Mushroom and Macrofungi Collection for Screening Bioactivity of Some Species to Inhibit Coffee Antharcnose Caused by Colletotrichum Coffeanum
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Genome Sequence Analysis of Auricularia Heimuer Combined with Genetic Linkage Map
Journal of Fungi Article Genome Sequence Analysis of Auricularia heimuer Combined with Genetic Linkage Map Ming Fang 1, Xiaoe Wang 2, Ying Chen 2, Peng Wang 2, Lixin Lu 2, Jia Lu 2, Fangjie Yao 1,2,* and Youmin Zhang 1,* 1 Lab of genetic breeding of edible mushromm, Horticultural, College of Horticulture, Jilin Agricultural University, Changchun 130118, China; [email protected] 2 Engineering Research Centre of Chinese Ministry of Education for Edible and Medicinal Fungi, Jilin Agricultural University, Changchun 130118, China; [email protected] (X.W.); [email protected] (Y.C.); [email protected] (P.W.); [email protected] (L.L.); [email protected] (J.L.) * Correspondence: [email protected] (F.Y.); [email protected] (Y.Z.) Received: 3 March 2020; Accepted: 12 March 2020; Published: 16 March 2020 Abstract: Auricularia heimuer is one of the most popular edible fungi in China. In this study, the whole genome of A. heimuer was sequenced on the Illumina HiSeq X system and compared with other mushrooms genomes. As a wood-rotting fungus, a total of 509 carbohydrate-active enzymes (CAZymes) were annotated in order to explore its potential capabilities on wood degradation. The glycoside hydrolases (GH) family genes in the A. heimuer genome were more abundant than the genes in the other 11 mushrooms genomes. The A. heimuer genome contained 102 genes encoding class III, IV, and V ethanol dehydrogenases. Evolutionary analysis based on 562 orthologous single-copy genes from 15 mushrooms showed that Auricularia formed an early independent branch of Agaricomycetes. The mating-type locus of A. heimuer was located on linkage group 8 by genetic linkage analysis. -
Studies on Ear Fungus-Auricularia from the Woodland of Nameri National Park, Sonitpur District, Assam
International Journal of Interdisciplinary and Multidisciplinary Studies (IJIMS), 2014, Vol 1, No.5, 262-265. 262 Available online at http://www.ijims.com ISSN: 2348 – 0343 Studies on Ear Fungus-Auricularia from the Woodland of Nameri National Park, Sonitpur District, Assam. M.P. Choudhury1*, Dr.T.C Sarma2 1.Department of Botany, Nowgong College, Nagaon -782001, Assam, India. 2.Department of Botany, Gauhati University,Guwahati-7810 14, Assam, India. *Corresponding author: M.P. Choudhury Abstract Auricularia is the genus of the order Auriculariales with more than 10 species. It is also called ear fungus due to its morphological similarities with human ear and has considerable mythological importance. Auricularia auricula is the type species of the order Auriculariales. Different species of Auricularia are edible and some have medicinal importance and still investigations are going on other species to find out their medicinal properties. Extensive woodland of Nameri National Park provides ideal condition for the growth of different species of Auricularia. In this context the present study has been undertaken to study the taxonomy and diversity of different species of Auricularia and bring together information of its ethenomycological uses. As a result of field and laboratory study four different species of Auricularia were collected of which 3 species were identified and one species remain unidentified. Key Words: Auricularia, Taxonomy, Diversity, Nameri National Park. Introduction Auricularia belongs to the order Auriculariales is the largest genus of jelly fungi. They are among the most common and widely distributed members of macrofungi, which generally occurs as saprophytes on wood, logs, branch and twigs causing severe degrees of white rotting of forest trees. -
Clavulinopsis Helvola (Pers.) Corner, Monograph of Clavaria and Allied Genera (Annals of Botany Memoirs No
© Miguel Ángel Ribes Ripoll [email protected] Condiciones de uso Clavulinopsis helvola (Pers.) Corner, Monograph of Clavaria and allied Genera (Annals of Botany Memoirs No. 1): 372 (1950) COROLOGíA Registro/Herbario Fecha Lugar Hábitat MAR-111009 11 11/10/2009 Colllado de las Tres Cruces, Santa Orosia, En un talud en bosque mixto de Leg.: Fermín Pancorbo, Juan Carlos Campos, Juan Yebra de Basa (Huesca) haya (Fagus sylvatica) y abeto Carlos Zamora, Luis Rubio, Jorge Hernanz, Félix 1528 m 30T YN2510 blanco (Abies alba) Mateo, Eliseo Vernis, Santiago García Det.: Miguel Á. Ribes TAXONOMíA Basiónimo: Clavaria helvola Pers. [as 'helveola'], Comm. fung. clav. (Lipsiae): 69 (1797) Citas en listas publicadas: Index of Fungi 2: 19. Posición en la clasificación: Clavariaceae, Agaricales, Agaricomycetidae, Agaricomycetes, Basidiomycota, Fungi Sinónimos: o Clavaria dissipabilis Britzelm., Ber. naturw. Augsburg 29: 289 (1887) o Clavaria flammans Berk., J. Linn. Soc., Bot. 14(1): 350 (1873) o Clavaria helvola Pers., Comm. fung. clav. (Lipsiae): 69 (1797) subsp. Helvola o Clavaria inaequalis sensu auct.; fide Checklist of Basidiomycota of Great Britain and Ireland (2005) o Clavaria inaequalis var. helvola (Pers.) Fr., Elench. fung. (Greifswald) 1: 232 (1828) o Clavaria similis Boud. & Pat., J. Bot. Morot 2: 406 (1888) o Ramariopsis helvola (Pers.) R.H. Petersen, Mycologia 70(3): 668 (1978) DESCRIPCIÓN MACRO Basidioma filiforme, cilíndrico-claviforme o cilíndrico-aplanado, normalmente sinuoso y no ramificado, pero a veces con una pequeña ramificación en el ápice, a veces ligeramente surcado, hasta de 6-7 cm de alto, de color amarillo-anaranjado vivo o pálido, mate, cubierto por una pruina más clara en ejemplares jóvenes, ápice redondeado que se vuelve pardo al envejecer. -
Appendix K. Survey and Manage Species Persistence Evaluation
Appendix K. Survey and Manage Species Persistence Evaluation Establishment of the 95-foot wide construction corridor and TEWAs would likely remove individuals of H. caeruleus and modify microclimate conditions around individuals that are not removed. The removal of forests and host trees and disturbance to soil could negatively affect H. caeruleus in adjacent areas by removing its habitat, disturbing the roots of host trees, and affecting its mycorrhizal association with the trees, potentially affecting site persistence. Restored portions of the corridor and TEWAs would be dominated by early seral vegetation for approximately 30 years, which would result in long-term changes to habitat conditions. A 30-foot wide portion of the corridor would be maintained in low-growing vegetation for pipeline maintenance and would not provide habitat for the species during the life of the project. Hygrophorus caeruleus is not likely to persist at one of the sites in the project area because of the extent of impacts and the proximity of the recorded observation to the corridor. Hygrophorus caeruleus is likely to persist at the remaining three sites in the project area (MP 168.8 and MP 172.4 (north), and MP 172.5-172.7) because the majority of observations within the sites are more than 90 feet from the corridor, where direct effects are not anticipated and indirect effects are unlikely. The site at MP 168.8 is in a forested area on an east-facing slope, and a paved road occurs through the southeast part of the site. Four out of five observations are more than 90 feet southwest of the corridor and are not likely to be directly or indirectly affected by the PCGP Project based on the distance from the corridor, extent of forests surrounding the observations, and proximity to an existing open corridor (the road), indicating the species is likely resilient to edge- related effects at the site. -
Major Clades of Agaricales: a Multilocus Phylogenetic Overview
Mycologia, 98(6), 2006, pp. 982–995. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 Major clades of Agaricales: a multilocus phylogenetic overview P. Brandon Matheny1 Duur K. Aanen Judd M. Curtis Laboratory of Genetics, Arboretumlaan 4, 6703 BD, Biology Department, Clark University, 950 Main Street, Wageningen, The Netherlands Worcester, Massachusetts, 01610 Matthew DeNitis Vale´rie Hofstetter 127 Harrington Way, Worcester, Massachusetts 01604 Department of Biology, Box 90338, Duke University, Durham, North Carolina 27708 Graciela M. Daniele Instituto Multidisciplinario de Biologı´a Vegetal, M. Catherine Aime CONICET-Universidad Nacional de Co´rdoba, Casilla USDA-ARS, Systematic Botany and Mycology de Correo 495, 5000 Co´rdoba, Argentina Laboratory, Room 304, Building 011A, 10300 Baltimore Avenue, Beltsville, Maryland 20705-2350 Dennis E. Desjardin Department of Biology, San Francisco State University, Jean-Marc Moncalvo San Francisco, California 94132 Centre for Biodiversity and Conservation Biology, Royal Ontario Museum and Department of Botany, University Bradley R. Kropp of Toronto, Toronto, Ontario, M5S 2C6 Canada Department of Biology, Utah State University, Logan, Utah 84322 Zai-Wei Ge Zhu-Liang Yang Lorelei L. Norvell Kunming Institute of Botany, Chinese Academy of Pacific Northwest Mycology Service, 6720 NW Skyline Sciences, Kunming 650204, P.R. China Boulevard, Portland, Oregon 97229-1309 Jason C. Slot Andrew Parker Biology Department, Clark University, 950 Main Street, 127 Raven Way, Metaline Falls, Washington 99153- Worcester, Massachusetts, 01609 9720 Joseph F. Ammirati Else C. Vellinga University of Washington, Biology Department, Box Department of Plant and Microbial Biology, 111 355325, Seattle, Washington 98195 Koshland Hall, University of California, Berkeley, California 94720-3102 Timothy J. -
LUNDY FUNGI: FURTHER SURVEYS 2004-2008 by JOHN N
Journal of the Lundy Field Society, 2, 2010 LUNDY FUNGI: FURTHER SURVEYS 2004-2008 by JOHN N. HEDGER1, J. DAVID GEORGE2, GARETH W. GRIFFITH3, DILUKA PEIRIS1 1School of Life Sciences, University of Westminster, 115 New Cavendish Street, London, W1M 8JS 2Natural History Museum, Cromwell Road, London, SW7 5BD 3Institute of Biological Environmental and Rural Sciences, University of Aberystwyth, SY23 3DD Corresponding author, e-mail: [email protected] ABSTRACT The results of four five-day field surveys of fungi carried out yearly on Lundy from 2004-08 are reported and the results compared with the previous survey by ourselves in 2003 and to records made prior to 2003 by members of the LFS. 240 taxa were identified of which 159 appear to be new records for the island. Seasonal distribution, habitat and resource preferences are discussed. Keywords: Fungi, ecology, biodiversity, conservation, grassland INTRODUCTION Hedger & George (2004) published a list of 108 taxa of fungi found on Lundy during a five-day survey carried out in October 2003. They also included in this paper the records of 95 species of fungi made from 1970 onwards, mostly abstracted from the Annual Reports of the Lundy Field Society, and found that their own survey had added 70 additional records, giving a total of 156 taxa. They concluded that further surveys would undoubtedly add to the database, especially since the autumn of 2003 had been exceptionally dry, and as a consequence the fruiting of the larger fleshy fungi on Lundy, especially the grassland species, had been very poor, resulting in under-recording. Further five-day surveys were therefore carried out each year from 2004-08, three in the autumn, 8-12 November 2004, 4-9 November 2007, 3-11 November 2008, one in winter, 23-27 January 2006 and one in spring, 9-16 April 2005. -
Megacollybia (Agaricales)
Rep. Tottori Mycol. Inst. 45 : 1–57, 2007. Megacollybia (Agaricales) KAREN W. HUGHES1, RONALD H. PETERSEN1, JUAN LUIS MATA2, NADEZHDA V. PSURTSEVA3, ALEXANDER E. KOVALENKO3, OLGA V. MOROZOVA3, EDGAR B. LICKEY 4, JOAQUIN CIFUENTES BLANCO5, DAVID P. LEWIS6, EIJI NAGASAWA7, ROY E. HALLING8, SEIJI TAKEHASHI9, M. CATHERINE AIME10, TOLGOR BAU11, TERRY HENKEL12 Abstract The genus Megacollybia, originally proposed for M. (Collybia) platyphylla, has traditional- ly been treated as monotaxic. A phylogenetic reconstruction based on ITS rDNA sequences indicates that several species are involved, with strong phylogeographic signal. Although morphological characters are largely qualitative, examination of basidiomata suggests that specimens included in discrete clades can be distinguished at the species level. On these bases (phylogenetic, morphological), several new taxa are proposed: M. clitocyboidea, M. texensis, M. fusca, M. subfurfuracea, M. rodmani (with f. murina) and M. marginata. Tricholomopsis fallax is transferred to Megacollybia; M. platyphylla remains the type species of the genus but appears to be restricted to Europe, Scandinavia and western and central Russia. Key words: Taxonomy, systematics, biogeography, phylogeny, phylogeography 1 Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 37996-1100 USA. 2 Department of Biology, University of South Alabama, Mobile, AL 36688 USA 3 Komarov Botanical Institute, 2 Prof. Popov Street, St Petersburg, 197376 Russia 4 Department of Biology, Bridgewater College, Bridgewater, -
Wild-Gathered Fungi for Health and Rural Livelihoods
Proceedings of the Nutrition Society (2006), 65, 190–197 DOI:10.1079/PNS2006491 g The Authors 2006 Wild-gathered fungi for health and rural livelihoods Miriam de Roma´n1*, Eric Boa1 and Steve Woodward2 1CABI Bioscience, Bakeham Lane, Egham, Surrey TW20 9TY, UK 2School of Biological Sciences, University of Aberdeen, Plant and Soil Science, St Machar Drive, Aberdeen AB24 3UU, UK Fungi are a good source of digestible proteins and fibre, are low in fat and energy and make a useful contribution to vitamin and mineral intake. In terms of current dietary advice, 80 g fungi represent one portion of vegetables. Dried fungi and concentrated extracts are also used as medicines and dietary supplements. Some species show strong anti-tumour and antioxidant activity by enhancing various immune system functions and lowering cholesterol levels. Nevertheless, there are also some safety concerns. Edible species might be mistaken for poi- sonous ones, high heavy-metal concentrations in wild edible fungi (WEF) are a known source of chronic poisoning and the consumption of WEF can contribute markedly to the radiocaesium intake of human subjects. Some regions of Europe have a strong WEF tradition, especially eastern Europe. In the UK the consumption of wild fungi is considered of minor importance. Only one-third of adults consume fungi (cultivated species and WEF) throughout the UK; the average intake of fungi in the UK is estimated to be 0.12 kg fresh weight per capita per year. At least eighty-two species of wild fungi are recorded as being consumed in the UK, although certain species (e.g. -
Phylogenetic Relationships of Rhizoctonia Fungi Within the Cantharellales
fungal biology 120 (2016) 603e619 journal homepage: www.elsevier.com/locate/funbio Phylogenetic relationships of Rhizoctonia fungi within the Cantharellales Dolores GONZALEZa,*, Marianela RODRIGUEZ-CARRESb, Teun BOEKHOUTc, Joost STALPERSc, Eiko E. KURAMAEd, Andreia K. NAKATANIe, Rytas VILGALYSf, Marc A. CUBETAb aInstituto de Ecologıa, A.C., Red de Biodiversidad y Sistematica, Carretera Antigua a Coatepec No. 351, El Haya, 91070 Xalapa, Veracruz, Mexico bDepartment of Plant Pathology, North Carolina State University, Center for Integrated Fungal Research, Campus Box 7251, Raleigh, NC 27695, USA cCBS Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands dDepartment of Microbial Ecology, Netherlands Institute of Ecology (NIOO/KNAW), Droevendaalsesteeg 10, 6708 PB Wageningen, The Netherlands eUNESP, Faculdade de Ci^encias Agronomicas,^ CP 237, 18603-970 Botucatu, SP, Brazil fDepartment of Biology, Duke University, Durham, NC 27708, USA article info abstract Article history: Phylogenetic relationships of Rhizoctonia fungi within the order Cantharellales were studied Received 2 January 2015 using sequence data from portions of the ribosomal DNA cluster regions ITS-LSU, rpb2, tef1, Received in revised form and atp6 for 50 taxa, and public sequence data from the rpb2 locus for 165 taxa. Data sets 1 January 2016 were analysed individually and combined using Maximum Parsimony, Maximum Likeli- Accepted 19 January 2016 hood, and Bayesian Phylogenetic Inference methods. All analyses supported the mono- Available online 29 January 2016 phyly of the family Ceratobasidiaceae, which comprises the genera Ceratobasidium and Corresponding Editor: Thanatephorus. Multi-locus analysis revealed 10 well-supported monophyletic groups that Joseph W. Spatafora were consistent with previous separation into anastomosis groups based on hyphal fusion criteria. -
Research Journal of Pharmaceutical, Biological and Chemical Sciences
ISSN: 0975-8585 Research Journal of Pharmaceutical, Biological and Chemical Sciences Phytochemical and Mineral Elements Composition of Bondazewia berkeleyi, Auricularia auricula and Ganoderma lucidum Fruiting Bodies. Emmanuel E Essien*, Victor N Mkpenie, and Stella M Akpan. Department of Chemistry, University of Uyo, Akwa Ibom State, Nigeria. ABSTRACT Fruiting bodies of wild edible medicinal mushrooms, Bondazewia berkeleyi, Auricularia auricula and Ganoderma lucidum, were analyzed for the presence of secondary metabolites and concentrations of toxic (Cd, Cr, Ni, Pb) and essential (Co, Cu, K, Li, Mn, Na, Zn) elements. The results revealed the presence of alkaloids, flavonoids, triterpenoids, saponins and carbohydrates in varied amounts. Tannins and phlobatannins were not detected. The levels (in ppm) of Na (156.80±310), K (246.20±6.62), Li (10.53±2.10), Zn (30.80±2.30), Cu (3.80±0.10), Mn (18.40±2.24), Co (2.98±0.17), Ni (0.024±0.080) and Cd (0.004±0.012) were highest in G. lucidum. Auricularia auricula showed the highest concentration (in ppm) of Pb (0.027±0.012) and Cr (0.005±0.100). However, the levels of the metals did not exceed the FAO/WHO stipulated dietary standards. This is the first chemical assessment of B. berkeleyi polypore. Keywords: Mushroom, Polypore, Secondary metabolites, Mineral nutrients, Dietary standards. *Corresponding author March – April 2015 RJPBCS 6(2) Page No. 200 ISSN: 0975-8585 INTRODUCTION Mushrooms are plant-like microorganisms, which grow like plant but are without chlorophyll. They depend on other organisms or plants for their nutrition. Information available in literature shows that mushrooms were first known to early Greeks and Romans who divided them into edible, poisonous, and medicinal mushrooms [1,2]. -
Plant Life MagillS Encyclopedia of Science
MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE Volume 4 Sustainable Forestry–Zygomycetes Indexes Editor Bryan D. Ness, Ph.D. Pacific Union College, Department of Biology Project Editor Christina J. Moose Salem Press, Inc. Pasadena, California Hackensack, New Jersey Editor in Chief: Dawn P. Dawson Managing Editor: Christina J. Moose Photograph Editor: Philip Bader Manuscript Editor: Elizabeth Ferry Slocum Production Editor: Joyce I. Buchea Assistant Editor: Andrea E. Miller Page Design and Graphics: James Hutson Research Supervisor: Jeffry Jensen Layout: William Zimmerman Acquisitions Editor: Mark Rehn Illustrator: Kimberly L. Dawson Kurnizki Copyright © 2003, by Salem Press, Inc. All rights in this book are reserved. No part of this work may be used or reproduced in any manner what- soever or transmitted in any form or by any means, electronic or mechanical, including photocopy,recording, or any information storage and retrieval system, without written permission from the copyright owner except in the case of brief quotations embodied in critical articles and reviews. For information address the publisher, Salem Press, Inc., P.O. Box 50062, Pasadena, California 91115. Some of the updated and revised essays in this work originally appeared in Magill’s Survey of Science: Life Science (1991), Magill’s Survey of Science: Life Science, Supplement (1998), Natural Resources (1998), Encyclopedia of Genetics (1999), Encyclopedia of Environmental Issues (2000), World Geography (2001), and Earth Science (2001). ∞ The paper used in these volumes conforms to the American National Standard for Permanence of Paper for Printed Library Materials, Z39.48-1992 (R1997). Library of Congress Cataloging-in-Publication Data Magill’s encyclopedia of science : plant life / edited by Bryan D. -
Version 1.1 Standardized Inventory Methodologies for Components Of
Version 1.1 Standardized Inventory Methodologies For Components Of British Columbia's Biodiversity: MACROFUNGI (including the phyla Ascomycota and Basidiomycota) Prepared by the Ministry of Environment, Lands and Parks Resources Inventory Branch for the Terrestrial Ecosystem Task Force, Resources Inventory Committee JANUARY 1997 © The Province of British Columbia Published by the Resources Inventory Committee Canadian Cataloguing in Publication Data Main entry under title: Standardized inventory methodologies for components of British Columbia’s biodiversity. Macrofungi : (including the phyla Ascomycota and Basidiomycota [computer file] Compiled by the Elements Working Group of the Terrestrial Ecosystem Task Force under the auspices of the Resources Inventory Committee. Cf. Pref. Available through the Internet. Issued also in printed format on demand. Includes bibliographical references: p. ISBN 0-7726-3255-3 1. Fungi - British Columbia - Inventories - Handbooks, manuals, etc. I. BC Environment. Resources Inventory Branch. II. Resources Inventory Committee (Canada). Terrestrial Ecosystems Task Force. Elements Working Group. III. Title: Macrofungi. QK605.7.B7S72 1997 579.5’09711 C97-960140-1 Additional Copies of this publication can be purchased from: Superior Reproductions Ltd. #200 - 1112 West Pender Street Vancouver, BC V6E 2S1 Tel: (604) 683-2181 Fax: (604) 683-2189 Digital Copies are available on the Internet at: http://www.for.gov.bc.ca/ric PREFACE This manual presents standardized methodologies for inventory of macrofungi in British Columbia at three levels of inventory intensity: presence/not detected (possible), relative abundance, and absolute abundance. The manual was compiled by the Elements Working Group of the Terrestrial Ecosystem Task Force, under the auspices of the Resources Inventory Committee (RIC). The objectives of the working group are to develop inventory methodologies that will lead to the collection of comparable, defensible, and useful inventory and monitoring data for the species component of biodiversity.