Prey Lysate Enhances Growth and Toxin Production in an Isolate of Dinophysis Acuminata
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Transcriptome Analysis Reveals Nuclear-Encoded Proteins for The
Wisecaver and Hackett BMC Genomics 2010, 11:366 http://www.biomedcentral.com/1471-2164/11/366 RESEARCH ARTICLE Open Access TranscriptomeResearch article analysis reveals nuclear-encoded proteins for the maintenance of temporary plastids in the dinoflagellate Dinophysis acuminata Jennifer H Wisecaver and Jeremiah D Hackett* Abstract Background: Dinophysis is exceptional among dinoflagellates, possessing plastids derived from cryptophyte algae. Although Dinophysis can be maintained in pure culture for several months, the genus is mixotrophic and needs to feed either to acquire plastids (a process known as kleptoplastidy) or obtain growth factors necessary for plastid maintenance. Dinophysis does not feed directly on cryptophyte algae, but rather on a ciliate (Myrionecta rubra) that has consumed the cryptophytes and retained their plastids. Despite the apparent absence of cryptophyte nuclear genes required for plastid function, Dinophysis can retain cryptophyte plastids for months without feeding. Results: To determine if this dinoflagellate has nuclear-encoded genes for plastid function, we sequenced cDNA from Dinophysis acuminata, its ciliate prey M. rubra, and the cryptophyte source of the plastid Geminigera cryophila. We identified five proteins complete with plastid-targeting peptides encoded in the nuclear genome of D. acuminata that function in photosystem stabilization and metabolite transport. Phylogenetic analyses show that the genes are derived from multiple algal sources indicating some were acquired through horizontal gene transfer. Conclusions: These findings suggest that D. acuminata has some functional control of its plastid, and may be able to extend the useful life of the plastid by replacing damaged transporters and protecting components of the photosystem from stress. However, the dearth of plastid-related genes compared to other fully phototrophic algae suggests that D. -
Dinoflagelados (Dinophyta) De Los Órdenes Prorocentrales Y Dinophysiales Del Sistema Arrecifal Veracruzano, México
Symbol.dfont in 8/10 pts abcdefghijklmopqrstuvwxyz ABCDEFGHIJKLMNOPQRSTUVWXYZ Symbol.dfont in 10/12 pts abcdefghijklmopqrstuvwxyz ABCDEFGHIJKLMNOPQRSTUVWXYZ Symbol.dfont in 12/14 pts abcdefghijklmopqrstuvwxyz ABCDEFGHIJKLMNOPQRSTUVWXYZ Dinoflagelados (Dinophyta) de los órdenes Prorocentrales y Dinophysiales del Sistema Arrecifal Veracruzano, México Dulce Parra-Toriz1,3, María de Lourdes Araceli Ramírez-Rodríguez1 & David Uriel Hernández-Becerril2 1. Facultad de Biología, Universidad Veracruzana, Circuito Gonzalo Beltrán s/n, Zona Universitaria, Xalapa, Veracruz, 91090 México; [email protected] 2. Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México (UNAM). Apartado Postal 70-305, México D.F. 04510 México; [email protected] 3. Posgrado en Ciencias del Mar. Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México (UNAM). Apartado Postal 70-305, México D.F. 04510 México; [email protected] Recibido 12-III-2010. Corregido 24-VIII-2010. Aceptado 23-IX-2010. Abstract: Dinoflagellates (Dinophyta) of orders Dinophysiales and Prorocentrales of the Veracruz Reef System, Mexico. Dinoflagellates are a major taxonomic group in marine phytoplankton communities in terms of diversity and biomass. Some species are also important because they form blooms and/or produce toxins that may cause diverse problems. The composition of planktonic dinoflagellates of the orders Prorocentrales and Dinophysiales, in the Veracruz Reef System, were obtained during the period of October 2006 to January 2007. For this, samples were taken from the surface at 10 stations with net of 30µm mesh, and were analyzed by light and scanning electron microscopy. Each species was described and illustrated, measured and their dis- tribution and ecological data is also given. A total of nine species were found and identified, belonging to four genera: Dinophysis was represented by three species; Prorocentrum by three, Phalacroma by two, and only one species of Ornithocercus was detected. -
Development of a Quantitative PCR Assay for the Detection And
bioRxiv preprint doi: https://doi.org/10.1101/544247; this version posted February 8, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Development of a quantitative PCR assay for the detection and enumeration of a potentially ciguatoxin-producing dinoflagellate, Gambierdiscus lapillus (Gonyaulacales, Dinophyceae). Key words:Ciguatera fish poisoning, Gambierdiscus lapillus, Quantitative PCR assay, Great Barrier Reef Kretzschmar, A.L.1,2, Verma, A.1, Kohli, G.S.1,3, Murray, S.A.1 1Climate Change Cluster (C3), University of Technology Sydney, Ultimo, 2007 NSW, Australia 2ithree institute (i3), University of Technology Sydney, Ultimo, 2007 NSW, Australia, [email protected] 3Alfred Wegener-Institut Helmholtz-Zentrum fr Polar- und Meeresforschung, Am Handelshafen 12, 27570, Bremerhaven, Germany Abstract Ciguatera fish poisoning is an illness contracted through the ingestion of seafood containing ciguatoxins. It is prevalent in tropical regions worldwide, including in Australia. Ciguatoxins are produced by some species of Gambierdiscus. Therefore, screening of Gambierdiscus species identification through quantitative PCR (qPCR), along with the determination of species toxicity, can be useful in monitoring potential ciguatera risk in these regions. In Australia, the identity, distribution and abundance of ciguatoxin producing Gambierdiscus spp. is largely unknown. In this study we developed a rapid qPCR assay to quantify the presence and abundance of Gambierdiscus lapillus, a likely ciguatoxic species. We assessed the specificity and efficiency of the qPCR assay. The assay was tested on 25 environmental samples from the Heron Island reef in the southern Great Barrier Reef, a ciguatera endemic region, in triplicate to determine the presence and patchiness of these species across samples from Chnoospora sp., Padina sp. -
Dinophysis - a Planktonic Dinoflagellate Genus Which Can Act Both As a Prey and a Predator of a Ciliate
MARINE ECOLOGY PROGRESS SERIES Vol. 69: 201-204.1991 Published January 10 Mar. Ecol. Prog. Ser. NOTE Dinophysis - a planktonic dinoflagellate genus which can act both as a prey and a predator of a ciliate Per Juel Hansen Marine Biological Laboratory. University of Copenhagen. Strandpromenaden 5, DK-3000 Helsinger, Denmark ABSTRACT: Heterotrophic members of the marine plankton (Nunclon, Denmark) at low light (50 pE m-2 S-') on a dinoflagellate genus Dinophysis are specialized predators, rotating wheel at 18 + 1 "C. The feeding behaviour of whose food includes the prostomatid ciliate Tiarina fusus. This heterotrophic (colourless) Dinophysis and the nature of ciliate differs from most planktonic ciliates in its ability to ingest prey of its own size including autotrophic Dinophysis food items were studied microscopically. For enumera- spp. However, when trying to catch a heterotrophic Dinophy- tion of plankton, Lugol-fixed water samples (at least sis sp., the ciliate is trapped instead by the dinoflagellate and 50 ml) were allowed to settle, and counted using an emptied via a feeding tube (peduncle),which originates from inverted microscope. For transmission electron micros- the flagellar pore of the dinoflagellate. The specific predation on a ciliate by a heterotrophic dinoflagellate represents a new copy, cells were fixed in a 0.1 M phosphate buffer (pH trophic link in the marine planktonic food web. 7.5) with l % Os04, 3 % glutaraldehyde and l mM sucrose. The fixed cells were stained in a saturated The existence of colourl.ess thecate dinoflagellates in solution of uranyl acetate in 70 % ethanol for 1 h, the marine pelagial has been recognized among taxo- dehydrated and imbedded in Epon. -
Development of Molecular Probes for Dinophysis (Dinophyceae) Plastid: a Tool to Predict Blooming and Explore Plastid Origin
Development of Molecular Probes for Dinophysis (Dinophyceae) Plastid: A Tool to Predict Blooming and Explore Plastid Origin Yoshiaki Takahashi,1 Kiyotaka Takishita,2 Kazuhiko Koike,1 Tadashi Maruyama,2 Takeshi Nakayama,3 Atsushi Kobiyama,1 Takehiko Ogata1 1School of Fisheries Sciences, Kitasato University, Sanriku, Ofunato, Iwate, 022-01011, Japan 2Marine Biotechnology Institute, Heita Kamaishi, Iwate, 026-0001, Japan 3Institute of Biological Sciences, University of Tsukuba, Tennoh-dai, Tsukuba, Ibaraki, 305-8577, Japan Received: 9 July 2004 / Accepted: 19 August 2004 / Online publication: 24 March 2005 Abstract Introduction Dinophysis are species of dinoflagellates that cause Some phytoplankton species are known to produce diarrhetic shellfish poisoning. We have previously toxins that accumulate in plankton feeders. In par- reported that they probably acquire plastids from ticular, toxin accumulation in bivalves causes food cryptophytes in the environment, after which they poisoning in humans, and often leads to severe eco- bloom. Thus monitoring the intracellular plastid nomic damage to the shellfish industry. density in Dinophysis and the source cryptophytes Diarrhetic shellfish poisoning (DSP) is a gastro- occurring in the field should allow prediction of intestinal syndrome caused by phytoplankton tox- Dinophysis blooming. In this study the nucleotide ins, including okadaic acid, and several analogues of sequences of the plastid-encoded small subunit dinophysistoxin (Yasumoto et al., 1985). These tox- ribosomal RNA gene and rbcL (encoding the large ins are derived from several species of dinoflagellates subunit of RuBisCO) from Dinophysis spp. were belonging to the genus Dinophysis (Yasumoto et al, compared with those of cryptophytes, and genetic 1980; Lee et al., 1989). Despite extensive studies in probes specific for the Dinophysis plastid were de- the last 2 decades, little is known about the eco- signed. -
The Symbiotic Life of Symbiodinium in the Open Ocean Within a New Species of Calcifying Ciliate (Tiarina Sp.)
The ISME Journal (2016) 10, 1424–1436 © 2016 International Society for Microbial Ecology All rights reserved 1751-7362/16 www.nature.com/ismej ORIGINAL ARTICLE The symbiotic life of Symbiodinium in the open ocean within a new species of calcifying ciliate (Tiarina sp.) Solenn Mordret1,2,5, Sarah Romac1,2, Nicolas Henry1,2, Sébastien Colin1,2, Margaux Carmichael1,2, Cédric Berney1,2, Stéphane Audic1,2, Daniel J Richter1,2, Xavier Pochon3,4, Colomban de Vargas1,2 and Johan Decelle1,2,6 1EPEP—Evolution des Protistes et des Ecosystèmes Pélagiques—team, Sorbonne Universités, UPMC Univ Paris 06, UMR 7144, Station Biologique de Roscoff, Roscoff, France; 2CNRS, UMR 7144, Station Biologique de Roscoff, Roscoff, France; 3Coastal and Freshwater Group, Cawthron Institute, Nelson, New Zealand and 4Institute of Marine Science, University of Auckland, Auckland, New Zealand Symbiotic partnerships between heterotrophic hosts and intracellular microalgae are common in tropical and subtropical oligotrophic waters of benthic and pelagic marine habitats. The iconic example is the photosynthetic dinoflagellate genus Symbiodinium that establishes mutualistic symbioses with a wide diversity of benthic hosts, sustaining highly biodiverse reef ecosystems worldwide. Paradoxically, although various species of photosynthetic dinoflagellates are prevalent eukaryotic symbionts in pelagic waters, Symbiodinium has not yet been reported in symbiosis within oceanic plankton, despite its high propensity for the symbiotic lifestyle. Here we report a new pelagic photosymbiosis between a calcifying ciliate host and the microalga Symbiodinium in surface ocean waters. Confocal and scanning electron microscopy, together with an 18S rDNA-based phylogeny, showed that the host is a new ciliate species closely related to Tiarina fusus (Colepidae). -
Metabolomic Profiles of Dinophysis Acuminata and Dinophysis Acuta
Metabolomic Profiles of Dinophysis acuminata and Dinophysis acuta Using Non- Targeted High-Resolution Mass Spectrometry Effect of Nutritional Status and Prey García-Portela, María; Reguera, Beatriz; Sibat, Manoella; Altenburger, Andreas; Rodríguez, Francisco; Hess, Philipp Published in: Marine Drugs DOI: 10.3390/md16050143 Publication date: 2018 Document version Publisher's PDF, also known as Version of record Document license: CC BY Citation for published version (APA): García-Portela, M., Reguera, B., Sibat, M., Altenburger, A., Rodríguez, F., & Hess, P. (2018). Metabolomic Profiles of Dinophysis acuminata and Dinophysis acuta Using Non-Targeted High-Resolution Mass Spectrometry: Effect of Nutritional Status and Prey. Marine Drugs, 16(5), [143]. https://doi.org/10.3390/md16050143 Download date: 24. Sep. 2021 marine drugs Article Metabolomic Profiles of Dinophysis acuminata and Dinophysis acuta Using Non-Targeted High-Resolution Mass Spectrometry: Effect of Nutritional Status and Prey María García-Portela 1,* ID , Beatriz Reguera 1 ID , Manoella Sibat 2 ID , Andreas Altenburger 3 ID , Francisco Rodríguez 1 and Philipp Hess 2 ID 1 IEO, Oceanographic Centre of Vigo, Subida a Radio Faro 50, Vigo 36390, Spain; [email protected] (B.R.); [email protected] (F.R.) 2 IFREMER, Phycotoxins Laboratory, rue de l’Ile d’Yeu, BP 21105, F-44311 Nantes, France; [email protected] (M.S.); [email protected] (P.H.) 3 Natural History Museum of Denmark, University of Copenhagen, Øster Voldgade 5-7, 1350 Copenhagen, Denmark; [email protected] * Correspondence: [email protected]; Tel.: +34-986-462-273 Received: 14 February 2018; Accepted: 20 April 2018; Published: 26 April 2018 Abstract: Photosynthetic species of the genus Dinophysis are obligate mixotrophs with temporary plastids (kleptoplastids) that are acquired from the ciliate Mesodinium rubrum, which feeds on cryptophytes of the Teleaulax-Plagioselmis-Geminigera clade. -
Potentially Toxic Dinoflagellates in Mediterranean Waters (Sicily) and Related Hydrobiological Conditions
AQUATIC MICROBIAL ECOLOGY I Vol. 9: 63-68, 1995 Published April 28 Aquat microb Ecol I I Potentially toxic dinoflagellates in Mediterranean waters (Sicily) and related hydrobiological conditions 'Istituto Sperimentale Talassografico, CNR - Sp. San Raineri, 1-98122 Messina, Italy 'CEOM - Centro Oceanologico Mediterraneo, Palermo, Italy ABSTRACT: The seasonal occurrence of 3 potentially toxic dinoflagellates in different coastal environ- ments of Sicily (Mediterranean Sea) and the associated hydrobiological conditions are reported. Dino- physis sacculus and Alexandrium sp. occurred, in 1993, in shallow inland waters (a brackish lagoon of the Tyrrhenian Sea), characterized by thermo-haline homogeneity. The densities of Dinophysis were maximal in Apnl, when the waters were depleted in nutrients, the N:P ratio was 10:1 and the algal pop- ulation, including synechoccoid cyanobacteria, bloomed. Afterwards, the cell concentrations decreased and in summer there was a total replacement of Dinophysis with Alexandrium. In late summer 1993, Gymnodinium catenatum was also recorded in offshore waters of the Malta Channel, during coastal upwelling associated with thermal stratification of the waters and the cells dispersed shorewards. DSP toxicity of blue mussels was detected in April, at a low level only, in the area affected by D. sacculus. No data is, however, available to date on PSP production by Alexandrium and G. catenatum, which are new records for these areas. KEY WORDS: Dinoflagellates . Hydrobiological factors . Mediterranean Sea . Shellfish contamination INTRODUCTION tised, as well as in other areas of the Tyrrhenian coast- line, where artificial reefs and pilot plants for shellfish In recent years, various species of both naked and farming are located (Giacobbe et al. -
Waterborne Pathogens in Agricultural Watersheds
United States Department of Waterborne Pathogens in Agriculture Natural Resources Agricultural Watersheds Conservation Service Watershed Science by Barry H. Rosen Institute NRCS, Watershed Science Institute School of Natural Resources University of Vermont, Burlington Contents Introduction ..................................................... 1 Pathogens of concern ..................................... 3 Pathogens in the environment .....................22 Control methods............................................ 33 Monitoring and evaluation ........................... 43 Anticipated developments ........................... 47 Summary ........................................................ 48 Glossary .......................................................... 49 References...................................................... 52 With contributions by Richard Croft, Natural Resources Conservation Service (retired) Edward R. Atwill, D.V.M., Ph.D., School of Veterinary Medicine, University of California-Davis, 18830 Road 112, Tulare, California Susan Stehman, V.M.D., Senior Extension Veterinarian, New York State Diagnostic Laboratory, College of Veterinary Medicine, Cornell University, Ithaca, New York Susan Wade, Ph.D., Director Parasitology Laboratory, New York State Diagnostic Laboratory, College of Veterinary Medicine, Cornell University, Ithaca, New York Issued June 2000 The United States Department of Agriculture (USDA) prohibits discrimi- nation in all its programs and activities on the basis of race, color, na- tional origin, gender, -
Symbiodinium Genomes Reveal Adaptive Evolution of Functions Related to Coral-Dinoflagellate Symbiosis
Corrected: Publisher correction ARTICLE DOI: 10.1038/s42003-018-0098-3 OPEN Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis Huanle Liu1, Timothy G. Stephens1, Raúl A. González-Pech1, Victor H. Beltran2, Bruno Lapeyre3,4,12, Pim Bongaerts5,6, Ira Cooke4, Manuel Aranda7, David G. Bourne2,8, Sylvain Forêt3,9, David J. Miller3,4, Madeleine J.H. van Oppen2,10, Christian R. Voolstra7, Mark A. Ragan1 & Cheong Xin Chan1,11 1234567890():,; Symbiosis between dinoflagellates of the genus Symbiodinium and reef-building corals forms the trophic foundation of the world’s coral reef ecosystems. Here we present the first draft genome of Symbiodinium goreaui (Clade C, type C1: 1.03 Gbp), one of the most ubiquitous endosymbionts associated with corals, and an improved draft genome of Symbiodinium kawagutii (Clade F, strain CS-156: 1.05 Gbp) to further elucidate genomic signatures of this symbiosis. Comparative analysis of four available Symbiodinium genomes against other dinoflagellate genomes led to the identification of 2460 nuclear gene families (containing 5% of Symbiodinium genes) that show evidence of positive selection, including genes involved in photosynthesis, transmembrane ion transport, synthesis and modification of amino acids and glycoproteins, and stress response. Further, we identify extensive sets of genes for meiosis and response to light stress. These draft genomes provide a foundational resource for advancing our understanding of Symbiodinium biology and the coral-algal symbiosis. 1 Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia. 2 Australian Institute of Marine Science, Townsville, QLD 4810, Australia. 3 ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811, Australia. -
Co-Occurrence of Dinophysis Tripos and Pectenotoxins in Argentinean
Harmful Algae 42 (2015) 25–33 Contents lists available at ScienceDirect Harmful Algae jo urnal homepage: www.elsevier.com/locate/hal Co-occurrence of Dinophysis tripos and pectenotoxins in Argentinean shelf waters a,b a,b a,b b,c,d Elena Fabro , Gasto´ n O. Almandoz , Martha E. Ferrario , Mo´ nica S. Hoffmeyer , e d f, Rosa E. Pettigrosso , Roma´n Uibrig , Bernd Krock * a Divisio´n Ficologı´a, Facultad de Ciencias Naturales y Museo, Universidad Nacional de La Plata, Paseo del Bosque s/n, B1900FWA La Plata, Argentina b Consejo Nacional de Investigaciones Cientı´ficas y Te´cnicas (CONICET), Av. Rivadavia 1917, 1033 Buenos Aires, Argentina c Facultad Regional de Bahı´a Blanca, Universidad Tecnolo´gica Nacional, 11 de Abril 461, B8000LMI Bahı´a Blanca, Argentina d Instituto Argentino de Oceanografı´a (CCTBB CONICET), Camino La Carrindanga km 7.5, B8000FWB Bahı´a Blanca, Argentina e Departamento de Biologı´a, Bioquı´mica y Farmacia, Universidad Nacional del Sur, San Juan 670, 8000 Bahı´a Blanca, Argentina f Alfred Wegener Institut-Helmholtz Zentrum fu¨r Polar- und Meeresforschung, Chemische O¨kologie, Am Handelshafen 12, 27570 Bremerhaven, Germany A R T I C L E I N F O A B S T R A C T Article history: The species Dinophysis tripos is a widely distributed marine dinoflagellate associated with diarrheic Received 21 August 2014 shellfish poisoning (DSP) events, which has been recently identified as a pectenotoxin (PTX) producer. In Received in revised form 18 December 2014 two sampling expeditions carried out during austral autumns 2012 and 2013 along the Argentine Sea Accepted 18 December 2014 (38–568 S), lipophilic phycotoxins were measured by tandem mass spectrometry coupled to liquid Available online chromatography (LC–MS/MS) in size-fractionated plankton samples together with microscopic analyses of potentially toxic phytoplankton. -
Further Advance of Gambierdiscus Species in the Canary Islands, with the First Report of Gambierdiscus Belizeanus
toxins Article Further Advance of Gambierdiscus Species in the Canary Islands, with the First Report of Gambierdiscus belizeanus Àngels Tudó 1, Greta Gaiani 1, Maria Rey Varela 1 , Takeshi Tsumuraya 2 , Karl B. Andree 1, Margarita Fernández-Tejedor 1 ,Mònica Campàs 1 and Jorge Diogène 1,* 1 Institut de Recerca i Tecnologies Agroalimentàries (IRTA), Ctra. Poble Nou Km 5.5, Sant Carles de la Ràpita, 43540 Tarragona, Spain; [email protected] (À.T.); [email protected] (G.G.); [email protected] (M.R.V.); [email protected] (K.B.A.); [email protected] (M.F.-T.); [email protected] (M.C.) 2 Department of Biological Science, Graduate School of Science, Osaka Prefecture University, Osaka 599-8570, Japan; [email protected] * Correspondence: [email protected] Received: 22 September 2020; Accepted: 27 October 2020; Published: 31 October 2020 Abstract: Ciguatera Poisoning (CP) is a human food-borne poisoning that has been known since ancient times to be found mainly in tropical and subtropical areas, which occurs when fish or very rarely invertebrates contaminated with ciguatoxins (CTXs) are consumed. The genus of marine benthic dinoflagellates Gambierdiscus produces CTX precursors. The presence of Gambierdiscus species in a region is one indicator of CP risk. The Canary Islands (North Eastern Atlantic Ocean) is an area where CP cases have been reported since 2004. In the present study, samplings for Gambierdiscus cells were conducted in this area during 2016 and 2017. Gambierdiscus cells were isolated and identified as G. australes, G. excentricus, G. caribaeus, and G.