Ecology and Diversity of Indigenous Trichoderma Species in Vegetable Cropping Systems
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The Development of Forest-Based Biorefineries: Implications for Market Behavior and Policy
The Development of Forest-based Biorefineries: Implications for Market Behavior and Policy Patrik Söderholm and Robert Lundmark Abstract and the use of biomass is expected to constitute a major In a forest-based biorefinery, the entire potential of share of the future total use of renewable energy sources forest raw materials and byproducts may be used to pro- in Europe (European Commission 1997, 2006). Essential duce a diverse set of products, including transport fuels, components of national energy policies in Europe, there- chemicals, and pulp and paper products. This paper ana- fore, include not only direct promotion of renewable ener- lyzes the general impact on forest raw material markets gy technologies (e.g., investment and R&D support), but following an increased diffusion of biorefineries and high- also carbon dioxide taxes and emissions trading in carbon lights a number of related public policy issues. The analy- dioxide allowances that discourage the use of fossil fuels. The transition from a fossil fuel-based to a carbon-free sis indicates that the character of forest raw material sup- energy system may have important consequences for the ply, in particular the distinction between main products use of raw materials in society, not the least in cases of and byproducts, will have a major influence on the func- agricultural and forest-based resources. Increases in the tioning and the organization of future forest products mar- relative prices of fossil fuels affect a large number of indus- kets. Moreover, the advent of new uses of forest-based bio- trial and end-use sectors of the economy. -
Laval University
LAVAL UNIVERSITY FACULTY OF FORESTRY AND GEOMATICS Department of Wood and Forest Sciences Sponsored by the International Development Center (IDRC) Ottawa, Canada “The Hidden World that Feeds Us: the Living Soil” Seminars given at the International Institute for Trropical Agriculture (ITA) Univeristy of Ibadan, Nigeria at the International Centre of Research in Agroforestry (ICRAF) Nairobi, Kenya and at the Ukrainian Academy of Agricultural Sciences Kiev, Ukraine by Professor Gilles Lemieux Department of Wood and Forestry Science ORIGINAL FRENCH PUBLICATION Nº 59b http://forestgeomat.ffg.ulaval.ca/brf/ edited by Coordination Group on Ramial Wood Depatment of Wood and Forestry Science Québec G1K 7P4 QUÉBEC CANADA TABLE OF CONTENTS I. A brief history: the evolution of ecosystems and man’s anthropocentric behaviour 1 II. The importance of the forest in tropical climates 2 III. The basic composition of wood 3 1. Lignin and its derivatives and their role in doil dynamic 5 IV. Stem wood and ramial wood 6 1. Stem wood and its lignin 6 2. Ramial wood and its lignin 6 3. Agricultural and forestry trials using ramial wood 7 V. “Organic Matter”, one of the basic principles in agriculture 9 1. Some a posteriori thoughts 10 2. The rationale for chipping 10 3. More like a food than a fertilizer 11 4. The principles behind chipping 11 VI. Lignin 13 1.The nutrients question 14 2.The biological cycling of water in tropical climates 15 3.“Chemical” nutrients 15 4.Nitrogen 15 5.Phosphorus 16 VII. A tentative theory 17 1.Too much or too little water 17 2.The soil-structuring role of lignin 17 3.The role of trophic web 18 4.Living beyond the soil’s chemical constraints 18 5.The major cause of tropical soils degradation. -
Biodiversity of Trichoderma in Neotropics
13 Biodiversity of Trichoderma in Neotropics Lilliana Hoyos-Carvajal1 and John Bissett2 1Universidad Nacional de Colombia, Sede Bogotá 2Agriculture and Agri-Food Canada, Eastern Cereal and Oilseed Research Centre, Ottawa 1Colombia 2Canada 1. Introduction Trichoderma species frequently are predominant over wide geographic regions in all climatic zones, where they are significant decomposers of woody and herbaceous materials. They are characterized by rapid growth, an ability to assimilate a diverse array of substrates, and by their production of an range of antimicrobials. Strains have been exploited for production of enzymes and antibiotics, bioremediation of xenobiotic substances, and as biological control agents against plant pathogenic fungi and nematodes. The main use of Trichoderma in global trade is derived from its high production of enzymes. Trichoderma reesei (teleomorph: Hypocrea jecorina) is the most widely employed cellulolytic organism in the world, although high levels of cellulase production are also seen in other species of this genus (Baig et al., 2003, Watanabe et al., 2006). Worldwide sales of enzymes had reached the figure of $ 1.6 billion by the year 2000 (Demain 2000, cited by Karmakar and Ray, 2011), with an annual growth of 6.5 to 10% not including pharmaceutical enzymes (Stagehands, 2008). Of these, cellulases comprise approximately 20% of the enzymes marketed worldwide (Tramoy et al., 2009). Cellulases of microbial origin are used to process food and animal feed, biofuel production, baking, textiles, detergents, paper pulp, agriculture and research areas at all levels (Karmakar and Ray, 2011). Most cellulases are derived from Trichoderma (section Longibrachiatum in particular) and Aspergillus (Begum et al., 2009). -
The Decomposition of Forest Products in Landfills
International Biodeterioration & Biodegradation Vol. 39, No. 2–3 (1997) 145–158 Published by Elsevier Science Limited Printed in Great Britain PII:S0964-8305(96)00039-X 0964-8305/97 $17.00 + .00 ELSEVIER The Decomposition of Forest Products in Landfills J. A. Micales & K. E. Skog USDA Forest Service, Forest Products Laboratory, One Gifford Pinchot Drive, Madison, WI 53705, USA (Received 3 April 1996; revised version received 25 June 1996; accepted 22 July 1996) Large quantities of forest products are disposed of in landfills annually. The fate of this vast pool of carbon is important since carbon sequestration and the generation of landfill gases have important implications for global warming. Published estimates of methane yields were used to estimate the amount of carbon released into the atmosphere from landfilled forest products. These calculations suggest that maximally only 30%, of the carbon from paper and 0- 3% of the carbon from wood are ever emitted as landfill gas. The remaining carbon, approximately 28 Tg in 1993, remains in the landfill indefinitely. Some of this carbon may be removed during leachate treatment, but a large portion is permanently sequestered where its impact on global warming is negligible. The placement of forest products in landfills serves as a significant carbon sink, and its importance in the global carbon balance should not be overlooked. Published by Elsevier Science Limited INTRODUCTION warming? President Clinton’s Climatic Change Action Plan (Clinton & Gore, 1993) sets a US In 1993, the US Environmental Protection Agency objective of restraining carbon emission growth (EPA) (1994) estimated that 50 Tgl of paper and and increasing sequestration by a total of 100 Tg/ 18.6 Tg of wood were discarded in the United year by the year 2000. -
Molecular Systematics of the Marine Dothideomycetes
available online at www.studiesinmycology.org StudieS in Mycology 64: 155–173. 2009. doi:10.3114/sim.2009.64.09 Molecular systematics of the marine Dothideomycetes S. Suetrong1, 2, C.L. Schoch3, J.W. Spatafora4, J. Kohlmeyer5, B. Volkmann-Kohlmeyer5, J. Sakayaroj2, S. Phongpaichit1, K. Tanaka6, K. Hirayama6 and E.B.G. Jones2* 1Department of Microbiology, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla, 90112, Thailand; 2Bioresources Technology Unit, National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Paholyothin Road, Khlong 1, Khlong Luang, Pathum Thani, 12120, Thailand; 3National Center for Biothechnology Information, National Library of Medicine, National Institutes of Health, 45 Center Drive, MSC 6510, Bethesda, Maryland 20892-6510, U.S.A.; 4Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, 97331, U.S.A.; 5Institute of Marine Sciences, University of North Carolina at Chapel Hill, Morehead City, North Carolina 28557, U.S.A.; 6Faculty of Agriculture & Life Sciences, Hirosaki University, Bunkyo-cho 3, Hirosaki, Aomori 036-8561, Japan *Correspondence: E.B. Gareth Jones, [email protected] Abstract: Phylogenetic analyses of four nuclear genes, namely the large and small subunits of the nuclear ribosomal RNA, transcription elongation factor 1-alpha and the second largest RNA polymerase II subunit, established that the ecological group of marine bitunicate ascomycetes has representatives in the orders Capnodiales, Hysteriales, Jahnulales, Mytilinidiales, Patellariales and Pleosporales. Most of the fungi sequenced were intertidal mangrove taxa and belong to members of 12 families in the Pleosporales: Aigialaceae, Didymellaceae, Leptosphaeriaceae, Lenthitheciaceae, Lophiostomataceae, Massarinaceae, Montagnulaceae, Morosphaeriaceae, Phaeosphaeriaceae, Pleosporaceae, Testudinaceae and Trematosphaeriaceae. Two new families are described: Aigialaceae and Morosphaeriaceae, and three new genera proposed: Halomassarina, Morosphaeria and Rimora. -
Influence of Hemicelluloses Content on the Paper Quality Produced with Eucalyptus Globulus Fibres
CORE Metadata, citation and similar papers at core.ac.uk Provided by Repositório Científico do Instituto Politécnico de Castelo Branco Proceedings of Progress in Paper Physics Seminar 2004, Norway, Trondheim, 21 a 24 de Junho, p. 50-52 Influence of hemicelluloses content on the paper quality produced with Eucalyptus globulus fibres. Ofélia Anjos1, António Santos2, and Rogério Simões2 1Escola Superior de Agrária – 6001-909 Castelo Branco, Portugal, [email protected] 2Universidade da Beira Interior, 6201-001 Covilhã, Portugal, [email protected] Abstract The raw-material composition and the cooking conditions determine the pulp composition and this affect the behaviour of the pulp in the beating process and the papermaking potential. However, at industrial scale the variability of the pulp composition, for a given raw material and a given process, is relatively low and usually it is difficult to quantify the impacts of pulp composition on beating and papermaking. In the present study E. globulus bleached pulps were produced under different cooking conditions by the kraft process in order to obtain pulps with significant different hemicelluloses content (19% versus 14.5%). The behaviour of the pulps in beating and the papermaking potential were investigated under two beating intensities in the PFI mill and at four beating times. The pulp suspensions were characterised in terms of drainability, fibre morphology, wet fibre flexibility and relative bonded area. The paper produced was evaluated in terms of structural, superficial, mechanical and optical properties. The results showed the clear effect of the hemicelluloses content on the beating rate as well as on the paper properties. -
Trichoderma- Foliar Pathogen Interactions
Send Orders for Reprints to [email protected] 58 The Open Mycology Journal, 2014, 8, (Suppl-1, M3) 58-70 Open Access Trichoderma- Foliar Pathogen Interactions Indu S Sawant* Principal Scientist, Plant Pathology, National Research Centre for Grapes (ICAR), Pune, Maharashtra, India Abstract: Among the group of ubiquitous soil inhabiting fungi, Trichoderma species are of considerable commercial importance due to their ability to suppress many plant pathogenic fungi. They have been widely studied and employed for management of root and seedling diseases of many crops since decades. In recent years they are also being utilized for minimising diseases of foliar plant parts, especially to supress grey mold caused due to infections of Botrytis cinerea and powdery mildews on a number of crops. They also express potential to control downy mildews and have improved the shelf life of grapes. Out of the eighty-nine species of Trichoderma, a number of species exhibit the bio-control activity. The destruction of host hyphae and protoplasm by the various lytic enzymes and toxic volatile and non-volatile compounds produced by these species are the major mechanism of bio-control; apart from deactivation of pathogen enzymes and induction of systemic resistance in host plants. However, significant differences in antagonistic potential among isolates even from the same species from the same niche is observed; and hence selection of a strain with wide host range and environment adaptability becomes a key issue for sustainable biological control. Keywords: Botrytis cinerea, Colletotrichum gloeosporioides, fungicide, induced systemic resistance, mechanism, Plasmopara viticola, powdery mildew, Trichoderma. 1. THE GENUS TRICHODERMA deficit, gases, air pollutants, wind, radiation, etc. -
Two New Species and a New Chinese Record of Hypocreaceae As Evidenced by Morphological and Molecular Data
MYCOBIOLOGY 2019, VOL. 47, NO. 3, 280–291 https://doi.org/10.1080/12298093.2019.1641062 RESEARCH ARTICLE Two New Species and a New Chinese Record of Hypocreaceae as Evidenced by Morphological and Molecular Data Zhao Qing Zeng and Wen Ying Zhuang State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, P.R. China ABSTRACT ARTICLE HISTORY To explore species diversity of Hypocreaceae, collections from Guangdong, Hubei, and Tibet Received 13 February 2019 of China were examined and two new species and a new Chinese record were discovered. Revised 27 June 2019 Morphological characteristics and DNA sequence analyses of the ITS, LSU, EF-1a, and RPB2 Accepted 4 July 2019 regions support their placements in Hypocreaceae and the establishments of the new spe- Hypomyces hubeiensis Agaricus KEYWORDS cies. sp. nov. is characterized by occurrence on fruitbody of Hypomyces hubeiensis; sp., concentric rings formed on MEA medium, verticillium-like conidiophores, subulate phia- morphology; phylogeny; lides, rod-shaped to narrowly ellipsoidal conidia, and absence of chlamydospores. Trichoderma subiculoides Trichoderma subiculoides sp. nov. is distinguished by effuse to confluent rudimentary stro- mata lacking of a well-developed flank and not changing color in KOH, subcylindrical asci containing eight ascospores that disarticulate into 16 dimorphic part-ascospores, verticillium- like conidiophores, subcylindrical phialides, and subellipsoidal to rod-shaped conidia. Morphological distinctions between the new species and their close relatives are discussed. Hypomyces orthosporus is found for the first time from China. 1. Introduction Members of the genus are mainly distributed in temperate and tropical regions and economically The family Hypocreaceae typified by Hypocrea Fr. -
The Phylogeny of Plant and Animal Pathogens in the Ascomycota
Physiological and Molecular Plant Pathology (2001) 59, 165±187 doi:10.1006/pmpp.2001.0355, available online at http://www.idealibrary.com on MINI-REVIEW The phylogeny of plant and animal pathogens in the Ascomycota MARY L. BERBEE* Department of Botany, University of British Columbia, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada (Accepted for publication August 2001) What makes a fungus pathogenic? In this review, phylogenetic inference is used to speculate on the evolution of plant and animal pathogens in the fungal Phylum Ascomycota. A phylogeny is presented using 297 18S ribosomal DNA sequences from GenBank and it is shown that most known plant pathogens are concentrated in four classes in the Ascomycota. Animal pathogens are also concentrated, but in two ascomycete classes that contain few, if any, plant pathogens. Rather than appearing as a constant character of a class, the ability to cause disease in plants and animals was gained and lost repeatedly. The genes that code for some traits involved in pathogenicity or virulence have been cloned and characterized, and so the evolutionary relationships of a few of the genes for enzymes and toxins known to play roles in diseases were explored. In general, these genes are too narrowly distributed and too recent in origin to explain the broad patterns of origin of pathogens. Co-evolution could potentially be part of an explanation for phylogenetic patterns of pathogenesis. Robust phylogenies not only of the fungi, but also of host plants and animals are becoming available, allowing for critical analysis of the nature of co-evolutionary warfare. Host animals, particularly human hosts have had little obvious eect on fungal evolution and most cases of fungal disease in humans appear to represent an evolutionary dead end for the fungus. -
Hypocrea Stilbohypoxyli and Its Trichoderma Koningii-Like Anamorph: a New Species from Puerto Rico on Stilbohypoxylon Moelleri
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Sydowia Jahr/Year: 2003 Band/Volume: 55 Autor(en)/Author(s): Lu Bingsheng, Samuels Gary J. Artikel/Article: Hypocrea stilbohypoxyli and its Trichoderma koningii-like anamorph: a new species from Puerto Rico on Stilbohypoxylon moelleri. 255-266 ©Verlag Ferdinand Berger & Söhne Ges.m.b.H., Horn, Austria, download unter www.biologiezentrum.at Hypocrea stilbohypoxyli and its Trichoderma koningii-like anamorph: a new species from Puerto Rico on Stilbohypoxylon moelleri Bingsheng Lu1* & Gary J. Samuels2 1 Department of Plant Pathology, Agronomy College, Shanxi Agricultural University, Taigu, Shanxi 030801, China 2 USDA-ARS, Systematic Botany and Mycology Laboratory, Rm.304, B-011A, BARC-West, Beltsville, Maryland 20705-2350, USA Lu, B. S. & G. J. Samuels (2003). Hypocrea stilbohypoxyli and its Tricho- derma koningii-like anamorph: a new species from Puerto Rico on Stilbohypoxylon moelleri. - Sydowia 55 (2): 255-266. The new species Hypocrea stilbohypoxyli and its Trichoderma anamorph are described. The species is known only from Puerto Rico where it grows on stromata of Stilbohypoxylon moelleri (Xylariales, Xylariaceae). Hypocrea stilbohypoxyli is readily distinguished from the morphologically most similar H. koningii/T. koningii by its substratum and slower growth rate, which is especially evident on SNA. Stromata are morphologically very similar to those of H. koningii and H. rufa. The anamorph is morphologically close to T. koningii, differing from T! koningii in having somewhat shorter and wider conidia. Hypocrea stilbohypoxyli differs from H. koningii/T. koningii in 3 bp in ITS-1 and 2 bp in ITS-2 sequences. -
Timber Bridges Design, Construction, Inspection, and Maintenance
Timber Bridges Design, Construction, Inspection, and Maintenance Michael A. Ritter, Structural Engineer United States Department of Agriculture Forest Service Ritter, Michael A. 1990. Timber Bridges: Design, Construction, Inspection, and Maintenance. Washington, DC: 944 p. ii ACKNOWLEDGMENTS The author acknowledges the following individuals, Agencies, and Associations for the substantial contributions they made to this publication: For contributions to Chapter 1, Fong Ou, Ph.D., Civil Engineer, USDA Forest Service, Engineering Staff, Washington Office. For contributions to Chapter 3, Jerry Winandy, Research Forest Products Technologist, USDA Forest Service, Forest Products Laboratory. For contributions to Chapter 8, Terry Wipf, P.E., Ph.D., Associate Professor of Structural Engineering, Iowa State University, Ames, Iowa. For administrative overview and support, Clyde Weller, Civil Engineer, USDA Forest Service, Engineering Staff, Washington Office. For consultation and assistance during preparation and review, USDA Forest Service Bridge Engineers, Steve Bunnell, Frank Muchmore, Sakee Poulakidas, Ron Schmidt, Merv Eriksson, and David Summy; Russ Moody and Alan Freas (retired) of the USDA Forest Service, Forest Products Laboratory; Dave Pollock of the National Forest Products Association; and Lorraine Krahn and James Wacker, former students at the University of Wisconsin at Madison. In addition, special thanks to Mary Jane Baggett and Jim Anderson for editorial consultation, JoAnn Benisch for graphics preparation and layout, and Stephen Schmieding and James Vargo for photographic support. iii iv CONTENTS CHAPTER 1 TIMBER AS A BRIDGE MATERIAL 1.1 Introduction .............................................................................. l- 1 1.2 Historical Development of Timber Bridges ............................. l-2 Prehistory Through the Middle Ages ....................................... l-3 Middle Ages Through the 18th Century ................................... l-5 19th Century ............................................................................ -
Trichoderma: the “Secrets” of a Multitalented Biocontrol Agent
plants Review Trichoderma: The “Secrets” of a Multitalented Biocontrol Agent 1, 1, 2 3 Monika Sood y, Dhriti Kapoor y, Vipul Kumar , Mohamed S. Sheteiwy , Muthusamy Ramakrishnan 4 , Marco Landi 5,6,* , Fabrizio Araniti 7 and Anket Sharma 4,* 1 School of Bioengineering and Biosciences, Lovely Professional University, Jalandhar-Delhi G.T. Road (NH-1), Phagwara, Punjab 144411, India; [email protected] (M.S.); [email protected] (D.K.) 2 School of Agriculture, Lovely Professional University, Delhi-Jalandhar Highway, Phagwara, Punjab 144411, India; [email protected] 3 Department of Agronomy, Faculty of Agriculture, Mansoura University, Mansoura 35516, Egypt; [email protected] 4 State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou 311300, China; [email protected] 5 Department of Agriculture, University of Pisa, I-56124 Pisa, Italy 6 CIRSEC, Centre for Climatic Change Impact, University of Pisa, Via del Borghetto 80, I-56124 Pisa, Italy 7 Dipartimento AGRARIA, Università Mediterranea di Reggio Calabria, Località Feo di Vito, SNC I-89124 Reggio Calabria, Italy; [email protected] * Correspondence: [email protected] (M.L.); [email protected] (A.S.) Authors contributed equal. y Received: 25 May 2020; Accepted: 16 June 2020; Published: 18 June 2020 Abstract: The plant-Trichoderma-pathogen triangle is a complicated web of numerous processes. Trichoderma spp. are avirulent opportunistic plant symbionts. In addition to being successful plant symbiotic organisms, Trichoderma spp. also behave as a low cost, effective and ecofriendly biocontrol agent. They can set themselves up in various patho-systems, have minimal impact on the soil equilibrium and do not impair useful organisms that contribute to the control of pathogens.