The Degradation of Cellulose and the Production of Cellulase, Xylanase, Mannanase and Amylase by Wood - Attacking Microfungi
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FUNGI ASSOCIATED with DECAY in TREATED SOUTHERN PINE UTILITY POLES in the EASTERN UNITED STATES1 Robert A
1 FUNGI ASSOCIATED WITH DECAY IN TREATED SOUTHERN PINE UTILITY POLES IN THE EASTERN UNITED STATES1 Robert A. Zabel Professor Department of Environmental and Forest Biology. SUNY College of Environmental Science and Forestry Syracuse. NY 13210 Frances F. Lombard Mycologist Center for Forest Mycology Research. USDA Forest Products Laboratory Madison. WI 53705 C. J. K. Wang and Fred Terracina Professor and Research Associate Department of Environmental and Forest Biology, SUNY College of Environmental Science and Forestry Syracuse, NY 13210 (Received July 1983) ABSTRACT Approximately 1,320 fungi were isolated and studied from 246 creosote- or pentachlorophenol- treated southern pine poles in service in the eastern United States. The fungi identified were Basid- iomycete decayers. soft rotters, and microfungi. White rot fungi predominated in the 262 Basidiomycete decayers isolated from 180 poles. The major Basidiomycetes isolated by radial position from poles of varying service ages appeared to develop initially in the outer treated zones and were often associated with seasoning checks. Some decay origins, however, appeared to be cases of preinvasion and escapes of preservative treatment. Five species of soft rot fungi comprised nearly 85% of 211 isolates obtained from 131 poles. They were isolated primarily from creosote-treated poles in outer treated zones at the groundline. Dissection analysis of 92 poles indicated that six developmental decay patterns and certain fungi were associated commonly with a pattern. The pole mycoflora isolated was relatively uniform in distribution in the eastern United States. The soft rotters and white rot group of Basidio- mycete decayers appear to be a more important component of the treated southern pine pole mycoflora than has been recognized previously. -
Volatile Metabolites from Microorganisms in Indoor Environments - Sampling, Analysis and Identification
Volatile Metabolites from Microorganisms in Indoor Environments - Sampling, Analysis and Identification by Anna-Lena Sunesson Akademisk avhandling som med tillstånd av rektorsämbetet vid Umeå Universitet för erhållande av Filosofie Doktorsexamen vid Matematisk-Naturvetenskapliga fakulteten, framlägges till offentlig granskning i Arbetslivsinstitutets stora föreläsningssal, Umeå, torsdagen den 30 november 1995, kl. 10.00. Fakultetsopponent: Prof. Alvin Fox, University of South Carolina, Columbia, U.S.A. Cover illustrations by VesaJussila Till Peter, Helena och Johan Mamma, Pappa och Ulf Title: Volatile Metabolites from Microorganisms in Indoor Environments - Sampling, Analysis and Identification. Author: Anna-Lena Sunesson, Umeå University, Department of Analytical Chemistry, S-901 87 Umeå and National Institute for Working Life, Analytical Chemistry Division, P. O. Box 7654, S-907 13 Umeå, Sweden. Abstract: Microorganisms are able to produce a wide variety of volatile organic compounds. This thesis deals with sampling, analysis and identification of such compounds, produced by microorganisms commonly found in buildings. The volatiles were sampled on adsorbents and analysed by thermal desorption cold trap-injection gas chromatography, with flame ionization and mass-spectrometric detection. The injection was optimized, with respect to the recovery of adsorbed components and the efficiency of the chromatographic separation, using multivariate methods. Eight adsorbents were evaluated with the object of finding the most suitable for sampling -
Monograph on Dematiaceous Fungi
Monograph On Dematiaceous fungi A guide for description of dematiaceous fungi fungi of medical importance, diseases caused by them, diagnosis and treatment By Mohamed Refai and Heidy Abo El-Yazid Department of Microbiology, Faculty of Veterinary Medicine, Cairo University 2014 1 Preface The first time I saw cultures of dematiaceous fungi was in the laboratory of Prof. Seeliger in Bonn, 1962, when I attended a practical course on moulds for one week. Then I handled myself several cultures of black fungi, as contaminants in Mycology Laboratory of Prof. Rieth, 1963-1964, in Hamburg. When I visited Prof. DE Varies in Baarn, 1963. I was fascinated by the tremendous number of moulds in the Centraalbureau voor Schimmelcultures, Baarn, Netherlands. On the other hand, I was proud, that El-Sheikh Mahgoub, a Colleague from Sundan, wrote an internationally well-known book on mycetoma. I have never seen cases of dematiaceous fungal infections in Egypt, therefore, I was very happy, when I saw the collection of mycetoma cases reported in Egypt by the eminent Egyptian Mycologist, Prof. Dr Mohamed Taha, Zagazig University. To all these prominent mycologists I dedicate this monograph. Prof. Dr. Mohamed Refai, 1.5.2014 Heinz Seeliger Heinz Rieth Gerard de Vries, El-Sheikh Mahgoub Mohamed Taha 2 Contents 1. Introduction 4 2. 30. The genus Rhinocladiella 83 2. Description of dematiaceous 6 2. 31. The genus Scedosporium 86 fungi 2. 1. The genus Alternaria 6 2. 32. The genus Scytalidium 89 2.2. The genus Aurobasidium 11 2.33. The genus Stachybotrys 91 2.3. The genus Bipolaris 16 2. -
Mycology Proficiency Testing Program
Mycology Proficiency Testing Program Test Event Critique January 2014 Table of Contents Mycology Laboratory 2 Mycology Proficiency Testing Program 3 Test Specimens & Grading Policy 5 Test Analyte Master Lists 7 Performance Summary 11 Commercial Device Usage Statistics 13 Mold Descriptions 14 M-1 Stachybotrys chartarum 14 M-2 Aspergillus clavatus 18 M-3 Microsporum gypseum 22 M-4 Scopulariopsis species 26 M-5 Sporothrix schenckii species complex 30 Yeast Descriptions 34 Y-1 Cryptococcus uniguttulatus 34 Y-2 Saccharomyces cerevisiae 37 Y-3 Candida dubliniensis 40 Y-4 Candida lipolytica 43 Y-5 Cryptococcus laurentii 46 Direct Detection - Cryptococcal Antigen 49 Antifungal Susceptibility Testing - Yeast 52 Antifungal Susceptibility Testing - Mold (Educational) 54 1 Mycology Laboratory Mycology Laboratory at the Wadsworth Center, New York State Department of Health (NYSDOH) is a reference diagnostic laboratory for the fungal diseases. The laboratory services include testing for the dimorphic pathogenic fungi, unusual molds and yeasts pathogens, antifungal susceptibility testing including tests with research protocols, molecular tests including rapid identification and strain typing, outbreak and pseudo-outbreak investigations, laboratory contamination and accident investigations and related environmental surveys. The Fungal Culture Collection of the Mycology Laboratory is an important resource for high quality cultures used in the proficiency-testing program and for the in-house development and standardization of new diagnostic tests. Mycology Proficiency Testing Program provides technical expertise to NYSDOH Clinical Laboratory Evaluation Program (CLEP). The program is responsible for conducting the Clinical Laboratory Improvement Amendments (CLIA)-compliant Proficiency Testing (Mycology) for clinical laboratories in New York State. All analytes for these test events are prepared and standardized internally. -
SOFT-ROT CAPABILITIES of the MAJOR MICROFUNGI, ISOLATED from DOUGLAS-FIR POLES in the Robert A
SOFT-ROT CAPABILITIES OF THE MAJOR MICROFUNGI, ISOLATED FROM DOUGLAS-FIR POLES IN THE Robert A. Zabel, C. J. K. Wang Professor Emeritus and Professor Faculty of Environmental and Forest Biology, SUNY College of Environmental Science and Forestry Syracuse, NY 13210 and Susan E. Anagnost Graduate Assistant Faculty of Wood Products Engineering, SUNY College of Environmental Science and Forestry Syracuse, NY 13210 (Received January 1990) ABSTRACT Four hundred seventeen fungi were isolated from 144 of the 163 Douglas-fir poles (ages 7 to 17 years and treatments CCA, penta and oil, or Cellon@)sampled from transmission lines or storage piles in New York and Pennsylvania. Microfungi predominated and comprised nearly 85% of all isolates. They were isolated primarily from treated zones and were most abundant in older CCA- treated poles in transmission lines. Antrodia carbonica and Postia placenta were the principal basid- iomycete decayers and isolated primarily from untreated zones in CCA-treated poles. A limited number of white-rot fungi were isolated from the treated and untreated zones of several poles. Seven of the 12 principal microfungi were established to have soft-rot capabilities. Soft rot was detected anatomically in 23 of the 144 poles in transmission lines. In most cases it was superficial and limited to several outer annual rings; however, it was severe in older CCA-treated poles and involved all of the treated zone and extended several centimeters radially into the untreated zone. Also, soft rot was detected anatomically and soft-rot fungi culturally, in 8 of 12 13-year-old CCA- treated poles that had been fumigated with Vapam 5 or 6 years previously. -
Myooviruses in Isolates of Gaeumannomyces And
MYOOVIRUSES IN ISOLATES OF GAEUMANNOMYCES AND PHIALOPHORA SPECIES BY Rose Mary McGinty Thesis submitted to the University of London for the degree of Doctor of Philosophy Biochemistry Department, Plant Pathology Department, Imperial College of Rothamsted Experimental Station, Science and Technology, Harpenden, London, Hert fordsh ire, SW7 2AZ. AL5 2JQ. 1981 To my Mother 3 MYCOVIRUSES IN ISOLATES OF GAEUMANNOMYCES AND PHIALOPHORA SPECIES By Rose Mary McGinty ABSTRACT Characterisation of virus particles from the avirulent or weakly pathogenic parasites of cereal roots, Phialophora graminicola (Pg), Phialophora species with lobed hyphopodia (P.sp.(lh)) and Gaeumannomyces graminis var. graminis (Ggg) is described. These fungi can cross protect cereal roots from damage caused by Gaeumannomyces graminis var. tritici (Ggt), the causal agent of "take-all" disease of wheat and barley. Total nucleic acid was extracted frcm the mycelium of each of 12 field isolates of the weakly pathogenic fungi. Extracts were treated with DNAse and RNAse under appropriate conditions to remove DNA and single-stranded RNA respectively, and the remaining dsRNA was then analysed by polyacrylamide gel electrophoresis. Eight isolates were found to contain dsRNA, with components varying from two to five in number for different isolates. Molecular weights of the dsRNA components ranged from 1x10 to greater than 6 x 10 . Isometric virus particles were extracted and purified from three of the isolates found to contain dsKNA, one each from the species Pg, P.sp. (lh) and Ggg. Evidence was obtained for the presence of two sero- logically unrelated viruses in P.sp. (lh), both of which were 35 nm in diameter. -
N 13. 2. Zigomicetes Identificaci!N De Otros Hongos Miceliares
ïí ×¼»²¬·º·½¿½·‰² ¼» ±¬®±• ¸±²¹±• ³·½»´·¿®»• ïíóï Ö±•»°¿ Ù»²’ Ö±•»° Ù«¿®®± ïíòïò ײ¬®±¼«½½·‰² ïíò îò Æ·¹±³·½»¬»• El aumento de pacientes con alteraciones en Los zigomicetes se diferencian del resto de su sistema inmunitario o la utilización de técnicas hongos miceliares por presentar hifas anchas, rami- agresivas en la medicina moderna, entre otros facto- ficadas, generalmente no septadas, y esporas sexua- res, han propiciado en las últimas décadas un consi- les denominadas zigosporas (Figura 13.1). L a s derable incremento de las infecciones producidas infecciones ocasionadas por estos hongos son referi- por microorganismos saprotrofos. Entre ellos cabe das como zigomicosis. Sin embargo, este término es citar numerosos hongos miceliares habitualmente muy amplio ya que incluye a zigomicetes que perte- colonizadores de diferentes tipos de sustratos vege- necen a dos grupos (órdenes) muy diferentes, los tales y frecuentes en el ambiente que rodea al hom- entomoftorales y los mucorales. Los primeros son bre(suelo,paredeshúmedas,aire...).Hace hongos endémicos de países tropicales y subtropica- relativamente poco tiempo, cuando dichos hongos les que suelen ocasionar micosis subcutáneas [1-3] eran aislados de muestras clínicas solían ser consi- y que no vamos a tratar en este capítulo ya que es derados como meros contaminantes. Sin embargo, difícil encontrarlos en nuestro país. Los mucorales, se ha demostrado reiteradamente que muchos de en cambio, están ampliamente distribuidos por las estos hongos son capaces de infectar al hombre. diferentes áreas geográficas del globo, y algunos de Estos hechos deben ser considerados por los micro- ellos son capaces de ocasionar un amplio rango de biólogos clínicos, los cuales según las evidencias infecciones en el hombre [1-3]. -
Mycology Proficiency Testing Program
Mycology Proficiency Testing Program Test Event Critique January 2013 Mycology Laboratory Table of Contents Mycology Laboratory 2 Mycology Proficiency Testing Program 3 Test Specimens & Grading Policy 5 Test Analyte Master Lists 7 Performance Summary 11 Commercial Device Usage Statistics 15 Mold Descriptions 16 M-1 Exserohilum species 16 M-2 Phialophora species 20 M-3 Chrysosporium species 25 M-4 Fusarium species 30 M-5 Rhizopus species 34 Yeast Descriptions 38 Y-1 Rhodotorula mucilaginosa 38 Y-2 Trichosporon asahii 41 Y-3 Candida glabrata 44 Y-4 Candida albicans 47 Y-5 Geotrichum candidum 50 Direct Detection - Cryptococcal Antigen 53 Antifungal Susceptibility Testing - Yeast 55 Antifungal Susceptibility Testing - Mold (Educational) 60 1 Mycology Laboratory Mycology Laboratory at the Wadsworth Center, New York State Department of Health (NYSDOH) is a reference diagnostic laboratory for the fungal diseases. The laboratory services include testing for the dimorphic pathogenic fungi, unusual molds and yeasts pathogens, antifungal susceptibility testing including tests with research protocols, molecular tests including rapid identification and strain typing, outbreak and pseudo-outbreak investigations, laboratory contamination and accident investigations and related environmental surveys. The Fungal Culture Collection of the Mycology Laboratory is an important resource for high quality cultures used in the proficiency-testing program and for the in-house development and standardization of new diagnostic tests. Mycology Proficiency Testing Program provides technical expertise to NYSDOH Clinical Laboratory Evaluation Program (CLEP). The program is responsible for conducting the Clinical Laboratory Improvement Amendments (CLIA)-compliant Proficiency Testing (Mycology) for clinical laboratories in New York State. All analytes for these test events are prepared and standardized internally. -
A Worldwide List of Endophytic Fungi with Notes on Ecology and Diversity
Mycosphere 10(1): 798–1079 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/19 A worldwide list of endophytic fungi with notes on ecology and diversity Rashmi M, Kushveer JS and Sarma VV* Fungal Biotechnology Lab, Department of Biotechnology, School of Life Sciences, Pondicherry University, Kalapet, Pondicherry 605014, Puducherry, India Rashmi M, Kushveer JS, Sarma VV 2019 – A worldwide list of endophytic fungi with notes on ecology and diversity. Mycosphere 10(1), 798–1079, Doi 10.5943/mycosphere/10/1/19 Abstract Endophytic fungi are symptomless internal inhabits of plant tissues. They are implicated in the production of antibiotic and other compounds of therapeutic importance. Ecologically they provide several benefits to plants, including protection from plant pathogens. There have been numerous studies on the biodiversity and ecology of endophytic fungi. Some taxa dominate and occur frequently when compared to others due to adaptations or capabilities to produce different primary and secondary metabolites. It is therefore of interest to examine different fungal species and major taxonomic groups to which these fungi belong for bioactive compound production. In the present paper a list of endophytes based on the available literature is reported. More than 800 genera have been reported worldwide. Dominant genera are Alternaria, Aspergillus, Colletotrichum, Fusarium, Penicillium, and Phoma. Most endophyte studies have been on angiosperms followed by gymnosperms. Among the different substrates, leaf endophytes have been studied and analyzed in more detail when compared to other parts. Most investigations are from Asian countries such as China, India, European countries such as Germany, Spain and the UK in addition to major contributions from Brazil and the USA. -
An All-Taxa Biodiversity Inventory of the Huron Mountain Club
AN ALL-TAXA BIODIVERSITY INVENTORY OF THE HURON MOUNTAIN CLUB Version: August 2016 Cite as: Woods, K.D. (Compiler). 2016. An all-taxa biodiversity inventory of the Huron Mountain Club. Version August 2016. Occasional papers of the Huron Mountain Wildlife Foundation, No. 5. [http://www.hmwf.org/species_list.php] Introduction and general compilation by: Kerry D. Woods Natural Sciences Bennington College Bennington VT 05201 Kingdom Fungi compiled by: Dana L. Richter School of Forest Resources and Environmental Science Michigan Technological University Houghton, MI 49931 DEDICATION This project is dedicated to Dr. William R. Manierre, who is responsible, directly and indirectly, for documenting a large proportion of the taxa listed here. Table of Contents INTRODUCTION 5 SOURCES 7 DOMAIN BACTERIA 11 KINGDOM MONERA 11 DOMAIN EUCARYA 13 KINGDOM EUGLENOZOA 13 KINGDOM RHODOPHYTA 13 KINGDOM DINOFLAGELLATA 14 KINGDOM XANTHOPHYTA 15 KINGDOM CHRYSOPHYTA 15 KINGDOM CHROMISTA 16 KINGDOM VIRIDAEPLANTAE 17 Phylum CHLOROPHYTA 18 Phylum BRYOPHYTA 20 Phylum MARCHANTIOPHYTA 27 Phylum ANTHOCEROTOPHYTA 29 Phylum LYCOPODIOPHYTA 30 Phylum EQUISETOPHYTA 31 Phylum POLYPODIOPHYTA 31 Phylum PINOPHYTA 32 Phylum MAGNOLIOPHYTA 32 Class Magnoliopsida 32 Class Liliopsida 44 KINGDOM FUNGI 50 Phylum DEUTEROMYCOTA 50 Phylum CHYTRIDIOMYCOTA 51 Phylum ZYGOMYCOTA 52 Phylum ASCOMYCOTA 52 Phylum BASIDIOMYCOTA 53 LICHENS 68 KINGDOM ANIMALIA 75 Phylum ANNELIDA 76 Phylum MOLLUSCA 77 Phylum ARTHROPODA 79 Class Insecta 80 Order Ephemeroptera 81 Order Odonata 83 Order Orthoptera 85 Order Coleoptera 88 Order Hymenoptera 96 Class Arachnida 110 Phylum CHORDATA 111 Class Actinopterygii 112 Class Amphibia 114 Class Reptilia 115 Class Aves 115 Class Mammalia 121 INTRODUCTION No complete species inventory exists for any area. -
Fungal Diversity Is Not Determined by Mineral and Chemical Differences in Serpentine Substrates
Fungal Diversity Is Not Determined by Mineral and Chemical Differences in Serpentine Substrates Stefania Daghino1,2*, Claude Murat3, Elisa Sizzano1, Mariangela Girlanda1, Silvia Perotto1,2 1 Department of Life Sciences and Systems Biology, University of Torino, Torino, Italy, 2 Interdepartmental Centre ‘‘G. Scansetti’’ for Studies on Asbestos and Other Toxic Particulates, University of Torino, Torino, Italy, 3 Unite´ Mixte de Recherche de l’Institut National de la Recherche Agronomique - Lorraine Universite´ ‘Interactions Arbres/ Microorganismes’, Centre de Nancy - Champenoux, France Abstract The physico-chemical properties of serpentine soils lead to strong selection of plant species. Whereas many studies have described the serpentine flora, little information is available on the fungal communities dwelling in these sites. Asbestos minerals, often associated with serpentine rocks, can be weathered by serpentine-isolated fungi, suggesting an adaptation to this substrate. In this study, we have investigated whether serpentine substrates characterized by the presence of rocks with distinct mineral composition could select for different fungal communities. Both fungal isolation and 454 pyrosequencing of amplicons obtained from serpentine samples following direct DNA extraction revealed some fungal taxa shared by the four ophiolitic substrates, but also highlighted several substrate-specific taxa. Bootstrap analysis of 454 OTU abundances indicated weak clustering of fungal assemblages from the different substrates, which did not match substrate classification based on exchangeable macronutrients and metals. Intra-substrate variability, as assessed by DGGE profiles, was similar across the four serpentine substrates, and comparable to inter-substrate variability. These findings indicate the absence of a correlation between the substrate (mineral composition and available cations) and the diversity of the fungal community. -
Aspartic Peptidase of Phialophora Verrucosa As Target of HIV
Journal of Enzyme Inhibition and Medicinal Chemistry ISSN: 1475-6366 (Print) 1475-6374 (Online) Journal homepage: https://www.tandfonline.com/loi/ienz20 Aspartic peptidase of Phialophora verrucosa as target of HIV peptidase inhibitors: blockage of its enzymatic activity and interference with fungal growth and macrophage interaction Marcela Q. Granato, Ingrid S. Sousa, Thabatta L. S. A. Rosa, Diego S. Gonçalves, Sergio H. Seabra, Daniela S. Alviano, Maria C. V. Pessolani, André L. S. Santos & Lucimar F. Kneipp To cite this article: Marcela Q. Granato, Ingrid S. Sousa, Thabatta L. S. A. Rosa, Diego S. Gonçalves, Sergio H. Seabra, Daniela S. Alviano, Maria C. V. Pessolani, André L. S. Santos & Lucimar F. Kneipp (2020) Aspartic peptidase of Phialophoraverrucosa as target of HIV peptidase inhibitors: blockage of its enzymatic activity and interference with fungal growth and macrophage interaction, Journal of Enzyme Inhibition and Medicinal Chemistry, 35:1, 629-638, DOI: 10.1080/14756366.2020.1724994 To link to this article: https://doi.org/10.1080/14756366.2020.1724994 © 2020 The Author(s). Published by Informa Published online: 10 Feb 2020. UK Limited, trading as Taylor & Francis Group. Submit your article to this journal Article views: 318 View related articles View Crossmark data Full Terms & Conditions of access and use can be found at https://www.tandfonline.com/action/journalInformation?journalCode=ienz20 JOURNAL OF ENZYME INHIBITION AND MEDICINAL CHEMISTRY 2020, VOL. 35, NO. 1, 629–638 https://doi.org/10.1080/14756366.2020.1724994 RESEARCH PAPER Aspartic peptidase of Phialophora verrucosa as target of HIV peptidase inhibitors: blockage of its enzymatic activity and interference with fungal growth and macrophage interaction aà aà b c,d e Marcela Q.