Humulus Scandens (Lour.) Merr
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Plant Genera Cannabis and Humulus Share the Same Pair of Well- Differentiated Sex Chromosomes
Research Plant genera Cannabis and Humulus share the same pair of well- differentiated sex chromosomes Djivan Prentout1 , Natasa Stajner2, Andreja Cerenak3, Theo Tricou1 , Celine Brochier-Armanet1, Jernej * * Jakse2 , Jos Kafer¨ 1 and Gabriel A. B. Marais1,4 1Laboratoire de Biometrie´ et Biologie Evolutive, UMR 5558, Universite´ de Lyon, Universite´ Lyon 1, CNRS, Villeurbanne F-69622, France; 2Department of Agronomy, Biotechnical Faculty, University of Ljubljana, Jamnikarjeva 101, Ljubljana SI-1000, Slovenia; 3Slovenian Institute of Hop Research and Brewing, Cesta Zalskega Tabora 2, Zalec SI-3310, Slovenia; 4LEAF- Linking Landscape, Environment, Agriculture and Food, Instituto Superior de Agronomia, Universidade de Lisboa, Lisboa 1349-017, Portugal Summary Author for correspondence: We recently described, in Cannabis sativa, the oldest sex chromosome system documented Djivan Prentout so far in plants (12–28 Myr old). Based on the estimated age, we predicted that it should be Email: [email protected] shared by its sister genus Humulus, which is known also to possess XY chromosomes. Here, we used transcriptome sequencing of an F1 family of H. lupulus to identify and study Received: 19 February 2021 the sex chromosomes in this species using the probabilistic method SEX-DETECTOR. Accepted: 29 April 2021 We identified 265 sex-linked genes in H. lupulus, which preferentially mapped to the C. sativa X chromosome. Using phylogenies of sex-linked genes, we showed that a region of the New Phytologist (2021) sex chromosomes had already stopped recombining in an ancestor of both species. Further- doi: 10.1111/nph.17456 more, as in C. sativa, Y-linked gene expression reduction is correlated to the position on the X chromosome, and highly Y degenerated genes showed dosage compensation. -
Genetically Modified Baculoviruses for Pest
INSECT CONTROL BIOLOGICAL AND SYNTHETIC AGENTS This page intentionally left blank INSECT CONTROL BIOLOGICAL AND SYNTHETIC AGENTS EDITED BY LAWRENCE I. GILBERT SARJEET S. GILL Amsterdam • Boston • Heidelberg • London • New York • Oxford Paris • San Diego • San Francisco • Singapore • Sydney • Tokyo Academic Press is an imprint of Elsevier Academic Press, 32 Jamestown Road, London, NW1 7BU, UK 30 Corporate Drive, Suite 400, Burlington, MA 01803, USA 525 B Street, Suite 1800, San Diego, CA 92101-4495, USA ª 2010 Elsevier B.V. All rights reserved The chapters first appeared in Comprehensive Molecular Insect Science, edited by Lawrence I. Gilbert, Kostas Iatrou, and Sarjeet S. Gill (Elsevier, B.V. 2005). All rights reserved. No part of this publication may be reproduced or transmitted in any form or by any means, electronic or mechanical, including photocopy, recording, or any information storage and retrieval system, without permission in writing from the publishers. Permissions may be sought directly from Elsevier’s Rights Department in Oxford, UK: phone (þ44) 1865 843830, fax (þ44) 1865 853333, e-mail [email protected]. Requests may also be completed on-line via the homepage (http://www.elsevier.com/locate/permissions). Library of Congress Cataloging-in-Publication Data Insect control : biological and synthetic agents / editors-in-chief: Lawrence I. Gilbert, Sarjeet S. Gill. – 1st ed. p. cm. Includes bibliographical references and index. ISBN 978-0-12-381449-4 (alk. paper) 1. Insect pests–Control. 2. Insecticides. I. Gilbert, Lawrence I. (Lawrence Irwin), 1929- II. Gill, Sarjeet S. SB931.I42 2010 632’.7–dc22 2010010547 A catalogue record for this book is available from the British Library ISBN 978-0-12-381449-4 Cover Images: (Top Left) Important pest insect targeted by neonicotinoid insecticides: Sweet-potato whitefly, Bemisia tabaci; (Top Right) Control (bottom) and tebufenozide intoxicated by ingestion (top) larvae of the white tussock moth, from Chapter 4; (Bottom) Mode of action of Cry1A toxins, from Addendum A7. -
A Review on Presence of Oleanolic Acid in Natural Products
Natura Proda Medica, (2), April 2009 64 A review on presence of Oleanolic acid in Natural Products A review on presence of Oleanolic acid in Natural Products YEUNG Ming Fai Abstract Oleanolic acid (OA), a common phytochemical, is chosen as an example for elucidation of its presence in natural products by searching scientific databases. 146 families, 698 genera and 1620 species of natural products were found to have OA up to Sep 2007. Keywords Oleanolic acid, natural products, plants, Chinese medicine, Linnaeus system of plant classification Introduction and/or its saponins in natural products was carried out for Oleanolic acid (OA), a common phytochemical, is chosen elucidating its pressence. The classification was based on as an example for elucidation of its presence in natural Linnaeus system of plant classification from the databases of products by searching scientific databases. SciFinder and China Yearbook Full-text Database (CJFD). Methodology of Review Result of Review Literature search for isolation and characterization of OA Search results were tabulated (Table 1). Table 1 Literature review of natural products containing OA and/or its saponins. The classification is based on Angiosperm Phylogeny Group APG II system of plant classification from the databases of SciFinder and China Yearbook Full-text Database (CJFD). Family of plants Plant scientific names Position of plant to be Form of OA References isolated isolated Acanthaceae Juss. Acanthus illicifolius L. Leaves OA [1-2] Acanthaceae Avicennia officinalis Linn. Leaves OA [3] Acanthaceae Blepharis sindica Stocks ex T. Anders Seeds OA [4] Acanthaceae Dicliptera chinensis (Linn.) Juss. Whole plant OA [5] Acanthaceae Justicia simplex Whole plant OA saponins [6] Actinidiaceae Gilg. -
On the Origin of Hops: Genetic Variability, Phylogenetic Relationships, and Ecological Plasticity of Humulus (Cannabaceae)
ON THE ORIGIN OF HOPS: GENETIC VARIABILITY, PHYLOGENETIC RELATIONSHIPS, AND ECOLOGICAL PLASTICITY OF HUMULUS (CANNABACEAE) A DISSERTATION SUBMITTED TO THE GRADUATE DIVISION OF THE UNIVERSITY OF HAWAI‘I AT MĀNOA IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY IN BOTANY MAY 2014 By Jeffrey R. Boutain DISSERTATION COMMITTEE: Will C. McClatchey, Chairperson Mark D. Merlin Sterling C. Keeley Clifford W. Morden Stacy Jørgensen Copyright © 2014 by Jeffrey R. Boutain ii This dissertation is dedicated to my family tree. iii ACKNOWLEDGEMENTS There are a number of individuals to whom I am indebted in many customs. First and foremost, I thank my committee members for their contribution, patience, persistence, and motivation that helped me complete this dissertation. Specifically, thank you Dr. Will McClatchey for the opportunity to study in a botany program with you as my advisor and especially the encouragement to surf plant genomes. Also with great gratitude, thank you Dr. Sterling Keeley for the opportunity to work on much of this dissertation in your molecular phylogenetics and systematics lab. In addition, thank you Dr. Mark Merlin for numerous brainstorming sessions as well as your guidance and expert perspective on the Cannabaceae. Also, thank you Dr. Cliff Morden for the opportunity to work in your lab where the beginnings of this molecular research took place. Thank you Dr. Jianchu Xu for welcoming me into your lab group at the Kunming Institute of Botany, Chinese Academy of Sciences (CAS) and the opportunity to study the Yunnan hop. In many ways, major contributions towards the completion of this dissertation have come from my family, and I thank you for your unconditional encouragement, love, and support. -
Syndrome ... and How Specialist Tansy Aphids Avoid Extinction by Hungry Predators and Parasitoids: Insights from the Use of Polymorphic Microsatellite Markers
Landscape Management for Functional Biodiversity IOBC wprs Bulletin Vol. 34, 2008 pp. 61-64 The 'Cake on the plate' syndrome ... and how specialist tansy aphids avoid extinction by hungry predators and parasitoids: insights from the use of polymorphic microsatellite markers Hugh D. Loxdale1,2, Franklin Nyabuga1,2, Wolfgang W. Weisser1 1 Institute of Ecology, Friedrich Schiller University, Dornburger Strasse 159, D–07743 Jena, Germany; 2 Department of Entomology, Max Planck Institute for Chemical Ecology, Hans-Knoell- Strasse 8, D-07745 Jena, Germany. E–mail:[email protected]; [email protected] Key words: aphids, primary hymenopterous parasitoids, population, ecology, movement, microsatellites, molecular markers It was initially shown from 12.2 m high suction trap aerial density data and later confirmed using polymorphic molecular markers (initially allozymes, later high resolution DNA markers, especially microsatellites), that different species of aphids (Hemiptera: Aphididae) have different migratory urges and abilities. Such population genetic differences are manifested in the different patterns obtained for different species: thus highly migratory species (e.g. the grain aphid, Sitobion avenae F.) display similar allele frequencies patterns over large geographical distances, apparently intermediate migrants (e.g. blackberry-grain aphid, S. fragariae (Walker) and damson-hop aphid, Phorodon humuli (Schrank)) show much more local heterogeneity, whilst relatively very ‘immobile’ species like specialist tansy aphids (i.e. Macrosiphoniella tanacetaria (Kaltenbach) and Metopeurum fuscoviride Stroyan), which have a metapopulation structure, show highly heterogeneous patterns, even at small spatial scales (see Loxdale & Lushai, 2007 for a review and Massonnet, 2002). If it is indeed true that different aphid species do have different levels of ‘migratoriness’ manifested as migratory range or ambit, then this may well impact on the ecology and population genetics of the predators, wasp parasitoids and pathogens that attack them. -
(Humulus Lupulus L.). Ann Bot 1969, 33:781-793
Molecular and quantitative genetic analyses of hop (Humulus lupulus L.) Erin L. McAdam BBiotech (Hons) School of Plant Science Submitted in fulfilment of the requirements for the degree of Doctor of Philosophy University of Tasmania, August 2013 Statements and Declarations Declaration of originality This thesis contains no material which has been accepted for a degree or diploma by the University of Tasmania or any other institution. To the best of my knowledge and belief, this thesis contains no material previously published or written by another person except where due acknowledgement is made in the text, nor does this thesis contain any material that infringes copyright. …………………….. Date: …………. Erin McAdam Statement regarding published work contained in thesis and authority of access The publishers of the papers comprising Chapters 2 and 3 hold the copyright for that content; access to the material should be sought from the respective journals. The remaining non- published content of this thesis may be made available for loan, limited copying and communication in accordance with the Copyright Act, 1968. …………………….. Date: ………….. Erin McAdam i Statement of co-authorship of published work The following people and institutions contributed to the publications of work undertaken as part of this thesis: Erin L. McAdam, School of Plant Science: Candidate, primary author of all chapters Andreja Cerenak, Slovenian Institute of Hop Research and Brewing: Co-author of papers comprising Chapters 2 and 3 Andrzej Kilian, Diversity Arrays Technology -
Why Cannabaceae Is an Interesting Family?
Why Cannabaceae is an interesting family? Cannabis sativa L., Humulus lupulus L., Humulus japonicus L. Hemp Common hop Japanese hop 2n = 20 2n = 20 2n =16/17 haploid genome size= 818 Mb haploid genome size 2960 Mb haploid genome size = 1568 Mb haploid genome size = 843 Mb haploid genome size 2730 Mb, haploid genome size = 1722Mb Y > X Y < X contains XY1Y2 Female plant has 2n = 20(XX) Female plant has 2n = 20(XX) Y1< X >Y2 Male plant has 2n = 20 (XY) Male plant has 2n = 20 (XY) Female plant has 2n = 16 (XX) Male plant has 2n = 17 (XY1Y2) Analysis of repeatomes in Cannabaceae family The work was supported by RFBR № 20-316-70018\19 and done by J. Bocharkina, O. Razumova, G. Karlov What was our pipeline? 1. DNA extraction (CTAB method); 2. Preparing DNA libraries according to the instructions of commercial kits; 3. Illumina MiSeq sequencing; 4. Quality control; 5. Filtering; 6. Interlacing; 7. RepeatExplorer2 analyzing; 8. RepeatMasker identification; 9. Pairwise scatterplotting; 10. PCR What about repeatomes analysis? 1) The majority of species-specific sequences for both genomes are non-classified repeats- families. And a large amount of known species- specific repeats related to the Ty3/Gypsy family(~8%). 2) Finally, 88 species-specific clusters for the common hop and 10 species-specific clusters for Japanese hop were identified. The highest-copy clusters were selected as candidates for the creating of species-specific markers. 3) The highest-copy clusters were selected as candidates for the development of species-specific markers: For common hop, the clusters: CL2 (Ty3 / Gypsy, Tekay), CL10 (Ty3 / Gypsy, Retand), CL59 (Satellite), CL117 (Ty1 / Copia, Angela); For Japanese hop clusters: CL233 (Ty3 / Gypsy - Retand), CL263 (Satellite). -
Internode Elongation and Strobili Production of Humulus Lupulus Cultivars in Response to Local Strain Sensing William L
www.nature.com/scientificreports OPEN Internode elongation and strobili production of Humulus lupulus cultivars in response to local strain sensing William L. Bauerle Three diferent cultivars of Humulus lupulus L. were subjected to a regime of internode touch and bending under greenhouse conditions. Experiments were performed to assess intraspecifc variability in plant mechanosensing, fower quality, and yield to quantify the thigmomorphogenic impact on plant compactness and fowering performance. Touching and/or touching plus bending the plant shoot internodes located in the apical meristem zone decreased internode elongation and increased width. The growth responses were due partly to touching and/or touching plus bending perturbation, 25.6% and 28% respectively. Growth of new tissue within the local apical portion of the bine continued to remain mechanosensitive. The number of nodes and female fowers produced was unafected by either type of mechanical stress. The study provides evidence that thigmomorphogenic cues can be used as a hop crop management tool to increase bine compactness and increase node density per unit area. The fndings have broad implications for hop production; production can more readily take place in a confned greenhouse space with the aid of mechanical stimulation to control plant growth without sacrifcing yield or fower quality. Te yield potential of Humulus lupulus L. (hop) fowers is linked to the quantity of fertile nodes developed prior to and during the seasonal photoperiod shif that transitions the plant from the vegetative to generative phase of the life cycle. Given that the yield of hops are heavily dependent on the number of fertile nodes per plant, a grower would need to accommodate as many hop nodes per plant as possible to maximize production in a given area. -
Aphid Transmission of Potyvirus: the Largest Plant-Infecting RNA Virus Genus
Supplementary Aphid Transmission of Potyvirus: The Largest Plant-Infecting RNA Virus Genus Kiran R. Gadhave 1,2,*,†, Saurabh Gautam 3,†, David A. Rasmussen 2 and Rajagopalbabu Srinivasan 3 1 Department of Plant Pathology and Microbiology, University of California, Riverside, CA 92521, USA 2 Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC 27606, USA; [email protected] 3 Department of Entomology, University of Georgia, 1109 Experiment Street, Griffin, GA 30223, USA; [email protected] * Correspondence: [email protected]. † Authors contributed equally. Received: 13 May 2020; Accepted: 15 July 2020; Published: date Abstract: Potyviruses are the largest group of plant infecting RNA viruses that cause significant losses in a wide range of crops across the globe. The majority of viruses in the genus Potyvirus are transmitted by aphids in a non-persistent, non-circulative manner and have been extensively studied vis-à-vis their structure, taxonomy, evolution, diagnosis, transmission and molecular interactions with hosts. This comprehensive review exclusively discusses potyviruses and their transmission by aphid vectors, specifically in the light of several virus, aphid and plant factors, and how their interplay influences potyviral binding in aphids, aphid behavior and fitness, host plant biochemistry, virus epidemics, and transmission bottlenecks. We present the heatmap of the global distribution of potyvirus species, variation in the potyviral coat protein gene, and top aphid vectors of potyviruses. Lastly, we examine how the fundamental understanding of these multi-partite interactions through multi-omics approaches is already contributing to, and can have future implications for, devising effective and sustainable management strategies against aphid- transmitted potyviruses to global agriculture. -
Hhop Botany, Cultivation, and Y, , Y, , Breeding
Hop Botany, Cultivation, and Breeding Jason Perrault Perrault Farms, Inc. Hop Breeding Company, LLC Select Botanicals Group, LLCLLC--JohnJohn I. Haas, Inc. All information and images copyright © 2010, Jason Perrault except where noted. Reproduction of any kind is prohibited except with written permission of the author. Hop Botany, Cultivation, and Breeding . Importance of hops. Basic botanical information. Crop development and cultivation. Impact of hop varieties. VitdVariety deve lopmen t. The Importance of Hops Regional Economic Importance . U.S. Production centered in the PNW. 77% in WA. 16% in OR. 7% in ID. 2008 value (US) = $319. 8 million . Annually Top 12 in crop value for Washington Humulus spp. Overview . Family: Cannabaceae . Cannabis . C. sativa . Humulus . H. lupulus . H. japonicus . H. yunnanensis (Neve 1991) Humulus lupulus . “Hops” . Dioecious, perennial, climbing vine . Indigenous to the Northern Hemisphere . Origins in Europe: . H. lupulus var. lupulus . Origins in Asia (mainly Japan): . H. lupulus var. cordifolius . Origins in North America: . H. lupulus var. pubescens . H. lupulus var. neomexicanus . H. lupulus var. lupuloides Hop Basics . Genetically complex. Annual above ground. Perennial below. Allows for clonal propagation. Climbing vine requiring a support system. Photoperiod sensitive . Dioecious (male and female plants). MaleMale--nono commercial value . FemaleFemale--ProducesProduces the valued strobiles, “cones” Hop Cytology / Genetics . 2n = 2x = 20 . Variation in chromosome morphology . Normal bivalent formation during meiosis . Dioecious . SdtidSex determined by X any Y Chromosome interaction . Out Crossing . Large amount of variation Is it an annual or a perennial? . The above ground portion of the stem is annual. Dies off at dormancy. The roo t is perenn ia l, can survive low winter temps. -
Japanese Hop Humulus Japonicus
Weed of the Week Japanese Hop Humulus japonicus Native Origin: E. Asia - Japan, China Description: Japanese Hop is an annual twining, climbing, trailing or prostrate vine with 5-lobed leaves and stems with prickles in the Hemp family (Cannabaceae). Leaves are approximately 2 to 4 inches in length and deeply divided into 5 distinct palmate lobes with separate margins and rough surface. Bracts occur at the base of the leaf petioles. Bracts occur where the leaf petioles attach to the stem. The down-curved bracts and sharp prickles help to identify this plant. Individual flowers are relatively inconspicuous, without petals, and green in color. Flowers occur in clusters with lengths approx. 2”. Habitat: Perennial climber hardy to zone 5 and is not frost tender. The plant prefers light (sandy), medium (loamy) and heavy (clay) soils. The plant grows acid, neutral or basic (alkaline) soils. It can grow in semi-shade (light woodland) or no shade. It requires moist soil and will grow in forests, sunny forest edge, and shaded areas. Distribution: This species is reported from states shaded on Plants Database map. It is reported invasive in CT, DC, DE, IN, MD, PA, and VA. Ecological Impacts: Vines are covered with hooked hairs which makes working with them painful. Dermatitis and blistering may occur when working with these plants, use appropriate protection (gloves, etc.). When forming dense stands, this invasive plant can out-compete native vegetation. Control and Management: • Manual- The plants should be pull plants before seeds set (they flower August– September); remove as much of the rootstock as possible. -
Humulus Japonicus Sieb. & Zucc
Humulus japonicus Sieb. & Zucc. Common Names: Japanese hops Etymology: Humulus is a Latin name of uncertain origin; it may have come from the Low German word “humela” for hop. “Japonicus” means of or belonging to Japan (6). Botanical synonyms: Humulus scandens (Louriero.) Merrill. FAMILY: Cannabaceae, the Hemp Family (also called Cannabidaceae, Cannabiaceae, and Cannabinaceae). Quick Notable Features: ¬ dioecious plant with opposite leaves ¬ small, white staminate flowers and pistillate flowers arranged in pairs in aments ¬ aggressively twining with the apical part of the plant Plant Height: Annual stems of up to 10m, usually 0.5m to 2.5m Subspecies/varieties recognized: none found Most Likely Confused with: Humulus lupulus and Rubus spp., Echinocystis lobata. Distinguished by: This species is similar in appearance, and keys closely, to the related Humulus lupulus. They differ in that H. japonicus is 5-7 lobed and has stiff hairs on the main veins while H. lupulus is 3(to 5) lobed with only soft hairs on leaf undersurfaces. H. lupulus also has a petiole that is shorter than its leaf blade, while H. japonicus has a petiole as long or longer than the leaf blade. The leaves are similar to Echinocystis lobata, a member of the Cucurbitaceae, but the axlillary tendrils on Echinocystis are not found in Humulus, and the presence of downward prickles is only founding Humulus japonicus. It may be confused with 1 Rubus spp. due to similar leaves, but Humulus leaves are opposite, while the Rubus species leaves are alternate. Habitat Preference: Found along “roadsides, waste places and fence-rows” (1). Geographic Distribution in Michigan: found in Cass, Washtenaw, Wayne, and St.