Galaxy User Conference Freiburg 15.-16.03.2018 in Freiburg
Galaxy User Conference Freiburg Official server opening: The Freiburg Galaxy server becomes the new https://usegalaxy.eu - server. Let's celebrate!
Program
Thursday 15.03.2018
09:00-10:00 Registration & morning coffee
10:00-10:30 Welcome Björn Grüning (Freiburg, Germany)
10:30-11:00 de.NBI & RBC Andreas Tauch (Bielefeld, Germany), Rolf Backofen (Freiburg, Germany)
11:00-11:30 DNA methylation signatures follow Stephan Nothjunge preformed chromatin compartments in (Freiburg, Germany) cardiac myocytes
11:30-12:00 Analysis of the cardiac myocyte Ralf Gilsbach (Freiburg, epigenome using Galaxy Germany)
12:00-12:30 Using direct reprogramming to find the Sören Lienkamp (Freiburg, master regulators of renal Germany) tubulogenesis and factors leading to congenital kidney defects
12:30-13:30 Lunch
13:30-14:00 tba Ralf Weber (Birmingham, UK)
14:00-14:30 Workflow4Metabolomics - Towards an Gildas Le Corguillé (Roscoff, international computing infrastructure France) and a tools showcase for Metabolomics 14:30-15:00 Deployment of genome databases for Anthony Bretaudeau insects using Galaxy Genome (Rennes, France) Annotation
15:00-15:30 Coffee break
15:30-16:00 Galaxy-E: A french initiative dedicated Yvan Le-bras (Rennes, to Macro-Ecological data analysis France)
16:00-16:30 Microbiota analysis using Galaxy Saskia Hiltemann (Rotterdam, Netherlands)
16:30 Uhr Björn Grüning (Freiburg,
usegalaxy.eu/au launch Germany), Simon Gladman (Melbourne, Australia)
19:00 Uhr Dinner at Martinsbräu (everybody pays by its own, http://www.martinsbräu-freiburg.de)
Friday 16.3.2018
09:00-09:30 tba Teresa Müller (Freiburg, Germany)
09:30-10:00 Gene discovery with KnetMiner Ajit Pratap Singh (Hertfordshire, UK)
10:00-10:30 Fruit Fly reproduction Ihor Yurkevych (Ivano-Frankivsk, Ukraine)
10:30-11:00 Coffee break 11:00-11:30 Proteomic analyses of label-free mass Matthias Fahrner (Freiburg, spectrometry data using OpenMS in Germany) Galaxy
11:30-12:00 Quality control and analysis of large Melanie Föll (Freiburg, scale MALDI imaging data of peptides Germany) from formalin-fixed paraffin-embedded tissues within the Galaxy environment
12:00-12:30 Galaxy for microscopy image analysis Thomas Wollmann workflows and systematic phenotyping (Heidelberg, Germany)
12:30-13:30 Lunch
13:30-14:00 RNA Workbench Florian Eggenhofer (Freiburg, Germany)
14:00-14:30 Integrated analysis of miRNA-mRNA Beata Scholz (Debrecen, regulatory networks in chordoma Hungary) tumors using Galaxy
14:30-15:00 Extracting biological sense from Daria Onichtchouk RNA-seq time series in dynamic (Freiburg, Germany) biological systems
15:00-15:30 Coffee Break
15:30-16:00 Galaxy Australia/USA communities Simon Gladman (Melbourne, Australia), Anton Nekrutenko (PSU, USA)
16:00-16:30 ELIXIR Communities Frederik Coppens (Gent, Belgium), John Hancock (ELIXIR, UK)
16:30-17:00 The Galaxy Training Network Bérénice Batut (Freiburg, Germany)
Venue:
Albert-Ludwigs-Universität Freiburg Otto-Krayer-Haus, Albertstr.25, 79104 Freiburg Contact phone number: +49 172-9893034 (Björn Grüning)
Room:
Lecture hall (01 089)
How to get to the Otto-Krayer-Haus (OKH)
From Basel airport ● take a train to Freiburg Hauptbahnhof ● take the airport shuttle bus to Freiburg Hauptbahnhof ○ http://www.freiburger-reisedienst.de/en/airportbus/timetable.php ○ one-way 19,90€ ○ round-trip 39 € (tickets are valid for one month)
From Freiburg Hauptbahnhof
It is only 800m to walk from Freiburg main station to the venue:
https://goo.gl/maps/n87JRYfaMyw
Accommodation for foreign visitors
Suggestions for Hotels
The Alex Hotel (nearby OKH) Rheinstraße 29 https://www.the-alex-hotel.de
Hotel am Rathaus (city center) Rathausgasse 4-8 http://www.am-rathaus.de
Hotel Barbara (city center) Poststrasse 4 http://www.hotel-barbara.de
Intercity Hotel Freiburg (main station) Bismarckallee 3 http://de.intercityhotel.com/Freiburg/InterCityHotel-Freiburg
Motel one (city center) Friedrichring 1 https://www.motel-one.com/de/hotels/freiburg
Note: In Freiburg you have to pay an additional accommodation tax. For business trips this tax has not to be paid if your employer fills out this form: http://www.freiburg.de/servicebw/UebernachtungSt_Arbeitgeberbescheinigung.pdf Show this form to the hotel