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Characterization of the Aerobic Anoxygenic Phototrophic Bacterium Sphingomonas Sp
microorganisms Article Characterization of the Aerobic Anoxygenic Phototrophic Bacterium Sphingomonas sp. AAP5 Karel Kopejtka 1 , Yonghui Zeng 1,2, David Kaftan 1,3 , Vadim Selyanin 1, Zdenko Gardian 3,4 , Jürgen Tomasch 5,† , Ruben Sommaruga 6 and Michal Koblížek 1,* 1 Centre Algatech, Institute of Microbiology, Czech Academy of Sciences, 379 81 Tˇreboˇn,Czech Republic; [email protected] (K.K.); [email protected] (Y.Z.); [email protected] (D.K.); [email protected] (V.S.) 2 Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark 3 Faculty of Science, University of South Bohemia, 370 05 Ceskˇ é Budˇejovice,Czech Republic; [email protected] 4 Institute of Parasitology, Biology Centre, Czech Academy of Sciences, 370 05 Ceskˇ é Budˇejovice,Czech Republic 5 Research Group Microbial Communication, Technical University of Braunschweig, 38106 Braunschweig, Germany; [email protected] 6 Laboratory of Aquatic Photobiology and Plankton Ecology, Department of Ecology, University of Innsbruck, 6020 Innsbruck, Austria; [email protected] * Correspondence: [email protected] † Present Address: Department of Molecular Bacteriology, Helmholtz-Centre for Infection Research, 38106 Braunschweig, Germany. Abstract: An aerobic, yellow-pigmented, bacteriochlorophyll a-producing strain, designated AAP5 Citation: Kopejtka, K.; Zeng, Y.; (=DSM 111157=CCUG 74776), was isolated from the alpine lake Gossenköllesee located in the Ty- Kaftan, D.; Selyanin, V.; Gardian, Z.; rolean Alps, Austria. Here, we report its description and polyphasic characterization. Phylogenetic Tomasch, J.; Sommaruga, R.; Koblížek, analysis of the 16S rRNA gene showed that strain AAP5 belongs to the bacterial genus Sphingomonas M. Characterization of the Aerobic and has the highest pairwise 16S rRNA gene sequence similarity with Sphingomonas glacialis (98.3%), Anoxygenic Phototrophic Bacterium Sphingomonas psychrolutea (96.8%), and Sphingomonas melonis (96.5%). -
A NEWS BULLETIN Published Quarterly by the NEW ZEALAND
A N E W S B U L L E T I N p u b l i s h e d q u a r t e r l y b y t h e NEW ZEALAND ANTARCTIC SOCIETY THESE VISITORS TO LAKE FRYXELL IN THE TAYLOR VALLEY ARE LIKE DWARFS AGAINST THE TOWERING CANADA GLACIER WHICH FLOWS DOWN FROM THE ASGAARD RANGE. —Photo by R. K. McBride. Antarctic Division, D.S.I.R. September 1972 «i (Successor to "Antarctic News Bulletin") Vol. 6, No. 7 67th ISSUE Editor: H. F. GRIFFITHS, 14 Woodchester Avenue, Christchurch 1. Assistant Editor: J. M. CAFFIN, 35 Chepstow Avenue, Christchurch 5. Address all contributions, enquiries, etc., to the Editor. All Business Communications, Subscriptions, etc., to: The Secretary, New Zealand Antarctic Society, P.O. Box 1223, Christchurch, N.Z CONTENTS ARTICLES SECOND-IN-COMMAND POLAR ACTIVITIES NEW ZEALAND 222, 225, 231, 240, 243, 251, 253 U.S.A 226, 232, 252 AUSTRALIA 236 UNITED KINGDOM 234 U.S.S.R 238, 239, 241 SOUTH AFRICA 242, 250 CZECHOSLOVAKIA 235 SUB-ANTARCTIC CAMPBELL ISLAND GENERAL LONE TRIP TO POLE DISCOVERY EXPEDITION LETTERS WHALING QUOTAS FIXED ANTARCTIC BOOKSHELF Fifteen years have passed since the International Geophysical Year of 1957-58 and it might be thought that the Antarctic Continent, through the continuing research carried out by the participating nations, would by now have yielded up all its secrets. But this is a false premise; new discoveries in the various branches of science have either highlighted gaps in our knowledge or have pointed the way to investigation in new fields. -
Characteristics of Bacterial Community in Cloud Water at Mt. Tai: Similarity and Disparity Under Polluted and Non-Polluted Cloud Episodes
Characteristics of bacterial community in cloud water at Mt. Tai: similarity and disparity under polluted and non-polluted cloud episodes Min Wei 1, Caihong Xu1, Jianmin Chen1,2,*, Chao Zhu1, Jiarong Li1, Ganglin Lv 1 5 1 Environment Research Institute, School of Environmental Science and Engineering, Shandong University, Ji’nan 250100, China 2 Shanghai Key Laboratory of Atmospheric Particle Pollution and Prevention (LAP), Fudan Tyndall Centre, Department of Environmental Science & Engineering, Fudan University, Shanghai 200433, China 10 Correspondence to: JM.Chen ([email protected]) Abstract: Bacteria are widely distributed in atmospheric aerosols and are indispensable components of clouds, playing an important role in the atmospheric hydrological cycle. However, limited information is 15 available about the bacterial community structure and function, especially for the increasing air pollution in the North China Plain. Here, we present a comprehensive characterization of bacterial community composition, function, variation and environmental influence for cloud water collected at Mt. Tai from 24 Jul to 23 Aug 2014. Using Miseq 16S rRNA gene sequencing, the highly diverse bacterial community in cloud water and the predominant phyla of Proteobacteria, Bacteroidetes, 20 Cyanobacteria and Firmicutes were investigated. Bacteria that survive at low temperature, radiation, and poor nutrient conditions were found in cloud water, suggesting adaptation to an extreme environment. The bacterial gene functions predicted from the 16S rRNA gene using -
Antarctic Treaty Handbook
Annex Proposed Renumbering of Antarctic Protected Areas Existing SPA’s Existing Site Proposed Year Annex V No. New Site Management Plan No. Adopted ‘Taylor Rookery 1 101 1992 Rookery Islands 2 102 1992 Ardery Island and Odbert Island 3 103 1992 Sabrina Island 4 104 Beaufort Island 5 105 Cape Crozier [redesignated as SSSI no.4] - - Cape Hallet 7 106 Dion Islands 8 107 Green Island 9 108 Byers Peninsula [redesignated as SSSI no. 6] - - Cape Shireff [redesignated as SSSI no. 32] - - Fildes Peninsula [redesignated as SSSI no.5] - - Moe Island 13 109 1995 Lynch Island 14 110 Southern Powell Island 15 111 1995 Coppermine Peninsula 16 112 Litchfield Island 17 113 North Coronation Island 18 114 Lagotellerie Island 19 115 New College Valley 20 116 1992 Avian Island (was SSSI no. 30) 21 117 ‘Cryptogram Ridge’ 22 118 Forlidas and Davis Valley Ponds 23 119 Pointe-Geologic Archipelago 24 120 1995 Cape Royds 1 121 Arrival Heights 2 122 Barwick Valley 3 123 Cape Crozier (was SPA no. 6) 4 124 Fildes Peninsula (was SPA no. 12) 5 125 Byers Peninsula (was SPA no. 10) 6 126 Haswell Island 7 127 Western Shore of Admiralty Bay 8 128 Rothera Point 9 129 Caughley Beach 10 116 1995 ‘Tramway Ridge’ 11 130 Canada Glacier 12 131 Potter Peninsula 13 132 Existing SPA’s Existing Site Proposed Year Annex V No. New Site Management Plan No. Adopted Harmony Point 14 133 Cierva Point 15 134 North-east Bailey Peninsula 16 135 Clark Peninsula 17 136 North-west White Island 18 137 Linnaeus Terrace 19 138 Biscoe Point 20 139 Parts of Deception Island 21 140 ‘Yukidori Valley’ 22 141 Svarthmaren 23 142 Summit of Mount Melbourne 24 118 ‘Marine Plain’ 25 143 Chile Bay 26 144 Port Foster 27 145 South Bay 28 146 Ablation Point 29 147 Avian Island [redesignated as SPA no. -
Functions, Transmission and Emission of the Canopy Microbiota Tania Fort
Functions, transmission and emission of the canopy microbiota Tania Fort To cite this version: Tania Fort. Functions, transmission and emission of the canopy microbiota. Vegetal Biology. Univer- sité de Bordeaux, 2019. English. NNT : 2019BORD0338. tel-02869590 HAL Id: tel-02869590 https://tel.archives-ouvertes.fr/tel-02869590 Submitted on 16 Jun 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. THÈSE PRESENTÉE POUR OBTENIR LE GRADE DE DOCTEUR DE L’UNIVERSITE DE BORDEAUX ECOLE DOCTORALE SCIENCES ET ENVIRONNEMENTS ECOLOGIE ÉVOLUTIVE, FONCTIONNELLE, ET DES COMMUNAUTÉS Par Tania Fort Fonctions, transmission et émission du microbiote de la canopée Sous la direction de Corinne Vacher Soutenue le 10 décembre 2019 Membres du jury : Mme. Anne-Marie DELORT Directrice de recherche Institut de Chimie de Clermont-Ferrand Rapporteuse M. Stéphane Uroz Directeur de recherche INRA Nancy Rapporteur Mme. Patricia Luis Maître de conférence Université de Lyon 1 Rapporteuse Mme. Annabel Porté Directrice de recherche INRA Bordeaux Présidente Mme. Corinne Vacher Directrice de recherche INRA Bordeaux Directrice Fonctions, transmission et émission du microbiote de la canopée. Les arbres interagissent avec des communautés microbiennes diversifiées qui influencent leur fitness et le fonctionnement des écosystèmes terrestres. -
Davis Valley and Forlidas Pond, Dufek Massif
Measure 2 (2005) Annex D Management Plan for Antarctic Specially Protected Area No. 119 DAVIS VALLEY AND FORLIDAS POND, DUFEK MASSIF 1. Description of Values to be Protected Forlidas Pond (82°27'28"S, 51°16'48"W) and several ponds along the northern ice margin of the Davis Valley (82°27'30"S, 51°05'W), in the Dufek Massif, Pensacola Mountains, were originally designated as a Specially Protected Area through Recommendation XVI-9 (1991, SPA No. 23) after a proposal by the United States of America. The Area was designated on the grounds that it “contains some of the most southerly freshwater ponds known in Antarctica containing plant life” which “should be protected as examples of unique near-pristine freshwater ecosystems and their catchments”. The original Area comprised two sections approximately 500 metres apart with a combined total area of around 6 km2. It included Forlidas Pond and the meltwater ponds along the ice margin at the northern limit of the Davis Valley. The site has been rarely visited and until recently there has been little information available on the ecosystems within the Area. This Management Plan reaffirms the original reason for designation of the Area, recognizing the ponds and their associated plant life as pristine examples of a southerly freshwater habitat. However, following a field visit made in December 2003 (Hodgson and Convey, 2004) the values identified for special protection and the boundaries for the Area have been expanded as described below. The Davis Valley and the adjacent ice-free valleys is one of the most southerly ‘dry valley’ systems in Antarctica and, as of May 2005, is the most southerly protected area in Antarctica. -
Glacio-Meteorological Conditions in the Vicinity of the Belgian
Antarctic Science 22(1), 79–85 (2010) & Antarctic Science Ltd 2009 doi:10.1017/S0954102009990344 Glacio-meteorological conditions in the vicinity of the Belgian Princess Elisabeth Station, Antarctica FRANK PATTYN1*, KENICHI MATSUOKA2 and JOHAN BERTE3 1Laboratoire de Glaciologie, De´partement des Sciences de la Terre et de l’Environnement, Universite´ Libre de Bruxelles, CP 160/03, Avenue F.D. Roosevelt 50, B-1050 Brussels, Belgium 2Department of Earth and Space Sciences, University of Washington, Box 35130, Seattle, WA 98195, USA 3International Polar Foundation, Rue des deux gares 120A, B-1070 Brussels, Belgium *[email protected] Abstract: During two consecutive reconnaissance surveys in 2004 and 2005 and a revisit in 2008, the glaciological and meteorological conditions in the vicinity of the new Belgian Princess Elisabeth Station (71857'S; 23820'E) on Utsteinen Ridge were investigated. We set up an automatic weather station, measured the ice thickness around the Utsteinen Ridge, and established a mass balance stake network. These baseline investigations show that Utsteinen Ridge is a relatively sheltered spot from the main katabatic winds. Furthermore, winter temperature conditions are rather mild, confirming the coreless winter conditions of the Antarctic ice sheet. Mass balance is generally low (near zero) with a small accumulation to the east and relatively little ablation to the west of Utsteinen Ridge. Ice flow in the vicinity of the station is also minimal, since the Sør Rondane Mountains upstream of the station block most of the ice flow, a feature that is most apparent in the area where the station is situated. Measurements of the surface topography separated by four years show that the construction of the station seems to have a limited effect on the redistribution of snow around it. -
Characteristics of Bacterial Community in Cloud Water at Mt Tai: Similarity and Disparity Under Polluted and Non-Polluted Cloud Episodes
Atmos. Chem. Phys., 17, 5253–5270, 2017 www.atmos-chem-phys.net/17/5253/2017/ doi:10.5194/acp-17-5253-2017 © Author(s) 2017. CC Attribution 3.0 License. Characteristics of bacterial community in cloud water at Mt Tai: similarity and disparity under polluted and non-polluted cloud episodes Min Wei1, Caihong Xu1, Jianmin Chen1,2, Chao Zhu1, Jiarong Li1, and Ganglin Lv1 1Environment Research Institute, School of Environmental Science and Engineering, Shandong University, Jinan 250100, China 2Shanghai Key Laboratory of Atmospheric Particle Pollution and Prevention (LAP), Fudan Tyndall Centre, Department of Environmental Science & Engineering, Fudan University, Shanghai 200433, China Correspondence to: Jianmin Chen ([email protected]) Received: 29 August 2016 – Discussion started: 20 September 2016 Revised: 10 March 2017 – Accepted: 19 March 2017 – Published: 24 April 2017 Abstract. Bacteria are widely distributed in atmospheric pal coordinate analysis (PCoA) indicated a significant dis- aerosols and are indispensable components of clouds, play- parity between polluted and non-polluted samples. Linear ing an important role in the atmospheric hydrological cycle. discriminant analysis effect size (LEfSe) demonstrated that However, limited information is available about the bacte- potential pathogens were enriched in the polluted cloud sam- rial community structure and function, especially for the in- ples, whereas the diverse ecological function groups were creasing air pollution in the North China Plain. Here, we significant in the non-polluted samples. Discrepant commu- present a comprehensive characterization of bacterial com- nity structure determined by redundancy analysis (RDA) in- munity composition, function, variation, and environmental dicated that the major ions in cloud water and PM2:5 in the influence for cloud water collected at Mt Tai from 24 July atmosphere have a negative impact on bacteria, playing a vi- to 23 August 2014. -
7555-01-U National Science Foundation
This document is scheduled to be published in the Federal Register on 04/23/2019 and available online at https://federalregister.gov/d/2019-08024, and on govinfo.gov 7555-01-U NATIONAL SCIENCE FOUNDATION 45 CFR Part 670 Conservation of Antarctic Animals and Plants RIN: 3145-AA59 AGENCY: National Science Foundation. ACTION: Direct final rule. SUMMARY: Pursuant to the Antarctic Conservation Act of 1978, as amended, the National Science Foundation (NSF) is amending its regulations to reflect changes to designated Antarctic specially protected areas (ASPA), Antarctic specially managed areas (ASMA) and historic sites or monuments (HSM). These changes reflect decisions already adopted by the Antarctic Treaty Parties at recent Antarctic Treaty Consultative Meetings (ATCM). The United States Department of State heads the United States delegation to these annual Antarctic Treaty meetings. DATES: Effective [INSERT DATE OF PUBLICATION IN THE FEDERAL REGISTER]. FOR FURTHER INFORMATION CONTACT: Bijan Gilanshah, Assistant General Counsel, Office of the General Counsel, at 703-292-8060, National Science Foundation, 2415 Eisenhower Avenue, Suite W 18200, Alexandria, VA 22314. SUPPLEMENTARY INFORMATION: The Antarctic Conservation Act of 1978, as amended ("ACA") (16 U.S.C. 2401, et seq.) implements the Protocol on Environmental Protection to the Antarctic Treaty ("the Protocol"). Annex V contains provisions for the protection of specially designated areas specially managed areas and historic sites and monuments. Section 2405 of title 16 of the ACA directs the Director of the National Science Foundation to issue such regulations as are necessary and appropriate to implement Annex V to the Protocol. The Antarctic Treaty Parties, which includes the United States, periodically adopt measures to establish, consolidate or revoke specially protected areas, specially managed areas and historical sites or monuments in Antarctica. -
23085402.Pdf
wooi Seventh Gondwana Symposium São Paulo, Brazil July 18-22, 1988 ABSTRACTS SPONSORING ORGANIZATIONS Subconmission on Gondwsna Stratigraphy, Conission on Stratigraphy, Inter- national Union of Geological Sciences (HJGS) Instituto de Geociências, Universidade de Sao Paulo, São Paulo Petróleo Brasileiro S.A. (PETROBRÁS), Rio de Janeiro Departamento Nacional da Produção Mineral (DNFM). Ministério das Minas e Emergia, Brasília Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP), São Paulo Secretaria da Ciência e Tecnologia do Estado de São Paulo Comissão InterraLnisterial para os Recursos do Mar (CIRM), Brasília Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq), Brasília Empresas Nucleares Brasileiras (NUCLEBRÁS), Rio de Janeiro Academia Brasileira de Ciências, Rio de Janeiro Sociedade Brasileira de Geologia, São Paulo Sociedade Brasileira de Geofísica, São Paulo Sociedade Brasileira de Paleontologia, são Paulo Centro de Investigação do Gondwana, Instituto de Geociências, Universida- de Federal do Rio Grande do Sul, Porto Alegre Eliane - Azulejos e Pisos, Criciúma Lapis Joham Faber S/A, São Carlos Instituto Antártico Argentino, Buenos Aires Geologia e Sondagens Ltda (GEOSOL), Belo Horizonte OTHER CONTRIBUTIONS IGCP Project 260 Earth's glacial record IGCP Project 237 Floras of the Gondwanic continents LiSÍ of Contents Page Gondwana Plate margins and fragmentation history (IV) (Monday, July 18) 01-07 Gondwana basins (II) (Monday, July 18) 19-30 Gondwana biota and biostratigraphy (III) (Tuesday, July 19) 31-46 Crustal -
Sphingomonas Zeae Sp. Nov., Isolated from the Stem of Zea Mays
International Journal of Systematic and Evolutionary Microbiology (2015), 65, 2542–2548 DOI 10.1099/ijs.0.000298 Sphingomonas zeae sp. nov., isolated from the stem of Zea mays Peter Ka¨mpfer,1 Hans-Ju¨rgen Busse,2 John A. McInroy3 and Stefanie P. Glaeser1 Correspondence 1Institut fu¨r Angewandte Mikrobiologie, Universita¨t Giessen, Giessen, Germany Peter Ka¨mpfer 2Institut fu¨r Mikrobiologie, Veterina¨rmedizinische Universita¨t, A-1210 Wien, Austria peter.kaempfer@agrar. 3 uni-giessen.de Department of Entomology and Plant Pathology, Auburn University, Alabama, USA A yellow-pigmented bacterial isolate (strain JM-791T) obtained from the healthy internal stem tissue of 1-month-old corn (Zea mays, cultivar ‘Sweet Belle’) grown at the Plant Breeding Unit of the E.V. Smith Research Center in Tallassee (Elmore county), Alabama, USA, was taxonomically characterized. The study employing a polyphasic approach, including 16S RNA gene sequence analysis, physiological characterization, estimation of the ubiquinone and polar lipid patterns, and fatty acid composition, revealed that strain JM-791T shared 16S rRNA gene sequence similarities with type strains of Sphingomonas paucimobilis (98.3 %), Sphingomonas pseudosanguinis (97.5 %) and Sphingomonas yabuuchiae (97.4 %), but also showed pronounced differences, both genotypically and phenotypically. On the basis of these results, a novel species of the genus Sphingomonas is described, for which we propose the name Sphingomonas zeae sp. nov. with the type strain JM-791T (5LMG 28739T5CCM 8596T). The genus -
Final Report of the Thirty-Eighth Antarctic Treaty Consultative Meeting
Final Report of the Thirty-eighth Antarctic Treaty Consultative Meeting ANTARCTIC TREATY CONSULTATIVE MEETING Final Report of the Thirty-eighth Antarctic Treaty Consultative Meeting Sofi a, Bulgaria 1 - 10 June 2015 Volume I Secretariat of the Antarctic Treaty Buenos Aires 2015 Published by: Secretariat of the Antarctic Treaty Secrétariat du Traité sur l’ Antarctique Секретариат Договора об Антарктике Secretaría del Tratado Antártico Maipú 757, Piso 4 C1006ACI Ciudad Autónoma Buenos Aires - Argentina Tel: +54 11 4320 4260 Fax: +54 11 4320 4253 This book is also available from: www.ats.aq (digital version) and for purchase online. ISSN 2346-9897 ISBN 978-987-1515-98-1 Contents VOLUME I Acronyms and Abbreviations 9 PART I. FINAL REPORT 11 1. Final Report 13 2. CEP XVIII Report 111 3. Appendices 195 Outcomes of the Intersessional Contact Group on Informatiom Exchange Requirements 197 Preliminary Agenda for ATCM XXXIX, Working Groups and Allocation of Items 201 Host Country Communique 203 PART II. MEASURES, DECISIONS AND RESOLUTIONS 205 1. Measures 207 Measure 1 (2015): Antarctic Specially Protected Area No. 101 (Taylor Rookery, Mac.Robertson Land): Revised Management Plan 209 Measure 2 (2015): Antarctic Specially Protected Area No. 102 (Rookery Islands, Holme Bay, Mac.Robertson Land): Revised Management Plan 211 Measure 3 (2015): Antarctic Specially Protected Area No. 103 (Ardery Island and Odbert Island, Budd Coast, Wilkes Land, East Antarctica): Revised Management Plan 213 Measure 4 (2015): Antarctic Specially Protected Area No. 104 (Sabrina Island, Balleny Islands): Revised Management Plan 215 Measure 5 (2015): Antarctic Specially Protected Area No. 105 (Beaufort Island, McMurdo Sound, Ross Sea): Revised Management Plan 217 Measure 6 (2015): Antarctic Specially Protected Area No.