Pallial Origin of Basal Forebrain Cholinergic Neurons in the Nucleus
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The Effect of Nucleus Basalis Magnocellularis Deep Brain
Lee et al. BMC Neurology (2016) 16:6 DOI 10.1186/s12883-016-0529-z RESEARCH ARTICLE Open Access The effect of nucleus basalis magnocellularis deep brain stimulation on memory function in a rat model of dementia Ji Eun Lee1†, Da Un Jeong1†, Jihyeon Lee1, Won Seok Chang2 and Jin Woo Chang1,2* Abstract Background: Deep brain stimulation has recently been considered a potential therapy in improving memory function. It has been shown that a change of neurotransmitters has an effect on memory function. However, much about the exact underlying neural mechanism is not yet completely understood. We therefore examined changes in neurotransmitter systems and spatial memory caused by stimulation of nucleus basalis magnocellularis in a rat model of dementia. Methods: We divided rats into four groups: Normal, Lesion, Implantation, and Stimulation. We used 192 IgG-saporin for degeneration of basal forebrain cholinergic neuron related with learning and memory and it was injected into all rats except for the normal group. An electrode was ipsilaterally inserted in the nucleus basalis magnocellularis of all rats of the implantation and stimulation group, and the stimulation group received the electrical stimulation. Features were verified by the Morris water maze, immunochemistry and western blotting. Results: AllgroupsshowedsimilarperformancesduringMorriswater maze training. During the probe trial, performance of the lesion and implantation group decreased. However, the stimulation group showed an equivalent performance to the normal group. In the lesion and implantation group, expression of glutamate acid decarboxylase65&67 decreased in the medial prefrontal cortex and expression of glutamate transporters increased in the medial prefrontal cortex and hippocampus. However, expression of the stimulation group showed similar levels as the normal group. -
What, If Anything, Is Rodent Prefrontal Cortex?
Review Cognition and Behavior What, If Anything, Is Rodent Prefrontal Cortex? Mark Laubach,1 Linda M. Amarante,1 Kyra Swanson,1 and Samantha R. White1 https://doi.org/10.1523/ENEURO.0315-18.2018 1Department of Biology and Center for Behavioral Neuroscience, American University, Washington, DC 20016 Visual Abstract Prefrontal cortex (PFC) means different things to different people. In recent years, there has been a major increase in publications on the PFC, especially using mice. However, inconsistencies in the nomenclature and anatomical boundaries of PFC areas has made it difficult for researchers to compare data and interpret findings across species. We conducted a meta-analysis of publications on the PFC of humans and rodents and found dramatic differences in the focus of research on these species. In addition, we compared anatomical terms and criteria across several common rodent brain atlases and found inconsistencies among, and even within, leading atlases. To assess the impact of these issues on the research community, we conducted a survey of established PFC researchers on their use of anatomical terms and found little consensus. We report on the results of the survey and propose an alternative scheme for interpreting data Significance Statement Studies on prefrontal parts of the rodent cerebral cortex have appeared at an increasing rate in recent years. However, there has been no consensus on the terms used to describe the rodent prefrontal cortex (PFC) or how it relates to the PFC of monkeys and humans. To address these issues, we conducted a meta-analysis of publications on the PFC across species, a review of rodent brain atlases, a survey of PFC researchers on anatomic terms, and an analysis of how species differences in the corpus callosum might help relate PFC areas across species. -
Intersection of Structural and Functional Connectivity of the Nucleus Basalis of Meynert in Parkinson's Disease Dementia and L
bioRxiv preprint doi: https://doi.org/10.1101/2020.07.27.221853; this version posted July 28, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Intersection of structural and functional connectivity of the nucleus basalis of Meynert in Parkinson’s disease dementia and Lewy body dementia. Authors: Ashwini Oswala,b,c*†, James Gratwicked†, Harith Akramd, Marjan Jahanshahid, Laszlo Zaborszkye, Peter Browna,b , Marwan Harizd,f, Ludvic Zrinzod, Tom Foltynied, Vladimir Litvakc †Denotes equal contribution to Authorship Affiliations: a Medical Research Brain Network Dynamics Unit, University of Oxford, Oxford, UK b Nuffield Department of Clinical Neurosciences, John Radcliffe Hospital, Oxford, UK c Wellcome Trust Centre for Neuroimaging, UCL Institute of Neurology, 12 Queen Square, London, UK d Department of Clinical & Movement Neurosciences, UCL Institute of Neurology and The National Hospital for Neurology and Neurosurgery, Queen Square, London, UK e Center for Molecular and Behavioral Neuroscience, Rutgers University, USA f Department of Clinical Neuroscience, Umeå University, Umeå, Sweden To whom correspondence should be addressed: [email protected] or [email protected] bioRxiv preprint doi: https://doi.org/10.1101/2020.07.27.221853; this version posted July 28, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. -
The Virtual Mouse Brain: a Computational Neuroinformatics Platform to Study Whole Mouse Brain Dynamics
bioRxiv preprint doi: https://doi.org/10.1101/123406; this version posted April 3, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. The Virtual Mouse Brain: a computational neuroinformatics platform to study whole mouse brain dynamics Francesca Melozzi, Marmaduke M. Woodman, Viktor K. Jirsa∗, Christophe Bernard∗ Aix Marseille Univ, Inserm, INS, Institut de Neurosciences des Systèmes, Marseille, France ∗equally contributing last authors Correspondence author: [email protected] Abstract Connectome-based modeling of large-scale brain network dynamics enables causal in silico interrogation of the brain’s structure-function relationship, necessitating the close integration of diverse neuroinformatics fields. Here we extend the open-source simulation software The Virtual Brain to whole mouse brain network modeling based on individual diffusion Magnetic Resonance Imaging (dMRI)-based or tracer-based detailed mouse connectomes. We provide practical examples on how to use The Virtual Mouse Brain to simulate brain activity, such as seizure propagation and the switching behavior of the resting state dynamics in health and disease. The Virtual Mouse Brain enables theoretically driven experimental planning and ways to test predictions in the numerous strains of mice available to study brain function in normal and pathological conditions. Introduction -
Rh]DIAZEPAM BINDING in MAMMALIAN CENTRAL NERVOUS SYSTEM: a PHARMACOLOGICAL CHARACTERIZATION
0270-6474/81/0102-0218$02.00/O The Journal of Neuroscience Copyright 0 Society for Neuroscience Vol. 1, No. 2, pp. 218-225 Printed in U.S.A. February 1981 rH]DIAZEPAM BINDING IN MAMMALIAN CENTRAL NERVOUS SYSTEM: A PHARMACOLOGICAL CHARACTERIZATION DOROTHY W. GALLAGER,*, ’ PIERRE MALLORGA,* WOLFGANG OERTEL,# RICHARD HENNEBERRY,$ AND JOHN TALLMAN* * Biological Psychiatry Branch, National Institute of Mental Health, $Laboratory of Clinical Science, National Institute of Mental Health, and SLaboratory of Molecular Biology, National Institute of General Medical Sciences, Bethesda, Maryland 20205 Abstract Two types of benzodiazepine binding sites for [3H]diazepam in mammalian central nervous tissue were identified using selective in vitro tissue culture and in situ kainic acid lesion techniques. These two binding sites were pharmacologically distinguished by differential displacement of the [3H]diazepam radioligand using the centrally active benzodiazepine, clonazepam, and the centrally inactive benzodiazepine, R05-4864. Clonazepam-displaceable binding sites were found to be located principally on neuronal membranes, while R05-4864-displaceable binding sites were found to be located on non-neuronal elements. These pharmacological distinctions can be used to characterize the predominant cell types which bind benzodiazepines in nervous tissue. It is suggested that one quantitative measure of different cell populations is the ratio of clonazepam- to R05-4864-displaceable [3H]diazepam binding within a single neuronal tissue sample. Binding sites for benzodiazepines in brain which have sites on the kidney cells, although possessing a high high affinity and show saturability and stereospecificity affinity for [3H]diazepam, showed an entirely different have been described (Squires and Braestrup, 1977; Moh- pharmacological spectrum from the brain site. -
High-Resolution Data-Driven Model of the Mouse Connectome
RESEARCH High-resolution data-driven model of the mouse connectome Joseph E. Knox1,2, Kameron Decker Harris 2,3, Nile Graddis1, Jennifer D. Whitesell 1, Hongkui Zeng 1, Julie A. Harris1, Eric Shea-Brown 1,2, and Stefan Mihalas 1,2 1Allen Institute for Brain Science, Seattle, Washington, USA 2Applied Mathematics, University of Washington, Seattle, Washington, USA 3Computer Science and Engineering, University of Washington, Seattle, Washington, USA Keywords: Connectome, Whole-brain, Mouse an open access journal ABSTRACT Knowledge of mesoscopic brain connectivity is important for understanding inter- and intraregion information processing. Models of structural connectivity are typically constructed and analyzed with the assumption that regions are homogeneous. We instead use the Allen Mouse Brain Connectivity Atlas to construct a model of whole-brain connectivity at the scale of 100 µm voxels. The data consist of 428 anterograde tracing experiments in wild type C57BL/6J mice, mapping fluorescently labeled neuronal projections brain-wide. Inferring spatial connectivity with this dataset is underdetermined, since the approximately 2 × 105 source voxels outnumber the number of experiments. Citation: Knox, J. E., Harris, K. D., To address this issue, we assume that connection patterns and strengths vary smoothly Graddis, N., Whitesell, J. D., Zeng, H., Harris, J. A., Shea-Brown, E., & across major brain divisions. We model the connectivity at each voxel as a radial basis Mihalas, S. (2019). High-resolution data-driven model of the mouse kernel-weighted average of the projection patterns of nearby injections. The voxel model connectome. Network Neuroscience, outperforms a previous regional model in predicting held-out experiments and compared 3(1), 217–236. -
Haploinsufficiency of Autism Causative Gene Tbr1 Impairs Olfactory
Huang et al. Molecular Autism (2019) 10:5 https://doi.org/10.1186/s13229-019-0257-5 RESEARCH Open Access Haploinsufficiency of autism causative gene Tbr1 impairs olfactory discrimination and neuronal activation of the olfactory system in mice Tzyy-Nan Huang1†, Tzu-Li Yen1†, Lily R. Qiu2, Hsiu-Chun Chuang1,4, Jason P. Lerch2,3 and Yi-Ping Hsueh1* Abstract Background: Autism spectrum disorders (ASD) exhibit two clusters of core symptoms, i.e., social and communication impairment, and repetitive behaviors and sensory abnormalities. Our previous study demonstrated that TBR1, a causative gene of ASD, controls axonal projection and neuronal activation of amygdala and regulates social interaction and vocal communication in a mouse model. Behavioral defects caused by Tbr1 haploinsufficiency can be ameliorated by increasing neural activity via D-cycloserine treatment, an N-methyl-D-aspartate receptor (NMDAR) coagonist. In this report,weinvestigatetheroleofTBR1inregulatingolfaction and test whether D-cycloserine can also improve olfactory defects in Tbr1 mutant mice. Methods: We used Tbr1+/− mice as a model to investigate the function of TBR1 in olfactory sensation and discrimination of non-social odors. We employed a behavioral assay to characterize the olfactory defects of Tbr1+/− mice. Magnetic resonance imaging (MRI) and histological analysis were applied to characterize anatomical features. Immunostaining was performed to further analyze differences in expression of TBR1 subfamily members (namely TBR1, TBR2, and TBX21), interneuron populations, and dendritic abnormalities in olfactory bulbs. Finally, C-FOS staining was used to monitor neuronal activation of the olfactory system upon odor stimulation. Results: Tbr1+/− mice exhibited smaller olfactory bulbs and anterior commissures, reduced interneuron populations, and an abnormal dendritic morphology of mitral cells in the olfactory bulbs. -
Reduced Anterior Cingulate Cortex Volume Induced by Chronic Stress Correlates with Increased Behavioral Emotionality and Decreased Synaptic Puncta Density
bioRxiv preprint doi: https://doi.org/10.1101/2020.08.31.275750; this version posted September 1, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Reduced anterior cingulate cortex volume induced by chronic stress correlates with increased behavioral emotionality and decreased synaptic puncta density Keith A. Misquitta1,2, Amy Miles1, Thomas D. Prevot1,4, Jaime K. Knoch1,2, Corey Fee1,2, Dwight F. Newton1,2, Jacob Ellegood3, Jason P. Lerch3,5,6, Etienne Sibille1,2,4, Yuliya S. Nikolova1,4, Mounira Banasr1,2,4* 1Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health (CAMH), Toronto, Canada. 2Departments of Pharmacology and Toxicology, University of Toronto, Toronto, Canada. 3Mouse Imaging Centre (MICe), Hospital for Sick Children, Toronto, Canada. 4Department of Psychiatry, University of Toronto, Toronto, Canada 5Wellcome Centre for Integrative Neuroimaging, FMRIB, Nuffield Department of Clinical Neuroscience, The University of Oxford, Oxford, UK 6Department of Medical Biophyics, The University of Toronto, Toronto, Canada Contributions: Chronic restraint stress and Behavioral testing (KAM, TDP, CF), MRI and analysis (KAM, JKK, JE, JPL, DFN), Structural covariance analysis (AM,YN), Immunohistochemistry (KAM), study design, interpretation of the results and writing of the manuscript (KAM, ES, MB). Figures: 5 Figures Tables: None Supplementary Materials: 1 File *Corresponding author: Mounira Banasr, PhD, CAMH, 250 College Street, Toronto, ON, M5T1R8, Canada, Tel: 416-557-8302 Email: [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.08.31.275750; this version posted September 1, 2020. -
Adult Mouse Cortical Cell Taxonomy Revealed by Single-Cell Transcriptomics Bosiljka Tasic, Phd
Adult Mouse Cortical Cell Taxonomy Revealed by Single-Cell Transcriptomics Bosiljka Tasic, PhD Allen Institute for Brain Science Seattle, Washington © 2016 Tasic Adult Mouse Cortical Cell Taxonomy Revealed by Single-Cell Transcriptomics 55 Introduction which Cre, Dre, or Flp recombinases are expressed in NOTES In the mammalian brain, the neocortex is essential specific subsets of cortical cells (Tasic et al., 2016). To for sensory, motor, and cognitive behaviors. isolate individual cells for transcriptional profiling, Although different cortical areas have dedicated we sectioned fresh brains from adult transgenic roles in information processing, they exhibit a similar male mice; microdissected the full cortical depth, layered structure, with each layer harboring distinct combinations of sequential layers, or individual neuronal populations (Harris and Shepherd, 2015). layers (L1, 2/3, 4, 5, and 6) of VISp; and generated In the adult cortex, many types of neurons have single-cell suspensions using a previously published been identified by characterizing their molecular, procedure (Sugino et al., 2006; Hempel et al., 2007) morphological, connectional, physiological, and with some modifications (Fig. 1a) (Tasic et al., functional properties (Sugino et al., 2006; Rudy et 2016). We developed a robust procedure for isolating al., 2011; DeFelipe et al., 2013; Greig et al., 2013; individual adult live cells from the suspension by Sorensen et al., 2013). Despite much effort, however, fluorescence-activated cell sorting (FACS); reverse- objective classification on the basis of quantitative transcribed and amplified full-length poly(A)-RNA features has been challenging, and our understanding using the SMARTer protocol (SMARTer Ultra of the extent of cell-type diversity remains incomplete Low RNA Kit for Illumina Sequencing, Clontech, (Toledo-Rodriguez et al., 2004; DeFelipe et al., 2013; Mountain View, CA); converted the cDNA into Greig et al., 2013). -
A TBR1-K228E Mutation Induces Tbr1 Upregulation, Altered Cortical
ORIGINAL RESEARCH published: 09 October 2019 doi: 10.3389/fnmol.2019.00241 A TBR1-K228E Mutation Induces Tbr1 Upregulation, Altered Cortical Distribution of Interneurons, Increased Inhibitory Synaptic Transmission, and Autistic-Like Behavioral Deficits in Mice Chaehyun Yook 1, Kyungdeok Kim 1, Doyoun Kim 2, Hyojin Kang 3, Sun-Gyun Kim 2, Eunjoon Kim 1,2* and Soo Young Kim 4* 1Department of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, South Korea, 2Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, South Korea, 3Division of National 4 Edited by: Supercomputing, Korea Institute of Science and Technology Information (KISTI), Daejeon, South Korea, College of Se-Young Choi, Pharmacy, Yeongnam University, Gyeongsan, South Korea Seoul National University, South Korea Mutations in Tbr1, a high-confidence ASD (autism spectrum disorder)-risk gene Reviewed by: encoding the transcriptional regulator TBR1, have been shown to induce diverse Carlo Sala, Institute of Neuroscience (CNR), Italy ASD-related molecular, synaptic, neuronal, and behavioral dysfunctions in mice. Lin Mei, However, whether Tbr1 mutations derived from autistic individuals cause similar Department of Neuroscience, School of Medicine, Case Western Reserve dysfunctions in mice remains unclear. Here we generated and characterized mice University, United States carrying the TBR1-K228E de novo mutation identified in human ASD and identified *Correspondence: various ASD-related phenotypes. In heterozygous mice carrying this mutation Eunjoon Kim =K228E (Tbr1C mice), levels of the TBR1-K228E protein, which is unable to bind target [email protected] =K228E Soo Young Kim DNA, were strongly increased. RNA-Seq analysis of the Tbr1C embryonic brain [email protected] indicated significant changes in the expression of genes associated with neurons, =K228E astrocytes, ribosomes, neuronal synapses, and ASD risk. -
The Input-Output Relationship of the Cholinergic Basal Forebrain
Resource The Input-Output Relationship of the Cholinergic Basal Forebrain Graphical Abstract Authors Matthew R. Gielow, Laszlo Zaborszky Correspondence [email protected] In Brief Monosynaptic viral tracing in transgenic rats reveals that patterns of input cells contacting cholinergic neurons are biased according to their cortical or amygdalar output. Mapping inputs across the entire brain, Gielow and Zaborszky provide structural evidence for networks enabling differential acetylcholine release. Highlights d Inputs to cholinergic cells are biased, varying by cortical output target d Proportions of input to a given cortical cholinergic output are reproducible d The most prominent input to many cholinergic cells is the caudate putamen d Medial prefrontal cortex-projecting cholinergic cells receive little caudate input Gielow & Zaborszky, 2017, Cell Reports 18, 1817–1830 February 14, 2017 ª 2017 The Author(s). http://dx.doi.org/10.1016/j.celrep.2017.01.060 Cell Reports Resource The Input-Output Relationship of the Cholinergic Basal Forebrain Matthew R. Gielow1 and Laszlo Zaborszky1,2,* 1Center for Molecular and Behavioral Neuroscience, Rutgers, the State University of New Jersey, Newark, NJ 07102, USA 2Lead Contact *Correspondence: [email protected] http://dx.doi.org/10.1016/j.celrep.2017.01.060 SUMMARY Lesions of the BF in experimental animals or humans cause enhancement of slow oscillations and severe attention and mem- Basal forebrain cholinergic neurons influence cortical ory deficits (Botly and De Rosa, 2012; Buzsa´ ki et al., 1988; Lut- state, plasticity, learning, and attention. They collec- kenhoff et al., 2015), while BF stimulation increases the sponta- tively innervate the entire cerebral cortex, differen- neous and visually driven cortical firing rates, improving neuronal tially controlling acetylcholine efflux across different response reliability (Pinto et al., 2013). -
Automatic Navigation System for the Mouse Brain
bioRxiv preprint doi: https://doi.org/10.1101/442558; this version posted October 13, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-ND 4.0 International license. Tappan et al. Automatic navigation system for the mouse brain Automatic navigation system for the mouse brain Susan J. Tappan1*, Brian S. Eastwood1*, Nathan O’Connor1*, Quanxin Wang2, Lydia Ng2, David Feng2, Bryan M. Hooks3, Charles R. Gerfen4, Patrick R. Hof5, Christoph Schmitz6, Jack R. Glaser1 1 MBF Bioscience, Williston, VT, USA 2 Allen Institute for Brain Science, Seattle, WA, USA 3 University of Pittsburgh School of Medicine, Pittsburgh, PA, USA 4 Laboratory of Systems Neuroscience, National Institute of Mental Health, Bethesda, MD, USA 5 Fishberg Department of Neuroscience and Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA 6 Chair of Neuroanatomy, Institute of Anatomy, Faculty of Medicine, Ludwig-Maximilian University Munich, Munich, Germany * These authors contributed equally to this work Identification and delineation of brain regions in histologic mouse brain sections is especially pivotal for many neurogenomics, transcriptomics, proteomics and connectomics studies, yet this process is prone to observer error and bias. Here we present a novel brain navigation system, named NeuroInfo, whose general principle is similar to that of a global positioning system (GPS) in a car. NeuroInfo automatically navigates an investigator through the complex microscopic anatomy of histologic sections of mouse brains (thereafter: “experimental mouse brain sections”).