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Untangling Taxonomy: a DNA Barcode Reference Library for Canadian Spiders
Molecular Ecology Resources (2016) 16, 325–341 doi: 10.1111/1755-0998.12444 Untangling taxonomy: a DNA barcode reference library for Canadian spiders GERGIN A. BLAGOEV, JEREMY R. DEWAARD, SUJEEVAN RATNASINGHAM, STEPHANIE L. DEWAARD, LIUQIONG LU, JAMES ROBERTSON, ANGELA C. TELFER and PAUL D. N. HEBERT Biodiversity Institute of Ontario, University of Guelph, Guelph, ON, Canada Abstract Approximately 1460 species of spiders have been reported from Canada, 3% of the global fauna. This study provides a DNA barcode reference library for 1018 of these species based upon the analysis of more than 30 000 specimens. The sequence results show a clear barcode gap in most cases with a mean intraspecific divergence of 0.78% vs. a min- imum nearest-neighbour (NN) distance averaging 7.85%. The sequences were assigned to 1359 Barcode index num- bers (BINs) with 1344 of these BINs composed of specimens belonging to a single currently recognized species. There was a perfect correspondence between BIN membership and a known species in 795 cases, while another 197 species were assigned to two or more BINs (556 in total). A few other species (26) were involved in BIN merges or in a combination of merges and splits. There was only a weak relationship between the number of specimens analysed for a species and its BIN count. However, three species were clear outliers with their specimens being placed in 11– 22 BINs. Although all BIN splits need further study to clarify the taxonomic status of the entities involved, DNA bar- codes discriminated 98% of the 1018 species. The present survey conservatively revealed 16 species new to science, 52 species new to Canada and major range extensions for 426 species. -
Spider Records from Colin-Cornwall Lakes Wildland Provincial Park
SPIDER RECORDS FROM COLIN-CORNWALL LAKES WILDLAND PROVINCIAL PARK Larinioides cornutus Thanatus coloradensis (Photo by D. Buckle) (Photo by D. Buckle) Prepared by Wayne Nordstrom1 and Don Buckle2 March 2004 1Alberta Natural Heritage Information Centre Parks and Protected Areas Division Alberta Community Development 2 620 Albert Avenue Saskatoon, SK S7N 1G7 Table of Contents 1. Introduction.................................................................................................................................. 1 2. The Study Site.............................................................................................................................. 1 3. Methods ....................................................................................................................................... 3 3.1 Survey Dates....................................................................................................................... 3 3.2 Collection of Spiders .......................................................................................................... 3 3.3 Identification of Spiders ..................................................................................................... 4 4. Results and Discussion ................................................................................................................ 4 5. Conclusion ...................................................................................................................................11 6. Acknowlegements........................................................................................................................11 -
Effects of Climate Change on Arctic Arthropod Assemblages and Distribution Phd Thesis
Effects of climate change on Arctic arthropod assemblages and distribution PhD thesis Rikke Reisner Hansen Academic advisors: Main supervisor Toke Thomas Høye and co-supervisor Signe Normand Submitted 29/08/2016 Data sheet Title: Effects of climate change on Arctic arthropod assemblages and distribution Author University: Aarhus University Publisher: Aarhus University – Denmark URL: www.au.dk Supervisors: Assessment committee: Arctic arthropods, climate change, community composition, distribution, diversity, life history traits, monitoring, species richness, spatial variation, temporal variation Date of publication: August 2016 Please cite as: Hansen, R. R. (2016) Effects of climate change on Arctic arthropod assemblages and distribution. PhD thesis, Aarhus University, Denmark, 144 pp. Keywords: Number of pages: 144 PREFACE………………………………………………………………………………………..5 LIST OF PAPERS……………………………………………………………………………….6 ACKNOWLEDGEMENTS……………………………………………………………………...7 SUMMARY……………………………………………………………………………………...8 RESUMÉ (Danish summary)…………………………………………………………………....9 SYNOPSIS……………………………………………………………………………………....10 Introduction……………………………………………………………………………………...10 Study sites and approaches……………………………………………………………………...11 Arctic arthropod community composition…………………………………………………….....13 Potential climate change effects on arthropod composition…………………………………….15 Arctic arthropod responses to climate change…………………………………………………..16 Future recommendations and perspectives……………………………………………………...20 References………………………………………………………………………………………..21 PAPER I: High spatial -
Spiders (Araneae) of Churchill, Manitoba: DNA Barcodes And
Blagoev et al. BMC Ecology 2013, 13:44 http://www.biomedcentral.com/1472-6785/13/44 RESEARCH ARTICLE Open Access Spiders (Araneae) of Churchill, Manitoba: DNA barcodes and morphology reveal high species diversity and new Canadian records Gergin A Blagoev1*, Nadya I Nikolova1, Crystal N Sobel1, Paul DN Hebert1,2 and Sarah J Adamowicz1,2 Abstract Background: Arctic ecosystems, especially those near transition zones, are expected to be strongly impacted by climate change. Because it is positioned on the ecotone between tundra and boreal forest, the Churchill area is a strategic locality for the analysis of shifts in faunal composition. This fact has motivated the effort to develop a comprehensive biodiversity inventory for the Churchill region by coupling DNA barcoding with morphological studies. The present study represents one element of this effort; it focuses on analysis of the spider fauna at Churchill. Results: 198 species were detected among 2704 spiders analyzed, tripling the count for the Churchill region. Estimates of overall diversity suggest that another 10–20 species await detection. Most species displayed little intraspecific sequence variation (maximum <1%) in the barcode region of the cytochrome c oxidase subunit I (COI) gene, but four species showed considerably higher values (maximum = 4.1-6.2%), suggesting cryptic species. All recognized species possessed a distinct haplotype array at COI with nearest-neighbour interspecific distances averaging 8.57%. Three species new to Canada were detected: Robertus lyrifer (Theridiidae), Baryphyma trifrons (Linyphiidae), and Satilatlas monticola (Linyphiidae). The first two species may represent human-mediated introductions linked to the port in Churchill, but the other species represents a range extension from the USA. -
Spider Records from Caribou Mountains Wildland Provincial Park
SPIDER RECORDS FROM CARIBOU MOUNTAINS WILDLAND PROVINCIAL PARK Xysticus emertoni Dolomedes triton (Photo: D. Buckle) (Photo: R. Holmberg) Prepared by Wayne R. Nordstrom1 and Donald J. Buckle2 March 2006 1Alberta Natural Heritage Information Centre Parks and Protected Areas Division Alberta Community Development 2 620 Albert Avenue Saskatoon, SK S7N 1G7 Table of Contents 1. Introduction.................................................................................................................................. 1 2. The Study Site.............................................................................................................................. 1 3. Methods ....................................................................................................................................... 4 3.1 Survey Dates....................................................................................................................... 4 3.2 Collection of Spiders .......................................................................................................... 4 3.3 Identification of Spiders ..................................................................................................... 4 4. Results and Discussion................................................................................................................ 4 5. Conclusion ................................................................................................................................... 9 6. Acknowlegements....................................................................................................................... -
19 4 273 282 Tanasevitch2 for Inet.P65
Arthropoda Selecta 19(4): 273282 © ARTHROPODA SELECTA, 2010 On synonymy of linyphiid spiders of the Russian fauna (Arachnida: Aranei: Linyphiidae). 1 Î ñèíîíèìèè ïàóêîâ-ëèíèôèèä ôàóíû Ðîññèè (Arachnida: Aranei: Linyphiidae). 1 Andrei V. Tanasevitch À.Â. Òàíàñåâè÷ Centre for Forest Ecology and Production, Russian Academy of Sciences, Profsoyuznaya Str. 84/32, Moscow 117997 Russia. E-mail: and- [email protected] Öåíòð ïî ïðîáëåìàì ýêîëîãèè è ïðîäóêòèâíîñòè ëåñîâ ÐÀÍ, Ïðîôñîþçíàÿ óë. 84/32, Ìîñêâà 117997 Ðîññèÿ. E-mail: and- [email protected] KEY WORDS: Spiders, Linyphiidae, new synonym, new combination, Russian fauna. ÊËÞ×ÅÂÛÅ ÑËÎÂÀ: Ïàóêè, Linyphiidae, íîâûé ñèíîíèì, íîâàÿ êîìáèíàöèÿ, ôàóíà Ðîññèè. ABSTRACT. Seven new synonyms are established Introduction for the Russian fauna: Agyneta yakutsaxatilis Marusik et Koponen, 2002, syn.n. = Agyneta amersaxatilis Hundreds of new taxa of the linyphiid spiders have Saaristo et Koponen, 1998; Bolyphantes palaeformis been described during the last three decades from the (Tanasevitch, 1989), syn.n. = Bolyphantes bipartitus territory of the former Soviet Union, mainly from the (Tanasevitch, 1989), both comb.n. (ex Lepthyphantes Caucasus, Siberia, the Far East and Central Asia. A Menge, 1866); Epigytholus tuvensis Tanasevitch, 1996, significant progress in the taxonomy of the family syn.n. = Epigytholus kaszabi (Wunderlich, 1995), Linyphiidae, as well as abundant material from various comb.n. (ex Lepthyphantes); Hybauchenidium holmi Palearctic regions which has been recently accumulated, Marusik, 1988, syn.n. = Hybauchenidium aquilonare allow one to not only critically consider some of the (L. Koch, 1879); Poeciloneta yanensis Marusik et Ko- earlier described species and genera but also, in some ponen, 2002, syn.n. = Poeciloneta variegata (Black- cases, to dispel any doubts in their invalidity. -
196 Arachnology (2019)18 (3), 196–212 a Revised Checklist of the Spiders of Great Britain Methods and Ireland Selection Criteria and Lists
196 Arachnology (2019)18 (3), 196–212 A revised checklist of the spiders of Great Britain Methods and Ireland Selection criteria and lists Alastair Lavery The checklist has two main sections; List A contains all Burach, Carnbo, species proved or suspected to be established and List B Kinross, KY13 0NX species recorded only in specific circumstances. email: [email protected] The criterion for inclusion in list A is evidence that self- sustaining populations of the species are established within Great Britain and Ireland. This is taken to include records Abstract from the same site over a number of years or from a number A revised checklist of spider species found in Great Britain and of sites. Species not recorded after 1919, one hundred years Ireland is presented together with their national distributions, before the publication of this list, are not included, though national and international conservation statuses and syn- this has not been applied strictly for Irish species because of onymies. The list allows users to access the sources most often substantially lower recording levels. used in studying spiders on the archipelago. The list does not differentiate between species naturally Keywords: Araneae • Europe occurring and those that have established with human assis- tance; in practice this can be very difficult to determine. Introduction List A: species established in natural or semi-natural A checklist can have multiple purposes. Its primary pur- habitats pose is to provide an up-to-date list of the species found in the geographical area and, as in this case, to major divisions The main species list, List A1, includes all species found within that area. -
Meter Scale Variation in Shrub Dominance and Soil Moisture Structure Arctic Arthropod Communities
Meter scale variation in shrub dominance and soil moisture structure Arctic arthropod communities Rikke Reisner Hansen1,2, Oskar Liset Pryds Hansen1,2, Joseph J. Bowden1, Urs A. Treier1,3,4, Signe Normand1,3,4 and Toke Høye1,2,5 1 Arctic Research Centre, Department of Bioscience, Aarhus University, Aarhus C, Denmark 2 Department of Bioscience, Kalø, Aarhus University, Rønde, Denmark 3 Ecoinformatics & Biodiversity, Department of Bioscience, Aarhus University, Aarhus, Denmark 4 Swiss Federal Institute for Forest, Snow and Landscape Research, Birmensdorf, Switzerland 5 Aarhus Institute of Advanced Studies, Aarhus University, Aarhus, Denmark ABSTRACT The Arctic is warming at twice the rate of the rest of the world. This impacts Arctic species both directly, through increased temperatures, and indirectly, through structural changes in their habitats. Species are expected to exhibit idiosyncratic responses to structural change, which calls for detailed investigations at the species and community level. Here, we investigate how arthropod assemblages of spiders and beetles respond to variation in habitat structure at small spatial scales. We sampled transitions in shrub dominance and soil moisture between three different habitats (fen, dwarf shrub heath, and tall shrub tundra) at three different sites along a fjord gradient in southwest Greenland, using yellow pitfall cups. We identified 2,547 individuals belonging to 47 species. We used species richness estimation, indicator species analysis and latent variable modeling to examine differences in arthropod community structure in response to habitat variation at local (within site) and regional scales (between sites). We estimated species responses to the environment by fitting species-specific generalized linear models with Submitted 5May2016 environmental covariates. -
A New Species of Incestophantes Tanasevitch, 1992 from the High Mountains of the Caucasus Major (Arachnida: Aranei: Linyphiidae)
Arthropoda Selecta 24(1): 107–112 © ARTHROPODA SELECTA, 2015 A new species of Incestophantes Tanasevitch, 1992 from the high mountains of the Caucasus Major (Arachnida: Aranei: Linyphiidae) Íîâûé âèä Incestophantes Tanasevitch, 1992 èç âûñîêîãîðèé Áîëüøîãî Êàâêàçà (Arachnida: Aranei: Linyphiidae) Stefan Otto*, Andrei V. Tanasevitch** Ñ. Îòòî, À.Â. Òàíàñåâè÷ * GutsMuthsstrasse, 42, Leipzig 04177, Germany. E-mail: [email protected] (Corresponding author) ** Institute of Ecology and Evolution, Russian Academy of Sciences, Leninsky Prospect, 33, Moscow 119071, Russia. ** Институт проблем экологии и эволюции РАН, Ленинский проспект, 33, Москва, 119071 Россия. KEY WORDS: spiders, new species, Micronetinae, Caucasus, Georgia, alpine belt. КЛЮЧЕВЫЕ СЛОВА: пауки, новый вид, Micronetinae, Кавказ, Грузия, альпийский пояс. ABSTRACT. The new species, Incestophantes sh- Material and methods etekaurii sp.n., is described from the high mountains of the Caucasus Major (Georgia, 2500 m a.s.l.). This new The paper is based on spider material collected by species is similar to the European-West Siberian I. Stefan Otto during a field trip to Khevsureti region in crucifer (Menge, 1866) and to the Crimean I. australis Georgia in July 2013. The type specimens are deposit- Gnelitsa, 2009, but differs noticeably in the details of ed in the arachnological collection of the Berlin Muse- the genitalia in both sexes. The generic position of um of Natural History (ZMB). Bolyphantes lagodekhensis (Tanasevitch, 1990), and Measurements and drawings were made using a Zeiss its differences to I. shetekaurii sp.n., is briefly dis- SZ 6 stereomicroscope at 50x magnification (all figures cussed and illustrated. except Fig. 2b) and a Carl Zeiss Jena LgOG1 at 200x magnification prepared on slide with cover slip (Fig. -
Untangling Taxonomy: a DNA Barcode Reference Library for Canadian Spiders
Received Date : 14-Mar-2015 Revised Date : 30-Jun-2015 Accepted Date : 06-Jul-2015 Article type : Resource Article Untangling Taxonomy: A DNA Barcode Reference Library for Canadian Spiders Gergin A. Blagoev Jeremy R. deWaard* Sujeevan Ratnasingham Article Stephanie L. deWaard Liuqiong Lu James Robertson Angela C. Telfer Paul D. N. Hebert Biodiversity Institute of Ontario, University of Guelph, Guelph, ON, Canada * Corresponding author E-mail: [email protected] This article has been accepted for publication and undergone full peer review but has not been through the copyediting, typesetting, pagination and proofreading process, which may lead to differences between this version and the Version of Record. Please cite this article as doi: Accepted 10.1111/1755-0998.12444 This article is protected by copyright. All rights reserved. Keywords: DNA barcoding, spiders, Araneae, species identification, Barcode Index Numbers, Operational Taxonomic Units Abstract Approximately 1460 species of spiders have been reported from Canada, 3% of the global fauna. This study provides a DNA barcode reference library for 1018 of these species based upon the analysis of more than 30,000 specimens. The sequence results show a clear barcode gap in most cases with a mean intraspecific divergence of 0.78% versus a minimum nearest-neighbour (NN) distance averaging 7.85%. The sequences were assigned to 1359 Barcode Index Numbers (BINs) with 1344 of these BINs composed of specimens belonging to a single currently recognized Article species. There was a perfect correspondence between BIN membership and a known species in 795 cases while another 197 species were assigned to two or more BINs (556 in total). -
Пауки (Arachnida: Aranei) Природных Парков Камчатки: Фауна, Экология, Зоогеография
Е. М. Ненашева ППААУУККИИ ((AARRAACCHHNNIIDDAA:: AARRAANNEEII)) ППРРИИРРООДДННЫЫХХ ППААРРККООВВ ККААММЧЧААТТККИИ:: ФФААУУННАА,, ЭЭККООЛЛООГГИИЯЯ,, ЗЗООООГГЕЕООГГРРААФФИИЯЯ Федеральное государственное бюджетное образовательное учреждение высшего образования «Камчатский государственный технический университет» Е. М. Ненашева ПАУКИ (ARACHNIDA: ARANEI) ПРИРОДНЫХ ПАРКОВ КАМЧАТКИ: ФАУНА, ЭКОЛОГИЯ, ЗООГЕОГРАФИЯ Монография Издательство КамчатГТУ Петропавловск-Камчатский 2020 УДК 595.44(571.66) ББК 28.691 Н51 Рецензент: А. М. Токранов, доктор биологических наук, директор Камчатского филиала Тихоокеанского института географии ДВО РАН Ненашева, Елена Михайловна Н51 Пауки (Arachnida: Aranei) природных парков Камчатки: фауна, экология, зоогео- графия : монография / Е. М. Ненашева. – Петропавловск-Камчатский : КамчатГТУ, 2020. – 139 с. ISBN 978-5-328-00403-9 До настоящего времени сведения по экологии пауков на территории Камчатского края крайне ограничены и фрагментарны, поскольку специальные арахнологические исследо- вания фаунистического характера на полуострове проводили более 80 лет назад. Моно- графия представляет собой первое эколого-фаунистическое исследование фауны пауков (Arachnida: Aranei) на территориях природных парков Камчатки. В ней рассмотрены во- просы ареалогии, зоогеографии и экологии 167 видов из 17 семейств пауков. Впервые для полуострова показаны биотопическое и высотно-поясное распределение видов (в том чис- ле в горно-вулканических и термальных экосистемах), а также отдельные стадии жизнен- ных циклов и сезонная динамика численности -
“There Would Doubtless Be a Just Feeling of Pride
“There would doubtless be a just feeling of pride and satisfaction in the heart of a naturalist who could say that he had made himself thoroughly acquainted with all the species of a particular group of animals, had learned their most secret habits, and mastered their several relations to the objects, animate and inanimate, which surrounded them. But perhaps a still keener pleasure is enjoyed by one who carries about with him some problem of the kind but partially solved, and who, holding in his hand the clue which shall guide him onwards, sees in each new place that he visits fresh opportunities of discovery.” J. Traherne Moggridge Harvesting Ants and Trap-door Spiders, page 180 Saville, Edwards and Co., London 1874 University of Alberta Composition and structure of spider assemblages in layers of the mixedwood boreal forest after variable retention harvest by Jaime H. Pinzón A thesis submitted to the Faculty of Graduate Studies and Research in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Wildlife Ecology and Management Department of Renewable Resources ©Jaime H. Pinzón Fall 2011 Edmonton, Alberta Permission is hereby granted to the University of Alberta Libraries to reproduce single copies of this thesis and to lend or sell such copies for private, scholarly or scientific research purposes only. Where the thesis is converted to, or otherwise made available in digital form, the University of Alberta will advise potential users of the thesis of these terms. The author reserves all other publication and other rights in association with the copyright in the thesis and, except as herein before provided, neither the thesis nor any substantial portion thereof may be printed or otherwise reproduced in any material form whatsoever without the author's prior written permission.