskins (NOAA); Dr. Charles Belin (Armstrong Atlantic University); Dr. Merryl Alber (University of Georgia); (Dr. Mac Rawson (Georgia Sea Grant College Program); Harold Harbert, Kim Morris-Zarneke, and Michele Droszcz (Georgia Adopt-A-Stream); Dorset Hurley and Aimee Gaddis (Sapelo Island National Estuarine Research Reserve); Dr. Charra Sweeney-Reeves (All About Pets); Captain Judy Helmey (Miss Judy Charters); Jan Mackinnon and Jill Huntington (Georgia Department of Natural Resources). -
The Principal Fouling Organisms
CHAPTER 9 The Principal Fouling Organisms The purpose of this chapter is to present an ele- an introduction to the scientific literature wil find mentary account of the principal organisms found references at the end of the chapter. When identi- in fouling communities in order that those un- fication to the scientific name is essential, speci- trained in zoology may observe fouling with mens should be sent to the United States National greater understanding. It contains an account of Museum, Washington, D. C., or to a museum of the appearance, habits, mode of dispersal, and natural history where they can be classified by ex- relative importance of these forms. perts. The descriptions are intended only to enable practical workers to recognize the commoner or- MICROSCOPIC FOULING ORGANISMS ganisms by the name of the group to which they The microscopic fouling organisms include bac- A B FIGURE 1. Photomicrographs of slime Elm organisms. A. A type of bacteria from a bacterial slime film. From Dobson (5). B. A diatom slime film. belong. In the case of the barnacles, the more com- tcria, diatoms, protozoa, and rotifers. The bacteria mon North American species are described in suf- aLd diatoms produce slime films which form ficient detail to indicate how species may be iden- promptly on submerged surfaces. The protozoa are tified, but the descriptions are inadequate to per- commonly associated with these films though they mit the inexperienced worker to classify barnacles take no part in their production. The successive to the species with certainty. The identification changes in these populations on a submerged sur- and naming of the species of all fouling organisms face are shown in Figure 1, Chapter 4. -
THE FESTIVUS ISSN: 0738-9388 a Publication of the San Diego Shell Club
(?mo< . fn>% Vo I. 12 ' 2 ? ''f/ . ) QUfrl THE FESTIVUS ISSN: 0738-9388 A publication of the San Diego Shell Club Volume: XXII January 11, 1990 Number: 1 CLUB OFFICERS SCIENTIFIC REVIEW BOARD President Kim Hutsell R. Tucker Abbott Vice President David K. Mulliner American Malacologists Secretary (Corres. ) Richard Negus Eugene V. Coan Secretary (Record. Wayne Reed Research Associate Treasurer Margaret Mulliner California Academy of Sciences Anthony D’Attilio FESTIVUS STAFF 2415 29th Street Editor Carole M. Hertz San Diego California 92104 Photographer David K. Mulliner } Douglas J. Eernisse MEMBERSHIP AND SUBSCRIPTION University of Michigan Annual dues are payable to San Diego William K. Emerson Shell Club. Single member: $10.00; American Museum of Natural History Family membership: $12.00; Terrence M. Gosliner Overseas (surface mail): $12.00; California Academy of Sciences Overseas (air mail): $25.00. James H. McLean Address all correspondence to the Los Angeles County Museum San Diego Shell Club, Inc., c/o 3883 of Natural History Mt. Blackburn Ave., San Diego, CA 92111 Barry Roth Research Associate Single copies of this issue: $5.00. Santa Barbara Museum of Natural History Postage is additional. Emily H. Vokes Tulane University The Festivus is published monthly except December. The publication Meeting date: third Thursday, 7:30 PM, date appears on the masthead above. Room 104, Casa Del Prado, Balboa Park. PROGRAM TRAVELING THE EAST COAST OF AUSTRALIA Jules and Carole Hertz will present a slide program on their recent three week trip to Queensland and Sydney. They will also bring a display of shells they collected Slides of the Club Christmas party will also be shown. -
List of All Nominal Recent Species Belonging to the Superfamily Mactroidea Distributed in American Waters
Appendix A: List of All Nominal Recent Species Belonging to the Superfamily Mactroidea Distributed in American Waters Valid species (in the current combination) Synonym Examined type material Harvella elegans NHMUK 20190673, two syntypes (G.B. Sowerby I, 1825) Harvella pacifica ANSP 51308, syntype Conrad, 1867 Mactra estrellana PRI 21265, holotype Olsson, 1922 M. (Harvella) PRI 2354, holotype sanctiblasii Maury, 1925 Raeta maxima Li, AMNH 268093, lectotype; AMNH 268093a, 1930 paralectotype Harvella elegans PRI 2252, holotype tucilla Olsson, 1932 Mactrellona alata ZMUC-BIV, holotype, articulated specimen; (Spengler, 1802) ZMUC-BIV, paratype, one complete specimen Mactra laevigata ZMUC-BIV 1036, holotype Schumacher, 1817 Mactra carinata MNHN-IM-2000-7038, syntypes Lamarck, 1818 Mactrellona Types not found, based on the figure of the concentrica (Bory de “Tableau of Encyclopedique Methodique…” Saint Vincent, (pl. 251, Fig. 2a, b, pl. 252, Fig. 2c) published in 1827, in Bruguière 1797 without a nomenclatorial act et al. 1791–1827) Mactrellona clisia USNM 271481, holotype (Dall, 1915) Mactrellona exoleta NHMUK 196327, syntype, one complete (Gray, 1837) specimen © Springer Nature Switzerland AG 2019 103 J. H. Signorelli, The Superfamily Mactroidea (Mollusca:Bivalvia) in American Waters, https://doi.org/10.1007/978-3-030-29097-9 104 Appendix A: List of All Nominal Recent Species Belonging to the Superfamily… Valid species (in the current combination) Synonym Examined type material Lutraria ventricosa MCZ 169451, holotype; MCZ 169452, paratype; -
Hermit Crabs - Paguridae and Diogenidae
Identification Guide to Marine Invertebrates of Texas by Brenda Bowling Texas Parks and Wildlife Department April 12, 2019 Version 4 Page 1 Marine Crabs of Texas Mole crab Yellow box crab Giant hermit Surf hermit Lepidopa benedicti Calappa sulcata Petrochirus diogenes Isocheles wurdemanni Family Albuneidae Family Calappidae Family Diogenidae Family Diogenidae Blue-spot hermit Thinstripe hermit Blue land crab Flecked box crab Paguristes hummi Clibanarius vittatus Cardisoma guanhumi Hepatus pudibundus Family Diogenidae Family Diogenidae Family Gecarcinidae Family Hepatidae Calico box crab Puerto Rican sand crab False arrow crab Pink purse crab Hepatus epheliticus Emerita portoricensis Metoporhaphis calcarata Persephona crinita Family Hepatidae Family Hippidae Family Inachidae Family Leucosiidae Mottled purse crab Stone crab Red-jointed fiddler crab Atlantic ghost crab Persephona mediterranea Menippe adina Uca minax Ocypode quadrata Family Leucosiidae Family Menippidae Family Ocypodidae Family Ocypodidae Mudflat fiddler crab Spined fiddler crab Longwrist hermit Flatclaw hermit Uca rapax Uca spinicarpa Pagurus longicarpus Pagurus pollicaris Family Ocypodidae Family Ocypodidae Family Paguridae Family Paguridae Dimpled hermit Brown banded hermit Flatback mud crab Estuarine mud crab Pagurus impressus Pagurus annulipes Eurypanopeus depressus Rithropanopeus harrisii Family Paguridae Family Paguridae Family Panopeidae Family Panopeidae Page 2 Smooth mud crab Gulf grassflat crab Oystershell mud crab Saltmarsh mud crab Hexapanopeus angustifrons Dyspanopeus -
Placencia Lagoon Rapid Environmental Assessment - Draft Placencia Lagoon
Placencia Lagoon Rapid Environmental Assessment - Draft Placencia Lagoon Rapid Environmental Assessment Working Draft Wildtracks, 2014… 1 Placencia Lagoon Rapid Environmental Assessment - Draft An Introduction to the Placencia Lagoon Area ii Executive Summary 4 1.0 Background 7 1.1 Location and Site Description 7 2.0 Social Context and Community Perceptions 12 2.1 Key Stakeholder Communities 12 2.1.1 Placencia 13 2.1.2 Seine Bight 14 2.1.3 Maya Beach 15 2.1.4 Independence 15 2.2 Socio-Economic Context 16 3.0 Conservation Importance of the Placencia Lagoon Area 18 3.1 Role within the National Protected Areas System 18 3.2 Ecosystem Services 19 4.0 Physical Characteristics 21 4.1 Climate 21 4.2 Hydrology 25 4.3 Geology, Soils and Land Use 32 5.0 Biodiversity Assessment 35 5.1. Ecosystems of the Placencia Lagoon Area 36 5.2 Fauna 51 5.2.1 Mammals 51 5.2.2 Birds 58 5.2.3 Reptiles and Amphibians 60 5.2.4 Fish of Placencia Lagoon 62 Wildtracks, 2014… 2 Placencia Lagoon Rapid Environmental Assessment - Draft 6.0 Anthropogenic Impacts that have shaped the Placencia Lagoon Area 65 6.1 Ancient History 68 6.2 Recent History 70 6.2.1 Tourism and Residential Development 74 6.2.2 Aquaculture 78 6.2.4 Fishing 80 6.2.5 Climate Change 82 7.0 Planning for the Peninsula 84 7.1 Peninsula 2020 Initiative. 84 7.2 Sustainable Tourism Master Plan. 85 7.3 South-Central region Coastal Zone Management Guidelines (CZMAI, 2013). -
Distribution and Status of the Introduced Red-Eared Slider (Trachemys Scripta Elegans) in Taiwan 187 T.-H
Assessment and Control of Biological Invasion Risks Compiled and Edited by Fumito Koike, Mick N. Clout, Mieko Kawamichi, Maj De Poorter and Kunio Iwatsuki With the assistance of Keiji Iwasaki, Nobuo Ishii, Nobuo Morimoto, Koichi Goka, Mitsuhiko Takahashi as reviewing committee, and Takeo Kawamichi and Carola Warner in editorial works. The papers published in this book are the outcome of the International Conference on Assessment and Control of Biological Invasion Risks held at the Yokohama National University, 26 to 29 August 2004. The designation of geographical entities in this book, and the presentation of the material, do not imply the expression of any opinion whatsoever on the part of IUCN concerning the legal status of any country, territory, or area, or of its authorities, or concerning the delimitation of its frontiers or boundaries. The views expressed in this publication do not necessarily reflect those of IUCN. Publication of this book was aided by grants from the 21st century COE program of Japan Society for Promotion of Science, Keidanren Nature Conservation Fund, the Japan Fund for Global Environment of the Environmental Restoration and Conservation Agency, Expo’90 Foundation and the Fund in the Memory of Mr. Tomoyuki Kouhara. Published by: SHOUKADOH Book Sellers, Japan and the World Conservation Union (IUCN), Switzerland Copyright: ©2006 Biodiversity Network Japan Reproduction of this publication for educational or other non-commercial purposes is authorised without prior written permission from the copyright holder provided the source is fully acknowledged and the copyright holder receives a copy of the reproduced material. Reproduction of this publication for resale or other commercial purposes is prohibited without prior written permission of the copyright holder. -
Rapid Assessment Survey of Marine Species at New England Bays and Harbors
Report on the 2013 Rapid Assessment Survey of Marine Species at New England Bays and Harbors June 2014 CREDITS AUTHORED BY: Christopher D. Wells, Adrienne L. Pappal, Yuangyu Cao, James T. Carlton, Zara Currimjee, Jennifer A. Dijkstra, Sara K. Edquist, Adriaan Gittenberger, Seth Goodnight, Sara P. Grady, Lindsay A. Green, Larry G. Harris, Leslie H. Harris, Niels-Viggo Hobbs, Gretchen Lambert, Antonio Marques, Arthur C. Mathieson, Megan I. McCuller, Kristin Osborne, Judith A. Pederson, Macarena Ros, Jan P. Smith, Lauren M. Stefaniak, and Alexandra Stevens This report is a publication of the Massachusetts Office of Coastal Management (CZM) pursuant to the National Oceanic and Atmospheric Administration (NOAA). This publication is funded (in part) by a grant/cooperative agreement to CZM through NOAA NA13NOS4190040 and a grant to MIT Sea Grant through NOAA NA10OAR4170086. The views expressed herein are those of the author(s) and do not necessarily reflect the views of NOAA or any of its sub-agencies. This project has been financed, in part, by CZM; Massachusetts Bays Program; Casco Bay Estuary Partnership; Piscataqua Region Estuaries Partnership; the Rhode Island Bays, Rivers, and Watersheds Coordination Team; and the Massachusetts Institute of Technology Sea Grant College Program. Commonwealth of Massachusetts Deval L. Patrick, Governor Executive Office of Energy and Environmental Affairs Maeve Vallely Bartlett, Secretary Massachusetts Office of Coastal Zone Management Bruce K. Carlisle, Director Massachusetts Office of Coastal Zone Management 251 Causeway Street, Suite 800 Boston, MA 02114-2136 (617) 626-1200 CZM Information Line: (617) 626-1212 CZM Website: www.mass.gov/czm PHOTOS: Adriaan Gittenberger, Gretchen Lambert, Linsey Haram, and Hans Hillewaert ACKNOWLEDGMENTS The New England Rapid Assessment Survey was a collaborative effort of many individuals.