Chapter 7. Glossary of Ecological Terms
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												Glossary - Cellbiology
1 Glossary - Cellbiology Blotting: (Blot Analysis) Widely used biochemical technique for detecting the presence of specific macromolecules (proteins, mRNAs, or DNA sequences) in a mixture. A sample first is separated on an agarose or polyacrylamide gel usually under denaturing conditions; the separated components are transferred (blotting) to a nitrocellulose sheet, which is exposed to a radiolabeled molecule that specifically binds to the macromolecule of interest, and then subjected to autoradiography. Northern B.: mRNAs are detected with a complementary DNA; Southern B.: DNA restriction fragments are detected with complementary nucleotide sequences; Western B.: Proteins are detected by specific antibodies. Cell: The fundamental unit of living organisms. Cells are bounded by a lipid-containing plasma membrane, containing the central nucleus, and the cytoplasm. Cells are generally capable of independent reproduction. More complex cells like Eukaryotes have various compartments (organelles) where special tasks essential for the survival of the cell take place. Cytoplasm: Viscous contents of a cell that are contained within the plasma membrane but, in eukaryotic cells, outside the nucleus. The part of the cytoplasm not contained in any organelle is called the Cytosol. Cytoskeleton: (Gk. ) Three dimensional network of fibrous elements, allowing precisely regulated movements of cell parts, transport organelles, and help to maintain a cell’s shape. • Actin filament: (Microfilaments) Ubiquitous eukaryotic cytoskeletal proteins (one end is attached to the cell-cortex) of two “twisted“ actin monomers; are important in the structural support and movement of cells. Each actin filament (F-actin) consists of two strands of globular subunits (G-Actin) wrapped around each other to form a polarized unit (high ionic cytoplasm lead to the formation of AF, whereas low ion-concentration disassembles AF). - 
												
												Landscape Appurtenant to Residential, Commercial, Industrial, and Institutional Development; And
RESOLUTION NO. 2007- 116 A RESOLUTION OF THE CITY COUNCIL OF THE CITY OF THOUSAND OAKS ADOPTING REVISED GUIDELINES AND STANDARDS FOR LANDSCAPE PLANTING AND IRRIGATION PLANS AND RESCINDING RESOLUTION NO. 93- 74 WHEREAS, the City of Thousand Oaks seeks to improve the physical, social, economic and aesthetic environment by proper design and construction of landscape appurtenant to residential, commercial, industrial, and institutional development; and WHEREAS, landscaping, to be fully appropriate, effective, and have long- term viability, must be designed into the project from the beginning of the design effort; and WHEREAS, appropriate designed landscaping contributes to the beauty and well- being in the City and said landscaping ( xeriscape) should be designed with the need to conserve water within the community; and NOW, THEREFORE, the City Council of the City of Thousand Oaks does resolve as follows: 1. Council Resolution No. 93- 74 IS hereby rescinded and superseded by this resolution. 2. The attached " Guidelines and Standards for Landscape Planting and Irrigation Plans" (Attachment A) are hereby adopted. 3. All new and remodeled developments which require a development permit, major modification, or other entitlement pursuant to Title 9 of the Municipal Code, shall be landscaped to include planting, irrigation system and maintenance of said landscaping improvements in accordance with the attached Guidelines and Standards for Landscape Planting and Irrigation Plans". ATTEST: U~ Linda D. Lawrence, City Clerk r CDD:460- 20/ I./ cdd/ council/ ceres 2007/ MCA 2006- 70478 city Res. No. 2007- 116 Page 1 APPROVED AS TO FORM: Office of City Attorney omeY CERTIFICATION STATE OF CALIFORNIA ) COUNTY OF VENTURA ) SS. - 
												
												Buzzle – Zoology Terms – Glossary of Biology Terms and Definitions Http
Buzzle – Zoology Terms – Glossary of Biology Terms and Definitions http://www.buzzle.com/articles/biology-terms-glossary-of-biology-terms-and- definitions.html#ZoologyGlossary Biology is the branch of science concerned with the study of life: structure, growth, functioning and evolution of living things. This discipline of science comprises three sub-disciplines that are botany (study of plants), Zoology (study of animals) and Microbiology (study of microorganisms). This vast subject of science involves the usage of myriads of biology terms, which are essential to be comprehended correctly. People involved in the science field encounter innumerable jargons during their study, research or work. Moreover, since science is a part of everybody's life, it is something that is important to all individuals. A Abdomen: Abdomen in mammals is the portion of the body which is located below the rib cage, and in arthropods below the thorax. It is the cavity that contains stomach, intestines, etc. Abscission: Abscission is a process of shedding or separating part of an organism from the rest of it. Common examples are that of, plant parts like leaves, fruits, flowers and bark being separated from the plant. Accidental: Accidental refers to the occurrences or existence of all those species that would not be found in a particular region under normal circumstances. Acclimation: Acclimation refers to the morphological and/or physiological changes experienced by various organisms to adapt or accustom themselves to a new climate or environment. Active Transport: The movement of cellular substances like ions or molecules by traveling across the membrane, towards a higher level of concentration while consuming energy. - 
												
												Plant Evolution an Introduction to the History of Life
Plant Evolution An Introduction to the History of Life KARL J. NIKLAS The University of Chicago Press Chicago and London CONTENTS Preface vii Introduction 1 1 Origins and Early Events 29 2 The Invasion of Land and Air 93 3 Population Genetics, Adaptation, and Evolution 153 4 Development and Evolution 217 5 Speciation and Microevolution 271 6 Macroevolution 325 7 The Evolution of Multicellularity 377 8 Biophysics and Evolution 431 9 Ecology and Evolution 483 Glossary 537 Index 547 v Introduction The unpredictable and the predetermined unfold together to make everything the way it is. It’s how nature creates itself, on every scale, the snowflake and the snowstorm. — TOM STOPPARD, Arcadia, Act 1, Scene 4 (1993) Much has been written about evolution from the perspective of the history and biology of animals, but significantly less has been writ- ten about the evolutionary biology of plants. Zoocentricism in the biological literature is understandable to some extent because we are after all animals and not plants and because our self- interest is not entirely egotistical, since no biologist can deny the fact that animals have played significant and important roles as the actors on the stage of evolution come and go. The nearly romantic fascination with di- nosaurs and what caused their extinction is understandable, even though we should be equally fascinated with the monarchs of the Carboniferous, the tree lycopods and calamites, and with what caused their extinction (fig. 0.1). Yet, it must be understood that plants are as fascinating as animals, and that they are just as important to the study of biology in general and to understanding evolutionary theory in particular. - 
												
												Landscape Approach in Addressing Land Use and Tenure Arrangements Among Pastoral Commnities in Eastern Africa: the Case of Tanzania
LANDSCAPE APPROACH IN ADDRESSING LAND USE AND TENURE ARRANGEMENTS AMONG PASTORAL COMMNITIES IN EASTERN AFRICA: THE CASE OF TANZANIA Working paper STEPHEN NINDI (1), FIONA FLINTAN (2), DEUS KALENZI (2), VICTOR MWITA (3), ISAACK LUAMBANO (2) Paper prepared for presentation at the “2018 WORLD BANK CONFERENCE ON LAND AND POVERTY” The World Bank - Washington DC, March 25-29, 2019 Copyright 2019 by author(s). All rights reserved. Readers may make verbatim copies of this document for non-commercial purposes by any means, provided that this copyright notice appears on all such copies. Abstract Land use and tenure related conflicts are not new in Tanzania including between farmers and livestock herders. Conflicts are increasingly becoming common places as human and animal population heightens, urbanization grows and increases in other land uses such as agriculture, mining, infrastructure development and other emerging uses. Pastoralists are used to their mobility to ensure sustainable availability of pasture, water and minerals and maintenance of gene diversity. Nonetheless, economic and human development processes have tremendously reduced land available for pastoral mobility resulting in increasing challenges over access to resources and land. For decades conventional village spatial planning has further restricted pastoral movement within village jurisdiction boundaries. Recently, spatial planners have embarked on developing Joint Village Land Use Plans and Agreements to enable more space and diversity for pastoral mobility, protecting shared grazing areas across village boundaries as part of this. As part of a wider and an integrated approach that looks at the challenge in its holistic and integral manner, there is opportunity for reconciling different land uses in the landscape and improving mutual benefits. - 
												
												Number of Living Species in Australia and the World
Numbers of Living Species in Australia and the World 2nd edition Arthur D. Chapman Australian Biodiversity Information Services australia’s nature Toowoomba, Australia there is more still to be discovered… Report for the Australian Biological Resources Study Canberra, Australia September 2009 CONTENTS Foreword 1 Insecta (insects) 23 Plants 43 Viruses 59 Arachnida Magnoliophyta (flowering plants) 43 Protoctista (mainly Introduction 2 (spiders, scorpions, etc) 26 Gymnosperms (Coniferophyta, Protozoa—others included Executive Summary 6 Pycnogonida (sea spiders) 28 Cycadophyta, Gnetophyta under fungi, algae, Myriapoda and Ginkgophyta) 45 Chromista, etc) 60 Detailed discussion by Group 12 (millipedes, centipedes) 29 Ferns and Allies 46 Chordates 13 Acknowledgements 63 Crustacea (crabs, lobsters, etc) 31 Bryophyta Mammalia (mammals) 13 Onychophora (velvet worms) 32 (mosses, liverworts, hornworts) 47 References 66 Aves (birds) 14 Hexapoda (proturans, springtails) 33 Plant Algae (including green Reptilia (reptiles) 15 Mollusca (molluscs, shellfish) 34 algae, red algae, glaucophytes) 49 Amphibia (frogs, etc) 16 Annelida (segmented worms) 35 Fungi 51 Pisces (fishes including Nematoda Fungi (excluding taxa Chondrichthyes and (nematodes, roundworms) 36 treated under Chromista Osteichthyes) 17 and Protoctista) 51 Acanthocephala Agnatha (hagfish, (thorny-headed worms) 37 Lichen-forming fungi 53 lampreys, slime eels) 18 Platyhelminthes (flat worms) 38 Others 54 Cephalochordata (lancelets) 19 Cnidaria (jellyfish, Prokaryota (Bacteria Tunicata or Urochordata sea anenomes, corals) 39 [Monera] of previous report) 54 (sea squirts, doliolids, salps) 20 Porifera (sponges) 40 Cyanophyta (Cyanobacteria) 55 Invertebrates 21 Other Invertebrates 41 Chromista (including some Hemichordata (hemichordates) 21 species previously included Echinodermata (starfish, under either algae or fungi) 56 sea cucumbers, etc) 22 FOREWORD In Australia and around the world, biodiversity is under huge Harnessing core science and knowledge bases, like and growing pressure. - 
												
												Evolution by Natural Selection, Formulated Independently by Charles Darwin and Alfred Russel Wallace
UNIT 4 EVOLUTIONARY PATT EVOLUTIONARY E RNS AND PROC E SS E Evolution by Natural S 22 Selection Natural selection In this chapter you will learn that explains how Evolution is one of the most populations become important ideas in modern biology well suited to their environments over time. The shape and by reviewing by asking by applying coloration of leafy sea The rise of What is the evidence for evolution? Evolution in action: dragons (a fish closely evolutionary thought two case studies related to seahorses) 22.1 22.4 are heritable traits that with regard to help them to hide from predators. The pattern of evolution: The process of species have changed evolution by natural and are related 22.2 selection 22.3 keeping in mind Common myths about natural selection and adaptation 22.5 his chapter is about one of the great ideas in science: the theory of evolution by natural selection, formulated independently by Charles Darwin and Alfred Russel Wallace. The theory explains how T populations—individuals of the same species that live in the same area at the same time—have come to be adapted to environments ranging from arctic tundra to tropical wet forest. It revealed one of the five key attributes of life: Populations of organisms evolve. In other words, the heritable characteris- This chapter is part of the tics of populations change over time (Chapter 1). Big Picture. See how on Evolution by natural selection is one of the best supported and most important theories in the history pages 516–517. of scientific research. - 
												
												Marine Microplankton Ecology Reading
Marine Microplankton Ecology Reading Microbes dominate our planet, especially the Earth’s oceans. The distinguishing feature of microorganisms is their small size, usually defined as less than 200 micrometers (µm); they are all invisible to the naked eye. As a group, sea microbes are extremely diverse, and extremely versatile with respect to their abilities to make and eat food. All marine microbes are too small to swim against the current and are therefore classified as plankton. First we will discuss several ways to classify marine microbes. 1. Size Planktonic marine organisms can be divided into the following size categories: Category Size femtoplankton <0.2 µm picoplankton 0.2-2 µm nanoplankton 2-20 µm microplankton 20-200 µm mesoplankton 200-2000 µm In this laboratory we are concerned with the microscopic portion of the plankton, less than 200 µm. These organisms are not visible to the naked eye (Figure 1). Figure 1. Size classes of marine plankton 2. Type A. Viruses Viruses are the smallest and simplest microplankton. They range from 0.01 to 0.3 um in diameter. Externally, viruses have a capsid, or protein coat. Viruses can also have simple or complex external morphologies with tail fibers and structures that are used to inject DNA or RNA into their host. Viruses have little internal morphology. They do not have a nucleus or organelles. They do not have chlorophyll. Inside a virus there is only nucleic acid, either DNA or RNA. Viruses do not grow and have no metabolism. Marine viruses are highly abundant. There are up to 10 billion in one liter of seawater! B. - 
												
												Parasitism and the Biodiversity-Functioning Relationship
TREE 2355 No. of Pages 9 Opinion Parasitism and the Biodiversity-Functioning Relationship André Frainer,1,2,* Brendan G. McKie,3 Per-Arne Amundsen,1 Rune Knudsen,1 and Kevin D. Lafferty4 Species interactions can influence ecosystem functioning by enhancing or Highlights suppressing the activities of species that drive ecosystem processes, or by Biodiversity affects ecosystem causing changes in biodiversity. However, one important class of species functioning. interactions – parasitism – has been little considered in biodiversity and eco- Biodiversity may decrease or increase system functioning (BD-EF) research. Parasites might increase or decrease parasitism. ecosystem processes by reducing host abundance. Parasites could also Parasites impair individual hosts and increase trait diversity by suppressing dominant species or by increasing affect their role in the ecosystem. within-host trait diversity. These different mechanisms by which parasites Parasitism, in common with competi- might affect ecosystem function pose challenges in predicting their net effects. tion, facilitation, and predation, could Nonetheless, given the ubiquity of parasites, we propose that parasite–host regulate BD-EF relationships. interactions should be incorporated into the BD-EF framework. Parasitism affects host phenotypes,[216_TD$IF] including changes to host morphol- Incorporating Parasitism into the BD-EF framework ogy, behavior, and physiology, which How might biodiversity (see Glossary), ecosystem functioning, and the relationships might increase intra- and interspecific between biodiversity and ecosystem functioning respond to parasitism? Parasites are ubiq- functional diversity. uitous organisms with the potential to regulate and limit host abundance [1] as well as the The effects of parasitism on host abun- ecosystem processes that such hosts influence [2,3]. - 
												
												Ecoevoapps: Interactive Apps for Teaching Theoretical Models In
bioRxiv preprint doi: https://doi.org/10.1101/2021.06.18.449026; this version posted June 19, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 Last rendered: 18 Jun 2021 2 Running head: EcoEvoApps 3 EcoEvoApps: Interactive Apps for Teaching Theoretical 4 Models in Ecology and Evolutionary Biology 5 Preprint for bioRxiv 6 Keywords: active learning, pedagogy, mathematical modeling, R package, shiny apps 7 Word count: 4959 words in the Main Body; 148 words in the Abstract 8 Supplementary materials: Supplemental PDF with 7 components (S1-S7) 1∗ 1∗ 2∗ 1 9 Authors: Rosa M. McGuire , Kenji T. Hayashi , Xinyi Yan , Madeline C. Cowen , Marcel C. 1 3 3,4 10 Vaz , Lauren L. Sullivan , Gaurav S. Kandlikar 1 11 Department of Ecology and Evolutionary Biology, University of California, Los Angeles 2 12 Department of Integrative Biology, University of Texas at Austin 3 13 Division of Biological Sciences, University of Missouri, Columbia 4 14 Division of Plant Sciences, University of Missouri, Columbia ∗ 15 These authors contributed equally to the writing of the manuscript, and author order was 16 decided with a random number generator. 17 Authors for correspondence: 18 Rosa M. McGuire: [email protected] 19 Kenji T. Hayashi: [email protected] 20 Xinyi Yan: [email protected] 21 Gaurav S. Kandlikar: [email protected] 22 Coauthor contact information: 23 Madeline C. Cowen: [email protected] 24 Marcel C. - 
												
												MF-Romanticism .Pdf
Europe and America, 1800 to 1870 1 Napoleonic Europe 1800-1815 2 3 Goals • Discuss Romanticism as an artistic style. Name some of its frequently occurring subject matter as well as its stylistic qualities. • Compare and contrast Neoclassicism and Romanticism. • Examine reasons for the broad range of subject matter, from portraits and landscape to mythology and history. • Discuss initial reaction by artists and the public to the new art medium known as photography 4 30.1 From Neoclassicism to Romanticism • Understand the philosophical and stylistic differences between Neoclassicism and Romanticism. • Examine the growing interest in the exotic, the erotic, the landscape, and fictional narrative as subject matter. • Understand the mixture of classical form and Romantic themes, and the debates about the nature of art in the 19th century. • Identify artists and architects of the period and their works. 5 Neoclassicism in Napoleonic France • Understand reasons why Neoclassicism remained the preferred style during the Napoleonic period • Recall Neoclassical artists of the Napoleonic period and how they served the Empire 6 Figure 30-2 JACQUES-LOUIS DAVID, Coronation of Napoleon, 1805–1808. Oil on canvas, 20’ 4 1/2” x 32’ 1 3/4”. Louvre, Paris. 7 Figure 29-23 JACQUES-LOUIS DAVID, Oath of the Horatii, 1784. Oil on canvas, approx. 10’ 10” x 13’ 11”. Louvre, Paris. 8 Figure 30-3 PIERRE VIGNON, La Madeleine, Paris, France, 1807–1842. 9 Figure 30-4 ANTONIO CANOVA, Pauline Borghese as Venus, 1808. Marble, 6’ 7” long. Galleria Borghese, Rome. 10 Foreshadowing Romanticism • Notice how David’s students retained Neoclassical features in their paintings • Realize that some of David’s students began to include subject matter and stylistic features that foreshadowed Romanticism 11 Figure 30-5 ANTOINE-JEAN GROS, Napoleon at the Pesthouse at Jaffa, 1804. - 
												
												Gastrointestinal Motility Physiology
GASTROINTESTINAL MOTILITY PHYSIOLOGY JAYA PUNATI, MD DIRECTOR, PEDIATRIC GASTROINTESTINAL, NEUROMUSCULAR AND MOTILITY DISORDERS PROGRAM DIVISION OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION, CHILDREN’S HOSPITAL LOS ANGELES VRINDA BHARDWAJ, MD DIVISION OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION CHILDREN’S HOSPITAL LOS ANGELES EDITED BY: CHRISTINE WAASDORP HURTADO, MD REVIEWED BY: JOSEPH CROFFIE, MD, MPH NASPGHAN PHYSIOLOGY EDUCATION SERIES SERIES EDITORS: CHRISTINE WAASDORP HURTADO, MD, MSCS, FAAP [email protected] DANIEL KAMIN, MD [email protected] CASE STUDY 1 • 14 year old female • With no significant past medical history • Presents with persistent vomiting and 20 lbs weight loss x 3 months • Initially emesis was intermittent, occurred before bedtime or soon there after, 2-3 hrs after a meal • Now occurring immediately or up to 30 minutes after a meal • Emesis consists of undigested food and is nonbloody and nonbilious • Associated with heartburn and chest discomfort 3 CASE STUDY 1 • Initial screening blood work was unremarkable • A trial of acid blockade was started with improvement in heartburn only • Antiemetic therapy with ondansetron showed no improvement • Upper endoscopy on acid blockade was normal 4 CASE STUDY 1 Differential for functional/motility disorders: • Esophageal disorders: – Achalasia – Gastroesophageal Reflux – Other esophageal dysmotility disorders • Gastric disorders: – Gastroparesis – Rumination syndrome – Gastric outlet obstruction : pyloric stricture, pyloric stenosis •