Organocatalysis by N-Heterocyclic Carbenes
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Sep. 5, Hydroacylation by Brandon Reinus
Hydroacylation and Related Topics Dong Group Seminar Brandon Reinus Wed, Sept. 5th 2012 Why? ¡ Looking at the reaction, it is a highly atom- economical approach to synthesizing ketones ¡ Umpolung (ex: deprotonating dithioacetals) ¡ Using acrylate derivatives generates a 1,4 diketone relationship, a hard relationship to establish using classical organic synthesis. Presentation Overview 1. Hydroformylation (extremely brief) 2. Rh-Catalyzed Hydroacylation ¡ Intramolecular ¡ Intermolecular ¡ Other 3. NHC Catalyzed Hydroacylation ¡ Benzoin reaction ¡ Stetter reaction ¡ other Part 1 : Background Reppe Roelen Science of Synthesis, Stereoselective Synthesis 1, 2011, pg.409 Hydroformylation Metal-Organic Cooperative Catalysis Park et al. Introduction SCHEME 2 Among the many elegant examples of transition metal cat- alyzed activation of C-HandC-Cbonds,1 chelation-as- sisted protocols have recently attracted increasing attention in organometallic chemistry. Directed metalation processes have been demonstrated by valuable applications in organic synthesis, showing remarkable efficiency and chemoselectivity.2 In general, a chelation-assisted proto- col facilitates the formation of either the kinetically or ther- modynamically favored five- or six-membered metallacycle; aprepositionedcoordinatinggroupinducesspatialproxim- ing decarbonylation, their structures are too specific to apply ity between the C-HorC-Cbondsandthetransitionmetal for common aldehydes. center.1,2 Despite the magnificent usefulness in activating otherwise stable C-HandC-Cbonds,amajordrawbackof -
Benzoin and Stobbe Reactions
____________________________________________________________________________________________________ Subject Chemistry Paper No and Title 9; Organic Chemistry-III (Reaction Mechanism-2) Module No and Title 21; Named Reactions: Benzoin Condensation and Stobbe Condensation Module Tag CHE_P9_M21 CHEMISTRY Paper 9: Organic Chemistry-III (Reaction Mechanism-2) Module NO. 21: Benzoin Condensation and Stobbe Condensation ____________________________________________________________________________________________________ TABLE OF CONTENTS 1. Learning Outcomes 2. Introduction 3. Benzoin Condensation 3.1 Mechanism of Benzoin Condensation 3.2 Characteristics of Benzoin Condensation 3.3 Reactions of Benzoin 4. Stobbe Condensation 4.1 Mechanism of Stobbe Condensation 4.2 Characteristics of Stobbe Condensation 4.3 Few Examples of Stobbe Condensation 5. Summary CHEMISTRY Paper 9: Organic Chemistry-III (Reaction Mechanism-2) Module NO. 21: Benzoin Condensation and Stobbe Condensation ____________________________________________________________________________________________________ 1. Learning Outcomes After studying this module, you shall be able to: Know what are Benzoin condensation and Stobbe condensation reactions Learn mechanism of Benzoin and Stobbe condensation reactions Know about the role of CN- ion in Benzoin condensation Identify the products of reduction and oxidation of Benzoin condensation Understand the product formation in Benzoin and Stobbe condensation. 2. Introduction A condensation reaction, also commonly referred to as dehydration -
Benzoin Condensation
GENERAL ARTICLE Benzoin Condensation The Cyanide Connection with Tapioca and Vitamin B1 Gopalpur Nagendrappa Benzoin condensation is an important carbon–carbon bond forming reaction. It is achieved by generating an acyl anion equivalent from one aldehyde molecule which adds to a second aldehyde molecule. The reaction is traditionally catalysed by a cyanide ion. Cyanohydrin anion is the first intermediateandistheprecursortotheacylanionequivalent. G Nagendrappa, retired Cyanohydrins are found in plants as glycosides. A reaction from Bangalore Univer- completely analogous to benzoin condensation occurs in our sity, Bangalore, is body, which however neither involves cyanohydrin interme- presently Professor and diate nor is catalysed by cyanide ion. It is catalysed by the Head of the Department of Medicinal Chemistry, Sri thiazolium moiety of the co-enzyme thiamine pyrophosphate Ramachandra University, (TPP). This article shows the common links and inclusive Porur, Chennai. His main chemistry aspects among cyanohydrin formation, naturally work is in the areas of occurring cyanohydrins, conversion of cyanohydrins to ben- organosilicon chemistry, organic synthesis, reaction zoins/acyloins, the role of vitamin B1 (thiamine) andthe use of mechanism and synthetic thiazolium compounds in benzoin/acyloin condensation. methodologies. Introduction Cyano Group in Natural Products 1. Cyanoglycosides Hydrogen cyanide is a deadly poisonous substance. A variety of plants produce it, though in the hidden form of cyanoglycosides, the sugar derivatives of cyanohydrins. Cyanohydrins are formally the products of HCN addition to ketones or aldehydes, the addi- Keywords tion being reversible. Cyanoglycosides hydrolyse enzymatically Benzoin condensation, acyloin as well as nonenzymatically in the body to sugar and cyanohy- condensation, cyanoglycosides, cyanohydrins, vitamin B cataly- drins, which release hydrogen cyanide, Scheme 1. -
Synthesis and Bioactivity of Analogues of the Marine Antibiotic Tropodithietic Acid
Synthesis and bioactivity of analogues of the marine antibiotic tropodithietic acid Patrick Rabe1, Tim A. Klapschinski1, Nelson L. Brock1, Christian A. Citron1, Paul D’Alvise2, Lone Gram2 and Jeroen S. Dickschat*1 Letter Open Access Address: Beilstein J. Org. Chem. 2014, 10, 1796–1801. 1Kekulé-Institut für Organische Chemie, Rheinische doi:10.3762/bjoc.10.188 Friedrich-Wilhelms-Universität Bonn, Gerhard-Domagk-Straße 1, 53121 Bonn, Germany and 2Department of Systems Biology, Received: 17 April 2014 Technical University of Denmark, Matematiktorvet bldg. 301, 2800 Accepted: 22 July 2014 Kongens Lyngby, Denmark Published: 06 August 2014 Email: This article is part of the Thematic Series "Natural products in synthesis Jeroen S. Dickschat* - [email protected] and biosynthesis". * Corresponding author Associate Editor: K. N. Ganesh Keywords: © 2014 Rabe et al; licensee Beilstein-Institut. antibiotics; natural products; Roseobacter; SAR study; tropodithietic License and terms: see end of document. acid; tropone Abstract Tropodithietic acid (TDA) is a structurally unique sulfur-containing antibiotic from the Roseobacter clade bacterium Phaeobacter inhibens DSM 17395 and a few other related species. We have synthesised several structural analogues of TDA and used them in bioactivity tests against Staphylococcus aureus and Vibrio anguillarum for a structure–activity relationship (SAR) study, revealing that the sulfur-free analogue of TDA, tropone-2-carboxylic acid, has an antibiotic activity that is even stronger than the bioactivity of the natural product. The synthesis of this compound and of several analogues is presented and the bioactivity of the synthetic compounds is discussed. Introduction Tropodithietic acid (TDA, 1a) is an antibiotic produced by the that are located on a plasmid [6,7], and the adjacent paaZ2 gene marine bacterium Phaeobacter inhibens. -
CHEM 33 Unless You Have Completed the Laboratory and Turned in a Notebook, So Be Sure to Turn in Your Notebook on Time to Your Laboratory Instructor
SANTA CLARA UNIVERSITY SUMMER TERM 2019 ORGANIC CHEMISTRY III CHEMISTRY 33L LABORATORY SYLLABUS INSTRUCTORS Raymond Gipson, Ph.D.; Beatrice Ruhland, Ph.D. TIMES • Monday/Wednesday: 8:00-12:30 p.m. • Monday/Wednesday: 4:30-9:00 p.m. • Tuesday/Thursday: 8:00-12:30 p.m. • Tuesday/Thursday: 4:30-9:00 p.m. Laboratories begin on Monday, July 29th and are held in DS 126 MATERIALS 1. Course syllabus (available on Canvas, Chem33 lab course page or on google sites https://sites.google.com/a/scu.edu/organic-chemistry-laboratory/, and from Copy Craft Printing, 341 Lafayette St.) 2. Laboratory Techniques in Organic Chemistry by Mohrig, Alberg, Hofmeister, Schatz and Hammond, 4th Edition 3. Bound laboratory notebook embossed with "Santa Clara University", Scientific Notebook Company (available from the bookstore); you may use the same notebook as you purchasEd for Chem32L 4. Safety splash goggles 5. Laboratory coat (available from the bookstore) LABORATORY GUIDELINES 1. The laboratory in Daly Science 100 were modernized and redesigned in 1994, with safety as the primary concern. The main improvement in these laboratories was increasing the number of hoods so that each student has a workstation in a hood, two students per hood. This significant enhancement in safety protects everyone because many organic compounds are volatile and using a hood minimizes your exposure to fumes. Therefore, virtually 100% of your chemical work should be performed in a fume hood. 2. To do organic chemistry safely, you should treat all chemicals with respect; glovEs should be worn unless otherwise directed by the instructor. 3. -
United States Patent (10) Patent No.: US 8,329,217 B2 Vergezz
US008329217B2 (12) United States Patent (10) Patent No.: US 8,329,217 B2 VergezZ. et all e 45) Date of Patent:e Dec.e 11, 2012 (54) DUAL CONTROLLED RELEASE DOSAGE 5, 190,765 A 3, 1993 Jao et al. FORM 5,208,037 A 5/1993 Wright et al. 5,252.338 A 10, 1993 Jao et al. 5,399,359 A 3, 1995 Baichwal (75) Inventors: Juan A. Vergez, Buenos Aires (AR): 5,543,155 A 8, 1996 Fekete et al. Marcelo A. Ricci, Buenos Aires (AR) 5,674,895 A 10/1997 Guittard et al. 5,788,987 A 8, 1998 Busetti et al. (73) Assignee: Osmotica Kereskedelmi es Szolgaltato 5,840,754. A 1 1/1998 Guittard et al. Kft, Budapest (HU) 5,866,164 A 2/1999 Kuczynski et al. s 5,912,268 A 6/1999 Guittard et al. 6,106,864 A 8, 2000 Dolan et al. (*) Notice: Subject to any disclaimer, the term of this 6,207,191 B1* 3/2001 Crison et al. .................. 424,472 patent is extended or adjusted under 35 2002/0010216 A1 1/2002 Rogosky et al. U.S.C. 154(b) by 1407 days. 2006/0177510 A1 8/2006 Vergez (21) Appl. No.: 11/355,315 FOREIGN PATENT DOCUMENTS y x- - - 9 JP 2646170 8, 1997 JP 2665858 10, 1997 (22) Filed: Feb. 15, 2006 WO 96.12477 5, 1996 WO 97.18814 5, 1997 (65) Prior Publication Data WO OOf 12069 3, 2000 WO OOf 18997 4/2000 US 2006/0204578 A1 Sep. 14, 2006 WO WOO1/51036 * 7/2OO1 Related U.S. -
Mechanisms and Uses of Aldol Condensations
Mechanisms and Uses of Aldol Condensations Tom Crowley Missouri Western State University CHE 445 Advanced Topics in Chemistry Advanced Organic Dr. Steven P. Lorimor 4-5-2007 Aldol condensations form a very important class of reactions in organic synthesis. The reaction was discovered independently by Charles-Adolph Wurtz and Alexander Porfyrevich Borodin in 1872. The name aldol was chosen because the product of an aldol condensation often contains an aldehyde and an alcohol group. Aldol condensations are extremely important in pharmaceuticals, used in the production of Lipitor, the immunosuppressant FK506, tetracycline antibiotics, and the antifungal agent Amphotericin B. Aldol condensations are also very important in biological processes, the breakdown of glucose in cells through glycolysis uses enzyme catalyzed aldol reactions.1 In general, an aldol condensation is the attack of a nucleophile on a carbonyl to make a β-hydroxy ketone or aldehyde. Usually the nucleophile is an enolate of an aldehyde or ketone that attacks another molecule of the aldehyde or ketone. The aldol condensation can be catalyzed by either an acidic or basic solution. The mechanism for the aldol condensation is as follows:2 Acid catalyzed aldol condensation Base catalyzed aldol condensation. Ketones are harder to use in aldol condensations, they usually produce much smaller yields than aldehydes. 2 Aldol condensations are reversible, forming equilibria. To drive an aldol reaction to completion, dehydration is used to remove the aldol product from the reaction. The dehydration can also be carried out by acidic or basic solutions. Prior to the development of the Wittig reaction, an aldol condensation followed by dehydration was the best way to link two molecules by a carbon-carbon double bond. -
Dissertation Enantioselective Β
DISSERTATION ENANTIOSELECTIVE β-FUNCTIONALIZATION OF ENALS VIA N-HETEROCYCLIC CARBENE CATALYSIS Submitted by Nicholas Andrew White Department of Chemistry In partial fulfillment of the requirements For the Degree of Doctor of Philosophy Colorado State University Fort Collins, Colorado Fall 2015 Doctoral Committee: Advisor: Tomislav Rovis Alan J. Kennan Eugene Y.-X. Chen Robert M. Williams Matt J. Kipper Copyright by Nicholas Andrew White 2015 All Rights Reserved ABSTRACT ENANTIOSELECTIVE β-FUNCTIONALIZATION OF ENALS VIA N-HETEROCYCLIC CARBENE CATALYSIS A series of δ-nitroesters were synthesized through the N-heterocyclic carbene catalyzed coupling of enals and nitroalkenes. The asymmetric coupling of these substrates via the homoenolate pathway afford δ-nitroesters in good yield, diastereoselectivity, and enantioselectivity. This methodology allows for the rapid synthesis of δ-lactams. Using this approach, we synthesized the pharmaceutically relevant piperidines paroxetine and femoxetine. A novel single-electron oxidation pathway for the N-heterocyclic carbene generated Breslow intermediate has been developed. Nitroarenes have been shown to transfer an oxygen from the nitro group to the β-position of an enal in an asymmetric fashion to generate β-hydroxy esters. This reaction affords desired β-hydroxy ester products in good yield and enantioselectivity and tolerates a wide range of enal substrates. A dimerization of aromatic enals to form 3,4-disubstituted cyclopentanones has been investigated. Using a single-electron oxidant, aromatic enals couple to form cyclopenanone products in good yield, good enantioselectivity, and excellent diastereoselectivity. A cross coupling has also been developed to afford non-symmetrical cyclopentanone products. ii ACKNOWLEDGEMENTS First, and foremost, I would like to thank my advisor, Professor Tomislav Rovis for his supervision and guidance over the past five years. -
Resonance Energies of Some Compounds Containing Nitrogen Or Oxygen
Reprint from Theoret. chim. Ada (Beri.) 17, 235—238 (1970) Springer-Verlag Berlin ■ Heidelberg ■ New York © by Springer- Verlag ■ Printed in Germany Resonance Energies of Some Compounds Containing Nitrogen or Oxygen M ic h a e l J. S. D e w a r and N. T r in a jst io Theoret. chim. Acta(Berl.) 17,235— 238(1970) Resonance Energies of Some Compounds Containing Nitrogen or Oxygen* Michael J. S. Dewar and N. Trinajstić** University of Texas, Department of Chemistry, Austin, Texas 78712, USA Received February 9, 1970 Resonance energies are calculated for a number of aromatic, and potentially aromatic, compounds containing nitrogen or oxygen, using a recent version of our SCF MO n approximation. Recently we reported [1] a variant of our earlier SCF MO n approximation [2—5] in which the one-electron resonance integral (/?£)) is determined from the Mulliken relation instead of the Devvar-Schmeising thermocycle [6, 7]; i.e. fij = K S tj ( 1) where K is a constant characteristic of the atoms i and j. This procedure avoids a difficulty inherent in the earlier treatment, i.e. the need for data concerning “pure” double bonds. Such data are available only for bonds formed by carbon, nitrogen, and oxygen; the thermocycle approach could not therefore be extended to other elements. One important conclusion from the earlier papers was that bonds in classical polyenes [3, 4], and in classical conjugated compounds containing nitrogen or oxygen [8], are localized, in the sense that the calculated heats of atomization can be expressed as sums of “polyene” bond energies that carry over from one molecule to another. -
Synthesis and Bioactivity of Analogues of the Marine Antibiotic Tropodithietic Acid
Downloaded from orbit.dtu.dk on: Oct 05, 2021 Synthesis and bioactivity of analogues of the marine antibiotic tropodithietic acid Rabe, Patrick; Klapschinski, Tim A.; Brock, Nelson L.; Citron, Christian A.; D'Alvise, Paul; Gram, Lone; Dickschat, Jeroen S. Published in: Beilstein Journal of Organic Chemistry Link to article, DOI: 10.3762/bjoc.10.188 Publication date: 2014 Document Version Publisher's PDF, also known as Version of record Link back to DTU Orbit Citation (APA): Rabe, P., Klapschinski, T. A., Brock, N. L., Citron, C. A., D'Alvise, P., Gram, L., & Dickschat, J. S. (2014). Synthesis and bioactivity of analogues of the marine antibiotic tropodithietic acid. Beilstein Journal of Organic Chemistry, 10, 1796-1801. https://doi.org/10.3762/bjoc.10.188 General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. Users may download and print one copy of any publication from the public portal for the purpose of private study or research. You may not further distribute the material or use it for any profit-making activity or commercial gain You may freely distribute the URL identifying the publication in the public portal If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. Synthesis and bioactivity of analogues of the marine antibiotic tropodithietic acid Patrick Rabe1, Tim A. -
Computational Studies of the Tropone Natural Products, Thiotropocin
Computational Studies of the Tropone Natural SCHEME 1 Products, Thiotropocin, Tropodithietic Acid, and Troposulfenin. Significance of Thiocarbonyl-Enol Tautomerism Edyta M. Greer,†,1 David Aebisher,† Alexander Greer,*,† and Ronald Bentley*,‡ Department of Chemistry and Graduate Center & The City UniVersity of New York (CUNY), Brooklyn College, Brooklyn, New York 11210, and Department of Biological Sciences, UniVersity of Pittsburgh, Pittsburgh, PennsylVania 15260 [email protected]; [email protected] ReceiVed August 22, 2007 viability of 1-3.2-16 To take an example, in 2005, an antibiotic substance was described imprecisely as “the sulfur containing compound thiotropocin or tropodithietic acid produced by Roseobacter strain 27-4...”.10 In 2006, Laatsch16 cited unpub- lished work suggesting that previous structural assignments of 1 and 32-15 were incorrect and that they should instead be 2.16 The X-ray structure has been obtained for 2,8 although Cane provided evidence for the detection of 1 from 13C-labeling 12 experiments in DMSO and CDCl3 solution. One problem is that it is unclear whether 1-3 rearrange with - Computations provide insight to the stability and isomeric each other in solution. Compounds 1 3 can be regarded as possibilities of thiotropocin, tropodithietic acid, and tropo- tautomers and may possess dynamic behavior, possibly influ- enced by solvent proticity and pH. However, no spectroscopic sulfenin. Thiotropocin and tropodithietic acid contain a flat evidence exists for the conjugate base. No previous study 7-membered ring and delocalized π-bonds similar to those + postulated a role of the conjugate base 4 in the equilibration of of tropylium ion (C7H7 ). Troposulfenin is far less stable; it 1-3. -
US 2006/0233859 A1 Whitcup Et Al
US 20060233859A1 (19) United States (12) Patent Application Publication (10) Pub. No.: US 2006/0233859 A1 Whitcup et al. (43) Pub. Date: Oct. 19, 2006 (54) METHODS FOR TREATING RETINOPATHY Related U.S. Application Data WITH EXTENDED THERAPEUTIC EFFECT (63) Continuation-in-part of application No. 10/837,357, (75) Inventors: Scott M. Whitcup, Laguna Hills, CA filed on Apr. 30, 2004. (US); David A. Weber, Danville, CA (US) Publication Classification Correspondence Address: (51) Int. Cl. ALLERGAN, INC., LEGAL DEPARTMENT A 6LX 3/573 (2006.01) 2525 DUPONT DRIVE, T2-7H A6F 2/00 (2006.01) IRVINE, CA 92.612-1599 (US) (52) U.S. Cl. ............................................ 424/427: 514/179 (73) Assignee: Allergan, Inc., Irvine, CA (57) ABSTRACT (21) Appl. No.: 11/292,544 Methods for treating and preventing retinopathic conditions by administering a glucocorticoid to the vitreous chamber of (22) Filed: Dec. 2, 2005 a patient at risk of, or Suffering from, the retinopathy. Patent Application Publication Oct. 19, 2006 Sheet 1 of 3 US 2006/0233859 A1 FIGURE 1 Vitreous Humor Concentrations of Dexamethasone in Treated Eye: Comparison of all Dose Levels and Dosage Forms 10000 an(0am-350T OOO - an a 700T 5 100 XC - - - Quantification Limit 0.35OE 10 - a 700E Hours FIGURE 2 Percent of Dexamethasone Released from DEXPS DDS over Time for all Dose Levels and Dosage Forms 60 50 40 - : 30 4 S. 20 10 O Hours Patent Application Publication Oct. 19, 2006 Sheet 2 of 3 US 2006/0233859 A1 FIGURE 3 Vitreous Humor Concentrations of Dexamethasone in Treated Eye: Comparison of all Dose Levels and Dosage Forms - - - Quantification Limit sm 700E Days FIGURE 4 Percent of Dexamethasone Released from DEX PS DDS Over Time for all Dose Levels and Dosage Forms Days Patent Application Publication Oct.