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Identifying Heterogeneity in Rates of Morphological Evolution: Discrete Character Change in the Evolution of Lungfish (Sarcopterygii; Dipnoi)
ORIGINAL ARTICLE doi:10.1111/j.1558-5646.2011.01460.x IDENTIFYING HETEROGENEITY IN RATES OF MORPHOLOGICAL EVOLUTION: DISCRETE CHARACTER CHANGE IN THE EVOLUTION OF LUNGFISH (SARCOPTERYGII; DIPNOI) Graeme T. Lloyd,1,2 Steve C. Wang,3 and Stephen L. Brusatte4,5 1Department of Palaeontology, Natural History Museum, Cromwell Road, London SW7 5BD, United Kingdom 2E-mail: [email protected] 3Department of Mathematics and Statistics, Swarthmore College, Swarthmore, Pennsylvania 19081 4Division of Paleontology, American Museum of Natural History, Central Park West at 79th Street, New York, New York 10024 5Department of Earth and Environmental Sciences, Columbia University, New York, New York 10025 Received February 9, 2010 Accepted August 15, 2011 Data Archived: Dryad: doi:10.5061/dryad.pg46f Quantifying rates of morphological evolution is important in many macroevolutionary studies, and critical when assessing possible adaptive radiations and episodes of punctuated equilibrium in the fossil record. However, studies of morphological rates of change have lagged behind those on taxonomic diversification, and most authors have focused on continuous characters and quantifying patterns of morphological rates over time. Here, we provide a phylogenetic approach, using discrete characters and three statistical tests to determine points on a cladogram (branches or entire clades) that are characterized by significantly high or low rates of change. These methods include a randomization approach that identifies branches with significantly high rates and likelihood ratio tests that pinpoint either branches or clades that have significantly higher or lower rates than the pooled rate of the remainder of the tree. As a test case for these methods, we analyze a discrete character dataset of lungfish, which have long been regarded as “living fossils” due to an apparent slowdown in rates since the Devonian. -
The Carboniferous Evolution of Nova Scotia
Downloaded from http://sp.lyellcollection.org/ by guest on September 27, 2021 The Carboniferous evolution of Nova Scotia J. H. CALDER Nova Scotia Department of Natural Resources, PO Box 698, Halifax, Nova Scotia, Canada B3J 2T9 Abstract: Nova Scotia during the Carboniferous lay at the heart of palaeoequatorial Euramerica in a broadly intermontane palaeoequatorial setting, the Maritimes-West-European province; to the west rose the orographic barrier imposed by the Appalachian Mountains, and to the south and east the Mauritanide-Hercynide belt. The geological affinity of Nova Scotia to Europe, reflected in elements of the Carboniferous flora and fauna, was mirrored in the evolution of geological thought even before the epochal visits of Sir Charles Lyell. The Maritimes Basin of eastern Canada, born of the Acadian-Caledonian orogeny that witnessed the suture of Iapetus in the Devonian, and shaped thereafter by the inexorable closing of Gondwana and Laurasia, comprises a near complete stratal sequence as great as 12 km thick which spans the Middle Devonian to the Lower Permian. Across the southern Maritimes Basin, in northern Nova Scotia, deep depocentres developed en echelon adjacent to a transform platelet boundary between terranes of Avalon and Gondwanan affinity. The subsequent history of the basins can be summarized as distension and rifting attended by bimodal volcanism waning through the Dinantian, with marked transpression in the Namurian and subsequent persistence of transcurrent movement linking Variscan deformation with Mauritainide-Appalachian convergence and Alleghenian thrusting. This Mid- Carboniferous event is pivotal in the Carboniferous evolution of Nova Scotia. Rapid subsidence adjacent to transcurrent faults in the early Westphalian was succeeded by thermal sag in the later Westphalian and ultimately by basin inversion and unroofing after the early Permian as equatorial Pangaea finally assembled and subsequently rifted again in the Triassic. -
A Redescription of the Lungfish Eoctenodus Hills 1929, with Reassessment of Other Australian Records of the Genus Dipterns Sedgwick & Murchison 1828
Ree. West. Aust. Mus. 1987, 13 (2): 297-314 A redescription of the lungfish Eoctenodus Hills 1929, with reassessment of other Australian records of the genus Dipterns Sedgwick & Murchison 1828. J.A. Long* Abstract Eoctenodus microsoma Hills 1929 (= Dipterus microsoma Hills, 1931) from the Frasnian Blue Range Formation, near Taggerty, Victoria, is found to be a valid genus, differing from Dipterus, and other dipnoans, by the shape of the parasphenoid and toothplates. The upper jaw toothp1ates and entopterygoids, parasphenoid, c1eithrum, anoc1eithrum and scales of Eoctenodus are described. Eoctenodus may represent the earliest member of the Ctenodontidae. Dipterus cf. D. digitatus. from the Late Devonian Gneudna Formation, Western Australia (Seddon, 1969), is assigned to Chirodipterus australis Miles 1977; and Dipterus sp. from the Late Devonian of Gingham Gap, New South Wales (Hills, 1936) is thought to be con generic with a dipnoan of similar age from the Hunter Siltstone, New South Wales. This form differs from Dipterus in the shape of the parasphenoid. The genus Dipterus appears to be restricted to the Middle-Upper Devonian of Europe, North America and the USSR (Laurasia). Introduction Although Hills (1929) recognised a new dipnoan, Eoctenodus microsoma, in the Late Devonian fish remains from the Blue Range Formation, near Taggerty, he later (Hills 1931) altered the generic status of this species after a study trip to Britain in which D,M.S. Watson pointed out similarities between the Australian form and the British genus Dipterus Sedgwick and Murchison 1828. Studies of the head of Dipterus by Westoll (1949) and White (1965) showed the structure of the palate and, in particular, the shape of the parasphenoid which differs from that in the Taggerty dipnoan. -
A Lungfish Survivor of the End-Devonian Extinction and an Early Carboniferous Dipnoan
1 A Lungfish survivor of the end-Devonian extinction and an Early Carboniferous dipnoan 2 radiation. 3 4 Tom J. Challands1*, Timothy R. Smithson,2 Jennifer A. Clack2, Carys E. Bennett3, John E. A. 5 Marshall4, Sarah M. Wallace-Johnson5, Henrietta Hill2 6 7 1School of Geosciences, University of Edinburgh, Grant Institute, James Hutton Road, Edinburgh, 8 EH9 3FE, UK. email: [email protected]; tel: +44 (0) 131 650 4849 9 10 2University Museum of Zoology Cambridge, Downing Street, Cambridge CB2 3EJ, UK. 11 12 3Department of Geology, University of Leicester, Leicester LE1 7RH, UK. 13 14 4School of Ocean & Earth Science, University of Southampton, National Oceanography Centre, 15 European Way, University Road, Southampton, SO14 3ZH , UK. 16 17 5Sedgwick Museum, Department of Earth Sciences, University of Cambridge, Downing St., 18 Cambridge CB2 3EQ, UK 1 19 Abstract 20 21 Until recently the immediate aftermath of the Hangenberg event of the Famennian Stage (Upper 22 Devonian) was considered to have decimated sarcopterygian groups, including lungfish, with only 23 two taxa, Occludus romeri and Sagenodus spp., being unequivocally recorded from rocks of 24 Tournaisian age (Mississippian, Early Carboniferous). Recent discoveries of numerous 25 morphologically diverse lungfish tooth plates from southern Scotland and northern England indicate 26 that at least ten dipnoan taxa existed during the earliest Carboniferous. Of these taxa, only two, 27 Xylognathus and Ballgadus, preserve cranial and post-cranial skeletal elements that are yet to be 28 described. Here we present a description of the skull of a new genus and species of lungfish, 29 Limanichthys fraseri gen. -
I Ecomorphological Change in Lobe-Finned Fishes (Sarcopterygii
Ecomorphological change in lobe-finned fishes (Sarcopterygii): disparity and rates by Bryan H. Juarez A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science (Ecology and Evolutionary Biology) in the University of Michigan 2015 Master’s Thesis Committee: Assistant Professor Lauren C. Sallan, University of Pennsylvania, Co-Chair Assistant Professor Daniel L. Rabosky, Co-Chair Associate Research Scientist Miriam L. Zelditch i © Bryan H. Juarez 2015 ii ACKNOWLEDGEMENTS I would like to thank the Rabosky Lab, David W. Bapst, Graeme T. Lloyd and Zerina Johanson for helpful discussions on methodology, Lauren C. Sallan, Miriam L. Zelditch and Daniel L. Rabosky for their dedicated guidance on this study and the London Natural History Museum for courteously providing me with access to specimens. iii TABLE OF CONTENTS ACKNOWLEDGEMENTS ii LIST OF FIGURES iv LIST OF APPENDICES v ABSTRACT vi SECTION I. Introduction 1 II. Methods 4 III. Results 9 IV. Discussion 16 V. Conclusion 20 VI. Future Directions 21 APPENDICES 23 REFERENCES 62 iv LIST OF TABLES AND FIGURES TABLE/FIGURE II. Cranial PC-reduced data 6 II. Post-cranial PC-reduced data 6 III. PC1 and PC2 Cranial and Post-cranial Morphospaces 11-12 III. Cranial Disparity Through Time 13 III. Post-cranial Disparity Through Time 14 III. Cranial/Post-cranial Disparity Through Time 15 v LIST OF APPENDICES APPENDIX A. Aquatic and Semi-aquatic Lobe-fins 24 B. Species Used In Analysis 34 C. Cranial and Post-Cranial Landmarks 37 D. PC3 and PC4 Cranial and Post-cranial Morphospaces 38 E. PC1 PC2 Cranial Morphospaces 39 1-2. -
A New Species of the Genus Atlantoceratodus
Brazilian Geographical Journal: Geosciences and Humanities research medium, Uberlândia, v. 1, n. 2, p. 162-210, jul./dec. 2010 Brazilian Geographical Journal: Geosciences and Humanities research medium UFU ARTICLES /A RTIGOS /A RTÍCULOS /A RTICLES A new species of the genus Atlantoceratodus (Dipnoiformes: Ceratodontoidei) from the Uppermost Cretaceous of Patagonia and a brief overview of fossil dipnoans from the Cretaceous and Paleogene of South America Federico Agnolin Laboratorio de Anatomía Comparada y Evolución de los Vertebrados, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”; Fundación de Historia Natural “Félix de Azara”. Departamento de Ciencias Naturales y Antropología, Buenos Aires, Argentina E-mail: [email protected] BSTRACT ARTICLE HISTORY A A new species of the genus Atlantoceratodus is Received: 30 August 2010 diagnosed and described on the basis of isolated tooth Accepeted: 16 December 2010 plates from several localities of the Allen Formation (Campanian-Maastrichtian), Río Negro province, northern Patagonia, Argentina. The new species belongs to the genus Atlantoceratodus Cione et al., KEY WORDS : 2007 (senior synonym of Ameghinoceratodus South America Apesteguía; Agnolin; Claeson, 2007) together with A. Cretaceous iheringi and A. elliotti nov. comb. A new phylogenetic Paleogene analysis including tooth plates and calvarian Dipnoi morphology has been conducted in order to evaluate Atlantoceratodus . the relationships among post-Paleozoic dipnoans of the clade Ceratodontoidei. The first ceratodontoid dichotomy includes, on one hand the Neodipnoi nov. (Lepidosirenidae + Neoceratodontidae) and on the other side the “High Crowned Dipnoans” clade (Ceratodontidae + (Asiatoceratodontidae + Ptychoceratodontidae)). Based on this analysis, all South American ptychoceratodontid remains are included within the genus Ferganoceratodus. The ceratodontid genus Metaceratodus is restricted to include the single species M. -
The Westernmost Occurrence of Gnathorhiza in the Triassic, with a Discussion of the Stratigraphic and Palaeogeographic Distribution of the Genus
Foss. Rec., 19, 17–29, 2016 www.foss-rec.net/19/17/2016/ doi:10.5194/fr-19-17-2016 © Author(s) 2016. CC Attribution 3.0 License. The westernmost occurrence of Gnathorhiza in the Triassic, with a discussion of the stratigraphic and palaeogeographic distribution of the genus P. Skrzycki Institute of Paleobiology, Polish Academy of Sciences, Warsaw, Poland Correspondence to: P. Skrzycki ([email protected]) Received: 18 August 2015 – Revised: 4 December 2015 – Accepted: 9 December 2015 – Published: 15 January 2016 Abstract. The paper refines the taxonomic assignment of USA (Dalquest et al., 1989), Germany (Boy and Schindler, the only representative of the dipnoan genus Gnathorhiza 2000) and Oman (Schultze et al., 2008). In the Late Permian, from the Lower Triassic of Poland. It is assigned here to Gnathorhiza occurred in Russia (Minikh, 1989; Minikh and Gnathorhiza otschevi on the basis of morphological and bio- Minikh, 2006) and Brazil (Toledo and Bertini, 2005). The metrical similarity with the tooth plates from coeval strata of youngest fossils of Gnathorhiza are known from the Lower the European part of Russia. The material is comprised solely Triassic freshwater sediments of Russia (Minikh, 1977, of tooth plates, both the upper and the lower ones. It comes 2000; Minikh and Minikh, 2006; Newell et al., 2010) and from karst deposits of the Czatkowice 1 locality (southern Poland (Borsuk-Białynicka et al., 2003). Poland) dated to late Olenekian, Lower Triassic. The pres- The Polish findings of Gnathorhiza come from karst de- ence of G. otschevi in southern Poland widens its palaeo- posits of the Czatkowice 1 locality situated near Cracow, biogeographic Triassic record by more than 2000 km to the southern Poland. -
A High Latitude Devonian Lungfish, from the Famennian of South Africa
A high latitude Devonian lungfish, from the Famennian of South Africa Robert W. Gess1,2,3,* and Alice M. Clement4,* 1 Geology Department, Rhodes University, Makhanda/Grahamstown, South Africa 2 Albany Museum, Makhanda/Grahamstown, South Africa 3 Wits University, DST-NRF Centre of Excellence in Palaeosciences (CoE-Pal), Johannesburg, South Africa 4 College of Science and Engineering, Flinders University, Adelaide, SA, Australia * These authors contributed equally to this work. ABSTRACT New fossil lungfish remains comprising two parasphenoids, tooth plates and scales from the Famennian Witpoort Formation of South Africa are described. From the parasphenoid material, which bears similarity to Oervigia and Sagenodus but is nevertheless unique, a new genus, Isityumzi mlomomde gen. et sp. nov. is erected. Tooth plates and scales from the same locality may be conspecific but are not yet assigned until further material becomes available. The tooth plates closely resemble those of some taxa in the Carboniferous genus Ctenodus. The new taxon is significant as only the second Devonian lungfish described from the African continent, and for hailing from the high-latitude (polar) Waterloo Farm environment situated close to 70 south during the Famennian. Subjects Paleontology, Taxonomy Keywords Waterloo farm, Witpoort formation, Dipnoi, Famennian, South Africa, Western Gondwana, Sarcopterygii, Palaeozoic INTRODUCTION Lungfish (Dipnoi) are a clade of sarcopterygian (lobe-finned) fishes with their origins Submitted 30 July 2019 stretching back to the Early Devonian, over 410 million years ago (Campbell & Barwick, Accepted 21 October 2019 Published 4 December 2019 1983; Chang & Yu, 1984; Denison, 1968; Wang et al., 1993). They reached a peak of diversity and abundance throughout the Devonian with close to 100 species described Corresponding author Alice M. -
Fish and Tetrapod Communities Across a Marine to Brackish
Palaeontology Fish and tetrapod communities across a marine to brackish salinity gradient in the Pennsylvanian (early Moscovian) Minto Formation of New Brunswick, Canada, and their palaeoecological and palaeogeographic implications Journal: Palaeontology Manuscript ID PALA-06-16-3834-OA.R1 Manuscript Type: Original Article Date Submitted by the Author: 27-Jun-2016 Complete List of Authors: Ó Gogáin, Aodhán; Earth Sciences Falcon-Lang, Howard; Royal Holloway, University of London, Department of Earth Science Carpenter, David; University of Bristol, Earth Sciences Miller, Randall; New Brunswick Museum, Curator of Geology and Palaeontology Benton, Michael; Univeristy of Bristol, Earth Sciences Pufahl, Peir; Acadia University, Earth and Environmental Science Ruta, Marcello; University of Lincoln, Life Sciences; Davies, Thoams Hinds, Steven Stimson, Matthew Pennsylvanian, Fish communities, Salinity gradient, Euryhaline, Key words: Cosmopolitan, New Brunswick Palaeontology Page 1 of 121 Palaeontology 1 2 3 4 1 5 6 7 1 Fish and tetrapod communities across a marine to brackish salinity gradient in the 8 9 2 Pennsylvanian (early Moscovian) Minto Formation of New Brunswick, Canada, and 10 3 their palaeoecological and palaeogeographic al implications 11 12 4 13 14 5 by AODHÁN Ó GOGÁIN 1, 2 , HOWARD J. FALCON-LANG 3, DAVID K. CARPENTER 4, 15 16 6 RANDALL F. MILLER 5, MICHAEL J. BENTON 1, PEIR K. PUFAHL 6, MARCELLO 17 18 7 RUTA 7, THOMAS G. DAVIES 1, STEVEN J. HINDS 8 and MATTHEW R. STIMSON 5, 8 19 20 8 21 22 9 1 School of Earth Sciences, University -
Graeme T. Lloyd <[email protected]>
Can palaeobiogeography explain low rates of morphological evolution in ‘living fossil’ lungfish? Graeme T. Lloyd <[email protected]> n=124 Introduction Methods and Materials A B In a classic work Westoll (1949) used a character-taxon matrix to show that Aside from the inevitable addition of new taxa and refinements to the lungfish underwent rapid morphological evolution early in their history geological timescale since 1949 there are some significant flaws in No followed by an extended period of morphological stagnation (Figure 1): a Westoll’s method: 1) the ancestor is purely hypothetical, 2) a selective Change textbook example (literally) of evolution in a ‘living fossil’. Here I update suite of taxa was used, 3) error bars (missing data) constrain Contraction 45 Westoll’s method for use with cladistic datasets and place it in its correct interpretation, 4) a stratigraphically ordered ancestor-descendant 55.5 phylogenetic context. One proposed explanation for the existence of living sequence was assumed, and 5) reversal (character loss) wasn’t taken into fossils is geographic isolation in refugia, where lack of competition negates account. Although modern cladistic matrices are more inclusive and more Expansion the need for morphological change. Here this hypothesis is tested by often contain a real outgroup (answering points 1 and 2 above) missing 23.5 C comparing lungfish dispersal patterns during their rapid Devonian phase data is still a major issue. To overcome this the internal nodes (rather than with their slower post-Devonian phase of evolution. the taxa themselves) were scored as these are complete under a given phylogenetic hypothesis. -
Lungfishes, Tetrapods, Paleontology, and Plesiomorphy
LUNGFISHES, TETRAPODS, PALEONTOLOGY, AND PLESIOMORPHY DONN E. ROSEN Curator, Department of Ichthyology American Museum of Natural History Adjunct Professor, City University of New York PETER L. FOREY Principal Scientific Officer, Department of Palaeontology British Museum (Natural History) BRIAN G. GARDINER Reader in Zoology, SirJohn Atkins Laboratories Queen Elizabeth College, London COLIN PATTERSON Research Associate, Department of Ichthyology American Museum of Natural History Senior Principal Scientyifc Officer, Department of Palaeontology British Museum (Natural History) BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY VOLUME 167: ARTICLE 4 NEW YORK: 1981 BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY Volume 167, article 4, pages 159-276, figures 1-62, tables 1,2 Issued February 26, 1981 Price: $6.80 a copy ISSN 0003-0090 Copyright © American Museum of Natural History 1981 CONTENTS Abstract ........................................ 163 Introduction ...................... ........................ 163 Historical Survey ...................... ........................ 166 Choana, Nostrils, and Snout .............................................. 178 (A) Initial Comparisons and Inferences .......................................... 178 (B) Nasal Capsule ............. ................................. 182 (C) Choana and Nostril in Dipnoans ............................................ 184 (D) Choana and Nostril in Rhipidistians ........................................ 187 (E) Choana and Nostril in Tetrapods .......................................... -
Osteichthyan Feeding and Respiration
Contributions to Zoology, 72 (I) 17-37 (2003) SPB Academic Publishing bv, The Hague The clavobranchialis musculature in sarcopterygian fishes, and contribution to osteichthyan feeding and respiration Zerina Johanson Palaeontology, Australian Museum, 6 College Street, Sydney, NSW 2010, Australia, e-mail: [email protected] Keywords:: Clavobranchiales, Sarcopterygii, Actinopterygii, Chondrichthyes, coracobranchiales, Dipnoi, Neoceratodus, Strepsodus Abstract Introduction Various fossil distinct the lungfish taxa preserve depressions on Muscles originating on pectoral girdle and in- the smooth postbranchial lamina ofthe dermal pectoral girdle. serting anteriorly on the mandible and branchial These depressions are largely unknown in other sarcopterygian arches depress or lower the mandible, hyoid arch, fishes, are but present in the rhizodont sarcopterygian Strepsodus. and more posterior gill arches. Of these muscles, Comparisons extant fishes these with actinopterygian suggest much of the research into ver- depressions mark the point of origin for the clavobranchialis gnathostome (jawed and has musculature, extending anterodorsally into the gill chamber to tebrates) feeding respiration focused on the insert on the ventral surface ofthe Studios ceratobranchial(s). sternohyoideus and coracomandibularis. The sterno- examining feeding and respiratory mechanisms ofbony fishes hyoideus (= rectus cervicus) attaches to the ventral (Osteichthyes) have emphasised the role of mandibular depres- of the hyoid arch and lowers the mandible within the oral portions sion in generating negative pressures cavity to draw in via the the latter run- water/air/food via suction. However, phylogenetically mandibulohyoid ligament, basal dorsal and actinopterygians, fossil lungfish and other fossil sarcoptc- ning between the ceratohyal the rear of rygians (such as Strepsodus) lack the apomorphies that increase the mandible (Lauder, 1979, 1980, 1982, 1983a, b, suction among bony fishes.