ASGR1 and Its Enigmatic Relative, CLEC10A
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Human and Mouse CD Marker Handbook Human and Mouse CD Marker Key Markers - Human Key Markers - Mouse
Welcome to More Choice CD Marker Handbook For more information, please visit: Human bdbiosciences.com/eu/go/humancdmarkers Mouse bdbiosciences.com/eu/go/mousecdmarkers Human and Mouse CD Marker Handbook Human and Mouse CD Marker Key Markers - Human Key Markers - Mouse CD3 CD3 CD (cluster of differentiation) molecules are cell surface markers T Cell CD4 CD4 useful for the identification and characterization of leukocytes. The CD CD8 CD8 nomenclature was developed and is maintained through the HLDA (Human Leukocyte Differentiation Antigens) workshop started in 1982. CD45R/B220 CD19 CD19 The goal is to provide standardization of monoclonal antibodies to B Cell CD20 CD22 (B cell activation marker) human antigens across laboratories. To characterize or “workshop” the antibodies, multiple laboratories carry out blind analyses of antibodies. These results independently validate antibody specificity. CD11c CD11c Dendritic Cell CD123 CD123 While the CD nomenclature has been developed for use with human antigens, it is applied to corresponding mouse antigens as well as antigens from other species. However, the mouse and other species NK Cell CD56 CD335 (NKp46) antibodies are not tested by HLDA. Human CD markers were reviewed by the HLDA. New CD markers Stem Cell/ CD34 CD34 were established at the HLDA9 meeting held in Barcelona in 2010. For Precursor hematopoetic stem cell only hematopoetic stem cell only additional information and CD markers please visit www.hcdm.org. Macrophage/ CD14 CD11b/ Mac-1 Monocyte CD33 Ly-71 (F4/80) CD66b Granulocyte CD66b Gr-1/Ly6G Ly6C CD41 CD41 CD61 (Integrin b3) CD61 Platelet CD9 CD62 CD62P (activated platelets) CD235a CD235a Erythrocyte Ter-119 CD146 MECA-32 CD106 CD146 Endothelial Cell CD31 CD62E (activated endothelial cells) Epithelial Cell CD236 CD326 (EPCAM1) For Research Use Only. -
Single Cell Transcriptome Atlas of Immune Cells in Human Small
bioRxiv preprint doi: https://doi.org/10.1101/721258; this version posted August 1, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Single cell transcriptome atlas of immune cells in human small 2 intestine and in celiac disease 3 4 Nader Atlasy1,a,4, Anna Bujko2,4, Peter B Brazda1,a, Eva Janssen-Megens1,a , Espen S. 5 Bækkevold2, Jørgen Jahnsen3, Frode L. Jahnsen2, Hendrik G. Stunnenberg1,a,* 6 7 8 1Department of Molecular Biology, Science Faculty, Radboud University, Nijmegen, The 9 Netherlands. 10 2 Department of Pathology, University of Oslo and Oslo University Hospital, Rikshospitalet, 11 Oslo, Norway 12 3 Department of Gastroenterology, Akershus University Hospital and University of Oslo, 13 Oslo, Norway. 14 15 acurrent address: Princess Maxima Centre for Pediatric Oncology, Heidelberglaan 25, 3584 16 CS Utrecht 17 18 19 4These authors contributed equally to this study 20 21 22 *Corresponding author: [email protected] 23 24 25 26 Celiac disease (CeD) is an autoimmune disorder in which ingestion of dietary gluten 27 triggers an immune reaction in the small intestine1,2. The CeD lesion is characterized by 28 crypt hyperplasia, villous atrophy and chronic inflammation with accumulation of 29 leukocytes both in the lamina propria (LP) and in the epithelium3, which eventually 30 leads to destruction of the intestinal epithelium1 and subsequent digestive complications 31 and higher risk of non-hodgkin lymphoma4. A lifetime gluten-free diet is currently the 32 only available treatment5. Gluten-specific LP CD4 T cells and cytotoxic intraepithelial 33 CD8+ T cells are thought to be central in disease pathology1,6-8, however, CeD is a 34 complex immune-mediated disorder and to date the findings are mostly based on 35 analysis of heterogeneous cell populations and on animal models. -
Human Anogenital Monocyte-Derived Dendritic Cells and Langerin+Cdc2 Are Major HIV Target Cells
ARTICLE https://doi.org/10.1038/s41467-021-22375-x OPEN Human anogenital monocyte-derived dendritic cells and langerin+cDC2 are major HIV target cells Jake W. Rhodes 1,2,15, Rachel A. Botting 1,2,3,15, Kirstie M. Bertram1,2, Erica E. Vine 1,2, Hafsa Rana1,2, Heeva Baharlou1,2, Peter Vegh 3, Thomas R. O’Neil1,2, Anneliese S. Ashhurst4, James Fletcher3, Grant P. Parnell1,2, J. Dinny Graham1,2, Najla Nasr1,4, Jake J. K. Lim5, Laith Barnouti6, Peter Haertsch7, Martijn P. Gosselink 1,8, Angelina Di Re 1,8, Faizur Reza1,8, Grahame Ctercteko1,8, Gregory J. Jenkins9, Andrew J. Brooks10, Ellis Patrick 1,11, Scott N. Byrne1,4, Eric Hunter 12, Muzlifah A. Haniffa 3,13,14, ✉ Anthony L. Cunningham 1,2,16 & Andrew N. Harman 1,4,16 1234567890():,; Tissue mononuclear phagocytes (MNP) are specialised in pathogen detection and antigen presentation. As such they deliver HIV to its primary target cells; CD4 T cells. Most MNP HIV transmission studies have focused on epithelial MNPs. However, as mucosal trauma and inflammation are now known to be strongly associated with HIV transmission, here we examine the role of sub-epithelial MNPs which are present in a diverse array of subsets. We show that HIV can penetrate the epithelial surface to interact with sub-epithelial resident MNPs in anogenital explants and define the full array of subsets that are present in the human anogenital and colorectal tissues that HIV may encounter during sexual transmission. In doing so we identify two subsets that preferentially take up HIV, become infected and transmit the virus to CD4 T cells; CD14+CD1c+ monocyte-derived dendritic cells and langerin-expressing conventional dendritic cells 2 (cDC2). -
Macrophage Activation Markers, CD163 and CD206, in Acute-On-Chronic Liver Failure
cells Review Macrophage Activation Markers, CD163 and CD206, in Acute-on-Chronic Liver Failure Marlene Christina Nielsen 1 , Rasmus Hvidbjerg Gantzel 2 , Joan Clària 3,4 , Jonel Trebicka 3,5 , Holger Jon Møller 1 and Henning Grønbæk 2,* 1 Department of Clinical Biochemistry, Aarhus University Hospital, 8200 Aarhus N, Denmark; [email protected] (M.C.N.); [email protected] (H.J.M.) 2 Department of Hepatology & Gastroenterology, Aarhus University Hospital, 8200 Aarhus N, Denmark; [email protected] 3 European Foundation for the Study of Chronic Liver Failure (EF-CLIF), 08021 Barcelona, Spain; [email protected] (J.C.); [email protected] (J.T.) 4 Department of Biochemistry and Molecular Genetics, Hospital Clínic-IDIBAPS, 08036 Barcelona, Spain 5 Translational Hepatology, Department of Internal Medicine I, Goethe University Frankfurt, 60323 Frankfurt, Germany * Correspondence: [email protected]; Tel.: +45-21-67-92-81 Received: 1 April 2020; Accepted: 4 May 2020; Published: 9 May 2020 Abstract: Macrophages facilitate essential homeostatic functions e.g., endocytosis, phagocytosis, and signaling during inflammation, and express a variety of scavenger receptors including CD163 and CD206, which are upregulated in response to inflammation. In healthy individuals, soluble forms of CD163 and CD206 are constitutively shed from macrophages, however, during inflammation pathogen- and damage-associated stimuli induce this shedding. Activation of resident liver macrophages viz. Kupffer cells is part of the inflammatory cascade occurring in acute and chronic liver diseases. We here review the existing literature on sCD163 and sCD206 function and shedding, and potential as biomarkers in acute and chronic liver diseases with a particular focus on Acute-on-Chronic Liver Failure (ACLF). -
In Sickness and in Health: the Immunological Roles of the Lymphatic System
International Journal of Molecular Sciences Review In Sickness and in Health: The Immunological Roles of the Lymphatic System Louise A. Johnson MRC Human Immunology Unit, MRC Weatherall Institute of Molecular Medicine, University of Oxford, John Radcliffe Hospital, Headington, Oxford OX3 9DS, UK; [email protected] Abstract: The lymphatic system plays crucial roles in immunity far beyond those of simply providing conduits for leukocytes and antigens in lymph fluid. Endothelial cells within this vasculature are dis- tinct and highly specialized to perform roles based upon their location. Afferent lymphatic capillaries have unique intercellular junctions for efficient uptake of fluid and macromolecules, while expressing chemotactic and adhesion molecules that permit selective trafficking of specific immune cell subsets. Moreover, in response to events within peripheral tissue such as inflammation or infection, soluble factors from lymphatic endothelial cells exert “remote control” to modulate leukocyte migration across high endothelial venules from the blood to lymph nodes draining the tissue. These immune hubs are highly organized and perfectly arrayed to survey antigens from peripheral tissue while optimizing encounters between antigen-presenting cells and cognate lymphocytes. Furthermore, subsets of lymphatic endothelial cells exhibit differences in gene expression relating to specific func- tions and locality within the lymph node, facilitating both innate and acquired immune responses through antigen presentation, lymph node remodeling and regulation of leukocyte entry and exit. This review details the immune cell subsets in afferent and efferent lymph, and explores the mech- anisms by which endothelial cells of the lymphatic system regulate such trafficking, for immune surveillance and tolerance during steady-state conditions, and in response to infection, acute and Citation: Johnson, L.A. -
Dux4r, Znf384r and PAX5-P80R Mutated B-Cell Precursor Acute
Acute Lymphoblastic Leukemia SUPPLEMENTARY APPENDIX DUX4r , ZNF384r and PAX5 -P80R mutated B-cell precursor acute lymphoblastic leukemia frequently undergo monocytic switch Michaela Novakova, 1,2,3* Marketa Zaliova, 1,2,3* Karel Fiser, 1,2* Barbora Vakrmanova, 1,2 Lucie Slamova, 1,2,3 Alena Musilova, 1,2 Monika Brüggemann, 4 Matthias Ritgen, 4 Eva Fronkova, 1,2,3 Tomas Kalina, 1,2,3 Jan Stary, 2,3 Lucie Winkowska, 1,2 Peter Svec, 5 Alexandra Kolenova, 5 Jan Stuchly, 1,2 Jan Zuna, 1,2,3 Jan Trka, 1,2,3 Ondrej Hrusak 1,2,3# and Ester Mejstrikova 1,2,3# 1CLIP - Childhood Leukemia Investigation Praguerague, Czech Republic; 2Department of Paediatric Hematology and Oncology, Second Faculty of Medicine, Charles University, Prague, Czech Republic; 3University Hospital Motol, Prague, Czech Republic; 4Department of In - ternal Medicine II, University Hospital Schleswig-Holstein, Kiel, Germany and 5Comenius University, National Institute of Children’s Dis - eases, Bratislava, Slovakia *MN, MZ and KF contributed equally as co-first authors. #OH and EM contributed equally as co-senior authors. ©2021 Ferrata Storti Foundation. This is an open-access paper. doi:10.3324/haematol. 2020.250423 Received: February 18, 2020. Accepted: June 25, 2020. Pre-published: July 9, 2020. Correspondence: ESTER MEJSTRIKOVA - [email protected] Table S1. S1a. List of antibodies used for diagnostic immunophenotyping. Antibody Fluorochrome Clone Catalogue number Manufacturer CD2 PE 39C1.5 A07744 Beckman Coulter CD3 FITC UCHT1 1F-202-T100 Exbio CD4 PE-Cy7 -
Single-Cell RNA Sequencing Demonstrates the Molecular and Cellular Reprogramming of Metastatic Lung Adenocarcinoma
ARTICLE https://doi.org/10.1038/s41467-020-16164-1 OPEN Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma Nayoung Kim 1,2,3,13, Hong Kwan Kim4,13, Kyungjong Lee 5,13, Yourae Hong 1,6, Jong Ho Cho4, Jung Won Choi7, Jung-Il Lee7, Yeon-Lim Suh8,BoMiKu9, Hye Hyeon Eum 1,2,3, Soyean Choi 1, Yoon-La Choi6,10,11, Je-Gun Joung1, Woong-Yang Park 1,2,6, Hyun Ae Jung12, Jong-Mu Sun12, Se-Hoon Lee12, ✉ ✉ Jin Seok Ahn12, Keunchil Park12, Myung-Ju Ahn 12 & Hae-Ock Lee 1,2,3,6 1234567890():,; Advanced metastatic cancer poses utmost clinical challenges and may present molecular and cellular features distinct from an early-stage cancer. Herein, we present single-cell tran- scriptome profiling of metastatic lung adenocarcinoma, the most prevalent histological lung cancer type diagnosed at stage IV in over 40% of all cases. From 208,506 cells populating the normal tissues or early to metastatic stage cancer in 44 patients, we identify a cancer cell subtype deviating from the normal differentiation trajectory and dominating the metastatic stage. In all stages, the stromal and immune cell dynamics reveal ontological and functional changes that create a pro-tumoral and immunosuppressive microenvironment. Normal resident myeloid cell populations are gradually replaced with monocyte-derived macrophages and dendritic cells, along with T-cell exhaustion. This extensive single-cell analysis enhances our understanding of molecular and cellular dynamics in metastatic lung cancer and reveals potential diagnostic and therapeutic targets in cancer-microenvironment interactions. 1 Samsung Genome Institute, Samsung Medical Center, Seoul 06351, Korea. -
Supplementary Table 1: Adhesion Genes Data Set
Supplementary Table 1: Adhesion genes data set PROBE Entrez Gene ID Celera Gene ID Gene_Symbol Gene_Name 160832 1 hCG201364.3 A1BG alpha-1-B glycoprotein 223658 1 hCG201364.3 A1BG alpha-1-B glycoprotein 212988 102 hCG40040.3 ADAM10 ADAM metallopeptidase domain 10 133411 4185 hCG28232.2 ADAM11 ADAM metallopeptidase domain 11 110695 8038 hCG40937.4 ADAM12 ADAM metallopeptidase domain 12 (meltrin alpha) 195222 8038 hCG40937.4 ADAM12 ADAM metallopeptidase domain 12 (meltrin alpha) 165344 8751 hCG20021.3 ADAM15 ADAM metallopeptidase domain 15 (metargidin) 189065 6868 null ADAM17 ADAM metallopeptidase domain 17 (tumor necrosis factor, alpha, converting enzyme) 108119 8728 hCG15398.4 ADAM19 ADAM metallopeptidase domain 19 (meltrin beta) 117763 8748 hCG20675.3 ADAM20 ADAM metallopeptidase domain 20 126448 8747 hCG1785634.2 ADAM21 ADAM metallopeptidase domain 21 208981 8747 hCG1785634.2|hCG2042897 ADAM21 ADAM metallopeptidase domain 21 180903 53616 hCG17212.4 ADAM22 ADAM metallopeptidase domain 22 177272 8745 hCG1811623.1 ADAM23 ADAM metallopeptidase domain 23 102384 10863 hCG1818505.1 ADAM28 ADAM metallopeptidase domain 28 119968 11086 hCG1786734.2 ADAM29 ADAM metallopeptidase domain 29 205542 11085 hCG1997196.1 ADAM30 ADAM metallopeptidase domain 30 148417 80332 hCG39255.4 ADAM33 ADAM metallopeptidase domain 33 140492 8756 hCG1789002.2 ADAM7 ADAM metallopeptidase domain 7 122603 101 hCG1816947.1 ADAM8 ADAM metallopeptidase domain 8 183965 8754 hCG1996391 ADAM9 ADAM metallopeptidase domain 9 (meltrin gamma) 129974 27299 hCG15447.3 ADAMDEC1 ADAM-like, -
Exploring Functional Pairing Between Surface Glycoconjugates And
Exploring functional pairing between surface PNAS PLUS glycoconjugates and human galectins using programmable glycodendrimersomes Qi Xiaoa, Anna-Kristin Ludwigb, Cecilia Romanòc, Irene Buzzaccheraa,d,e,f, Samuel E. Shermana, Maria Vetroc, Sabine Vértesyb, Herbert Kaltnerb, Ellen H. Reedg, Martin Möllerd,e, Christopher J. Wilsonf, Daniel A. Hammerg,h, Stefan Oscarsonc, Michael L. Kleini,1, Hans-Joachim Gabiusb, and Virgil Perceca,1 aRoy & Diana Vagelos Laboratories, Department of Chemistry, University of Pennsylvania, Philadelphia, PA 19104-6323; bInstitute of Physiological Chemistry, Faculty of Veterinary Medicine, Ludwig-Maximilians-University, 80539 Munich, Germany; cCentre for Synthesis and Chemical Biology, University College Dublin, Dublin 4, Ireland; dDWI − Leibniz Institute for Interactive Materials, RWTH Aachen University, 52074 Aachen, Germany; eInstitute of Technical and Macromolecular Chemistry, RWTH Aachen University, 52074 Aachen, Germany; fNovioSense B.V., 6534 AT Nijmegen, The Netherlands; gDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104-6321; hDepartment of Chemical and Biomolecular Engineering, University of Pennsylvania, Philadelphia, PA 19104-6391; and iInstitute of Computational Molecular Science, Temple University, Philadelphia, PA 19122 Contributed by Michael L. Klein, January 4, 2018 (sent for review November 16, 2017; reviewed by Timothy J. Deming and Yoshiko Miura) Precise translation of glycan-encoded information into cellular lection process are not yet defined quantitatively. Confronted with activity depends critically on highly specific functional pairing the combination of natural glycan complexity and the result of between glycans and their human lectin counter receptors. Sulfo- evolutionary structure diversification within a lectin family, the glycolipids, such as sulfatides, are important glycolipid components ultimate experimental strategy would seem to require full glycome of the biological membranes found in the nervous and immune and lectin network analysis. -
Differential Gene Expression in Oligodendrocyte Progenitor Cells, Oligodendrocytes and Type II Astrocytes
Tohoku J. Exp. Med., 2011,Differential 223, 161-176 Gene Expression in OPCs, Oligodendrocytes and Type II Astrocytes 161 Differential Gene Expression in Oligodendrocyte Progenitor Cells, Oligodendrocytes and Type II Astrocytes Jian-Guo Hu,1,2,* Yan-Xia Wang,3,* Jian-Sheng Zhou,2 Chang-Jie Chen,4 Feng-Chao Wang,1 Xing-Wu Li1 and He-Zuo Lü1,2 1Department of Clinical Laboratory Science, The First Affiliated Hospital of Bengbu Medical College, Bengbu, P.R. China 2Anhui Key Laboratory of Tissue Transplantation, Bengbu Medical College, Bengbu, P.R. China 3Department of Neurobiology, Shanghai Jiaotong University School of Medicine, Shanghai, P.R. China 4Department of Laboratory Medicine, Bengbu Medical College, Bengbu, P.R. China Oligodendrocyte precursor cells (OPCs) are bipotential progenitor cells that can differentiate into myelin-forming oligodendrocytes or functionally undetermined type II astrocytes. Transplantation of OPCs is an attractive therapy for demyelinating diseases. However, due to their bipotential differentiation potential, the majority of OPCs differentiate into astrocytes at transplanted sites. It is therefore important to understand the molecular mechanisms that regulate the transition from OPCs to oligodendrocytes or astrocytes. In this study, we isolated OPCs from the spinal cords of rat embryos (16 days old) and induced them to differentiate into oligodendrocytes or type II astrocytes in the absence or presence of 10% fetal bovine serum, respectively. RNAs were extracted from each cell population and hybridized to GeneChip with 28,700 rat genes. Using the criterion of fold change > 4 in the expression level, we identified 83 genes that were up-regulated and 89 genes that were down-regulated in oligodendrocytes, and 92 genes that were up-regulated and 86 that were down-regulated in type II astrocytes compared with OPCs. -
Adherence of Mycoplasma Gallisepticum to Human Erythrocytes M
INFECTION AND IMMUNITY, Aug. 1978, p. 365-372 Vol. 21, No. 2 0019-9567/78/0021-0365$02.00/0 Copyright i 1978 American Society for Microbiology Printed in U.S.A. Adherence of Mycoplasma gallisepticum to Human Erythrocytes M. BANAI,1 I. KAHANE,' S. RAZINl* AND W. BREDT2 Biomembrane Research Laboratory, Department of Clinical Microbiology, The Hebrew University- Hadassah Medical School, Jerusalem, Israel,' and Institute for General Hygiene and Bacteriology, Center for Hygiene, Albert-Ludwigs- Universitat, D- 7800 Freiburg, West Germany Received for publication 7 February 1978 Pathogenic mycoplasmas adhere to and colonize the epithelial lining of the respiratory and genital tracts ofinfected animals. An experimental system suitable for the quantitative study of mycoplasma adherence has been developed by us. The system consists of human erythrocytes (RBC) and the avian pathogen Mycoplasma gallisepticum, in which membrane lipids were labeled. The amount of mycoplasma cells attached to the RBC, which was determined according to radioactivity measurements, decreased on increasing the pH or ionic strength of the attachment mixture. Attachment followed first-order kinetics and depended on temperature. The mycoplasma cell population remaining in the supernatant fluid after exposure to RBC showed a much poorer ability to attach to RBC during a second attachment test, indicating an unequal distribution of binding sites among cells within a given population. The gradual removal of sialic acid residues from the RBC by neuraminidase was accompanied by a decrease in mycoplasma attachment. Isolated glycophorin, the RBC membrane glycoprotein carrying almost all the sialic acid moieties ofthe RBC, inhibited M. gallisepticum attachment, whereas asialoglycophorin and sialic acid itself were very poor inhibitors of attachment. -
The Effect of Bovine Galectin-1, a Conceptus Secretory Protein, on the Endometrial Transcriptome
Graduate Theses, Dissertations, and Problem Reports 2019 The Effect of Bovine Galectin-1, a Conceptus Secretory Protein, on the Endometrial Transcriptome Lindsay Faye Grose West Virginia University, [email protected] Follow this and additional works at: https://researchrepository.wvu.edu/etd Part of the Beef Science Commons, Dairy Science Commons, Genetics Commons, Large or Food Animal and Equine Medicine Commons, and the Other Physiology Commons Recommended Citation Grose, Lindsay Faye, "The Effect of Bovine Galectin-1, a Conceptus Secretory Protein, on the Endometrial Transcriptome" (2019). Graduate Theses, Dissertations, and Problem Reports. 4088. https://researchrepository.wvu.edu/etd/4088 This Thesis is protected by copyright and/or related rights. It has been brought to you by the The Research Repository @ WVU with permission from the rights-holder(s). You are free to use this Thesis in any way that is permitted by the copyright and related rights legislation that applies to your use. For other uses you must obtain permission from the rights-holder(s) directly, unless additional rights are indicated by a Creative Commons license in the record and/ or on the work itself. This Thesis has been accepted for inclusion in WVU Graduate Theses, Dissertations, and Problem Reports collection by an authorized administrator of The Research Repository @ WVU. For more information, please contact [email protected]. The Effect of Bovine Galectin-1, a Conceptus Secretory Protein, on the Endometrial Transcriptome Lindsay Faye Grose Thesis submitted to the Davis College of Agriculture, Natural Resources and Design at West Virginia University in partial fulfillment of the requirements for the degree of Master of Science in Reproductive Physiology Daniel J.