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Amphibian Abundance and Detection Trends During a Large Flood in a Semi-Arid Floodplain Wetland
Herpetological Conservation and Biology 11:408–425. Submitted: 26 January 2016; Accepted: 2 September 2016; Published: 16 December 2016. Amphibian Abundance and Detection Trends During a Large Flood in a Semi-Arid Floodplain Wetland Joanne F. Ocock1,4, Richard T. Kingsford1, Trent D. Penman2, and Jodi J.L. Rowley1,3 1Centre for Ecosystem Science, School of Biological, Earth and Environmental Sciences, UNSW Australia, Sydney, New South Wales, 2052, Australia 2Centre for Environmental Risk Management of Bushfires, Institute of Conservation Biology and Environmental Management, University of Wollongong, Wollongong, New South Wales 2522, Australia 3Australian Museum Research Institute, Australian Museum, 6 College St, Sydney, New South Wales 2010, Australia 4Corresponding author, email: [email protected] Abstract.—Amphibian abundance and occupancy are often reduced in regulated river systems near dams, but com- paratively little is known about how they are affected on floodplain wetlands downstream or the effects of actively managed flows. We assessed frog diversity in the Macquarie Marshes, a semi-arid floodplain wetland of conserva- tion significance, identifying environmental variables that might explain abundances and detection of species. We collected relative abundance data of 15 amphibian species at 30 sites over four months, coinciding with a large natural flood. We observed an average of 39.9 ± (SE) 4.3 (range, 0-246) individuals per site survey, over 47 survey nights. Three non-burrowing, ground-dwelling species were most abundant at temporarily flooded sites with low- growing aquatic vegetation (e.g., Limnodynastes tasmaniensis, Limnodynastes fletcheri, Crinia parinsignifera). Most arboreal species (e.g., Litoria caerulea) were more abundant in wooded habitat, regardless of water permanency. -
Effects of Emerging Infectious Diseases on Amphibians: a Review of Experimental Studies
diversity Review Effects of Emerging Infectious Diseases on Amphibians: A Review of Experimental Studies Andrew R. Blaustein 1,*, Jenny Urbina 2 ID , Paul W. Snyder 1, Emily Reynolds 2 ID , Trang Dang 1 ID , Jason T. Hoverman 3 ID , Barbara Han 4 ID , Deanna H. Olson 5 ID , Catherine Searle 6 ID and Natalie M. Hambalek 1 1 Department of Integrative Biology, Oregon State University, Corvallis, OR 97331, USA; [email protected] (P.W.S.); [email protected] (T.D.); [email protected] (N.M.H.) 2 Environmental Sciences Graduate Program, Oregon State University, Corvallis, OR 97331, USA; [email protected] (J.U.); [email protected] (E.R.) 3 Department of Forestry and Natural Resources, Purdue University, West Lafayette, IN 47907, USA; [email protected] 4 Cary Institute of Ecosystem Studies, Millbrook, New York, NY 12545, USA; [email protected] 5 US Forest Service, Pacific Northwest Research Station, Corvallis, OR 97331, USA; [email protected] 6 Department of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA; [email protected] * Correspondence [email protected]; Tel.: +1-541-737-5356 Received: 25 May 2018; Accepted: 27 July 2018; Published: 4 August 2018 Abstract: Numerous factors are contributing to the loss of biodiversity. These include complex effects of multiple abiotic and biotic stressors that may drive population losses. These losses are especially illustrated by amphibians, whose populations are declining worldwide. The causes of amphibian population declines are multifaceted and context-dependent. One major factor affecting amphibian populations is emerging infectious disease. Several pathogens and their associated diseases are especially significant contributors to amphibian population declines. -
Resource Allocation to Reproduction in Animals
Biol. Rev. (2014), 89, pp. 849–859. 849 doi: 10.1111/brv.12082 Resource allocation to reproduction in animals Sebastiaan A. L. M. Kooijman1,∗ and Konstadia Lika2 1Department of Theoretical Biology, VU University Amsterdam, de Boelelaan 1087, 1081 HV Amsterdam, The Netherlands 2Department of Biology, University of Crete, Voutes University Campus, 70013 Heraklion, Crete, Greece ABSTRACT The standard Dynamic Energy Budget (DEB) model assumes that a fraction κ of mobilised reserve is allocated to somatic maintenance plus growth, while the rest is allocated to maturity maintenance plus maturation (in embryos and juveniles) or reproduction (in adults). All DEB parameters have been estimated for 276 animal species from most large phyla and all chordate classes. The goodness of fit is generally excellent. We compared the estimated values of κ with those that would maximise reproduction in fully grown adults with abundant food. Only 13% of these species show a reproduction rate close to the maximum possible (assuming that κ can be controlled), another 4% have κ lower than the optimal value, and 83% have κ higher than the optimal value. Strong empirical support hence exists for the conclusion that reproduction is generally not maximised. We also compared the parameters of the wild chicken with those of races selected for meat and egg production and found that the latter indeed maximise reproduction in terms of κ, while surface-specific assimilation was not affected by selection. We suggest that small values of κ relate to the down-regulation of maximum body size, and large values to the down-regulation of reproduction. We briefly discuss the ecological context for these findings. -
Fauna of Australia 2A
FAUNA of AUSTRALIA 9. FAMILY MICROHYLIDAE Thomas C. Burton 1 9. FAMILY MICROHYLIDAE Pl 1.3. Cophixalus ornatus (Microhylidae): usually found in leaf litter, this tiny frog is endemic to the wet tropics of northern Queensland. [H. Cogger] 2 9. FAMILY MICROHYLIDAE DEFINITION AND GENERAL DESCRIPTION The Microhylidae is a family of firmisternal frogs, which have broad sacral diapophyses, one or more transverse folds on the surface of the roof of the mouth, and a unique slip to the abdominal musculature, the m. rectus abdominis pars anteroflecta (Burton 1980). All but one of the Australian microhylids are small (snout to vent length less than 35 mm), and all have procoelous vertebrae, are toothless and smooth-bodied, with transverse grooves on the tips of their variously expanded digits. The terminal phalanges of fingers and toes of all Australian microhylids are T-shaped or Y-shaped (Pl. 1.3) with transverse grooves. The Microhylidae consists of eight subfamilies, of which two, the Asterophryinae and Genyophryninae, occur in the Australopapuan region. Only the Genyophryninae occurs in Australia, represented by Cophixalus (11 species) and Sphenophryne (five species). Two newly discovered species of Cophixalus await description (Tyler 1989a). As both genera are also represented in New Guinea, information available from New Guinean species is included in this chapter to remedy deficiencies in knowledge of the Australian fauna. HISTORY OF DISCOVERY The Australian microhylids generally are small, cryptic and tropical, and so it was not until 100 years after European settlement that the first species, Cophixalus ornatus, was collected, in 1888 (Fry 1912). As the microhylids are much more prominent and diverse in New Guinea than in Australia, Australian specimens have been referred to New Guinean species from the time of the early descriptions by Fry (1915), whilst revisions by Parker (1934) and Loveridge (1935) minimised the extent of endemism in Australia. -
Conservation Advice and Included This Species in the Critically Endangered Category, Effective from 04/07/2019
THREATENED SPECIES SCIENTIFIC COMMITTEE Established under the Environment Protection and Biodiversity Conservation Act 1999 The Minister approved this conservation advice and included this species in the Critically Endangered category, effective from 04/07/2019. Conservation Advice Cophixalus neglectus (Neglected Nursery Frog) Taxonomy Conventionally accepted as Cophixalus neglectus (Zweifel, 1962). Summary of assessment Conservation status Critically Endangered: Criterion 2 B1 (a),(b)(i,ii,iii,v) The highest category for which Cophixalus neglectus is eligible to be listed is Critically Endangered. Cophixalus neglectus has been found to be eligible for listing under the following categories: Criterion 2: B1 (a),(b)(i,ii,iii,v): Critically Endangered Cophixalus neglectus has been found to be eligible for listing under the Critically Endangered category. Species can be listed as threatened under state and territory legislation. For information on the listing status of this species under relevant state or territory legislation, see http://www.environment.gov.au/cgi-bin/sprat/public/sprat.pl Reason for conservation assessment by the Threatened Species Scientific Committee This advice follows assessment of new information provided to the Committee to list Cophixalus neglectus. Public consultation Notice of the proposed amendment and a consultation document was made available for public comment for 30 business days between 7 September 2018 and 22 October 2018. Any comments received that were relevant to the survival of the species were considered by the Committee as part of the assessment process. Species Information Description The Neglected Nursery Frog is a member of the family Microhylidae. The body is smooth, brown or orange-brown above, sometimes with darker flecks on the back and a narrow black bar below a faint supratympanic fold, and there is occasionally a narrow pale vertebral line. -
Amphibian Neuropeptides: Isolation, Sequence Determination and Bioactivity
Amphibian Neuropeptides: Isolation, Sequence Determination and Bioactivity A Thesis submitted for the Degree of Doctor of Philosophy in the Department of Chemistry by Vita Marie Maselli B.Sc. (Hons) July 2006 Preface ___________________________________________________________________________________________ Contents Abstract viii Statement of Originality x Acknowledgements xi List of Figures xii List of Tables xv The 20 Common Amino Acids xvi Chapter 1- Amphibians and their Peptides 1 1.1 Amphibian Peptides 1 1.1a Amphibians 1 1.1b The Role of Anuran Peptides 2 1.2 The Pharmacology of Peptides 4 1.2a Neuropeptides 5 1.2b Hormonal Peptides 7 1.2c Antibacterial Peptides 8 1.2d Anticancer Agents 9 1.2e Antifungal Peptides 9 1.2f Antimalarial Peptides 9 1.2g Pheromones 10 1.2h Miscellaneous Peptides 10 1.3 Peptide Biosynthesis 11 1.4 Methodology 12 1.4a Collection of Frog Secretions 12 1.4b Analysis by High Performance Liquid Chromatography 13 1.4c Mass Spectrometry 14 1.4d Q-TOF 2 Hybrid Quadrupole Time of Flight Mass Spectrometer 15 ii Preface ___________________________________________________________________________________________ 1.5 Peptide Sequencing 18 1.5a Positive and Negative Ion Mass Spectrometry 18 1.5b Automated Edman Sequencing 21 1.5c Enzyme Digestion 22 1.5d Determination of the C-terminal End Group 23 1.6 Bioactivity Testing 24 Chapter 2- Studies of Skin Secretions from the Crinia genus 2.1 Introduction 25 2.1a General 25 2.1b Cyclic Peptides 29 2.2 Host-Defence Compounds from Crinia riparia 30 2.2a Results 30 2.2.1a Isolation -
White-Bellied and Orange-Bellied Frogs Geocrinia Species
White-bellied and Orange-bellied Frogs Geocrinia species Conservation Status: Critically Endangered and Vulnerable Identification The white-bellied frog Geocrinia alba and orange-bellied frog Geocrinia vitellina are two small species of frogs that are endemic to Western Australia and are both restricted to small areas in the lower southwest. There are also two other Geocrinia species found in the similar habitats in the southwest. The white-bellied frog has a light brown to grey back with two parallel rows of darker brown wart-like spots along the body. The belly is white, with or without a very faint yellow wash. Toes are short and unwebbed. The males make a mating call that is a series of 11-18 rapid pulses repeated irregularly. White-bellied frog. Photo: Perth Zoo You can listen to a recording of the call on the Western Australian Museum’s website. White-bellied Length: 2.0-2.4cm (males) and 1.7cm (females) The orange-bellied frog is similar-looking to the white-bellied frog, except that it has a bright orange or egg-yolk yellow coloured belly. The males making a mating call that is a series of 9-15 slow pulses repeated irregularly. You can listen to a recording of the call on the Western Australian Museum’s website. Orange-bellied Length 2.1-2.5cm (males) 1.8cm (females) Taxonomy Orange-bellied frog. Photo: Perth Zoo Family: Myobatrachidae Genus: Geocrinia Species (white-bellied): alba Species (orange-bellied): vitellina Other common names: the orange-bellied frog is also sometimes referred to as the yellow-bellied frog, because some have a bright yellow belly rather than a bright orange belly. -
Maritime Southeast Asia and Oceania Regional Focus
November 2011 Vol. 99 www.amphibians.orgFrogLogNews from the herpetological community Regional Focus Maritime Southeast Asia and Oceania INSIDE News from the ASG Regional Updates Global Focus Recent Publications General Announcements And More..... Spotted Treefrog Nyctixalus pictus. Photo: Leong Tzi Ming New The 2012 Sabin Members’ Award for Amphibian Conservation is now Bulletin open for nomination Board FrogLog Vol. 99 | November 2011 | 1 Follow the ASG on facebook www.facebook.com/amphibiansdotor2 | FrogLog Vol. 99| November 2011 g $PSKLELDQ$UN FDOHQGDUVDUHQRZDYDLODEOH 7KHWZHOYHVSHFWDFXODUZLQQLQJSKRWRVIURP $PSKLELDQ$UN¶VLQWHUQDWLRQDODPSKLELDQ SKRWRJUDSK\FRPSHWLWLRQKDYHEHHQLQFOXGHGLQ $PSKLELDQ$UN¶VEHDXWLIXOZDOOFDOHQGDU7KH FDOHQGDUVDUHQRZDYDLODEOHIRUVDOHDQGSURFHHGV DPSKLELDQDUN IURPVDOHVZLOOJRWRZDUGVVDYLQJWKUHDWHQHG :DOOFDOHQGDU DPSKLELDQVSHFLHV 3ULFLQJIRUFDOHQGDUVYDULHVGHSHQGLQJRQ WKHQXPEHURIFDOHQGDUVRUGHUHG±WKHPRUH \RXRUGHUWKHPRUH\RXVDYH2UGHUVRI FDOHQGDUVDUHSULFHGDW86HDFKRUGHUV RIEHWZHHQFDOHQGDUVGURSWKHSULFHWR 86HDFKDQGRUGHUVRIDUHSULFHGDW MXVW86HDFK 7KHVHSULFHVGRQRWLQFOXGH VKLSSLQJ $VZHOODVRUGHULQJFDOHQGDUVIRU\RXUVHOIIULHQGV DQGIDPLO\ZK\QRWSXUFKDVHVRPHFDOHQGDUV IRUUHVDOHWKURXJK\RXU UHWDLORXWOHWVRUIRUJLIWV IRUVWDIIVSRQVRUVRUIRU IXQGUDLVLQJHYHQWV" 2UGHU\RXUFDOHQGDUVIURPRXUZHEVLWH ZZZDPSKLELDQDUNRUJFDOHQGDURUGHUIRUP 5HPHPEHU±DVZHOODVKDYLQJDVSHFWDFXODUFDOHQGDU WRNHHSWUDFNRIDOO\RXULPSRUWDQWGDWHV\RX¶OODOVREH GLUHFWO\KHOSLQJWRVDYHDPSKLELDQVDVDOOSUR¿WVZLOOEH XVHGWRVXSSRUWDPSKLELDQFRQVHUYDWLRQSURMHFWV ZZZDPSKLELDQDUNRUJ FrogLog Vol. 99 | November -
The Impact of Anchored Phylogenomics and Taxon Sampling on Phylogenetic Inference in Narrow-Mouthed Frogs (Anura, Microhylidae)
Cladistics Cladistics (2015) 1–28 10.1111/cla.12118 The impact of anchored phylogenomics and taxon sampling on phylogenetic inference in narrow-mouthed frogs (Anura, Microhylidae) Pedro L.V. Pelosoa,b,*, Darrel R. Frosta, Stephen J. Richardsc, Miguel T. Rodriguesd, Stephen Donnellane, Masafumi Matsuif, Cristopher J. Raxworthya, S.D. Bijug, Emily Moriarty Lemmonh, Alan R. Lemmoni and Ward C. Wheelerj aDivision of Vertebrate Zoology (Herpetology), American Museum of Natural History, Central Park West at 79th Street, New York, NY 10024, USA; bRichard Gilder Graduate School, American Museum of Natural History, Central Park West at 79th Street, New York, NY 10024, USA; cHerpetology Department, South Australian Museum, North Terrace, Adelaide, SA 5000, Australia; dDepartamento de Zoologia, Instituto de Biociencias,^ Universidade de Sao~ Paulo, Rua do Matao,~ Trav. 14, n 321, Cidade Universitaria, Caixa Postal 11461, CEP 05422-970, Sao~ Paulo, Sao~ Paulo, Brazil; eCentre for Evolutionary Biology and Biodiversity, The University of Adelaide, Adelaide, SA 5005, Australia; fGraduate School of Human and Environmental Studies, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan; gSystematics Lab, Department of Environmental Studies, University of Delhi, Delhi 110 007, India; hDepartment of Biological Science, Florida State University, Tallahassee, FL 32306, USA; iDepartment of Scientific Computing, Florida State University, Dirac Science Library, Tallahassee, FL 32306-4120, USA; jDivision of Invertebrate Zoology, American Museum of Natural History, Central Park West at 79th Street, New York, NY 10024, USA Accepted 4 February 2015 Abstract Despite considerable progress in unravelling the phylogenetic relationships of microhylid frogs, relationships among subfami- lies remain largely unstable and many genera are not demonstrably monophyletic. -
Bibliography and Scientific Name Index to Amphibians
lb BIBLIOGRAPHY AND SCIENTIFIC NAME INDEX TO AMPHIBIANS AND REPTILES IN THE PUBLICATIONS OF THE BIOLOGICAL SOCIETY OF WASHINGTON BULLETIN 1-8, 1918-1988 AND PROCEEDINGS 1-100, 1882-1987 fi pp ERNEST A. LINER Houma, Louisiana SMITHSONIAN HERPETOLOGICAL INFORMATION SERVICE NO. 92 1992 SMITHSONIAN HERPETOLOGICAL INFORMATION SERVICE The SHIS series publishes and distributes translations, bibliographies, indices, and similar items judged useful to individuals interested in the biology of amphibians and reptiles, but unlikely to be published in the normal technical journals. Single copies are distributed free to interested individuals. Libraries, herpetological associations, and research laboratories are invited to exchange their publications with the Division of Amphibians and Reptiles. We wish to encourage individuals to share their bibliographies, translations, etc. with other herpetologists through the SHIS series. If you have such items please contact George Zug for instructions on preparation and submission. Contributors receive 50 free copies. Please address all requests for copies and inquiries to George Zug, Division of Amphibians and Reptiles, National Museum of Natural History, Smithsonian Institution, Washington DC 20560 USA. Please include a self-addressed mailing label with requests. INTRODUCTION The present alphabetical listing by author (s) covers all papers bearing on herpetology that have appeared in Volume 1-100, 1882-1987, of the Proceedings of the Biological Society of Washington and the four numbers of the Bulletin series concerning reference to amphibians and reptiles. From Volume 1 through 82 (in part) , the articles were issued as separates with only the volume number, page numbers and year printed on each. Articles in Volume 82 (in part) through 89 were issued with volume number, article number, page numbers and year. -
Analysis of the Intcrgencric Relationships of the Australian Frog Family Myobatrachidae
Analysis of the Intcrgencric Relationships of the Australian Frog Family Myobatrachidae W. RONALD HEYER and DAVID S. LIEM SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY • NUMBER 233 SERIAL PUBLICATIONS OF THE SMITHSONIAN INSTITUTION The emphasis upon publications as a means of diffusing knowledge was expressed by the first Secretary of the Smithsonian Institution. In his formal plan for the Insti- tution, Joseph Henry articulated a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge." This keynote of basic research has been adhered to over the years in the issuance of thousands of titles in serial publications under the Smithsonian imprint, com- mencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Annals of Flight Smithsonian Contributions to Anthropology Smithsonian Contributions to Astrophysics Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to Paleobiology Smithsonian Contributions to Zoology Smithsonian Studies in History and Technology In these series, the Institution publishes original articles and monographs dealing with the research and collections of its several museums and offices and of professional colleagues at other institutions of learning. These papers report newly acquired facts, synoptic interpretations of data, or original theory in specialized fields. These pub- lications are distributed by mailing lists to libraries, laboratories, and other interested institutions and specialists throughout the world. Individual copies may be obtained from the Smithsonian Institution Press as long as stocks are available. -
Persistence in Peripheral Refugia Promotes Phenotypic Divergence and Speciation in a Rainforest Frog
The University of Chicago Persistence in Peripheral Refugia Promotes Phenotypic Divergence and Speciation in a Rainforest Frog. Author(s): Conrad J. Hoskin, Maria Tonione, Megan Higgie, Jason B. MacKenzie, Stephen E. Williams, Jeremy VanDerWal, and Craig Moritz Source: The American Naturalist, Vol. 178, No. 5 (November 2011), pp. 561-578 Published by: The University of Chicago Press for The American Society of Naturalists Stable URL: http://www.jstor.org/stable/10.1086/662164 . Accessed: 24/04/2014 19:38 Your use of the JSTOR archive indicates your acceptance of the Terms & Conditions of Use, available at . http://www.jstor.org/page/info/about/policies/terms.jsp . JSTOR is a not-for-profit service that helps scholars, researchers, and students discover, use, and build upon a wide range of content in a trusted digital archive. We use information technology and tools to increase productivity and facilitate new forms of scholarship. For more information about JSTOR, please contact [email protected]. The University of Chicago Press, The American Society of Naturalists, The University of Chicago are collaborating with JSTOR to digitize, preserve and extend access to The American Naturalist. http://www.jstor.org This content downloaded from 150.203.51.129 on Thu, 24 Apr 2014 19:38:35 PM All use subject to JSTOR Terms and Conditions vol. 178, no. 5 the american naturalist november 2011 Persistence in Peripheral Refugia Promotes Phenotypic Divergence and Speciation in a Rainforest Frog Conrad J. Hoskin,1,*,†,‡ Maria Tonione,2,* Megan Higgie,1,‡ Jason B. MacKenzie,2,§ Stephen E. Williams,3 Jeremy VanDerWal,3 and Craig Moritz2 1.