Cellular and Humoral Immunity in Malaria Pre-Exposed Tanzanian
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Cellular and humoral immunity in malaria pre-exposed Tanzanian children and adults following vaccination with RTS,S, the most advanced malaria vaccine, and after whole sporozoite based controlled human malaria infections INAUGURALDISSERTATION zur Erlangung der Würde eines Doktors der Philosophie vorgelegt der Philosophisch-Naturwissenschaftlichen Fakultät der Universität Basel von Maxmillian Gideon Mpina Aus Sumbawanga, Rukwa, United Republic of Tanzania Basel, 2018 Genehmigt von der Philosophisch-Naturwissenschaftlichen Fakultät auf Antrag von Prof. Dr. Marcel Tanner, Prof. Dr. Claudia Daubenberger, Prof. Dr. Steffen Borrmann Basel, den 13. December 2016 Prof. Dr. Jörg Schibler Dekan ……..to my beloved wife, children, parents, brothers and sisters. Table of Contents CHAPTER 1: Introduction ........................................................................................ 1 1.1. Malaria : Overview ........................................................................................... 1 1.1.1. The parasite .............................................................................................. 1 1.1.1.1. Plasmodium falciparum……………………………….…………….2 1.1.1.2. Plasmodium vivax ..………………………………………..2 1.1.1.3. Plasmodium ovale …………………………………………...3 1.1.1.4. Plasmodium malariae ……………………………………………..3 1.1.1.5. Plasmodium knowlesi………………………………………………..4 1.1.2. Epidemiology of Plasmodium falciparum .................................................. 4 1.1.3. Life cycle of Plasmodium falciparum malaria ............................................ 5 1.1.4. Pathogenesis of Plasmodium falciparum malaria...................................... 7 1.1.5. Malaria diagnosis ...................................................................................... 9 1.1.6. Current malaria control strategies ........................................................... 11 1.1.6.1. Malaria vector control ……………………………………………..12 1.1.6.2. Malaria treatment…..………………………………………………12 1.1.6.3. Malaria vaccines ………..………………………………………….13 1.2. Immune responses against malaria ............................................................... 14 1.2.1. Humoral immunity against malaria .......................................................... 14 1.2.2. Cellular immunity against malaria ........................................................... 15 1.3. Malaria pre-existing responses and the magnitude of vaccine induced immunity .......................................................................................................... 17 1.4. Malaria vaccines development ...................................................................... 17 1.4.1. Pre-erythrocytic malaria vaccine approaches ......................................... 19 1.4.1.1. Recombinant pre-erythrocytic vaccine approaches ……………20 1.4.1.2. Viral vectored pre-erythrocytic vaccine approaches …………...23 1.4.2. DNA vaccine approaches ....................................................................... 25 1.4.3. The live attenuated whole parasite based vaccine approaches .............. 25 1.4.4. Blood stage malaria vaccine approaches ................................................ 26 1.4.5. Malaria transmission blocking vaccines (TBV) ........................................ 29 1.5. Controlled human malaria infection in malaria endemic countries ................. 29 CHAPTER 2: Rationale and research questions ................................................. 47 CHAPTER 3: Aim of the thesis and approaches.................................................. 50 iv CHAPTER 4: Investigation of vaccine efficacy and cellular and humoral immunity in RTS,S/AS01E vaccinated volunteers in Tanzania .......................... 52 4.1. Paper I: A phase 3 trial of RTS,S/AS01E malaria vaccine in African infants .. 53 4.2. Paper II: The effect of immunization schedule with the malaria vaccine candidate RTS,S/AS01E on protective efficacy and anti-circumsporozoite protein antibody avidity in African children ........................................................................ 66 4.3. Paper III: Distinct helper T cell type 1 and 2 responses associated with malaria protection and risk in RTS,S/AS01E vaccines ...................................................... 73 4.4. Paper IV: Mal067 ancillary immunology study of the phase 3 RTS,S/AS01E vaccine trial in Bagamoyo: The implication for immunological sampling of African paediatrics ............................................................................................................. 84 CHAPTER 5: Controlled human malaria infections as a tool to accelerate malaria vaccine development in Africa and to dissect malaria specific immunity .............................................................................................................. 104 5.1. Paper V: Controlled human malaria infection of Tanzanians by intradermal injection of aseptic, purified, cryopreserved Plasmodium falciparum sporozoites 105 5.2. Paper VI: Impact of malaria pre-exposure on anti-parasite cellular and humoral immune responses after controlled human malaria infection .............................. 117 5.3. Paper VII: Controlled human malaria infection boots pre-erythrocytic stage transcending and merozoite opsonizing antibody in malaria semi-immune Tanzanian adults ................................................................................................. 130 5.4. Paper VIII: Controlled human malaria infection leads to long-lasting changes in innate and innate-like lymphocyte populations .................................................... 155 CHAPTER 6: Discussion, conclusion and recommendations .......................... 172 6.1. General discussion ....................................................................................... 173 6.1.1. Investigation of safety, efficacy and immunogenicity of RTS,S/AS01 vaccine in Tanzania paediatric population ....................................................... 173 6.1.2. Controlled human malaria infection as a cornerstone to accelerate malaria vaccine development in Africa ............................................................................ 181 6.2. Conclusion ................................................................................................... 186 6.3. Recommendations ....................................................................................... 187 6.4. Contribution of the current thesis ................................................................. 188 CHAPTER 7: PhD supplementary work and curriculum vitae .......................... 194 7.1. Appendices .................................................................................................. 195 v 7.1.1. Assessment of the novel T-cell activation marker-tuberculosis assay for diagnosis of active tuberculosis in children: a prospective proof-of-concept study ................................................................................................................ 196 7.1.2. Antiviral innate immune activation in HIV-infected adults negatively affects HIV/IC31- induced vaccine specific memory CD4+ T cells ............................... 204 7.1.3. Maturation and MIP-1 beta production of cytomegalovirus-specific T cell responses in Tanzanian children, adolescents and adults: Impact by HIV and Mycobacterium tuberculosis co-infections........................................................ 213 vi Table of figures Table of figures Figure 1: Global distribution of P. falciparum and P vivax by countries ............................... 1 Figure 2: Plasmodium species life cycle in both mosquito vector and human host .............7. Figure 3: A series of pathogenesis that is suggested to occur during different stages of malaria parasite life cycle in human host ............................................................. 9 Figure 4: Stages in P. falciparum life cycle that are deemed potential target for vaccine development ...................................................................................................... 19 Figure 5: Schematic representation of RTS, S vaccine particle assembly ........................ 22 vii List of abbreviations List of abbreviations ACT Artemisinin-based Combination Therapy AMA Apical membrane antigen CelTOS Cell-traversal protein for ookinetes and sporozoites CHMI Controlled human malaria infection CSA Chondroitin sulfate A CSP Circumsporozoite Protein DDT Dichlorodiphenyltrichloroethane DNA Deoxyribonucleic Acid ELISA Enzyme Linked Immuno-Sorbent Assay ICAM1 Intracellular adhesion molecule1 IFN Interferon gamma IHI Ifakara Health Institute IL Interleukin IRBCs Infected Red Blood cells ITNs Insecticide-Treated Nets IRS Indoor Residual Spraying ITTP Intent to treat population PPP Per protocol population LLITNs Long Lasting Insecticide-Treated Nets LSA Liver stage antigen MDGs Millennium Development Goals MVI Malaria Vaccine Initiative NIMR National Institute for Medical Research PATH Program for Appropriate Technology in Health RBCs Red Blood cells WHO World Health Organization viii List of abbreviations LAMP Loop-mediated isothermal amplification mRDT Malaria Rapid Diagnostic Tests MSP Merozoite surface protein PfEMP1 Plasmodium falciparum erythrocyte membrane protein1 PfHRP2 Plasmodium falciparum Histidine-Rich Protein2 PLDH Plasmodium Lactate Dehydrogenase PCR Polymerase chain reaction qPCR Quantitative polymerase chain reaction qtr-PCR Quantitative reverse transcriptase polymerase chain reaction RNA Ribonucleic Acid Swiss-TPH Swiss Tropical and Public Health institute SSP Sporozoites surface protein