A Cellulose Synthase-Derived Enzyme Catalyses 3-O-Glucuronosylation In
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Final Report Template
Native Legumes as a Grain Crop for Diversification in Australia RIRDC Publication No. 10/223 RIRDCInnovation for rural Australia Native Legumes as a Grain Crop for Diversification in Australia by Megan Ryan, Lindsay Bell, Richard Bennett, Margaret Collins and Heather Clarke October 2011 RIRDC Publication No. 10/223 RIRDC Project No. PRJ-000356 © 2011 Rural Industries Research and Development Corporation. All rights reserved. ISBN 978-1-74254-188-4 ISSN 1440-6845 Native Legumes as a Grain Crop for Diversification in Australia Publication No. 10/223 Project No. PRJ-000356 The information contained in this publication is intended for general use to assist public knowledge and discussion and to help improve the development of sustainable regions. You must not rely on any information contained in this publication without taking specialist advice relevant to your particular circumstances. While reasonable care has been taken in preparing this publication to ensure that information is true and correct, the Commonwealth of Australia gives no assurance as to the accuracy of any information in this publication. The Commonwealth of Australia, the Rural Industries Research and Development Corporation (RIRDC), the authors or contributors expressly disclaim, to the maximum extent permitted by law, all responsibility and liability to any person, arising directly or indirectly from any act or omission, or for any consequences of any such act or omission, made in reliance on the contents of this publication, whether or not caused by any negligence on the part of the Commonwealth of Australia, RIRDC, the authors or contributors. The Commonwealth of Australia does not necessarily endorse the views in this publication. -
Generated by SRI International Pathway Tools Version 25.0, Authors S
An online version of this diagram is available at BioCyc.org. Biosynthetic pathways are positioned in the left of the cytoplasm, degradative pathways on the right, and reactions not assigned to any pathway are in the far right of the cytoplasm. Transporters and membrane proteins are shown on the membrane. Periplasmic (where appropriate) and extracellular reactions and proteins may also be shown. Pathways are colored according to their cellular function. Gcf_000238675-HmpCyc: Bacillus smithii 7_3_47FAA Cellular Overview Connections between pathways are omitted for legibility. -
Liver Glucose Metabolism in Humans
Biosci. Rep. (2016) / 36 / art:e00416 / doi 10.1042/BSR20160385 Liver glucose metabolism in humans Mar´ıa M. Adeva-Andany*1, Noemi Perez-Felpete*,´ Carlos Fernandez-Fern´ andez*,´ Cristobal´ Donapetry-Garc´ıa* and Cristina Pazos-Garc´ıa* *Nephrology Division, Hospital General Juan Cardona, c/ Pardo Bazan´ s/n, 15406 Ferrol, Spain Synopsis Information about normal hepatic glucose metabolism may help to understand pathogenic mechanisms underlying obesity and diabetes mellitus. In addition, liver glucose metabolism is involved in glycosylation reactions and con- nected with fatty acid metabolism. The liver receives dietary carbohydrates directly from the intestine via the portal vein. Glucokinase phosphorylates glucose to glucose 6-phosphate inside the hepatocyte, ensuring that an adequate flow of glucose enters the cell to be metabolized. Glucose 6-phosphate may proceed to several metabolic path- ways. During the post-prandial period, most glucose 6-phosphate is used to synthesize glycogen via the formation of glucose 1-phosphate and UDP–glucose. Minor amounts of UDP–glucose are used to form UDP–glucuronate and UDP– galactose, which are donors of monosaccharide units used in glycosylation. A second pathway of glucose 6-phosphate metabolism is the formation of fructose 6-phosphate, which may either start the hexosamine pathway to produce UDP-N-acetylglucosamine or follow the glycolytic pathway to generate pyruvate and then acetyl-CoA. Acetyl-CoA may enter the tricarboxylic acid (TCA) cycle to be oxidized or may be exported to the cytosol to synthesize fatty acids, when excess glucose is present within the hepatocyte. Finally, glucose 6-phosphate may produce NADPH and ribose 5-phosphate through the pentose phosphate pathway. -
Open Matthew R Moreau Ph.D. Dissertation Finalfinal.Pdf
The Pennsylvania State University The Graduate School Department of Veterinary and Biomedical Sciences Pathobiology Program PATHOGENOMICS AND SOURCE DYNAMICS OF SALMONELLA ENTERICA SEROVAR ENTERITIDIS A Dissertation in Pathobiology by Matthew Raymond Moreau 2015 Matthew R. Moreau Submitted in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy May 2015 The Dissertation of Matthew R. Moreau was reviewed and approved* by the following: Subhashinie Kariyawasam Associate Professor, Veterinary and Biomedical Sciences Dissertation Adviser Co-Chair of Committee Bhushan M. Jayarao Professor, Veterinary and Biomedical Sciences Dissertation Adviser Co-Chair of Committee Mary J. Kennett Professor, Veterinary and Biomedical Sciences Vijay Kumar Assistant Professor, Department of Nutritional Sciences Anthony Schmitt Associate Professor, Veterinary and Biomedical Sciences Head of the Pathobiology Graduate Program *Signatures are on file in the Graduate School iii ABSTRACT Salmonella enterica serovar Enteritidis (SE) is one of the most frequent common causes of morbidity and mortality in humans due to consumption of contaminated eggs and egg products. The association between egg contamination and foodborne outbreaks of SE suggests egg derived SE might be more adept to cause human illness than SE from other sources. Therefore, there is a need to understand the molecular mechanisms underlying the ability of egg- derived SE to colonize the chicken intestinal and reproductive tracts and cause disease in the human host. To this end, the present study was carried out in three objectives. The first objective was to sequence two egg-derived SE isolates belonging to the PFGE type JEGX01.0004 to identify the genes that might be involved in SE colonization and/or pathogenesis. -
Fruits and Seeds of Genera in the Subfamily Faboideae (Fabaceae)
Fruits and Seeds of United States Department of Genera in the Subfamily Agriculture Agricultural Faboideae (Fabaceae) Research Service Technical Bulletin Number 1890 Volume I December 2003 United States Department of Agriculture Fruits and Seeds of Agricultural Research Genera in the Subfamily Service Technical Bulletin Faboideae (Fabaceae) Number 1890 Volume I Joseph H. Kirkbride, Jr., Charles R. Gunn, and Anna L. Weitzman Fruits of A, Centrolobium paraense E.L.R. Tulasne. B, Laburnum anagyroides F.K. Medikus. C, Adesmia boronoides J.D. Hooker. D, Hippocrepis comosa, C. Linnaeus. E, Campylotropis macrocarpa (A.A. von Bunge) A. Rehder. F, Mucuna urens (C. Linnaeus) F.K. Medikus. G, Phaseolus polystachios (C. Linnaeus) N.L. Britton, E.E. Stern, & F. Poggenburg. H, Medicago orbicularis (C. Linnaeus) B. Bartalini. I, Riedeliella graciliflora H.A.T. Harms. J, Medicago arabica (C. Linnaeus) W. Hudson. Kirkbride is a research botanist, U.S. Department of Agriculture, Agricultural Research Service, Systematic Botany and Mycology Laboratory, BARC West Room 304, Building 011A, Beltsville, MD, 20705-2350 (email = [email protected]). Gunn is a botanist (retired) from Brevard, NC (email = [email protected]). Weitzman is a botanist with the Smithsonian Institution, Department of Botany, Washington, DC. Abstract Kirkbride, Joseph H., Jr., Charles R. Gunn, and Anna L radicle junction, Crotalarieae, cuticle, Cytiseae, Weitzman. 2003. Fruits and seeds of genera in the subfamily Dalbergieae, Daleeae, dehiscence, DELTA, Desmodieae, Faboideae (Fabaceae). U. S. Department of Agriculture, Dipteryxeae, distribution, embryo, embryonic axis, en- Technical Bulletin No. 1890, 1,212 pp. docarp, endosperm, epicarp, epicotyl, Euchresteae, Fabeae, fracture line, follicle, funiculus, Galegeae, Genisteae, Technical identification of fruits and seeds of the economi- gynophore, halo, Hedysareae, hilar groove, hilar groove cally important legume plant family (Fabaceae or lips, hilum, Hypocalypteae, hypocotyl, indehiscent, Leguminosae) is often required of U.S. -
Transcriptomic and Proteomic Profiling Provides Insight Into
BASIC RESEARCH www.jasn.org Transcriptomic and Proteomic Profiling Provides Insight into Mesangial Cell Function in IgA Nephropathy † † ‡ Peidi Liu,* Emelie Lassén,* Viji Nair, Celine C. Berthier, Miyuki Suguro, Carina Sihlbom,§ † | † Matthias Kretzler, Christer Betsholtz, ¶ Börje Haraldsson,* Wenjun Ju, Kerstin Ebefors,* and Jenny Nyström* *Department of Physiology, Institute of Neuroscience and Physiology, §Proteomics Core Facility at University of Gothenburg, University of Gothenburg, Gothenburg, Sweden; †Division of Nephrology, Department of Internal Medicine and Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan; ‡Division of Molecular Medicine, Aichi Cancer Center Research Institute, Nagoya, Japan; |Department of Immunology, Genetics and Pathology, Uppsala University, Uppsala, Sweden; and ¶Integrated Cardio Metabolic Centre, Karolinska Institutet Novum, Huddinge, Sweden ABSTRACT IgA nephropathy (IgAN), the most common GN worldwide, is characterized by circulating galactose-deficient IgA (gd-IgA) that forms immune complexes. The immune complexes are deposited in the glomerular mesangium, leading to inflammation and loss of renal function, but the complete pathophysiology of the disease is not understood. Using an integrated global transcriptomic and proteomic profiling approach, we investigated the role of the mesangium in the onset and progression of IgAN. Global gene expression was investigated by microarray analysis of the glomerular compartment of renal biopsy specimens from patients with IgAN (n=19) and controls (n=22). Using curated glomerular cell type–specific genes from the published literature, we found differential expression of a much higher percentage of mesangial cell–positive standard genes than podocyte-positive standard genes in IgAN. Principal coordinate analysis of expression data revealed clear separation of patient and control samples on the basis of mesangial but not podocyte cell–positive standard genes. -
Medicinal Importance of Glycyrrhiza Glabra L. (Fabaceae Family)
Global Journal of Pharmacology 8 (1): 08-13, 2014 ISSN 1992-0075 © IDOSI Publications, 2014 DOI: 10.5829/idosi.gjp.2014.8.1.81179 A Review: Medicinal Importance of Glycyrrhiza glabra L. (Fabaceae Family) Muhammad Parvaiz, Khalid Hussain, Saba Khalid, Nigam Hussnain, Nukhba Iram, Zubair Hussain and Muhammad Azhar Ali Department of Botany, Institute of Chemical and Biological Sciences (ICBS), University of Gujrat (UOG), Gujrat 50700, Pakistan Abstract: Glycyrrhiza glabra L.usually known as Mulaithi, Yashtimadu or licorice is a common herb, which has since long been used in traditional Ayurvedic and Chinese medicine for its mystic effects to cure numerous diseases such as hepatitis C,ulcers, pulmonary and skin diseases etc. The herb has been used in medicines for thousands of years. Its roots comprises of a compound that is 50 times sweeter than sugar. Significant constituents isolated from licorice include flavaonoids, iso flavonoids, saponins, tripentenes and the most imperative is Glycyrrhizin. Due to these elements it has important pharmacological activities such as antioxidant, antibacterial, antiviral and antiinflammatory as well. Key words: Glycyrrhiza glabra L. Antibacterial Antiviral Activities Pakistan INTRODUCTION Mulaithi is a famous medicinal herb that grows in numerous parts of the world. It is one of the oldest and Glycyrrhiza glabra L. (Fabaceae) generally known as widely used herb from the earliest medical history of Mulaithi or Liquorice is a small perennial herb native to Ayurveda, both as a medicine and also as a flavoring to the Mediterranean region, central and southwest Asia. disguise the unpleasant flavor of other medications This herb is cultivated in Italy, Russia, France,UK, USA, [18].Yashtimadu has been shown to have great Germany, Spain, China and Northern India. -
Glycyrrhiza Glabra) Herb As a Feed Additive in Poultry: Current Knowledge and Prospects
animals Review Use of Licorice (Glycyrrhiza glabra) Herb as a Feed Additive in Poultry: Current Knowledge and Prospects Mahmoud Alagawany 1,* , Shaaban S. Elnesr 2 , Mayada R. Farag 3, Mohamed E. Abd El-Hack 1 , Asmaa F. Khafaga 4, Ayman E. Taha 5, Ruchi Tiwari 6, Mohd. Iqbal Yatoo 7 , Prakash Bhatt 8, Gopi Marappan 9 and Kuldeep Dhama 10,* 1 Department of Poultry, Faculty of Agriculture, Zagazig University, Zagazig 44511, Egypt 2 Department of Poultry Production, Faculty of Agriculture, Fayoum University, Fayoum 63514, Egypt 3 Forensic Medicine and Toxicology Department, Faculty of Veterinary Medicine, Zagazig University, Zagazig 44511, Egypt 4 Department of Pathology, Faculty of Veterinary Medicine, Alexandria University, Edfina 22758, Egypt 5 Department of Animal Husbandry and Animal Wealth Development, Faculty of Veterinary Medicine, Alexandria University, Edfina 22758, Egypt 6 Department of Veterinary Microbiology and Immunology, College of Veterinary Sciences, UP Pandit Deen Dayal Upadhayay Pashu Chikitsa Vigyan Vishwavidyalay Evum Go-Anusandhan Sansthan (DUVASU), Mathura-281001, Uttar Pradesh, India 7 Division of Veterinary Clinical Complex, Faculty of Veterinary Sciences and Animal Husbandry, Jammu and Kashmir, Srinagar 190006, India 8 Teaching Veterinary Clinical Complex, College of Veterinary and Animal Sciences, Govind Ballabh Pant University of Agriculture and Technology, Pantnagar-263145 (Udham Singh Nagar), Uttarakhand, India 9 Division of Avian Physiology and Reproduction, ICAR-Central Avian Research Institute, Izatnagar, -
A Single Mutation Affects Both N-Acetylglucosaminyltransferase
Proc. Natl. Acad. Sci. USA Vol. 89, pp. 2267-2271, March 1992 Biochemistry A single mutation affects both N-acetylglucosaminyltransferase and glucuronosyltransferase activities in a Chinese hamster ovary cell mutant defective in heparan sulfate biosynthesis (glycosaminoglycans/proteoglycans/glycosyltransferases/replica plating) KERSTIN LIDHOLT*, JULIE L. WEINKEt, CHERYL S. KISERt, FULGENTIUS N. LUGEMWAt, KAREN J. BAMEtt, SELA CHEIFETZ§, JOAN MASSAGUO§, ULF LINDAHL*¶1, AND JEFFREY D. ESKOt II tDepartment of Biochemistry, Schools of Medicine and Dentistry, University of Alabama, Birmingham, AL 35294; *Depaltment of Veterinary Medical Chemistry, The Biomedical Center, Swedish University of Agricultural Sciences, S-751 23, Uppsala, Sweden; and §Department of Cell Biology and Genetics, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, New York, NY 10021 Communicated by Marilyn G. Farquhar, December 10, 1991 ABSTRACT Mutants of Chinese hamster ovary cells have bovine serum. A resistant mutant was isolated and then been found that no longer produce heparan sulfate. Charac- treated with mutagen (7), and a ouabain-resistant clone was terization of one of the mutants, pgsD-677, showed that it lacks selected in growth medium containing 1 mM ouabain. The both N-acetylglucosaminyl- and glucuronosyltransferase, en- introduction of these markers did not alter the proteoglycan zymes required for the polymerization of heparan sulfate composition of the cells. chains. pgsD-677 also accumulates 3- to 4-fold more chon- Cell hybrids were generated by co-plating 2 x 105 cells of droitin sulfate than the wild type. Cell hybrids derived from pgsD-677 and OT-1 in individual wells of a 24-well plate. pgsD-677 and wild type regained both transferase activities and After overnight incubation, the mixed monolayers were the capacity to synthesize heparan sulfate. -
Specific Functions of Exostosin-Like 3 (EXTL3) Gene Products Shuhei Yamada
Yamada Cellular & Molecular Biology Letters (2020) 25:39 Cellular & Molecular https://doi.org/10.1186/s11658-020-00231-y Biology Letters REVIEW LETTER Open Access Specific functions of Exostosin-like 3 (EXTL3) gene products Shuhei Yamada Correspondence: shuheiy@meijo-u. ac.jp Abstract Department of Pathobiochemistry, Exostosin-like 3 EXTL3 Faculty of Pharmacy, Meijo ( ) encodes the glycosyltransferases responsible for the University, 150 Yagotoyama, biosynthesis of the backbone structure of heparan sulfate (HS), a sulfated Tempaku-ku, Nagoya 468-8503, polysaccharide that is ubiquitously distributed on the animal cell surface and in the Japan extracellular matrix. A lack of EXTL3 reduces HS levels and causes embryonic lethality, indicating its indispensable role in the biosynthesis of HS. EXTL3 has also been identified as a receptor molecule for regenerating islet-derived (REG) protein ligands, which have been shown to stimulate islet β-cell growth. REG proteins also play roles in keratinocyte proliferation and/or differentiation, tissue regeneration and immune defenses in the gut as well as neurite outgrowth in the central nervous system. Compared with the established function of EXTL3 as a glycosyltransferase in HS biosynthesis, the REG-receptor function of EXTL3 is not conclusive. Genetic diseases caused by biallelic mutations in the EXTL3 gene were recently reported to result in a neuro-immuno-skeletal dysplasia syndrome. EXTL3 is a key molecule for the biosynthesis of HS and may be involved in the signal transduction of REG proteins. Keywords: Exostosin-like 3 (EXTL3), Heparan sulfate (HS), Biosynthesis, Glycosaminoglycan, Regenerating islet-derived (REG) protein Introduction Hereditary multiple exostosis (HME), also known as multiple osteochondromas, is a rare disorder occurring in approximately 1 in 50,000 individuals [1, 2]. -
Molecular Bases of Drug Resistance in Hepatocellular Carcinoma
cancers Review Molecular Bases of Drug Resistance in Hepatocellular Carcinoma Jose J.G. Marin 1,2,* , Rocio I.R. Macias 1,2 , Maria J. Monte 1,2 , Marta R. Romero 1,2, Maitane Asensio 1, Anabel Sanchez-Martin 1, Candela Cives-Losada 1, Alvaro G. Temprano 1, Ricardo Espinosa-Escudero 1, Maria Reviejo 1, Laura H. Bohorquez 1 and Oscar Briz 1,2,* 1 Experimental Hepatology and Drug Targeting (HEVEFARM) Group, University of Salamanca, IBSAL, 37007 Salamanca, Spain; [email protected] (R.I.R.M.); [email protected] (M.J.M.); [email protected] (M.R.R.); [email protected] (M.A.); [email protected] (A.S.-M.); [email protected] (C.C.-L.); [email protected] (A.G.T.); [email protected] (R.E.-E.); [email protected] (M.R.); [email protected] (L.H.B.) 2 Center for the Study of Liver and Gastrointestinal Diseases (CIBERehd), Carlos III National Institute of Health, 28029 Madrid, Spain * Correspondence: [email protected] (J.J.G.M.); [email protected] (O.B.); Tel.: +34-663182872 (J.J.G.M.); +34-923294674 (O.B.) Received: 4 June 2020; Accepted: 20 June 2020; Published: 23 June 2020 Abstract: The poor outcome of patients with non-surgically removable advanced hepatocellular carcinoma (HCC), the most frequent type of primary liver cancer, is mainly due to the high refractoriness of this aggressive tumor to classical chemotherapy. Novel pharmacological approaches based on the use of inhibitors of tyrosine kinases (TKIs), mainly sorafenib and regorafenib, have provided only a modest prolongation of the overall survival in these HCC patients. -
Plant Nucleotide Sugar Formation, Interconversion, and Salvage by Sugar Recycling*
Plant Nucleotide Sugar Formation, Interconversion, and Salvage by Sugar Recycling∗ Maor Bar-Peled1,2 and Malcolm A. O’Neill2 1Department of Plant Biology and 2Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602; email: [email protected], [email protected] Annu. Rev. Plant Biol. 2011. 62:127–55 Keywords First published online as a Review in Advance on nucleotide sugar biosynthesis, nucleotide sugar interconversion, March 1, 2011 nucleotide sugar salvage, UDP-glucose, UDP-xylose, The Annual Review of Plant Biology is online at UDP-arabinopyranose mutase plant.annualreviews.org This article’s doi: Abstract 10.1146/annurev-arplant-042110-103918 Nucleotide sugars are the universal sugar donors for the formation Copyright c 2011 by Annual Reviews. by Oak Ridge National Lab on 05/20/11. For personal use only. of polysaccharides, glycoproteins, proteoglycans, glycolipids, and All rights reserved glycosylated secondary metabolites. At least 100 genes encode proteins 1543-5008/11/0602-0127$20.00 involved in the formation of nucleotide sugars. These nucleotide ∗ Annu. Rev. Plant Biol. 2011.62:127-155. Downloaded from www.annualreviews.org Dedicated to Peter Albersheim for his inspiration sugars are formed using the carbohydrate derived from photosynthesis, and his pioneering studies in determining the the sugar generated by hydrolyzing translocated sucrose, the sugars structure and biological functions of complex carbohydrates. released from storage carbohydrates, the salvage of sugars from glycoproteins and glycolipids, the recycling of sugars released during primary and secondary cell wall restructuring, and the sugar generated during plant-microbe interactions. Here we emphasize the importance of the salvage of sugars released from glycans for the formation of nucleotide sugars.