An Overview of the Topic There Are Several Important Name Reactions in Organic Chemistry, Called Such Because They Either Bear
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Aldrich FT-IR Collection Edition I Library
Aldrich FT-IR Collection Edition I Library Library Listing – 10,505 spectra This library is the original FT-IR spectral collection from Aldrich. It includes a wide variety of pure chemical compounds found in the Aldrich Handbook of Fine Chemicals. The Aldrich Collection of FT-IR Spectra Edition I library contains spectra of 10,505 pure compounds and is a subset of the Aldrich Collection of FT-IR Spectra Edition II library. All spectra were acquired by Sigma-Aldrich Co. and were processed by Thermo Fisher Scientific. Eight smaller Aldrich Material Specific Sub-Libraries are also available. Aldrich FT-IR Collection Edition I Index Compound Name Index Compound Name 3515 ((1R)-(ENDO,ANTI))-(+)-3- 928 (+)-LIMONENE OXIDE, 97%, BROMOCAMPHOR-8- SULFONIC MIXTURE OF CIS AND TRANS ACID, AMMONIUM SALT 209 (+)-LONGIFOLENE, 98+% 1708 ((1R)-ENDO)-(+)-3- 2283 (+)-MURAMIC ACID HYDRATE, BROMOCAMPHOR, 98% 98% 3516 ((1S)-(ENDO,ANTI))-(-)-3- 2966 (+)-N,N'- BROMOCAMPHOR-8- SULFONIC DIALLYLTARTARDIAMIDE, 99+% ACID, AMMONIUM SALT 2976 (+)-N-ACETYLMURAMIC ACID, 644 ((1S)-ENDO)-(-)-BORNEOL, 99% 97% 9587 (+)-11ALPHA-HYDROXY-17ALPHA- 965 (+)-NOE-LACTOL DIMER, 99+% METHYLTESTOSTERONE 5127 (+)-P-BROMOTETRAMISOLE 9590 (+)-11ALPHA- OXALATE, 99% HYDROXYPROGESTERONE, 95% 661 (+)-P-MENTH-1-EN-9-OL, 97%, 9588 (+)-17-METHYLTESTOSTERONE, MIXTURE OF ISOMERS 99% 730 (+)-PERSEITOL 8681 (+)-2'-DEOXYURIDINE, 99+% 7913 (+)-PILOCARPINE 7591 (+)-2,3-O-ISOPROPYLIDENE-2,3- HYDROCHLORIDE, 99% DIHYDROXY- 1,4- 5844 (+)-RUTIN HYDRATE, 95% BIS(DIPHENYLPHOSPHINO)BUT 9571 (+)-STIGMASTANOL -
Synthesis of Indole and Oxindole Derivatives Incorporating Pyrrolidino, Pyrrolo Or Imidazolo Moieties
From DEPARTMENT OF BIOSCIENCES AT NOVUM Karolinska Institutet, Stockholm, Sweden SYNTHESIS OF INDOLE AND OXINDOLE DERIVATIVES INCORPORATING PYRROLIDINO, PYRROLO OR IMIDAZOLO MOIETIES Stanley Rehn Stockholm 2004 All previously published papers have been reproduced with permission from the publishers. Published and printed by Karolinska University Press Box 200, SE-171 77 Stockholm, Sweden © Stanley Rehn, 2004 ISBN 91-7140-169-5 Till Amanda Abstract The focus of this thesis is on the synthesis of oxindole- and indole-derivatives incorporating pyrrolidins, pyrroles or imidazoles moieties. Pyrrolidino-2-spiro-3’-oxindole derivatives have been prepared in high yielding three-component reactions between isatin, α-amino acid derivatives, and suitable dipolarophiles. Condensation between isatin and an α-amino acid yielded a cyclic intermediate, an oxazolidinone, which decarboxylate to give a 1,3-dipolar species, an azomethine ylide, which have been reacted with several dipolarophiles such as N- benzylmaleimide and methyl acrylate. Both N-substituted and N-unsubstituted α- amino acids have been used as the amine component. 3-Methyleneoxindole acetic acid ethyl ester was reacted with p- toluenesulfonylmethyl isocyanide (TosMIC) under basic conditions which gave (in a high yield) a colourless product. Two possible structures could be deduced from the analytical data, a pyrroloquinolone and an isomeric ß-carboline. To clarify which one of the alternatives that was actually formed from the TosMIC reaction both the ß- carboline and the pyrroloquinolone were synthesised. The ß-carboline was obtained when 3-ethoxycarbonylmethyl-1H-indole-2-carboxylic acid ethyl ester was treated with a tosylimine. An alternative synthesis of the pyrroloquinolone was performed via a reduction of a 2,3,4-trisubstituted pyrrole obtained in turn by treatment of a vinyl sulfone with ethyl isocyanoacetate under basic conditions. -
Visible Light Photoredox Catalysis with Transition Metal Complexes: Application in Organic Synthesis
Visible Light Photoredox Catalysis with Transition Metal Complexes: Application in Organic Synthesis Penghao Chen Dong Group Seminar April, 10th, 2013 Introduction Kalyanasundaram, K. Coord. Chem. Rev. 1982, 46, 159 Introduction Stern‐Volmer Relationship Turro, N. J. Modern Molecular Photochemistry; Benjamin/Cummings: Menlo Park, CA, 1978. Stoichiometric Net Reductive Reactionreductant1. Reduction is required of Electron Poor Olefin O Bn NH2 2 Pac, C. et. al., J. Am. Chem. Soc. 1981, 103, 6495 Net Reductive Reaction 2. Reductive Dehalogenation Fukuzumi, S. et. al., J. Phys. Chem. 1990, 94, 722. Net Reductive Reaction 2. Reductive Dehalogenation Stephenson, C. R. J. et. al., J. Am. Chem. Soc. 2009, 131, 8756. Stephenson, C. R. J. et. al., Nature Chem. 2012, 4, 854 Net Reductive Reaction 3. Radical Cyclization Stephenson, C. R. J. et. al., Chem. Commun. 2010, 46, 4985 Stephenson, C. R. J. et. al., Nature Chem. 2012, 4, 854 Net Reductive Reaction 4. Epoxide and Aziridine Opening Fensterbank, L. et. al., Angew. Chem., Int. Ed. 2011, 50, 4463 Hasegawa, E. et. al., Tetrahedron 2006, 62, 6581 Guindon, Y. et. al., Synlett 1998, 213 Guindon, Y. et. al., Synlett 1995, 449 Net Oxidative Reaction 1. Functional Group Reactions Cano‐Yelo, H.; Deronzier, A. Tetrahedron Lett. 1984, 25, 5517 Net Oxidative Reaction 1. Functional Group Reactions Jiao, N. et. al., Org. Lett. 2011, 13, 2168 Net Oxidative Reaction 1. Functional Group Reactions Jørgensen, K. A.; Xiao, W.‐J. Angew. Chem., Int. Ed. 2012, 51, 784 Net Oxidative Reaction 2. Oxid. Generation of Iminium Ions Stephenson, C. R. J. et. al., J. Am. Chem. Soc. 2010, 132, 1464 Net Oxidative Reaction 2. -
Priya Mathew
PROGRESS TOWARDS THE TOTAL SYNTHESIS OF MITOMYCIN C By Priya Ann Mathew Dissertation Submitted to the Faculty of the Graduate School of Vanderbilt University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY in Chemistry August, 2012 Nashville, Tennessee Approved: Professor Jeffrey N. Johnston Professor Brian O. Bachmann Professor Ned A. Porter Professor Carmelo J. Rizzo ACKNOWLEDGMENTS I would like to express my gratitude to everyone who made my graduate career a success. Firstly, I would like to thank my advisor, Professor Jeffrey Johnston, for his dedication to his students. He has always held us to the highest standards and he does everything he can to ensure our success. During the challenges we faced in this project, he has exemplified the true spirit of research, and I am especially grateful to him for having faith in my abilities even when I did not. I would like to acknowledge all the past and present members of the Johnston group for their intellectual discussion and their companionship. In particular, I would like to thank Aroop Chandra and Julie Pigza for their incredible support and guidance during my first few months in graduate school, Jayasree Srinivasan who worked on mitomycin C before me, and Anand Singh whose single comment “A bromine is as good as a carbon!” triggered the investigations detailed in section 2.6. I would also like to thank the other members of the group for their camaraderie, including Jessica Shackleford and Amanda Doody for their friendship, Hubert Muchalski for everything related to vacuum pumps and computers, Michael Danneman and Ken Schwieter for always making me laugh, and Matt Leighty and Ki Bum Hong for their useful feedback. -
Synthesis of Y,Δ-Unsaturated Amino Acids by Claisen Rearrangement - Last 25 Years
The Free Internet Journal Review for Organic Chemistry Archive for Arkivoc 2021, part ii, 0-0 Organic Chemistry to be inserted by editorial office Synthesis of y,δ-unsaturated amino acids by Claisen rearrangement - last 25 years Monika Bilska-Markowska,a Marcin Kaźmierczak,*a,b and Henryk Koroniaka aFaculty of Chemistry, Adam Mickiewicz University in Poznań, Uniwersytetu Poznańskiego 8, 61-614 Poznań, Poland bCentre for Advanced Technologies, Adam Mickiewicz University in Poznań, Uniwersytetu Poznańskiego 10, 61-614 Poznań, Poland Email: [email protected] In dedication to Professor Zbigniew Czarnocki on the occasion of his 66th anniversary Received mm-dd-yyyy Accepted mm-dd-yyyy Published on line mm-dd-yyyy Dates to be inserted by editorial office Abstract This mini review summarizes achievements in the synthesis of y,δ-unsaturated amino acids via Claisen rearrangements. The multitude of products that can be obtained using the discussed protocol shows that it is one of the most important reactions in organic synthesis. Moreover, many Claisen rearrangement products are building blocks in the synthesis of more complex molecules with potential biological activity. Keywords: y,δ-Unsaturated amino acids, Claisen rearrangement, fluorine-containing γ,δ-unsaturated amino acids, diastereoselectivity, optically active compounds DOI: https://doi.org/10.24820/ark.5550190.p011.335 Page 1 ©AUTHOR(S) Arkivoc 2021, ii, 0-0 Bilska-Markowska, M. et al. Table of Contents 1. Introduction 2. Chelated Claisen Rearrangement 3. Related Versions of Claisen Rearrangement for γ,δ-Unsaturated Amino Acids 4. Application of Claisen Rearrangement to the Synthesis of Fluorine-containing γ,δ-Unsaturated Amino Acids 5. -
Diversity-Oriented Combinatorial Biosynthesis of Benzenediol Lactone Scaffolds by Subunit Shuffling of Fungal Polyketide Synthases
Diversity-oriented combinatorial biosynthesis of benzenediol lactone scaffolds by subunit shuffling of fungal polyketide synthases Yuquan Xua,b,1, Tong Zhouc,1, Shuwei Zhangc, Patricia Espinosa-Artilesb, Luoyi Wangc, Wei Zhanga, Min Lina, A. A. Leslie Gunatilakab,d, Jixun Zhanc,2, and István Molnárb,d,2 aBiotechnology Research Institute, The Chinese Academy of Agricultural Sciences, Beijing 100081, P. R. China; bNatural Products Center, School of Natural Resources and the Environment, University of Arizona, Tucson, AZ 85706; cDepartment of Biological Engineering, Utah State University, Logan, UT 84322; and dBio5 Institute, University of Arizona, Tucson, AZ 85721 Edited by Jerrold Meinwald, Cornell University, Ithaca, NY, and approved June 23, 2014 (received for review April 16, 2014) Combinatorial biosynthesis aspires to exploit the promiscuity of biosynthesis inhibitory activities in animals. 10,11-dehydrocurvularin microbial anabolic pathways to engineer the synthesis of new (7;Fig.1)isaDALwitha12-memberedring(DAL12)that chemical entities. Fungal benzenediol lactone (BDL) polyketides modulates the heat shock response and the immune system (8, 9). are important pharmacophores with wide-ranging bioactivities, BDL scaffolds are biosynthesized by pairs of collaborating, including heat shock response and immune system modulatory sequentially acting iterative polyketide synthases (iPKSs) (3) – effects. Their biosynthesis on a pair of sequentially acting iterative forming quasi-modular BDL synthases (BDLSs) (Fig. 1) (11 14). polyketide synthases (iPKSs) offers a test case for the modulariza- Each of the BDLS subunits catalyze recursive, decarboxylative tion of secondary metabolic pathways into “build–couple–pair” Claisen condensations of malonyl-CoA using a single core set of ketoacyl synthase (KS), acyl transferase (AT), and acyl carrier combinatorial synthetic schemes. -
Experiment 19 — Aldol Condensation
Chem 22 Spring 2010 Experiment 19 — Aldol Condensation _____________________________________________________________________________ Pre-lab preparation. (1) Write the mechanism of the base-catalyzed aldol condensation of acetone and a generalized aromatic aldehyde, Ar–CH=O to give the α,β-unsaturated product (i.e. the reaction at the top of the next page, but with a 1:1 ratio of ketone and aldehyde). Remember that dehydration in this case occurs under basic conditions, so it can't start with protonation of the hydroxyl group. Nor can it go via an E2 pathway. (2) Draw the structures of all the possible aldehyde and ketone reactants (not the 25 possible condensation products!). (3) The new CC double bonds of the condensation products are E rather than Z, as shown in the acetone example. Why? (4) What's the purpose of rinsing the crude product with dilute acetic acid, followed by ethanol? (5) What is the procedure for carrying out a single-solvent recrystallization? Write this out in detail. The aldol condensation has historically been one of the favorite tools in the synthetic organic chemist's repertoire because of its versatility in forming new CC bonds. Since its discovery in the 1870s the aldol condensation has been use extensively in the synthesis of natural products and other complex molecules. In a typical base-catalyzed aldol condensation an enolate ion attacks the carbonyl group of an aldehyde or ketone. This carbonyl addition produces a β-hydroxy carbonyl compound. In many cases the initially formed condensation product undergoes an "E1cB" dehydration to produce an α,β-unsaturated carbonyl compound as the final product. -
Aldol Condensation- Aldehyde (Or Ketone) Enolate Condenses with Aldehyde (Or Ketone)
Chem 232 Summary of Alpha Substitutions page 1 Aldol Condensation- aldehyde (or ketone) enolate condenses with aldehyde (or ketone): O CH O O H 3 H CH 3 CH3 C C C C CH C C CH2 CH2 H -H O H H O OH 2 H nucleophile electrophile -hydroxy aldehyde -unsaturated aldehyde The nucleophile can be a ketone enolate or aldehyde enolate and the electrophile (shaded) can be an aldehyde or ketone. Crossed Aldol- Condensation between two different carbonyls. The component without hydrogens is the electrophile: O O O OH O C CH C C CH CH3 C H CH -H2O CH 2 CH3 H 3 ketone enolate no -hydrogens -unsaturated ketone Aldol Cyclizations- A dicarbonyl produces an enolate and carbonyl in the same molecule: enolate from a O OH 1,5-diketone CH OH 3 CH3 O O -H2O O CH2 CH3 CH3 CH2 O Claisen Condensation- Similar to Aldol condensation except the nucleophile is an ester enolate; O O O O O O + EtO C CH C OEt EtO C CH2 C EtO C CH2 CH3 C OEt 2 ketoester CH3 CH3 Dieckmann Cyclization- Internal Claisen condensation similar to Aldol cyclization. A 1,6 diester gives a 5-membered ring and a 1,7 diester gives a 6-membered ring: O OEt O OEt cyclic ketoester C C OEt O O Crossed Claisen- Similar to crossed Aldol- Electrophile has nohydrogens: O O O O C C EtO EtO C CH2 EtO C CH2 ketoester Variations on Crossed Claisen- ketone enolate and ester condensation. Esters, carbonates, formates and oxalates are common electrophiles: O O O O O O O O H C OEt H EtO C OEt OEt ethyl formate -ketoaldehyde diethyl carbonate -ketoester O O O O O OEt diketoester EtO C C OEt O diethyl oxalate -
Ring Opening of Donor–Acceptor Cyclopropanes with N-Nucleo- Philes
SYNTHESIS0039-78811437-210X © Georg Thieme Verlag Stuttgart · New York 2017, 49, 3035–3068 short review 3035 en Syn thesis E. M. Budynina et al. Short Review Ring Opening of Donor–Acceptor Cyclopropanes with N-Nucleo- philes Ekaterina M. Budynina* Konstantin L. Ivanov Ivan D. Sorokin Mikhail Ya. Melnikov Lomonosov Moscow State University, Department of Chemistry, Leninskie gory 1-3, Moscow 119991, Russian Federation [email protected] Received: 06.02.2017 Accepted after revision: 07.04.2017 Published online: 18.05.2017 DOI: 10.1055/s-0036-1589021; Art ID: ss-2017-z0077-sr Abstract Ring opening of donor–acceptor cyclopropanes with various N-nucleophiles provides a simple approach to 1,3-functionalized com- pounds that are useful building blocks in organic synthesis, especially in assembling various N-heterocycles, including natural products. In this review, ring-opening reactions of donor–acceptor cyclopropanes with amines, amides, hydrazines, N-heterocycles, nitriles, and the azide ion are summarized. 1 Introduction 2 Ring Opening with Amines Ekaterina M. Budynina studied chemistry at Lomonosov Moscow 3 Ring Opening with Amines Accompanied by Secondary Processes State University (MSU) and received her Diploma in 2001 and Ph.D. in Involving the N-Center 2003. Since 2013, she has been a leading research scientist at Depart- 3.1 Reactions of Cyclopropane-1,1-diesters with Primary and Secondary ment of Chemistry MSU, focusing on the reactivity of activated cyclo- Amines propanes towards various nucleophilic agents, as well as in reactions -
Catalyzed Claisen Rearrangement of Allenyl Vinyl Ethers: a Synthetic and Mechanistic Approach Kassem M
Florida State University Libraries Electronic Theses, Treatises and Dissertations The Graduate School 2011 Gold (I)-Catalyzed Claisen Rearrangement of Allenyl Vinyl Ethers: A Synthetic and Mechanistic Approach Kassem M. Hallal Follow this and additional works at the FSU Digital Library. For more information, please contact [email protected] THE FLORIDA STATE UNIVERSITY COLLEGE OF ARTS AND SCIENCES GOLD (I)-CATALYZED CLAISEN REARRANGEMENT OF ALLENYL VINYL ETHERS; A SYNTHETIC AND MECHANISTIC APPROACH By KASSEM M. HALLAL A Dissertation submitted to the Department of Chemistry and Biochemistry in partial fulfillment of the requirements for the degree of Doctor of Philosophy Degree Awarded: Spring Semester, 2011 The members of the committee approve the dissertation of Kassem M. Hallal defended on March 18, 2011. _______________________________________ Marie E. Krafft Professor Directing Dissertation _______________________________________ Thomas C. S. Keller III University Representative _______________________________________ Robert A. Holton Committee Member _______________________________________ Gregory B. Dudley Committee Member _______________________________________ William T. Cooper Committee Member Approved: ____________________________________________________________ Joseph B. Schlenoff, Chair, Department of Chemistry and Biochemistry The Graduate School has verified and approved the above-named committee members. ii This work is dedicated To My soul mate, lovely wife zeinab, My baby Mohammad And also to my parents Mohammad & Kamela And to My brothers and lovely sister Youssef, Hamzeh and Fatima & My Great professor Prof. Marie E. Krafft iii ACKNOWLEDGEMENTS Starting my PhD career at Florida State University was one of the most important stages in my life. Throughout the past five years, I learned a lot of things about chemistry and science, however, the most important thing which I learned was the chemistry of life. -
A New Reaction Mechanism of Claisen Rearrangement Induced by Few-Optical-Cycle Pulses: Demonstration of Nonthermal Chemistry by Femtosecond Vibrational Spectroscopy*
Pure Appl. Chem., Vol. 85, No. 10, pp. 1991–2004, 2013. http://dx.doi.org/10.1351/PAC-CON-12-12-01 © 2013 IUPAC, Publication date (Web): 13 August 2013 A new reaction mechanism of Claisen rearrangement induced by few-optical-cycle pulses: Demonstration of nonthermal chemistry by femtosecond vibrational spectroscopy* Izumi Iwakura1,2,3,‡, Atsushi Yabushita4, Jun Liu2, Kotaro Okamura2, Satoko Kezuka5, and Takayoshi Kobayashi2 1Innovative Use of Light and Materials/Life, PRESTO, JST, 4-1-8 Honcho, Kawaguchi, Saitama, 332-0012, Japan; 2University of Electro-Communications, 1-5-1 Chofugaoka, Chofu, Tokyo 182-8585, Japan; 3Faculty of Engineering, Kanagawa University, 3-27-1 Rokkakubashi, Yokohama 221-8686, Japan; 4Department of Electrophysics, National Chiao-Tung University, Hsinchu 300, Taiwan; 5Department of Applied Chemistry, School of Engineering, Tokai University, 1117 Kitakaname, Hiratsuka-shi, Kanagawa 259-1292, Japan Abstract: Time-resolved vibration spectroscopy is the only known way to directly observe reaction processes. In this work, we measure time-resolved vibration spectra of the Claisen rearrangement triggered and observed by few-optical-cycle pulses. Changes in molecular structure during the reaction, including its transition states (TSs), are elucidated by observ- ing the transient changes of molecular vibration wavenumbers. We pump samples with visi- ble ultrashort pulses of shorter duration than the molecular vibration period, and with photon energies much lower than the minimum excitation energy of the sample. The results indicate that the “nonthermal Claisen rearrangement” can be triggered by visible few-optical-cycle pulses exciting molecular vibrations in the electronic ground state of the sample, which replaces the typical thermal Claisen rearrangement. -
Aldol Condensation
Chemistry 212 Laboratory Dibenzalacetone via Crossed Aldol Condensation Prelab: Calculate the amounts of all chemicals needed in measurable amounts (i.e. grams or milliliters rather than moles.) Introduction: Aldol condensations are important in organic synthesis, providing a good way to form carbon–carbon bonds. The "aldol" (aldehyde + alcohol) product is a structural unit found in many naturally occurring molecules and pharmaceuticals, and is therefore important. In an Aldol condensation an enolate ion reacts with a carbonyl compound to form a β- hydroxyaldehyde or β-hydroxyketone, followed by dehydration to give a conjugated enone. The general equation is shown in Figure 1. O O O R" B: H R R'" R "R R'" loss of H2O H R' R' Figure 1. The equation for the Aldol Condensation. The reaction involves the nucleophilic addition of an enolate to an aldehyde to form a β-hydroxy carbonyl. The β-hydroxy carbonyl is readily dehydrated under mild conditions. The aldol reaction occurs under both acidic and basic conditions as seen in Figure 2. ENOL pathway (reacts in H O protonated OH form) O O catalytic H+ O O H H R' H2O lost R' R R R' R R H aldol addition product aldol condensation product ENOLATE pathway O O M O M O base O H R' R R' R R enolate H Figure 2. The Aldol reaction and subsequent dehydration under acidic and basic conditions. The reaction we will be doing this week involves the reaction between benzaldehyde and acetone to do a double Aldol Condensation. The overall equation is shown in Figure 3.