Isolation and Expression of Rat Liver Sepiapterin Reductase Cdna
Total Page:16
File Type:pdf, Size:1020Kb
Proc. Nat!. Acad. Sci. USA Vol. 87, pp. 6436-6440, August 1990 Genetics Isolation and expression of rat liver sepiapterin reductase cDNA (tetrahydrobiopterin/biopterin/pyruvoyltetrahydropterin/aromatic amino acid hydroxylase/molecular cloning) BRUCE A. CITRON*, SHELDON MILSTIEN*, JOANNE C. GUTIERREZt, ROBERT A. LEVINE, BRENDA L. YANAK*§, AND SEYMOUR KAUFMAN*¶ *Laboratory of Neurochemistry, Room 3D30, Building 36, and tLaboratory of Cell Biology, National Institute of Mental Health, National Institutes of Health, Bethesda, MD 20892; and tLaboratory of Molecular Neurobiology, Lafayette Clinic, 951 East Lafayette, Detroit, MI 48207 Contributed by Seymour Kaufman, June 7, 1990 ABSTRACT Sepiapterin reductase (7,8-dihydrobiopterin: either case, the final carbonyl reduction to form tetrahydro- NADP+ oxidoreductase, EC 1.1.1.153) catalyzes the terminal biopterin must be catalyzed by sepiapterin reductase. step in the biosynthetic pathway for tetrahydrobiopterin, the In the present study, we have screened a rat liver cDNA cofactor necessary for aromatic amino acid hydroxylation. We library with a specific antibody that reacts positively to the report here the isolation of a cDNA clone for rat liver sepia- enzyme band on Western blots (19). These clones were used pterin reductase. The cDNA has been excised from a lambda to further characterize the enzyme and to begin to elucidate vector and the DNA sequence was determined. The insert the functional sites ofthe enzymes in the tetrahydrobiopterin contains the coding sequence for at least 95% of the rat enzyme biosynthetic pathway. 11 and is fused to the Escherichia coli (3-galactosidase N-terminal segment and the lac promoter. The N-terminal region of the clone contains an extraordinarily high G+C content. The MATERIALS AND METHODS amino acid sequence deduced from the clone is in agreement Screening. Sepiapterin reductase from rat erythrocytes was with the size and composition of the enzyme and was matched purified according to the procedure of Sueoka and Katoh (7). to several tryptic peptide sequences. The enzyme encoded by Antibodies to the enzyme were isolated and tested as de- the cDNA insert was shown to have sepiapterin reductase scribed (19). All commercial reagents were used according to activity after expression in E. cohl. Structural similarities were the manufacturers' recommendations. Antibody screens identified between this protein and several enzymes that should were carried out with the use ofthe Protoblot immunoscreen- contain similar nucleotide and pteridine binding sites. ing system (Promega) with our rabbit anti-rat erythrocyte sepiapterin reductase together with goat anti-rabbit IgG con- The cofactor 5,6,7,8-tetrahydrobiopterin is an absolute re- jugated to alkaline phosphatase. A rat liver cDNA library (Stratagene) in the lambda ZAP II vector (20) containing 2 x quirement for the activity of the three aromatic amino acid 106 primary inserts was tested for the presence of sepiapterin hydroxylases phenylalanine hydroxylase, tyrosine hydroxy- reductase clones. Additional screening with a labeled DNA lase, and tryptophan hydroxylase (1). The latter two hydrox- oligomer was carried out according to Church and Gilbert ylases catalyze rate-limiting steps in the biosynthesis of the (21) conditions to identify full-length sepiapterin reductase neurotransmitters dopamine, norepinephrine, and serotonin. inserts in phage vectors transferred in situ to Amersham Whereas the aromatic amino acid hydroxylases have ex- Hybond N nylon membranes. Positive candidates with either tremely limited tissue distribution, the biosynthetic enzymes procedure were purified through three subsequent rounds of for tetrahydrobiopterin, and tetrahydrobiopterin itself, are isolation and then manipulated according to standard recom- present in most cell types examined. This divergent tissue binant procedures (22, 23). DNA sequence analysis was distribution may reflect broader roles for the cofactor than carried out according to the dideoxynucleotide chain- have yet been fully identified (2-4). Such widespread expres- termination method ofSanger et al. (24). The genotypes ofthe sion suggests that tetrahydrobiopterin may be important in bacterial strains used have been described by Sambrook et al. some very basic cellular processes (4). In any case, the role (22). of the cofactor in aromatic amino acid hydroxylation is Sequence Analysis. DNA and protein sequence compari- critical to normal neurological function and several examples sons were made with the aid of the University of Wisconsin of cofactor deficiency disorders have been described (re- Genetics Computing Group Programs version 6.1 (25). The viewed in ref. 5). data bases that were screened for similar sequences included Sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxi- the National Biomedical Research Foundation protein data doreductase, EC 1.1.1.153) was first discovered in the base (version 35.0), which contained 12,476 protein se- chicken and rat liver by Matsubara et al. (6). The purification quences, and the GenBank (26) (version 62.0), and the and characterization of sepiapterin reductase from rat eryth- European Molecular Biology Laboratory (27) (version 19.0) rocytes has demonstrated it to be an acidic protein composed nucleic acid data bases, which held 31,232 different se- oftwo 28-kDa subunits (7). This enzyme is involved in one or quences. The sepiapterin reductase amino acid sequence was both of the two final reductions of the de novo tetrahydro- compared to the protein sequence data base and also to all of biopterin biosynthetic pathway necessary to convert 6- the theoretical translations ofthe nucleic acid entries with the pyruvoyltetrahydropterin to tetrahydrobiopterin (7-12), de- aid of the programs FASTA and TFASTA, respectively, both picted in Fig. 1 (dashed line). There are two possible routes with a word size of 2 (28). The sepiapterin reductase cDNA for single-step reductions of each of the carbonyl groups of sequence was matched to the nucleic acid data bases by using 6-pyruvoyltetrahydropterin, with one pathway using only with a word size of 6. sepiapterin reductase for both reductions and the other using FASTA and WORDSEARCH, each a different reductase to carry out the first reduction (9). In §Present address: Biology Department, Colgate University, Hamil- ton, NY 13346. The publication costs of this article were defrayed in part by page charge $To whom reprint requests should be addressed. payment. This article must therefore be hereby marked "advertisement" "The sequence reported in this paper has been deposited in the in accordance with 18 U.S.C. §1734 solely to indicate this fact. GenBank data base (accession no. M36410). 6436 Downloaded by guest on September 25, 2021 Genetics: Citron et al. Proc. Natl. Acad. Sci. USA 87 (1990) 6437 GTP the disappearance of sepiapterin spectrophotometrically at 410 nm at 370C in a reaction mixture containing 50 mM GTP potassium phosphate (pH 6.5), 200 AM NADPH, and 50 ,uM Cyclohydrolase sepiapterin (29). 7,8-Dihydroneopterin Triphosphate RESULTS Isolation of Sepiapterin Reductase cDNA. Rabbit anti-rat 6-Pyruvoyltetrahydrolpterin Synthase sepiapterin reductase antibody was used to screen 855,000 rat liver cDNA inserts in a A library. Eight clones retained a positive signal after three rounds of screening and isolation. 6-Pyruvoyltetr,ahydropterin This frequency is 2- to 10-fold lower than the value predicted by the prevalence of the protein (0.01-0.2%) (7) and the I Seplapterin Reductase likelihood that the insert should have been in-frame with the I5T ,B-galactosidase peptide on the vector. Three ofthese cDNAs were excised to form phagemids for restriction site mapping, 5,6,7,8-TetrahyFdroblopterin sequence analysis, and expression. The restriction patterns for two were indistinguishable and one ofthese, pBLY1, was FIG. 1. The tetrahydrobiopterin biosynthetic pathway (11, 13- sequenced and is depicted in Figs. 2 and 3. 18). The last two reductions are carbonyl reductions, which may both pBLY1 contains a 787-base open reading frame linked to an be carried out by sepiapterin reductase or an alternative reductase E. coli d3-galactosidase N-terminal fragment. The 8-galacto- may catalyze the first carbonyl reduction of 6-pyruvoyltetrahydro- pterin. sidase translation frame in this plasmid is under the control of an E. coli lac promoter. When induced, this composite Peptide Sequencing. Purified sepiapterin reductase was DNA molecule sbould produce a 298-residue fusion protein, reduced and carboxymethylated and then digested with tryp- the last 259 amino acids of which are derived from the cDNA sin [1% (wt/wt)]; the peptide fragments were separated by insert. The molecular weight of a sepiapterin reductase subunit has been reported to be 27,500 (7). This value is HPLC (reverse-phase Vydac C8, 15 x 0.46 cm) and col- consistent with a protein containing 230-270 lected. The tryptic peptides were sequenced on an amino acids and Applied indicated that our clone was missing just a few N-terminal Biosystems 470A sequencer equipped with a 120A PTH residues. analyzer. Peptides that yielded ambiguous data at all cycles We searched for clones containing the complete N- were further separated by microbore reverse-phase HPLC terminal sequence by repeating the screening of the cDNA (Brownlee C18, 30 x 2.1 mm) and the peaks were reanalyzed library with a 38-base DNA oligomer corresponding to the to produce distinct sequences. extreme 5' end ofthe insert in pBLY1. Surprisingly, only one Expression.